Pay0020958 (gene) Melon (Payzawat) v1

Overview


Name	Pay0020958
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Nuclear transcription factor Y subunit B-4
Location	chr02: 739680 .. 740108 (+)
RNA-Seq Expression	Pay0020958
Synteny	Pay0020958

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAACCATAATAATGGGGATGAGTTTCTTGAGCTACCAATTGCCAATGTTGAGAGAATAATGAAGAAGATAATTCCACAAAAGGGGAAGATTTCAAAAGAAGCCAAGAAGACAATGCAAGAATGTGCAAATGAGTTCATTAGCTTTGTAACAAGTGAAGCAGCACAAAGATGTCACTATGAGAATAGAAGAACTCTCAATGGTGATGATATTTGTTGGGCCTTTGCTTCTTCTGGTTTAGATAATTATGCTGAGGTTTTTGCTAAGTACTTGCTTAAGTATAGAGAAGTTGAAAGAATCAAGGTTGATGAATATAAATGCAAAATTACTCAACGACTACTACCACAAGATGATGATGATAAAGAACAAGAAGATAATCATAGATCTATTGATGGAGAGATCGGTGAAACCTCTTCACCAAATTAG

mRNA sequence

ATGGAAAACCATAATAATGGGGATGAGTTTCTTGAGCTACCAATTGCCAATGTTGAGAGAATAATGAAGAAGATAATTCCACAAAAGGGGAAGATTTCAAAAGAAGCCAAGAAGACAATGCAAGAATGTGCAAATGAGTTCATTAGCTTTGTAACAAGTGAAGCAGCACAAAGATGTCACTATGAGAATAGAAGAACTCTCAATGGTGATGATATTTGTTGGGCCTTTGCTTCTTCTGGTTTAGATAATTATGCTGAGGTTTTTGCTAAGTACTTGCTTAAGTATAGAGAAGTTGAAAGAATCAAGGTTGATGAATATAAATGCAAAATTACTCAACGACTACTACCACAAGATGATGATGATAAAGAACAAGAAGATAATCATAGATCTATTGATGGAGAGATCGGTGAAACCTCTTCACCAAATTAG

Coding sequence (CDS)

ATGGAAAACCATAATAATGGGGATGAGTTTCTTGAGCTACCAATTGCCAATGTTGAGAGAATAATGAAGAAGATAATTCCACAAAAGGGGAAGATTTCAAAAGAAGCCAAGAAGACAATGCAAGAATGTGCAAATGAGTTCATTAGCTTTGTAACAAGTGAAGCAGCACAAAGATGTCACTATGAGAATAGAAGAACTCTCAATGGTGATGATATTTGTTGGGCCTTTGCTTCTTCTGGTTTAGATAATTATGCTGAGGTTTTTGCTAAGTACTTGCTTAAGTATAGAGAAGTTGAAAGAATCAAGGTTGATGAATATAAATGCAAAATTACTCAACGACTACTACCACAAGATGATGATGATAAAGAACAAGAAGATAATCATAGATCTATTGATGGAGAGATCGGTGAAACCTCTTCACCAAATTAG

Protein sequence

MENHNNGDEFLELPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHYENRRTLNGDDICWAFASSGLDNYAEVFAKYLLKYREVERIKVDEYKCKITQRLLPQDDDDKEQEDNHRSIDGEIGETSSPN

Homology

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BLAST of Pay0020958 vs. ExPASy Swiss-Prot
Match: O04027 (Nuclear transcription factor Y subunit B-4 OS=Arabidopsis thaliana OX=3702 GN=NFYB4 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-28
Identity = 67/123 (54.47%), Postives = 86/123 (69.92%), Query Frame = 0


Query: 8   DEFLELPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHYENRRTL 67
           DE   LPIANV R+MK+I+P   KISKEAK+T+QECA EFISFVT EA+++CH ENR+T+
Sbjct: 3   DEDRLLPIANVGRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHRENRKTV 62

Query: 68  NGDDICWAFASSGLDNYAEVFAKYLLKYREVERIKVDEYKCKITQRLLPQDDDDKEQEDN 127
           NGDDI WA ++ GLDNYA+   ++L KYRE ER + +  K          +D   E+E N
Sbjct: 63  NGDDIWWALSTLGLDNYADAVGRHLHKYREAERERTEHNK--------GSNDSGNEKETN 117

Query: 128 HRS 131
            RS
Sbjct: 123 TRS 117

[Close]

BLAST of Pay0020958 vs. ExPASy Swiss-Prot
Match: O82248 (Nuclear transcription factor Y subunit B-5 OS=Arabidopsis thaliana OX=3702 GN=NFYB5 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 8.7e-27
Identity = 57/94 (60.64%), Postives = 71/94 (75.53%), Query Frame = 0


Query: 13  LPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHYENRRTLNGDDI 72
           LPIANV RIMK I+P   K+SKEAK+TMQEC +EFISFVT EA+ +CH E R+T+NGDDI
Sbjct: 56  LPIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDI 115

Query: 73  CWAFASSGLDNYAEVFAKYLLKYREVERIKVDEY 107
           CWA A+ G D+YA    KYL +YR +E  K + +
Sbjct: 116 CWAMANLGFDDYAAQLKKYLHRYRVLEGEKPNHH 149

[Close]

BLAST of Pay0020958 vs. ExPASy Swiss-Prot
Match: Q9SIT9 (Nuclear transcription factor Y subunit B-7 OS=Arabidopsis thaliana OX=3702 GN=NFYB7 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.6e-25
Identity = 61/126 (48.41%), Postives = 84/126 (66.67%), Query Frame = 0


Query: 3   NHNNGDEFLELPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHYE 62
           N+NN ++   LPIANV RIMKK++P  GKISK+AK+T+QEC +EFISFVT EA+ +C  E
Sbjct: 31  NNNNKEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQRE 90

Query: 63  NRRTLNGDDICWAFASSGLDNYAEVFAKYLLKYREVERIKVDEYKCKITQRLLPQDDDDK 122
            R+T+NGDDI WA  + G ++Y      YL KYR+ E  KV+  K    Q+   Q     
Sbjct: 91  KRKTINGDDIIWAITTLGFEDYVAPLKVYLCKYRDTEGEKVNSPK----QQQQRQQQQQI 150

Query: 123 EQEDNH 129
           +Q+++H
Sbjct: 151 QQQNHH 152

[Close]

BLAST of Pay0020958 vs. ExPASy Swiss-Prot
Match: Q60EQ4 (Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB3 PE=1 SV=2)

HSP 1 Score: 115.5 bits (288), Expect = 4.8e-25
Identity = 52/87 (59.77%), Postives = 68/87 (78.16%), Query Frame = 0


Query: 13  LPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHYENRRTLNGDDI 72
           LPIAN+ RIMKK IP  GKI+K+AK+T+QEC +EFISF+TSEA+ +C  E R+T+NGDD+
Sbjct: 43  LPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDL 102

Query: 73  CWAFASSGLDNYAEVFAKYLLKYREVE 100
            WA A+ G ++Y E    YL KYRE+E
Sbjct: 103 LWAMATLGFEDYIEPLKVYLQKYREME 129

[Close]

BLAST of Pay0020958 vs. ExPASy Swiss-Prot
Match: P25209 (Nuclear transcription factor Y subunit B OS=Zea mays OX=4577 GN=NFY2 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 4.8e-25
Identity = 52/87 (59.77%), Postives = 68/87 (78.16%), Query Frame = 0


Query: 13  LPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHYENRRTLNGDDI 72
           LPIAN+ RIMKK IP  GKI+K+AK+T+QEC +EFISF+TSEA+ +C  E R+T+NGDD+
Sbjct: 36  LPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDL 95

Query: 73  CWAFASSGLDNYAEVFAKYLLKYREVE 100
            WA A+ G ++Y E    YL KYRE+E
Sbjct: 96  LWAMATLGFEDYIEPLKVYLQKYREME 122

[Close]

BLAST of Pay0020958 vs. ExPASy TrEMBL
Match: A0A5A7U6S7 (Nuclear transcription factor Y subunit B-4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold761G00150 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.4e-74
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MENHNNGDEFLELPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCH 60
           MENHNNGDEFLELPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCH
Sbjct: 1   MENHNNGDEFLELPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCH 60

Query: 61  YENRRTLNGDDICWAFASSGLDNYAEVFAKYLLKYREVERIKVDEYKCKITQRLLPQDDD 120
           YENRRTLNGDDICWAFASSGLDNYAEVFAKYLLKYREVERIKVDEYKCKITQRLLPQDDD
Sbjct: 61  YENRRTLNGDDICWAFASSGLDNYAEVFAKYLLKYREVERIKVDEYKCKITQRLLPQDDD 120

Query: 121 DKEQEDNHRSIDGEIGETSSPN 143
           DKEQEDNHRSIDGEIGETSSPN
Sbjct: 121 DKEQEDNHRSIDGEIGETSSPN 142

[Close]

BLAST of Pay0020958 vs. ExPASy TrEMBL
Match: A0A5D3CG76 (Nuclear transcription factor Y subunit B-4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003890 PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 2.9e-73
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MENHNNGDEFLELPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCH 60
           MENHNNGDEFLELPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCH
Sbjct: 1   MENHNNGDEFLELPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCH 60

Query: 61  YENRRTLNGDDICWAFASSGLDNYAEVFAKYLLKYREVERIKVDEYKCKITQRLLPQDDD 120
           YENRRTLNGDDICWAFASSGLDNYAEVFAKYL KYREVERIKVDEYKCKITQRLLPQDDD
Sbjct: 61  YENRRTLNGDDICWAFASSGLDNYAEVFAKYLHKYREVERIKVDEYKCKITQRLLPQDDD 120

Query: 121 DKEQEDNHRSIDGEIGETSSPN 143
           DKEQEDNHRSIDGEIGETSSPN
Sbjct: 121 DKEQEDNHRSIDGEIGETSSPN 142

[Close]

BLAST of Pay0020958 vs. ExPASy TrEMBL
Match: A0A1S3BRX1 (nuclear transcription factor Y subunit B-4 OS=Cucumis melo OX=3656 GN=LOC103492518 PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 2.9e-73
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MENHNNGDEFLELPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCH 60
           MENHNNGDEFLELPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCH
Sbjct: 1   MENHNNGDEFLELPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCH 60

Query: 61  YENRRTLNGDDICWAFASSGLDNYAEVFAKYLLKYREVERIKVDEYKCKITQRLLPQDDD 120
           YENRRTLNGDDICWAFASSGLDNYAEVFAKYL KYREVERIKVDEYKCKITQRLLPQDDD
Sbjct: 61  YENRRTLNGDDICWAFASSGLDNYAEVFAKYLHKYREVERIKVDEYKCKITQRLLPQDDD 120

Query: 121 DKEQEDNHRSIDGEIGETSSPN 143
           DKEQEDNHRSIDGEIGETSSPN
Sbjct: 121 DKEQEDNHRSIDGEIGETSSPN 142

[Close]

BLAST of Pay0020958 vs. ExPASy TrEMBL
Match: A0A0A0LW12 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G569510 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 5.1e-46
Identity = 105/142 (73.94%), Postives = 111/142 (78.17%), Query Frame = 0


Query: 1   MENHNNGDEFLELPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCH 60
           MENH+NGDEFLELPIANVERIMKKIIPQKGKISKEAKK MQECANEFISFVTSEAAQRC 
Sbjct: 1   MENHHNGDEFLELPIANVERIMKKIIPQKGKISKEAKKKMQECANEFISFVTSEAAQRCQ 60

Query: 61  YENRRTLNGDDICWAFASSGLDNYAEVFAKYLLKYREVERIKVDEYKCKITQRLLPQDDD 120
            ENRRTLNGDDI WAF S GLDNYAE  +K+LL +REVERIKVDE               
Sbjct: 61  NENRRTLNGDDIYWAFGSLGLDNYAEASSKFLLNFREVERIKVDE--------------- 120

Query: 121 DKEQEDNHRSIDGEIGETSSPN 143
             + +DNH    GEIGETSSPN
Sbjct: 121 KHKSKDNH----GEIGETSSPN 123

[Close]

BLAST of Pay0020958 vs. ExPASy TrEMBL
Match: A0A6J1HUN8 (nuclear transcription factor Y subunit B-4-like OS=Cucurbita maxima OX=3661 GN=LOC111467987 PE=3 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 7.9e-39
Identity = 92/142 (64.79%), Postives = 106/142 (74.65%), Query Frame = 0


Query: 5   NNGDEFLELPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHYENR 64
           NNGDE L+LPIANV R+MKKI+PQK KISKEAK TMQECA EFISFVTSEAA++CH +NR
Sbjct: 4   NNGDE-LQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNR 63

Query: 65  RTLNGDDICWAFASSGLDNYAEVFAKYLLKYREVERIKVDEYKCKIT-------QRLLPQ 124
           RTLNGDDICWAF S GLDNYAE  AKYLLKYR++ERI   ++K  I        Q    +
Sbjct: 64  RTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDIERINA-QFKTNIAREQQEHGQEREQE 123

Query: 125 DDDDKEQEDNHRSIDGEIGETS 140
            + ++EQE       GEIGETS
Sbjct: 124 QEQEQEQEQELEFYHGEIGETS 143

[Close]

BLAST of Pay0020958 vs. NCBI nr
Match: KAA0050890.1 (nuclear transcription factor Y subunit B-4 [Cucumis melo var. makuwa])

HSP 1 Score: 287.0 bits (733), Expect = 9.1e-74
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MENHNNGDEFLELPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCH 60
           MENHNNGDEFLELPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCH
Sbjct: 1   MENHNNGDEFLELPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCH 60

Query: 61  YENRRTLNGDDICWAFASSGLDNYAEVFAKYLLKYREVERIKVDEYKCKITQRLLPQDDD 120
           YENRRTLNGDDICWAFASSGLDNYAEVFAKYLLKYREVERIKVDEYKCKITQRLLPQDDD
Sbjct: 61  YENRRTLNGDDICWAFASSGLDNYAEVFAKYLLKYREVERIKVDEYKCKITQRLLPQDDD 120

Query: 121 DKEQEDNHRSIDGEIGETSSPN 143
           DKEQEDNHRSIDGEIGETSSPN
Sbjct: 121 DKEQEDNHRSIDGEIGETSSPN 142

[Close]

BLAST of Pay0020958 vs. NCBI nr
Match: XP_008451142.1 (PREDICTED: nuclear transcription factor Y subunit B-4 [Cucumis melo] >TYK10242.1 nuclear transcription factor Y subunit B-4 [Cucumis melo var. makuwa])

HSP 1 Score: 284.3 bits (726), Expect = 5.9e-73
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MENHNNGDEFLELPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCH 60
           MENHNNGDEFLELPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCH
Sbjct: 1   MENHNNGDEFLELPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCH 60

Query: 61  YENRRTLNGDDICWAFASSGLDNYAEVFAKYLLKYREVERIKVDEYKCKITQRLLPQDDD 120
           YENRRTLNGDDICWAFASSGLDNYAEVFAKYL KYREVERIKVDEYKCKITQRLLPQDDD
Sbjct: 61  YENRRTLNGDDICWAFASSGLDNYAEVFAKYLHKYREVERIKVDEYKCKITQRLLPQDDD 120

Query: 121 DKEQEDNHRSIDGEIGETSSPN 143
           DKEQEDNHRSIDGEIGETSSPN
Sbjct: 121 DKEQEDNHRSIDGEIGETSSPN 142

[Close]

BLAST of Pay0020958 vs. NCBI nr
Match: XP_004135780.1 (nuclear transcription factor Y subunit B-4 [Cucumis sativus])

HSP 1 Score: 193.7 bits (491), Expect = 1.1e-45
Identity = 105/142 (73.94%), Postives = 111/142 (78.17%), Query Frame = 0


Query: 1   MENHNNGDEFLELPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCH 60
           MENH+NGDEFLELPIANVERIMKKIIPQKGKISKEAKK MQECANEFISFVTSEAAQRC 
Sbjct: 1   MENHHNGDEFLELPIANVERIMKKIIPQKGKISKEAKKKMQECANEFISFVTSEAAQRCQ 60

Query: 61  YENRRTLNGDDICWAFASSGLDNYAEVFAKYLLKYREVERIKVDEYKCKITQRLLPQDDD 120
            ENRRTLNGDDI WAF S GLDNYAE  +K+LL +REVERIKVDE               
Sbjct: 61  NENRRTLNGDDIYWAFGSLGLDNYAEASSKFLLNFREVERIKVDE--------------- 120

Query: 121 DKEQEDNHRSIDGEIGETSSPN 143
             + +DNH    GEIGETSSPN
Sbjct: 121 KHKSKDNH----GEIGETSSPN 123

[Close]

BLAST of Pay0020958 vs. NCBI nr
Match: KAE8653368.1 (hypothetical protein Csa_006911 [Cucumis sativus])

HSP 1 Score: 185.3 bits (469), Expect = 3.7e-43
Identity = 92/105 (87.62%), Postives = 96/105 (91.43%), Query Frame = 0


Query: 1   MENHNNGDEFLELPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCH 60
           MENH+NGDEFLELPIANVERIMKKIIPQKGKISKEAKK MQECANEFISFVTSEAAQRC 
Sbjct: 1   MENHHNGDEFLELPIANVERIMKKIIPQKGKISKEAKKKMQECANEFISFVTSEAAQRCQ 60

Query: 61  YENRRTLNGDDICWAFASSGLDNYAEVFAKYLLKYREVERIKVDE 106
            ENRRTLNGDDI WAF S GLDNYAE  +K+LL +REVERIKVDE
Sbjct: 61  NENRRTLNGDDIYWAFGSLGLDNYAEASSKFLLNFREVERIKVDE 105

[Close]

BLAST of Pay0020958 vs. NCBI nr
Match: XP_023546470.1 (nuclear transcription factor Y subunit B-4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 172.9 bits (437), Expect = 1.9e-39
Identity = 89/137 (64.96%), Postives = 106/137 (77.37%), Query Frame = 0


Query: 5   NNGDEFLELPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHYENR 64
           NNGDE L+LPIANV R+MKKI+PQK KISKEAK TMQECA EFISFVTSEAA++CH +NR
Sbjct: 4   NNGDE-LQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNR 63

Query: 65  RTLNGDDICWAFASSGLDNYAEVFAKYLLKYREVERIKVDEYKCKITQRLLPQDDDDKEQ 124
           RTLNGDDICWAF S GLDNYAE  AKYLLKYR+VERI   ++K  I       D D +++
Sbjct: 64  RTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDVERINA-QFKTNIAPEQQRHDQDQEQK 123

Query: 125 EDNHRSIDGEIGETSSP 142
           ++  + ++   GETS P
Sbjct: 124 QEQEQELEFNHGETSEP 138

[Close]

BLAST of Pay0020958 vs. TAIR 10
Match: AT1G09030.1 (nuclear factor Y, subunit B4 )

HSP 1 Score: 127.5 bits (319), Expect = 8.6e-30
Identity = 67/123 (54.47%), Postives = 86/123 (69.92%), Query Frame = 0


Query: 8   DEFLELPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHYENRRTL 67
           DE   LPIANV R+MK+I+P   KISKEAK+T+QECA EFISFVT EA+++CH ENR+T+
Sbjct: 3   DEDRLLPIANVGRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHRENRKTV 62

Query: 68  NGDDICWAFASSGLDNYAEVFAKYLLKYREVERIKVDEYKCKITQRLLPQDDDDKEQEDN 127
           NGDDI WA ++ GLDNYA+   ++L KYRE ER + +  K          +D   E+E N
Sbjct: 63  NGDDIWWALSTLGLDNYADAVGRHLHKYREAERERTEHNK--------GSNDSGNEKETN 117

Query: 128 HRS 131
            RS
Sbjct: 123 TRS 117

[Close]

BLAST of Pay0020958 vs. TAIR 10
Match: AT2G47810.1 (nuclear factor Y, subunit B5 )

HSP 1 Score: 121.3 bits (303), Expect = 6.2e-28
Identity = 57/94 (60.64%), Postives = 71/94 (75.53%), Query Frame = 0


Query: 13  LPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHYENRRTLNGDDI 72
           LPIANV RIMK I+P   K+SKEAK+TMQEC +EFISFVT EA+ +CH E R+T+NGDDI
Sbjct: 56  LPIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDI 115

Query: 73  CWAFASSGLDNYAEVFAKYLLKYREVERIKVDEY 107
           CWA A+ G D+YA    KYL +YR +E  K + +
Sbjct: 116 CWAMANLGFDDYAAQLKKYLHRYRVLEGEKPNHH 149

[Close]

BLAST of Pay0020958 vs. TAIR 10
Match: AT2G13570.1 (nuclear factor Y, subunit B7 )

HSP 1 Score: 117.1 bits (292), Expect = 1.2e-26
Identity = 61/126 (48.41%), Postives = 84/126 (66.67%), Query Frame = 0


Query: 3   NHNNGDEFLELPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHYE 62
           N+NN ++   LPIANV RIMKK++P  GKISK+AK+T+QEC +EFISFVT EA+ +C  E
Sbjct: 31  NNNNKEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQRE 90

Query: 63  NRRTLNGDDICWAFASSGLDNYAEVFAKYLLKYREVERIKVDEYKCKITQRLLPQDDDDK 122
            R+T+NGDDI WA  + G ++Y      YL KYR+ E  KV+  K    Q+   Q     
Sbjct: 91  KRKTINGDDIIWAITTLGFEDYVAPLKVYLCKYRDTEGEKVNSPK----QQQQRQQQQQI 150

Query: 123 EQEDNH 129
           +Q+++H
Sbjct: 151 QQQNHH 152

[Close]

BLAST of Pay0020958 vs. TAIR 10
Match: AT3G53340.1 (nuclear factor Y, subunit B10 )

HSP 1 Score: 113.2 bits (282), Expect = 1.7e-25
Identity = 50/87 (57.47%), Postives = 69/87 (79.31%), Query Frame = 0


Query: 13  LPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHYENRRTLNGDDI 72
           LPIAN+ RIMK+ +P  GKI+K+AK+TMQEC +EFISFVTSEA+ +C  E R+T+NGDD+
Sbjct: 34  LPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISFVTSEASDKCQREKRKTINGDDL 93

Query: 73  CWAFASSGLDNYAEVFAKYLLKYREVE 100
            WA A+ G ++Y +    YL++YRE+E
Sbjct: 94  LWAMATLGFEDYIDPLKVYLMRYREME 120

[Close]

BLAST of Pay0020958 vs. TAIR 10
Match: AT4G14540.1 (nuclear factor Y, subunit B3 )

HSP 1 Score: 112.5 bits (280), Expect = 2.9e-25
Identity = 51/87 (58.62%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 13  LPIANVERIMKKIIPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHYENRRTLNGDDI 72
           LPIANV RIMKK +P   KISK+AK+T+QEC +EFISF+T EA+ +C  E R+T+NGDD+
Sbjct: 26  LPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDL 85

Query: 73  CWAFASSGLDNYAEVFAKYLLKYREVE 100
            WA  + G ++Y E    YL KYREVE
Sbjct: 86  LWAMTTLGFEDYVEPLKVYLQKYREVE 112

The following BLAST results are available for this feature:

BLAST of Pay0020958 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04027	1.2e-28	54.47	Nuclear transcription factor Y subunit B-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
O82248	8.7e-27	60.64	Nuclear transcription factor Y subunit B-5 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9SIT9	1.6e-25	48.41	Nuclear transcription factor Y subunit B-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q60EQ4	4.8e-25	59.77	Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica OX=39...	[more]
P25209	4.8e-25	59.77	Nuclear transcription factor Y subunit B OS=Zea mays OX=4577 GN=NFY2 PE=2 SV=1	[more]

BLAST of Pay0020958 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U6S7	4.4e-74	100.00	Nuclear transcription factor Y subunit B-4 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A5D3CG76	2.9e-73	99.30	Nuclear transcription factor Y subunit B-4 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3BRX1	2.9e-73	99.30	nuclear transcription factor Y subunit B-4 OS=Cucumis melo OX=3656 GN=LOC1034925...	[more]
A0A0A0LW12	5.1e-46	73.94	CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G5695...	[more]
A0A6J1HUN8	7.9e-39	64.79	nuclear transcription factor Y subunit B-4-like OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Pay0020958 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050890.1	9.1e-74	100.00	nuclear transcription factor Y subunit B-4 [Cucumis melo var. makuwa]	[more]
XP_008451142.1	5.9e-73	99.30	PREDICTED: nuclear transcription factor Y subunit B-4 [Cucumis melo] >TYK10242.1...	[more]
XP_004135780.1	1.1e-45	73.94	nuclear transcription factor Y subunit B-4 [Cucumis sativus]	[more]
KAE8653368.1	3.7e-43	87.62	hypothetical protein Csa_006911 [Cucumis sativus]	[more]
XP_023546470.1	1.9e-39	64.96	nuclear transcription factor Y subunit B-4-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Pay0020958 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09030.1	8.6e-30	54.47	nuclear factor Y, subunit B4	[more]
AT2G47810.1	6.2e-28	60.64	nuclear factor Y, subunit B5	[more]
AT2G13570.1	1.2e-26	48.41	nuclear factor Y, subunit B7	[more]
AT3G53340.1	1.7e-25	57.47	nuclear factor Y, subunit B10	[more]
AT4G14540.1	2.9e-25	58.62	nuclear factor Y, subunit B3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00615	CCAATSUBUNTA	coord: 40..58 score: 46.77 coord: 78..96 score: 28.11 coord: 59..77 score: 27.87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..133
None	No IPR available	PANTHER	PTHR11064:SF147	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-4-LIKE	coord: 10..124
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 12..75 e-value: 2.3E-25 score: 88.6
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 1..134 e-value: 5.7E-37 score: 128.6
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 12..134
IPR027113	Transcription factor NFYB/HAP3	PANTHER	PTHR11064	CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED	coord: 10..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0020958.1	Pay0020958.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0048046	apoplast
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0004565	beta-galactosidase activity
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding