Pay0021022 (gene) Melon (Payzawat) v1

Overview
NamePay0021022
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionProtein CHROMATIN REMODELING 5 isoform X2
Locationchr04: 4606948 .. 4615131 (+)
RNA-Seq ExpressionPay0021022
SyntenyPay0021022
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTATGGTAATATTTGTTATTATATGAAATCTAATAAGTATTGTATATGTGAATTGCTATGACTATCCTGCACTTATGGTAGTCATAGATTTGTATGGAATGTTAGTTGGGTAACATTTGTTGAACTTGAATTTTAAGCATGCTCTTGGTGTTGTTAGTTATACAATATGAGTTAGGTGATATTAGTTTATTCACTAGAAGAAATATAGGCTTTAATGTCGGTTGGAAAAAATGCAAAATGAGCATTAATGTCGGTTTTGAAAAGGCGGATGTTTAATGTCGGTTTTCCACCGACATTAAAGAGTAAGCTTTAATGTCGGTTTTAAACCGACATTAAAGGTCTGCCATTTTGAAAACGGACATTAAAGGTTCATTTACATTTTAATTTTAATAATTTTATTTTGTAAAAAATAACAACCTTTAATGTCGGTTTTAAACCGACATAAAAGGTCCATTAAAATTTTTATTTTAATAATTTTATTTTGTAAAAAAATAACAAATTCTCTCTCTTACTTTACTCTTTCAATCTTCTCCCGCTCACAAACCCTTTCTTCTCCAAATGGAATCCGTCCATTTCTTCTCACATTCTCACCGGTGAATGCATTCCAATCTTCTCACGCCGTCGTCGTCGCCGTCTCACATTCTCAATCTTCTCACGCCATCACCGAATGCATTCCAAATGGAATGCCTCTCACATTCTCACCGGTGAAATCTCATTTCCCTACTTCTAAACAAAATAGCCCGCGTCTCCTTTCACATTCTCACCGGTGAAATCGCATTTCCCTCCTTCTAAACAAAATAGCCCGCGTCTCCTCTCACATTCTCACCGGTGAAATCGCATTTCCCTCCTTCTAAACAAAATAGCCCGCGTCTCTTCTCACATTCTCACCGGTGAAATCACAGTTAACATCTAACTCCGACGGCGTCCCTACTCGACGCTAAAATGCATTCGGCGACGGCGTCCCTACTCGATGCTAACATCTAACTCCAACGGTGGCAGCGGAAGCTTCATAGCAACGGTAACGGTGGAGAGAGAGGTATAATATAATGGAATCATGGAGGTCTGACTCTGTATGGCTGGCTTGCACCATCTGATGCTGCCAACATACTTCTCAAATGAGTTGTAGGACTCTAATCCATTTCTACATATGAAGAAAAGTTCTTGATGTGGCTGTGACGTTTCTAATTATTTTTCATCTATCAGGTATGAGATGAGATTCAATCCCTATGACCTTGGACCATGTAGATTTGGTTCAGAAGCTATCTTTGTTCCCTGCGTATCTGGCACCACTTCAGAAGAAGATGATGGCTACTTGATATTATTCGTACACGATGAGCATACTGGGTAACTGCTTGACACTTAAATATATTGTTAGTTATGCCATACGTATCTATATATTTGTATATATCATGTGAGTAGTAGCTTGAATACAGATGCCTTTTTTAGACATCCTAACTAGATATCCTATATCAGTTTAAACGCATTAATTCTTAAGAAAGTTGAAGTTGTACATATAGTGGGAGTTCTATAATTTTCTTGATTGATATTTTTCTTATAACTTTTGCAATTCATGAATATTCAAACTCACACACAATAGAATTTAACTCAAACCCCGTAGTAGCAGCGTTGGTATTTGCATTAAAACACAAGTAGATAGTTCTACTAAATACATGTGCTGAATCAAATTAGTTTATTTTGCTATAGAGGGTGACAATAGTTGTCATTGTTGACTGCAGAAAATCCGCAGTGAATGTTGTAGATGCAAAAACTATGTCATCTGAGCCTGTCGCAGTTGTTGAATTGCCACACAGAGTTCCATATGGGTTTCATGCCTTCTTTGTTACAGAGGTTAGTGTCAAAGTCATTTGCATTCAGTTGGATTACTAATAAATTGACGGTCTTTTGCATTATCTAAATTATCACATTCCATAAAACTTCTACCAACATGGACATTTATATAGAAAAGAACGTTCTTTTGAGTCTTGGCAGTCAAACTAAGTGCTATGCCAAAGCCTAGAAACCGTTAGTCCTTGTGTGTACACCAAATATGAAAATAGAAAGCATAATGTTTAAAGAGAAAATGTTTAAAGAGAAAATGTTTTCAGTCGGCAGCAACCTCCCTTCAGAAAAATGCTTGTCCAGGAAAGATGTCACAAGTATCACTTTAGGAGTTTGCTCTTTCCACGACTCATCCAAAGATCATAGAACTTTTACATCCACACGATTTACCTAAGAAATGGGTGTTGAGATAAATTGATGTATAAGACAAGTCGATGGGGTTCATATTTTCAACTCTTGTCAGACTATTATTGATTTTTAATCATTAACTTTTTTATAAGATGTCACAAGATTGTTGATCATATTCTTTGGACTGGGTTGTAGTTTTCTGTTGCAAGCTAGAGAATTAAAGACATGTTTGAAGTATATCTTAGTGCAAAGTGATGGTCAAACTGTGTGATTGTAGTTTTATTTCTTGTAGTATGTAAATGTTTTGGTTTTGTACTTTCATTTGATTTGTTCTAGTCCCTACATTCTAATATATGGACATAATTCCATAAAAAGCTGACATGGCACCATGTGGAAGCTGACATGATGCCATTTTTTGTTTTGTTTTTGGTTTACAGTTTGTTAGTCTTCCGTTTTTTGTTTTTGGCTTCTTTTGTTATGTGTATTTCCTTCACTAAAAAGAGAGATGAAACTAAGATAGACATCTTTGTATTGGCTAGTTTGTTCAATCGTTGTGCTCAATTTCTCCAATCATGTTTGTATGATTGAAGCTGGTTGATAAACTTTTTCCTGATTCATAATTTGAGCAGGCTCGTGAAGCTGCAATATCTGTGCAAGGGAAATCAGTTGATCTTCAGCGGAAAAAGAGTAAAGGTCCGTGGAAACTTGATGCCATGAAATTGTTTTTGACAATTGAATTTTATGTACTACATTGAATACTGTATTTATGGAAATAGTAATAGTTTATTTGTAGATGGAATTACAAAGCCATAGTTATGGAGGATTAGAAACCAAATTGTAGTATCTTGTTACCTTTTTCTATAAAAAAAAATGTTTTATGAACAATCAGCTTTCATTGAGACAAGTATAATAGGTGGCCACATAAAACTATGGCATAAAAATTACCAAAGAGCCTAAAAAATTATGATAGTTTTACAGTAGACTTTTTCATTTTGTCCATTTTGTTACTGAGAAAATAATATACAATAAAATGAGTATGGATAGTTTTGAATGAGTGAAGATTTATTGATGTTATTATCATCAGGAAGCTGAATATAAAGGAAATACTGATTATCCATTAGTTTCTTTCCACCAATAAATCTTCATTAACCATTAATCTATTTCACCAATAATGAAAGCCTAACATATTAATTAACCATTAGTTTCATTCTACCAATGAAATTAATGGTCAATTAATATTTCCTTTCTATCCTTCCAAATTTTACAATGAATTCCTTTCTTATGAAAAAAACGTAATGGTATATGAGAGTGTATAAAAAAGATTTTGTTAGTTTCTAAAAAAAAGAATAAAAAAATTACCAACACTAACTTTTGGCTGAACAAAAATTTTAGAAGGATATCGTAATAATTCAAATTGTTACAACTCAAACCTTTATATTTCTTATGAAGAATGAGGTAAATGAATACTAGTTTCCTAGTTATTATAAGAGGGGTAGATGCTTTAAGCCTCATTGTATTTTGGCCCAAAGGAAGCCTATGCGTTAAGGCTAAAACTTAGAATTCTCGTCAATCTTTTTTACTCGATGTACAGTTAACATTCTTTAATATTATAATTTTTCTTATTTCTAGTGAGTTTAAGGAAACTTGATGAACAACCTGAGTGGTTAAAAGGAGGCAAGCTTCGAGACTATCAGCTTGAGGGTTTGAATTTTCTTGTTAATAGGTATATTTGTTATTTATTTATTATTTCTAGTGAGTTTGAGGAAACTTGATGAACGGCCGGGTTTGTTTACATTCCATATTTTTTGCTTCTTTGTCATTTAAGTGATGTTGCTAATACAAAGTAGTCAGTCAAAAGAAACAACATGAAGGGCCTGTGTGTAGTATATGTGGTGTAAACGAAAGTTAATGATTTTGGCTGTTAATTCCTCCATTTTCAGGGGACCCTTTTTTTCTCCTATGAGTCCCCACAGGCTATAGAACTGTTTACTACTATGCTTGACATGTTTGTTTGCTACTGCTTAAATGGTTTATTTTGATATTGCTTGTAGAATGATTGAAGTCATCAGATTGAAAGCTAAGCGATTGTGTAGATAGTCAGGCGATCGTTGAAGGTTGAAGACTGAGAAGACGTTTAGGATTTCTTATTTAAGTCTTGTATTAGGATCTTGTTTCATGTACTATTGTAGAATGTATATATAAACACAATATTAAATTTTCATTTTGTGTATACAAATGTAAAAGATAAATATTATAGTTTCTAAAATAATATTAATTTTATTAATTTGTTGGAGCGAGAAAAAAATATTTATCTATATGGATTCAATGTTGGTTTATAAAAAATGGACAATAATACAACAATTAAATAAATATAAATTTCTAAAAATGGATAAAAACAAGTCTTTAATGTCGGTTTTAAACTGACATTATTGGCCTCTTTAATGTCGGTTTTAAAACGACATCATAGCCCAATCGACATTAAAGGGCTTCAATAACACTATCAAAGATGTCGGTTTAAAACCGACATTAAAGCCCAACCGACATTAAAGGACTTCAATAACACTATCAAAGATGTCGGTTGAAAACTGACATTAATGGTCTTTAATGTCGTTTTTAAACCGACATTAAAGGCCTTTAATAACGCTCGCAAAGATGTCGGTTGCCAAGTGACATTAAAGCCCTTTAATGTCGGTTTTAAACCGACATTAAAGGTCAGATTTCTTGTAGTGATTGCTTATCTTTTGATTTAGAATTAGTAGAAATGCTTATTAGATTTCATACATATTATTATATGAAATCTAATAAGGCTTAATTTTGGAAGTGACTTTGGAATGTGAGTATGATAATGTTTGTTATTATATGAAATCTAATCAATATTGTATATGTGAATTGCTCTGACTATTCTGCAGCTATGGTAGTCATAGATTTGTATGGAATTTTAGTTGGGTGATCTTGGTCGGCATTTGTGTTAAAGTAACGATTTCAATTTGGTATACTTAGGTACCATTACAGGACCTTATAAAGTTGTCCTTAGGTTTGTGGAAAATAGTTTTTCTAACTTTTTGCCCTAACTACTATAGGATTTAAATTGATTCATTTTGCATCAATGATGAATAAGGATTGAATTAAACTTAGAGATAGATTCTCAAAAGAGTATATTGATGGAGTTGCACAATTCATGGAAGTGGCAAAGTGTCATGTAAATAGAGAAGGACAAACAAAATGCTCGCATAAAAATTGTCGAAATTCAATGTGTCAAACTTTAGATGGAGTACAAAGGCATTTATTTGCTAATGGAATATCTCCTTCATATAGTCAATGAATTTATCATGGAGAACCAAAAAATTTAGCCCAATTTGAAAGAGTCATGACTCCTTTAGCTTCTTTAGTTGATGATGGTAGTAGATGATAGATTAAGGGAACAACCTACTACTGAGAATGATGATAATGAGTTGTTCAACCTTTTAAATTATTTGCAAGGACCAATGAGAGAAGGGGCATATGATGAGGATGAAGAAGACTTTGGAAATGAGATGTATGAGAATAGTGAAAAAGGTATAATACAAACATTTTTTAGGAGTTGATGGATGAAGCGTGTAATCCATTATACTCGGGTTGTACCAAATTTTCTTAATTAAGCTTCTTGGTGAAATTGATGCATGTTAATGTTCTCAATAATTAGGGTAACAGATCCTTTGATATGTTACTAAGTTTGTTAAAAGATGTATTTCCAATTGATACATGTATACCTAATTTTTTTTATGAAGCTAAAAGAAAACTACACGACTTAGGACTAGGATATGATTCTATTAATGCATGCAAGTATGACCGCATTTTATTTTGGAAAAATATTCTAATTATCAAAGTTGTCTAGTGTGGGGTGAGTTTCGATACAAAAGAAAGGATGGAAAGGCAAAAATATCCCAAACAAGATTTTACGTCATGTTCCATTGATATTGAGGTTGAAACGATGTTTTCGTCGAAATACATTGCTTCTGAAATGCAATGGCATAAGGACAAACGAGTTGAAACTAATGGTGTGTTGCGACATCCAAATGATGTTGAAGTGTGGAAATGTTTTGATAGAAAGTTTCCTTAATTCGCTTCAAACCCAAAGAACGTTCAATTAGCTTTAGGTTCAGATGGATTTAATCCATTTGGGAATATGAGTAATGCATACAACAAGTGGCCCGTTATGCTTATTCCTTATAATTTGCCTCCATGAAATCGCGTGAAGGAATCCAATTTTTTCATGTCTTTACTTATACAGGGAAGAAGTTCCCTTGAAAAGAAATTGACATGTATTTACAACCGTTGATTAAAGAGTTGAAGGAGTTGTGGAATGATGATGTATGCACTTACGATTACATGAGCAGGGAATTCTTTCAATTACGTGCATGTTTATTGTGGACCATTAATGATTTTCCTACTTACGGAGACTTGTGAGGATGGAGTACCAAAGGTTATCAAGCATGTCCCACTTGTAAAGAACATAGATCTTCGTTTAAGATAAGAGGAAAAATCTTTTTCATGGGTCATCAACGTTACCTTCCATCTAACCACAGTTGGCGTAAGAGCAAGCAACATGATGGCAAATTAGAGCGTAGACCTCCACCCAATGTGATGAATGGAGATAAGATCCTAGAACAAGTCAATTCATTAAACTTTCCAGTACTAAGTAAGCATCCATCCAAACAAGACAAGAAAAGAAAAAGAACCATTAACTGAAACAAAAAAACTATATTTTTTTAGTTGCCTTATTGGTCTAAAATAATGTTAAGATATAAGTTAGATGTCATGCATATTGAAAAAAAATTATGCAATAACTTGCTTGGAACTTTGATGAATATTGATGGAAAAATAAAAGACATAATAAATGCTCATTTGGACCTTGAAGATTTGAATATACGGAAGGACTTACACTTACGAAAGGAACTAAATTTGTAAAACCACATGTTGCATATACTTTCACTGCAAGTGAGAAGATAACTTTTTGTAAGTTATAGAAATCAGTCAAATTCCCTAATGGATTCATCTCAAACATATCATGATGTGTTAGTGTGAATGATGGAAAAATATGGGGGTTGAAGACTCACGACTCGCATATTCTACTCCAACGCATATTCTTATTGGTGTTTGAGCTCATCTAAGAAAGGATGTTTATACACCTATTGTGGAGTTATGTAAGTTATATTGTATCATATGTTCGTAATTTTATACTAACCCTTGTATATAATATTTACCATCTAATACGTTTGTAATATAGGTCGCAATACAAAAGGAGATAAGAAAATCATTAGAAGATGGATCTGAGCCGGATGGAAGGCAACCCCCAATGTAGCAACATGCACATCGACCCGTGTATTTGAGAAAGATATTGTGGACAAGTATGAAAAGCTCAGCGAAGGTGATCAACTTAAAAGAGGAAAATGTCACGTTGAAGTCAACAATTTCGGGATTCCAAGATCAATTGACTAACATCACGAGACAGCTTGCTACGCAACAAAGGCAATAAAGTGGACTTTCAGACAATTAGGTACATTATAACAACTTTGAGTTATGGTTAATGGAGTTAGGAATTTAATTGTATTGTTGTATGGTTATCCTGCAGTTATAGTACCAAAGTTTAAACATTTTAATGTAGTTAGCTAGTTTGTCTTGCTTCTTTGTAGTTTGCAAGAATGATTTATTATGTGGGCCTTAGGACACATTTGTAGTTTTTGTGGTTTGGTATATGAGTGTTCTAAAAATTTGAAGGAGGGGGGAGTTTGAATGCATCCAACTCTATGTTCAAATTATATGCTATTTTCATACTTGGTCACTTGTTGCTACATTGTATTTTGTCACTTTATGTTGCAACTTTGTCACATTTTTGTTTCTAAATTGTCACTTGTATTTTTTTTTCCTATTTCAGGTTTATATGTGTGATCTCGAACATCGGTTCTCGGAGATTGGGAGAAGATTTTGAATTAGGATATATTTTAGCTAGGTGA

mRNA sequence

ATGAGTATGTCGGCAGCAACCTCCCTTCAGAAAAATGCTTGTCCAGGAAAGATGTCACAAGCTCGTGAAGCTGCAATATCTGTGCAAGGGAAATCAGTTGATCTTCAGCGGAAAAAGAGTAAAGTGAGTTTAAGGAAACTTGATGAACAACCTGAGTGGTTAAAAGGAGGCAAGCTTCGAGACTATCAGCTTGAGGGTTTGAATTTTCTTGTTAATAGGTTTATATGTGTGATCTCGAACATCGGTTCTCGGAGATTGGGAGAAGATTTTGAATTAGGATATATTTTAGCTAGGTGA

Coding sequence (CDS)

ATGAGTATGTCGGCAGCAACCTCCCTTCAGAAAAATGCTTGTCCAGGAAAGATGTCACAAGCTCGTGAAGCTGCAATATCTGTGCAAGGGAAATCAGTTGATCTTCAGCGGAAAAAGAGTAAAGTGAGTTTAAGGAAACTTGATGAACAACCTGAGTGGTTAAAAGGAGGCAAGCTTCGAGACTATCAGCTTGAGGGTTTGAATTTTCTTGTTAATAGGTTTATATGTGTGATCTCGAACATCGGTTCTCGGAGATTGGGAGAAGATTTTGAATTAGGATATATTTTAGCTAGGTGA

Protein sequence

MSMSAATSLQKNACPGKMSQAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRFICVISNIGSRRLGEDFELGYILAR
Homology
[Close]
BLAST of Pay0021022 vs. ExPASy Swiss-Prot
Match: F4IV99 (Protein CHROMATIN REMODELING 5 OS=Arabidopsis thaliana OX=3702 GN=CHR5 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.8e-15
Identity = 41/56 (73.21%), Postives = 47/56 (83.93%), Query Frame = 0 

Query: 20  QAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRFI 76
           +ARE +I+VQGK V+ QR K K SLRKLDEQPEWL GG LRDYQLEGLNFLVN ++
Sbjct: 586 KAREVSIAVQGKMVEQQRTKGKASLRKLDEQPEWLIGGTLRDYQLEGLNFLVNSWL 641

[Close]
BLAST of Pay0021022 vs. ExPASy TrEMBL
Match: A0A5A7SH43 (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold417G00590 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.5e-20
Identity = 56/61 (91.80%), Postives = 59/61 (96.72%), Query Frame = 0 

Query: 18  MSQAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRFICV 77
           +++AREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNR I V
Sbjct: 118 VTEAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRMIEV 177

Query: 78  I 79
           I
Sbjct: 178 I 178

[Close]
BLAST of Pay0021022 vs. ExPASy TrEMBL
Match: A0A5D3D8D7 (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G001000 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.3e-19
Identity = 55/61 (90.16%), Postives = 58/61 (95.08%), Query Frame = 0 

Query: 18  MSQAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRFICV 77
           +++AREAAISVQ KSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNR I V
Sbjct: 118 VTEAREAAISVQEKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRMIEV 177

Query: 78  I 79
           I
Sbjct: 178 I 178

[Close]
BLAST of Pay0021022 vs. ExPASy TrEMBL
Match: A0A5A7VIB0 (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40G001470 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.7e-19
Identity = 54/61 (88.52%), Postives = 57/61 (93.44%), Query Frame = 0 

Query: 18  MSQAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRFICV 77
           +++ARE AISVQGKSVDLQ KKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNR I V
Sbjct: 125 VTEARETAISVQGKSVDLQWKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRMIEV 184

Query: 78  I 79
           I
Sbjct: 185 I 185

[Close]
BLAST of Pay0021022 vs. ExPASy TrEMBL
Match: A0A5A7V2H3 (Protein CHROMATIN REMODELING 5 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G001580 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 8.2e-19
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0 

Query: 20  QAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVN 73
           +AREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVN
Sbjct: 617 KAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVN 669

[Close]
BLAST of Pay0021022 vs. ExPASy TrEMBL
Match: A0A5A7STC6 (Protein CHROMATIN REMODELING 5 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43053G00790 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.4e-18
Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0 

Query: 21  AREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNR 74
           AREAAIS QGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNR
Sbjct: 99  AREAAISGQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNR 151

[Close]
BLAST of Pay0021022 vs. NCBI nr
Match: KAA0025460.1 (carotenoid 9,10(9',10')-cleavage dioxygenase 1 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 108.6 bits (270), Expect = 3.1e-20
Identity = 56/61 (91.80%), Postives = 59/61 (96.72%), Query Frame = 0 

Query: 18  MSQAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRFICV 77
           +++AREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNR I V
Sbjct: 118 VTEAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRMIEV 177

Query: 78  I 79
           I
Sbjct: 178 I 178

[Close]
BLAST of Pay0021022 vs. NCBI nr
Match: KAA0041555.1 (carotenoid 9,10(9',10')-cleavage dioxygenase 1 isoform X2 [Cucumis melo var. makuwa] >TYK19699.1 carotenoid 9,10(9',10')-cleavage dioxygenase 1 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 105.5 bits (262), Expect = 2.6e-19
Identity = 55/61 (90.16%), Postives = 58/61 (95.08%), Query Frame = 0 

Query: 18  MSQAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRFICV 77
           +++AREAAISVQ KSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNR I V
Sbjct: 118 VTEAREAAISVQEKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRMIEV 177

Query: 78  I 79
           I
Sbjct: 178 I 178

[Close]
BLAST of Pay0021022 vs. NCBI nr
Match: KAA0067468.1 (carotenoid 9,10(9',10')-cleavage dioxygenase 1 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 104.0 bits (258), Expect = 7.6e-19
Identity = 54/61 (88.52%), Postives = 57/61 (93.44%), Query Frame = 0 

Query: 18  MSQAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRFICV 77
           +++ARE AISVQGKSVDLQ KKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNR I V
Sbjct: 125 VTEARETAISVQGKSVDLQWKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRMIEV 184

Query: 78  I 79
           I
Sbjct: 185 I 185

[Close]
BLAST of Pay0021022 vs. NCBI nr
Match: XP_038901513.1 (protein CHROMATIN REMODELING 5 isoform X2 [Benincasa hispida])

HSP 1 Score: 102.8 bits (255), Expect = 1.7e-18
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0 

Query: 20  QAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVN 73
           +AREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVN
Sbjct: 586 KAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVN 638

[Close]
BLAST of Pay0021022 vs. NCBI nr
Match: KAA0061778.1 (protein CHROMATIN REMODELING 5 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 102.8 bits (255), Expect = 1.7e-18
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0 

Query: 20  QAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVN 73
           +AREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVN
Sbjct: 617 KAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVN 669

[Close]
BLAST of Pay0021022 vs. TAIR 10
Match: AT2G13370.1 (chromatin remodeling 5 )

HSP 1 Score: 83.2 bits (204), Expect = 1.3e-16
Identity = 41/56 (73.21%), Postives = 47/56 (83.93%), Query Frame = 0 

Query: 20  QAREAAISVQGKSVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNRFI 76
           +ARE +I+VQGK V+ QR K K SLRKLDEQPEWL GG LRDYQLEGLNFLVN ++
Sbjct: 586 KAREVSIAVQGKMVEQQRTKGKASLRKLDEQPEWLIGGTLRDYQLEGLNFLVNSWL 641

[Close]
BLAST of Pay0021022 vs. TAIR 10
Match: AT3G06010.1 (Homeotic gene regulator )

HSP 1 Score: 40.4 bits (93), Expect = 9.6e-04
Identity = 19/42 (45.24%), Postives = 29/42 (69.05%), Query Frame = 0 

Query: 46  KLDEQPEWLKGGKLRDYQLEGLNFLVNRFICVISNIGSRRLG 88
           K+ EQP  L+GG+LR YQLEGL ++V+ F   ++ I +  +G
Sbjct: 390 KVTEQPSLLEGGELRSYQLEGLQWMVSLFNNNLNGILADEMG 431

The following BLAST results are available for this feature:
BLAST of Pay0021022 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
F4IV991.8e-1573.21Protein CHROMATIN REMODELING 5 OS=Arabidopsis thaliana OX=3702 GN=CHR5 PE=1 SV=1[more]
BLAST of Pay0021022 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SH431.5e-2091.80Carotenoid 9,10(9',10')-cleavage dioxygenase 1 isoform X2 OS=Cucumis melo var. m... [more]
A0A5D3D8D71.3e-1990.16Carotenoid 9,10(9',10')-cleavage dioxygenase 1 isoform X2 OS=Cucumis melo var. m... [more]
A0A5A7VIB03.7e-1988.52Carotenoid 9,10(9',10')-cleavage dioxygenase 1 isoform X2 OS=Cucumis melo var. m... [more]
A0A5A7V2H38.2e-1998.11Protein CHROMATIN REMODELING 5 isoform X2 OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A5A7STC61.4e-1898.11Protein CHROMATIN REMODELING 5 isoform X1 OS=Cucumis melo var. makuwa OX=1194695... [more]
BLAST of Pay0021022 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0025460.13.1e-2091.80carotenoid 9,10(9',10')-cleavage dioxygenase 1 isoform X2 [Cucumis melo var. mak... [more]
KAA0041555.12.6e-1990.16carotenoid 9,10(9',10')-cleavage dioxygenase 1 isoform X2 [Cucumis melo var. mak... [more]
KAA0067468.17.6e-1988.52carotenoid 9,10(9',10')-cleavage dioxygenase 1 isoform X2 [Cucumis melo var. mak... [more]
XP_038901513.11.7e-1898.11protein CHROMATIN REMODELING 5 isoform X2 [Benincasa hispida][more]
KAA0061778.11.7e-1898.11protein CHROMATIN REMODELING 5 isoform X2 [Cucumis melo var. makuwa][more]
BLAST of Pay0021022 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G13370.11.3e-1673.21chromatin remodeling 5 [more]
AT3G06010.19.6e-0445.24Homeotic gene regulator [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 26..83
e-value: 2.3E-6
score: 28.5
NoneNo IPR availablePANTHERPTHR45623:SF14CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1coord: 20..74
NoneNo IPR availablePANTHERPTHR45623CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATEDcoord: 20..74

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0021022.1Pay0021022.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen