Pay0020830 (gene) Melon (Payzawat) v1

Overview


Name	Pay0020830
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Retrotransposon protein
Location	chr07: 24687320 .. 24688710 (-)
RNA-Seq Expression	Pay0020830
Synteny	Pay0020830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACATATTGCGACGACGTTGAGGACGAGGACGAGGGGGACTCCACGTACGCAACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACAACCTAGCCGCATCGATGTTCACCGATTGGCAGTTCCGTAACGCTTAGCTAAGACATATTTAGATAACAAGTTTTTTATGACTTCGTCGCAATTCTATCGTCTCTAACATGTACTGTAAAAACTAATATGGGCTGTTGCATATGTATTGTACGCGTGCCATAATTTGTATCATGCCTATTTTACTTTGGAGTTTAATGGTGAAATTACTTATGTACTGCATGTATTTTTTCTAATTTCTGATTCTCAGTATGTCAACCTCAAATCGTGCACCGAGACATGTTTGGACGAGGGAGGAGGAGGGGACTCTTGTCGAATGTTTAATGGAGCTAGTGTCAATGGGGGGCTGGAAATCAGATAATGGTACATTTCGCCCAGGATACCTTGCGCAGTTGGTACGCATGATGGCAGAGAAACTACCTGGATGTCAGGTACGAGCAACAACTGTAATTGATTGTAGGATCAAGACACTTAAGCGAACGTTCCAGGCCATTGCCGAAATGCGGGGCCCAGCGTGCAGTGGCTTTGGGTGGAACGATGAAGAGAAATGCATCGTTGCGGAGAAGGAATTATTCGATAATTGGGTTAGGGTATGGAATATAATTTAAACGTCACACAACGTTAACAATTTACATTTAGTAAACAATTTTTTAATTAGTACTCATACGTCATATTTTTTTTCTGCCCGCAGTCGCATCCTGCAGCGAAAGGACTCCTGAACAAACCATTCCCGTATTACGACGAGCTTACATATGTATTTGGTCGGGATAGGGCGACCGGTCGGTTCGCTGAGACATTCGCGGACGTGGGGTCTAACGAGCCAGGTGGCGGATATGACAGATTTGATATGGGGGATGGAAACGAGGACTTCCCGCCCGTGTACAGCCAGGGAGTTGACATCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGCGCTTCAGATGGTAGGACCGGATCAAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCGAGACTTCGAGCTTGAAGCGATACATGTGGCGCTCGACCAAACAAACGAGCAACTCAGGGAGATTGCGCAGTGGCCAGCACGCAACCTTGCAAATGACAACCACGTGCGCACGGAATTTTTCCGCATATTGCGTGAGATGCCAGAACTTACGAGTTTGGATAGGGCGTTATTGCAAAGGCATCTTTTGTCTCGTATGGACGACCTCCGGGGTTTCGTACTCATGCCTGAGGATGAAAGGGAGGGCTTCTGTAGAGTCCTCCTACGAGACATAGAGAGATAG

mRNA sequence

ATGACATATTGCGACGACGTTGAGGACGAGGACGAGGGGGACTCCACGTACGCAACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACAACCTAGCCGCATCGATGTTCACCGATTGGCATATGTCAACCTCAAATCGTGCACCGAGACATGTTTGGACGAGGGAGGAGGAGGGGACTCTTGTCGAATGTTTAATGGAGCTAGTGTCAATGGGGGGCTGGAAATCAGATAATGGTACATTTCGCCCAGGATACCTTGCGCAGTTGGTACGCATGATGGCAGAGAAACTACCTGGATGTCAGGTACGAGCAACAACTGTAATTGATTGTAGGATCAAGACACTTAAGCGAACGTTCCAGGCCATTGCCGAAATGCGGGGCCCAGCGTGCAGTGGCTTTGGGTGGAACGATGAAGAGAAATGCATCGTTGCGGAGAAGGAATTATTCGATAATTGGGTTAGGTCGCATCCTGCAGCGAAAGGACTCCTGAACAAACCATTCCCGTATTACGACGAGCTTACATATGTATTTGGTCGGGATAGGGCGACCGGTCGGTTCGCTGAGACATTCGCGGACGTGGGGTCTAACGAGCCAGGTGGCGGATATGACAGATTTGATATGGGGGATGGAAACGAGGACTTCCCGCCCGTGTACAGCCAGGGAGTTGACATCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGCGCTTCAGATGGTAGGACCGGATCAAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCGAGACTTCGAGCTTGAAGCGATACATGTGGCGCTCGACCAAACAAACGAGCAACTCAGGGAGATTGCGCAGTGGCCAGCACGCAACCTTGCAAATGACAACCACGTGCGCACGGAATTTTTCCGCATATTGCGTGAGATGCCAGAACTTACGAGTTTGGATAGGGCGTTATTGCAAAGGCATCTTTTGTCTCGTATGGACGACCTCCGGGGTTTCGTACTCATGCCTGAGGATGAAAGGGAGGGCTTCTGTAGAGTCCTCCTACGAGACATAGAGAGATAG

Coding sequence (CDS)

ATGACATATTGCGACGACGTTGAGGACGAGGACGAGGGGGACTCCACGTACGCAACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACAACCTAGCCGCATCGATGTTCACCGATTGGCATATGTCAACCTCAAATCGTGCACCGAGACATGTTTGGACGAGGGAGGAGGAGGGGACTCTTGTCGAATGTTTAATGGAGCTAGTGTCAATGGGGGGCTGGAAATCAGATAATGGTACATTTCGCCCAGGATACCTTGCGCAGTTGGTACGCATGATGGCAGAGAAACTACCTGGATGTCAGGTACGAGCAACAACTGTAATTGATTGTAGGATCAAGACACTTAAGCGAACGTTCCAGGCCATTGCCGAAATGCGGGGCCCAGCGTGCAGTGGCTTTGGGTGGAACGATGAAGAGAAATGCATCGTTGCGGAGAAGGAATTATTCGATAATTGGGTTAGGTCGCATCCTGCAGCGAAAGGACTCCTGAACAAACCATTCCCGTATTACGACGAGCTTACATATGTATTTGGTCGGGATAGGGCGACCGGTCGGTTCGCTGAGACATTCGCGGACGTGGGGTCTAACGAGCCAGGTGGCGGATATGACAGATTTGATATGGGGGATGGAAACGAGGACTTCCCGCCCGTGTACAGCCAGGGAGTTGACATCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGCGCTTCAGATGGTAGGACCGGATCAAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCGAGACTTCGAGCTTGAAGCGATACATGTGGCGCTCGACCAAACAAACGAGCAACTCAGGGAGATTGCGCAGTGGCCAGCACGCAACCTTGCAAATGACAACCACGTGCGCACGGAATTTTTCCGCATATTGCGTGAGATGCCAGAACTTACGAGTTTGGATAGGGCGTTATTGCAAAGGCATCTTTTGTCTCGTATGGACGACCTCCGGGGTTTCGTACTCATGCCTGAGGATGAAAGGGAGGGCTTCTGTAGAGTCCTCCTACGAGACATAGAGAGATAG

Protein sequence

MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWHMSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER

Homology

[Close]

BLAST of Pay0020830 vs. ExPASy TrEMBL
Match: A0A5A7T091 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold9475G00160 PE=4 SV=1)

HSP 1 Score: 719.9 bits (1857), Expect = 5.1e-204
Identity = 350/357 (98.04%), Postives = 355/357 (99.44%), Query Frame = 0


Query: 1   MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWHMSTSNRAPR 60
           MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWHMSTSNRAPR
Sbjct: 1   MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWHMSTSNRAPR 60

Query: 61  HVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDC 120
           HVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDC
Sbjct: 61  HVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDC 120

Query: 121 RIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYY 180
           RIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYY
Sbjct: 121 RIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYY 180

Query: 181 DELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVR 240
           DELTYVF RDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDV 
Sbjct: 181 DELTYVFCRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVC 240

Query: 241 ASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPARNLANDNHV 300
           ASRPSRAS+GRTGSSGSKRKRGSQRDFELEAIH+ALDQTNEQLR+IA+WPARNLANDNH+
Sbjct: 241 ASRPSRASEGRTGSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPARNLANDNHM 300

Query: 301 RTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 358
           RTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER
Sbjct: 301 RTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 357

[Close]

BLAST of Pay0020830 vs. ExPASy TrEMBL
Match: E5GBB2 (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 640.6 bits (1651), Expect = 4.0e-180
Identity = 317/357 (88.80%), Postives = 328/357 (91.88%), Query Frame = 0


Query: 1   MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWHMSTSNRAPR 60
           MTYC+DVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRD+LA SMFTDW     +    
Sbjct: 283 MTYCNDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLATSMFTDWQFRGGD---- 342

Query: 61  HVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDC 120
                        C MELVSMGGWKSDNGTFRPGYLAQLVRMMAEKL GCQVRATTVIDC
Sbjct: 343 ------------SCGMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLSGCQVRATTVIDC 402

Query: 121 RIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYY 180
           RIKTLKRTFQAIAEM GPACSGFGWNDEEKCIVAEKELFDNWVRS PAAKGLLN PFPYY
Sbjct: 403 RIKTLKRTFQAIAEMLGPACSGFGWNDEEKCIVAEKELFDNWVRSPPAAKGLLNNPFPYY 462

Query: 181 DELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVR 240
           DELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYS+GVDI QDDVR
Sbjct: 463 DELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSRGVDILQDDVR 522

Query: 241 ASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPARNLANDNHV 300
           ASRPSRAS+G+TGSSGSKRKRGSQRDF++EAIH+ALDQTNEQLR+IA+WPARNLANDNHV
Sbjct: 523 ASRPSRASEGKTGSSGSKRKRGSQRDFDVEAIHLALDQTNEQLRQIAEWPARNLANDNHV 582

Query: 301 RTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 358
           RTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER
Sbjct: 583 RTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 623

[Close]

BLAST of Pay0020830 vs. ExPASy TrEMBL
Match: A0A5D3CWL2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00640 PE=4 SV=1)

HSP 1 Score: 628.2 bits (1619), Expect = 2.0e-176
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 52  MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 111
           MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 112 VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 171
           VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120

Query: 172 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 231
           LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG
Sbjct: 121 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 180

Query: 232 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA 291
           VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA
Sbjct: 181 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA 240

Query: 292 RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVL 351
           RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVL
Sbjct: 241 RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVL 300

Query: 352 LRDIER 358
           LRDIER
Sbjct: 301 LRDIER 306

[Close]

BLAST of Pay0020830 vs. ExPASy TrEMBL
Match: A0A5D3BCN9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001070 PE=4 SV=1)

HSP 1 Score: 627.1 bits (1616), Expect = 4.5e-176
Identity = 305/306 (99.67%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 52  MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 111
           MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 112 VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 171
           VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120

Query: 172 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 231
           LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG
Sbjct: 121 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 180

Query: 232 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA 291
           VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIH+ALDQTNEQLREIAQWPA
Sbjct: 181 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHLALDQTNEQLREIAQWPA 240

Query: 292 RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVL 351
           RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVL
Sbjct: 241 RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVL 300

Query: 352 LRDIER 358
           LRDIER
Sbjct: 301 LRDIER 306

[Close]

BLAST of Pay0020830 vs. ExPASy TrEMBL
Match: A0A5A7T9G6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G002710 PE=4 SV=1)

HSP 1 Score: 626.7 bits (1615), Expect = 5.9e-176
Identity = 305/306 (99.67%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 52  MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 111
           MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 112 VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 171
           VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120

Query: 172 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 231
           LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG
Sbjct: 121 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 180

Query: 232 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA 291
           VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA
Sbjct: 181 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA 240

Query: 292 RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVL 351
           RNLANDNHVRTEFFRILR+MPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVL
Sbjct: 241 RNLANDNHVRTEFFRILRKMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVL 300

Query: 352 LRDIER 358
           LRDIER
Sbjct: 301 LRDIER 306

[Close]

BLAST of Pay0020830 vs. NCBI nr
Match: KAA0036924.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 719.9 bits (1857), Expect = 1.1e-203
Identity = 350/357 (98.04%), Postives = 355/357 (99.44%), Query Frame = 0


Query: 1   MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWHMSTSNRAPR 60
           MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWHMSTSNRAPR
Sbjct: 1   MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWHMSTSNRAPR 60

Query: 61  HVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDC 120
           HVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDC
Sbjct: 61  HVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDC 120

Query: 121 RIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYY 180
           RIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYY
Sbjct: 121 RIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYY 180

Query: 181 DELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVR 240
           DELTYVF RDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDV 
Sbjct: 181 DELTYVFCRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVC 240

Query: 241 ASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPARNLANDNHV 300
           ASRPSRAS+GRTGSSGSKRKRGSQRDFELEAIH+ALDQTNEQLR+IA+WPARNLANDNH+
Sbjct: 241 ASRPSRASEGRTGSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPARNLANDNHM 300

Query: 301 RTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 358
           RTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER
Sbjct: 301 RTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 357

[Close]

BLAST of Pay0020830 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 640.6 bits (1651), Expect = 8.2e-180
Identity = 317/357 (88.80%), Postives = 328/357 (91.88%), Query Frame = 0


Query: 1   MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWHMSTSNRAPR 60
           MTYC+DVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRD+LA SMFTDW     +    
Sbjct: 283 MTYCNDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLATSMFTDWQFRGGD---- 342

Query: 61  HVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDC 120
                        C MELVSMGGWKSDNGTFRPGYLAQLVRMMAEKL GCQVRATTVIDC
Sbjct: 343 ------------SCGMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLSGCQVRATTVIDC 402

Query: 121 RIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYY 180
           RIKTLKRTFQAIAEM GPACSGFGWNDEEKCIVAEKELFDNWVRS PAAKGLLN PFPYY
Sbjct: 403 RIKTLKRTFQAIAEMLGPACSGFGWNDEEKCIVAEKELFDNWVRSPPAAKGLLNNPFPYY 462

Query: 181 DELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVR 240
           DELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYS+GVDI QDDVR
Sbjct: 463 DELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSRGVDILQDDVR 522

Query: 241 ASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPARNLANDNHV 300
           ASRPSRAS+G+TGSSGSKRKRGSQRDF++EAIH+ALDQTNEQLR+IA+WPARNLANDNHV
Sbjct: 523 ASRPSRASEGKTGSSGSKRKRGSQRDFDVEAIHLALDQTNEQLRQIAEWPARNLANDNHV 582

Query: 301 RTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 358
           RTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER
Sbjct: 583 RTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 623

[Close]

BLAST of Pay0020830 vs. NCBI nr
Match: KAA0031555.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0036352.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0043921.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0047622.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0049406.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 628.2 bits (1619), Expect = 4.2e-176
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 52  MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 111
           MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 112 VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 171
           VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120

Query: 172 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 231
           LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG
Sbjct: 121 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 180

Query: 232 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA 291
           VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA
Sbjct: 181 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA 240

Query: 292 RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVL 351
           RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVL
Sbjct: 241 RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVL 300

Query: 352 LRDIER 358
           LRDIER
Sbjct: 301 LRDIER 306

[Close]

BLAST of Pay0020830 vs. NCBI nr
Match: TYJ96194.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYJ96764.1 retrotransposon protein [Cucumis melo var. makuwa] >TYJ97116.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK01046.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK12167.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 627.1 bits (1616), Expect = 9.4e-176
Identity = 305/306 (99.67%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 52  MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 111
           MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 112 VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 171
           VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120

Query: 172 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 231
           LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG
Sbjct: 121 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 180

Query: 232 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA 291
           VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIH+ALDQTNEQLREIAQWPA
Sbjct: 181 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHLALDQTNEQLREIAQWPA 240

Query: 292 RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVL 351
           RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVL
Sbjct: 241 RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVL 300

Query: 352 LRDIER 358
           LRDIER
Sbjct: 301 LRDIER 306

[Close]

BLAST of Pay0020830 vs. NCBI nr
Match: KAA0038065.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 626.7 bits (1615), Expect = 1.2e-175
Identity = 305/306 (99.67%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 52  MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 111
           MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 112 VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 171
           VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120

Query: 172 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 231
           LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG
Sbjct: 121 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQG 180

Query: 232 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA 291
           VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA
Sbjct: 181 VDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPA 240

Query: 292 RNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVL 351
           RNLANDNHVRTEFFRILR+MPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVL
Sbjct: 241 RNLANDNHVRTEFFRILRKMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVL 300

Query: 352 LRDIER 358
           LRDIER
Sbjct: 301 LRDIER 306

[Close]

BLAST of Pay0020830 vs. TAIR 10
Match: AT5G27260.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 63.2 bits (152), Expect = 5.0e-10
Identity = 70/295 (23.73%), Postives = 120/295 (40.68%), Query Frame = 0


Query: 63  WTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAE-KLPGCQVRATTVIDCR 122
           W+ EE   LV+ L+E ++   W+  NGT     L    + M E     C+ +       R
Sbjct: 17  WSPEETKLLVQLLVEGIN-NNWRDSNGTI--SKLTVETKFMPEINKEFCRSKNYNHYLSR 76

Query: 123 IKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYD 182
           +K LK  +Q+  +++    SGFGW+   K   A  E++ +++++HP  K L    F ++D
Sbjct: 77  MKYLKIQYQSCLDLQ-RFSSGFGWDPLTKRFTASDEVWSDYLKAHPNNKQLRYDTFEFFD 136

Query: 183 ELTYVFGRDRATGRFAETFADV--GSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDV 242
           EL  +FG   ATG+ A    D   G     G   R +  D   DF  VY        +  
Sbjct: 137 ELQIIFGEGVATGKNAIGLCDSTDGLTYRAGENPRKEYVD---DFDNVYEYDTTTHHESS 196

Query: 243 RASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHVALDQTNEQLREIAQWPARNLANDNH 302
               P  +           RKR        +     +   + ++ +I Q   R     N 
Sbjct: 197 EHYAPFMSHGTSESPKLPPRKRTRSERSTSQKEESPMMVVSSKILDIIQ--QREERQQNE 256

Query: 303 VRTEFFRILREMPELTSLDRALLQRHL--LSRMDDLRGFVLMPEDEREGFCRVLL 353
           V  +   +   + E++ LD  +  + L  +  +     FV M  +ER G+ + ++
Sbjct: 257 VAQKKNNVWDAIKEISDLDECIRYKALTKIYHLGIQDVFVSMSVEERLGWIQTIM 302

[Close]

BLAST of Pay0020830 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 58.5 bits (140), Expect = 1.2e-08
Identity = 39/160 (24.38%), Postives = 76/160 (47.50%), Query Frame = 0


Query: 39  RDNLAASMFTDWHMSTSNRAPRH--VWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYL 98
           RD+ +A+  ++   S    + R    WT   +  L++ L+E V+ G       TF     
Sbjct: 301 RDDGSAAQTSETKASQEQNSDRTRIFWTPPMDYHLIDLLVEQVNNGNRVGQ--TFITSAW 360

Query: 99  AQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEK 158
            ++V     K  G Q     V+  R K L+R +  I  +     +GF W+     ++A+ 
Sbjct: 361 NEMVTAFNAKF-GSQ-HNKDVLKNRYKHLRRLYNDIKFLLEQ--NGFSWDARRDMVIADD 420

Query: 159 ELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRF 197
           ++++ ++++HP A+    K  P Y  L ++FG++ + GR+
Sbjct: 421 DIWNTYIQAHPEARSYRVKTIPSYPNLCFIFGKETSDGRY 454

[Close]

BLAST of Pay0020830 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 1.0e-07
Identity = 41/169 (24.26%), Postives = 72/169 (42.60%), Query Frame = 0


Query: 56  NRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRA- 115
           N   R VWT E +   +E ++E V  G    D+          L    A K   C   A 
Sbjct: 7   NERLRTVWTPEMDQYFIELMVEQVRKGNRFEDH----------LFSKRAWKFMSCSFTAK 66

Query: 116 ------TTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPA 175
                   V+  R KTL+  F+++  +      GF W+D  + +VA+  ++D +++ HP 
Sbjct: 67  FKFLYGKDVLKNRHKTLRNLFKSVNNLL--IEDGFSWDDTRQMVVADNCVWDEYLKIHPD 126

Query: 176 AKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSN---EPGGGYDR 215
           ++    K  P Y +L  V+    +  +  E+ ++  S    +   GY+R
Sbjct: 127 SRSFRIKSIPCYKDLCLVYSDGMSEHKAEESISEGESKTLIQEDDGYNR 163

[Close]

BLAST of Pay0020830 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 55.5 bits (132), Expect = 1.0e-07
Identity = 41/169 (24.26%), Postives = 72/169 (42.60%), Query Frame = 0


Query: 56  NRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRA- 115
           N   R VWT E +   +E ++E V  G    D+          L    A K   C   A 
Sbjct: 7   NERLRTVWTPEMDQYFIELMVEQVRKGNRFEDH----------LFSKRAWKFMSCSFTAK 66

Query: 116 ------TTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPA 175
                   V+  R KTL+  F+++  +      GF W+D  + +VA+  ++D +++ HP 
Sbjct: 67  FKFLYGKDVLKNRHKTLRNLFKSVNNLL--IEDGFSWDDTRQMVVADNCVWDEYLKIHPD 126

Query: 176 AKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSN---EPGGGYDR 215
           ++    K  P Y +L  V+    +  +  E+ ++  S    +   GY+R
Sbjct: 127 SRSFRIKSIPCYKDLCLVYSDGMSEHKAEESISEGESKTLIQEDDGYNR 163

[Close]

BLAST of Pay0020830 vs. TAIR 10
Match: AT2G24960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 6.4e-05
Identity = 31/153 (20.26%), Postives = 66/153 (43.14%), Query Frame = 0


Query: 51  HMSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGC 110
           + +T N   R  WT   E   ++ ++E +  G       TF      +++ +   K  G 
Sbjct: 3   NQTTCNDRTRTYWTPTMERFFIDLMLEHLHRG--NRTGHTFNKQAWNEMLTVFNSKF-GS 62

Query: 111 QVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAK 170
           Q     V+  R   L + +  +  +      GF W+   + ++ +  L+  ++++HP A+
Sbjct: 63  QY-DKDVLKSRYTNLWKQYNDVKCLLDH--GGFVWDQTHQTVIGDDSLWSLYLKAHPEAR 122

Query: 171 GLLNKPFPYYDELTYVFGRDRATGRFAETFADV 204
               KP   + +L  ++G   A GR++ +  D+
Sbjct: 123 VYKTKPVLNFSDLCLIYGYTVADGRYSMSSHDL 149

The following BLAST results are available for this feature:

BLAST of Pay0020830 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0020830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T091	5.1e-204	98.04	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
E5GBB2	4.0e-180	88.80	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A5D3CWL2	2.0e-176	100.00	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BCN9	4.5e-176	99.67	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7T9G6	5.9e-176	99.67	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Pay0020830 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036924.1	1.1e-203	98.04	retrotransposon protein [Cucumis melo var. makuwa]	[more]
ADN33754.1	8.2e-180	88.80	retrotransposon protein [Cucumis melo subsp. melo]	[more]
KAA0031555.1	4.2e-176	100.00	retrotransposon protein [Cucumis melo var. makuwa] >KAA0036352.1 retrotransposon...	[more]
TYJ96194.1	9.4e-176	99.67	retrotransposon protein [Cucumis melo var. makuwa] >TYJ96764.1 retrotransposon p...	[more]
KAA0038065.1	1.2e-175	99.67	retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Pay0020830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G27260.1	5.0e-10	23.73	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G24960.2	1.2e-08	24.38	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G02210.1	1.0e-07	24.26	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G02210.2	1.0e-07	24.26	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G24960.1	6.4e-05	20.26	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024752	Myb/SANT-like domain	PFAM	PF12776	Myb_DNA-bind_3	coord: 63..161 e-value: 2.9E-7 score: 31.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..265
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 53..349
None	No IPR available	PANTHER	PTHR46250:SF3	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	coord: 53..349

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0020830.1	Pay0020830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding