Pay0020856 (gene) Melon (Payzawat) v1

Overview


Name	Pay0020856
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	conserved peptide upstream open reading frame 37
Location	chr03: 27554007 .. 27554317 (+)
RNA-Seq Expression	Pay0020856
Synteny	Pay0020856

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTGCCAAGCAGCTACTCAAACAAGATTTAGAACATTGAAACACGAAAATGGGATTGCTGGAAGTGCCACCATAATCGTTAGAGTCATAGCATGCTTTCAACCTCTCCAGGATTGTCAGGTTCGTAATCAATACCTTAATTGATGCCGTCTTTATGATTGATAAGATATTGAATGAATGTTATTTATAATATCTCTCGCCTTCTTTCTTGATGAAAACACATGTCTGTCTGCAAGTGAACTTATCCCCATTTTTGTACTTCTTTCCAGGCTGAGTACTTTCGTCATTTGTTGAAACCAGTCACGTAG

mRNA sequence

ATGGTGTGCCAAGCAGCTACTCAAACAAGATTTAGAACATTGAAACACGAAAATGGGATTGCTGGAAGTGCCACCATAATCGTTAGAGTCATAGCATGCTTTCAACCTCTCCAGGATTGTCAGGCTGAGTACTTTCGTCATTTGTTGAAACCAGTCACGTAG

Coding sequence (CDS)

ATGGTGTGCCAAGCAGCTACTCAAACAAGATTTAGAACATTGAAACACGAAAATGGGATTGCTGGAAGTGCCACCATAATCGTTAGAGTCATAGCATGCTTTCAACCTCTCCAGGATTGTCAGGCTGAGTACTTTCGTCATTTGTTGAAACCAGTCACGTAG

Protein sequence

MVCQAATQTRFRTLKHENGIAGSATIIVRVIACFQPLQDCQAEYFRHLLKPVT

Homology

[Close]

BLAST of Pay0020856 vs. ExPASy TrEMBL
Match: A0A1S4DVM6 (uncharacterized protein LOC103488104 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488104 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.3e-22
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MVCQAATQTRFRTLKHENGIAGSATIIVRVIACFQPLQDCQAEYFRHLLKPVT 54
          MVCQAATQTRFRTLKHENGIAGSATIIVRVIACFQPLQDCQAEYFRHLLKPVT
Sbjct: 1  MVCQAATQTRFRTLKHENGIAGSATIIVRVIACFQPLQDCQAEYFRHLLKPVT 53

[Close]

BLAST of Pay0020856 vs. ExPASy TrEMBL
Match: A0A199UQL5 (Uncharacterized protein OS=Ananas comosus OX=4615 GN=ACMD2_26596 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.6e-21
Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MVCQAATQTRFRTLKHENGIAGSATIIVRVIACFQPLQDCQAEYFRHLLKPVT 54
          MVCQAATQTRFR LKHENGIAGSATIIVR+IACFQPLQDCQAEYFRHLLKPVT
Sbjct: 1  MVCQAATQTRFRALKHENGIAGSATIIVRIIACFQPLQDCQAEYFRHLLKPVT 53

[Close]

BLAST of Pay0020856 vs. ExPASy TrEMBL
Match: F6H111 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g07210 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.6e-21
Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MVCQAATQTRFRTLKHENGIAGSATIIVRVIACFQPLQDCQAEYFRHLLKPVT 54
          MVCQAA+QTRFR LKHENGIAGSATIIVRVIACFQPLQDCQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGSATIIVRVIACFQPLQDCQAEYFRHLLKPVT 53

[Close]

BLAST of Pay0020856 vs. ExPASy TrEMBL
Match: A0A5J5BV48 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_020902 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.7e-21
Identity = 51/53 (96.23%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 1  MVCQAATQTRFRTLKHENGIAGSATIIVRVIACFQPLQDCQAEYFRHLLKPVT 54
          MVCQAATQTRFR LKHENGIAG ATIIVRVIACFQPLQDCQAEYFRHLLKPVT
Sbjct: 1  MVCQAATQTRFRALKHENGIAGRATIIVRVIACFQPLQDCQAEYFRHLLKPVT 53

[Close]

BLAST of Pay0020856 vs. ExPASy TrEMBL
Match: A0A2G9FWQ8 (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_16538 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 8.0e-21
Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MVCQAATQTRFRTLKHENGIAGSATIIVRVIACFQPLQDCQAEYFRHLLKPVT 54
          MVCQAA+QTRFR LKHENGIAG+ATIIVRVIACFQPLQDCQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGTATIIVRVIACFQPLQDCQAEYFRHLLKPVT 53

[Close]

BLAST of Pay0020856 vs. NCBI nr
Match: XP_016900036.1 (PREDICTED: uncharacterized protein LOC103488104 isoform X2 [Cucumis melo] >XP_016900037.1 PREDICTED: uncharacterized protein LOC103488104 isoform X2 [Cucumis melo])

HSP 1 Score: 113.2 bits (282), Expect = 6.7e-22
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MVCQAATQTRFRTLKHENGIAGSATIIVRVIACFQPLQDCQAEYFRHLLKPVT 54
          MVCQAATQTRFRTLKHENGIAGSATIIVRVIACFQPLQDCQAEYFRHLLKPVT
Sbjct: 1  MVCQAATQTRFRTLKHENGIAGSATIIVRVIACFQPLQDCQAEYFRHLLKPVT 53

[Close]

BLAST of Pay0020856 vs. NCBI nr
Match: OAY67117.1 (hypothetical protein ACMD2_26596 [Ananas comosus])

HSP 1 Score: 110.9 bits (276), Expect = 3.3e-21
Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MVCQAATQTRFRTLKHENGIAGSATIIVRVIACFQPLQDCQAEYFRHLLKPVT 54
          MVCQAATQTRFR LKHENGIAGSATIIVR+IACFQPLQDCQAEYFRHLLKPVT
Sbjct: 1  MVCQAATQTRFRALKHENGIAGSATIIVRIIACFQPLQDCQAEYFRHLLKPVT 53

[Close]

BLAST of Pay0020856 vs. NCBI nr
Match: DAD40989.1 (TPA_asm: hypothetical protein HUJ06_015312 [Nelumbo nucifera])

HSP 1 Score: 109.8 bits (273), Expect = 7.5e-21
Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MVCQAATQTRFRTLKHENGIAGSATIIVRVIACFQPLQDCQAEYFRHLLKPVT 54
          MVCQAA+QTRFR LKHENGIAGSATIIVRVIACFQPLQDCQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRALKHENGIAGSATIIVRVIACFQPLQDCQAEYFRHLLKPVT 53

[Close]

BLAST of Pay0020856 vs. NCBI nr
Match: KAA8545647.1 (hypothetical protein F0562_020902 [Nyssa sinensis])

HSP 1 Score: 109.4 bits (272), Expect = 9.7e-21
Identity = 51/53 (96.23%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 1  MVCQAATQTRFRTLKHENGIAGSATIIVRVIACFQPLQDCQAEYFRHLLKPVT 54
          MVCQAATQTRFR LKHENGIAG ATIIVRVIACFQPLQDCQAEYFRHLLKPVT
Sbjct: 1  MVCQAATQTRFRALKHENGIAGRATIIVRVIACFQPLQDCQAEYFRHLLKPVT 53

[Close]

BLAST of Pay0020856 vs. NCBI nr
Match: KAG2692473.1 (hypothetical protein I3760_08G055400 [Carya illinoinensis] >KAG2698811.1 hypothetical protein I3760_07G165800 [Carya illinoinensis] >KAG6644413.1 hypothetical protein CIPAW_08G054200 [Carya illinoinensis] >KAG6648763.1 hypothetical protein CIPAW_07G168100 [Carya illinoinensis] >KAG6699135.1 hypothetical protein I3842_08G054900 [Carya illinoinensis])

HSP 1 Score: 109.0 bits (271), Expect = 1.3e-20
Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MVCQAATQTRFRTLKHENGIAGSATIIVRVIACFQPLQDCQAEYFRHLLKPVT 54
          MVCQAA+QTRFR +KHENGIAGSATIIVRVIACFQPLQDCQAEYFRHLLKPVT
Sbjct: 1  MVCQAASQTRFRAMKHENGIAGSATIIVRVIACFQPLQDCQAEYFRHLLKPVT 53

[Close]

BLAST of Pay0020856 vs. TAIR 10
Match: AT5G50011.1 (conserved peptide upstream open reading frame 37 )

HSP 1 Score: 92.8 bits (229), Expect = 8.8e-20
Identity = 44/53 (83.02%), Postives = 48/53 (90.57%), Query Frame = 0


Query: 1  MVCQAATQTRFRTLKHENGIAGSATIIVRVIACFQPLQDCQAEYFRHLLKPVT 54
          MVCQ+A QTRFRTLKHE+GI G+  I+VRVIACFQPLQDCQAEYFR LLKPVT
Sbjct: 1  MVCQSAGQTRFRTLKHEHGITGN--IVVRVIACFQPLQDCQAEYFRQLLKPVT 51

[Close]

BLAST of Pay0020856 vs. TAIR 10
Match: AT5G09461.1 (conserved peptide upstream open reading frame 43 )

HSP 1 Score: 81.3 bits (199), Expect = 2.6e-16
Identity = 38/54 (70.37%), Postives = 45/54 (83.33%), Query Frame = 0


Query: 1  MVCQAATQTRFRTLKHE-NGIAGSATIIVRVIACFQPLQDCQAEYFRHLLKPVT 54
          MV Q+A QTRFRT K+E NG +   TI+VRVIACFQP+ +CQAEYFRH+LKPVT
Sbjct: 1  MVSQSAGQTRFRTFKYENNGDSSRPTIVVRVIACFQPMDNCQAEYFRHILKPVT 54

[Close]

BLAST of Pay0020856 vs. TAIR 10
Match: AT5G64341.1 (conserved peptide upstream open reading frame 40 )

HSP 1 Score: 78.6 bits (192), Expect = 1.7e-15
Identity = 35/53 (66.04%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 1  MVCQAATQTRFRTLKHENGIAGSATIIVRVIACFQPLQDCQAEYFRHLLKPVT 54
          MVCQ+  +TRFR LK+E G A  +TI+VRVI C+QP+ +CQAEYFR LLKPVT
Sbjct: 1  MVCQSPGKTRFRGLKYETGNANESTIVVRVIECYQPMDNCQAEYFRLLLKPVT 53

The following BLAST results are available for this feature:

BLAST of Pay0020856 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0020856 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DVM6	3.3e-22	100.00	uncharacterized protein LOC103488104 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A199UQL5	1.6e-21	96.23	Uncharacterized protein OS=Ananas comosus OX=4615 GN=ACMD2_26596 PE=4 SV=1	[more]
F6H111	3.6e-21	96.23	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g07210 PE=4 SV=...	[more]
A0A5J5BV48	4.7e-21	96.23	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_020902 PE=4 SV=1	[more]
A0A2G9FWQ8	8.0e-21	94.34	Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_16538 P...	[more]

BLAST of Pay0020856 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016900036.1	6.7e-22	100.00	PREDICTED: uncharacterized protein LOC103488104 isoform X2 [Cucumis melo] >XP_01...	[more]
OAY67117.1	3.3e-21	96.23	hypothetical protein ACMD2_26596 [Ananas comosus]	[more]
DAD40989.1	7.5e-21	96.23	TPA_asm: hypothetical protein HUJ06_015312 [Nelumbo nucifera]	[more]
KAA8545647.1	9.7e-21	96.23	hypothetical protein F0562_020902 [Nyssa sinensis]	[more]
KAG2692473.1	1.3e-20	94.34	hypothetical protein I3760_08G055400 [Carya illinoinensis] >KAG2698811.1 hypothe...	[more]

BLAST of Pay0020856 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50011.1	8.8e-20	83.02	conserved peptide upstream open reading frame 37	[more]
AT5G09461.1	2.6e-16	70.37	conserved peptide upstream open reading frame 43	[more]
AT5G64341.1	1.7e-15	66.04	conserved peptide upstream open reading frame 40	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35281	BNAA02G34170D PROTEIN	coord: 1..53
None	No IPR available	PANTHER	PTHR35281:SF4	SUBFAMILY NOT NAMED	coord: 1..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0020856.1	Pay0020856.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity