Pay0020731 (gene) Melon (Payzawat) v1

Overview
NamePay0020731
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionPre-mRNA-splicing factor CWC25-like protein
Locationchr01: 4851020 .. 4858108 (+)
RNA-Seq ExpressionPay0020731
SyntenyPay0020731
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCAAATGACACAGACTCTGCATTTGGCTTCTGCAAGTAACACCAAAACAATGTTGTATCCCAAAAGTTTACCTTAAAACTCCAATTGAATTCCCTTCCAAAGCTAAGATTTATTTTTCCTAAATCATCATCTTTGGATTGACAATGAACAAACAAGTTTTGGTCTTTGCTTAGGCCATTGACAATATGGATGTGCCATCTCTTCAGCCCGAGACCCTCGGTTGGCTTAAGTATAGCCAATGACAACGCTAACAAGAAGCAAAATATCAAAAAGTGCTTTTCCATAGATCTCATAGTCTCCATTTACTTGAGATATTGCACTTAATTTGAAAAGCACTTTGGTTTCGGGTTATAAAAAGGGATGTAAAGTGCAATGGATATATCCAAATTCTTTGAATGATGCGGCGATATAAATGCTGTCCGTTTGAGTAAAATTTTGGTGAGTTATAAATTAATAAGTTACTTAATTAAGGCTCTAATTATTATTTAATTTCTTGTATTTAGTCATGAGTCTTTAGTCTTGAAACGATTGATTTATTACTGCATTTAATTCGGGATGTAACATCACAAAACAAGCTATTTAAAAAGATTGAGACTTATTTTTGGTAATGAAATAATATACGATGAAAACATGGTAAATAATGGTAAGGTATTATAAATAAGTAATATAATAGTATAGATGTCCATGTCATATGTCTTATTATTGTAGACACCTAGGGTACGTTTTGGGAAGGGTTGAGTTAGAGAAGGGTTAATGTTCTGATAAAACTAGTGTAATGATAAATCTAGTTTTATCATAACCCTTGTTTGGGGAAAAGATTTAGAAATATAGTTTTATGTAAGAGGCGTTTGGGGAGAAAGGGTTCACGTGGGAAGGCCGGGATTTATGGGGGGGGGGAATTTTTTTTATGATAAGATGTGTTGGGAGAAGGGTTTAGGTGGGTAGTTTTATGAGAATTTTATAATAAGATGTGTTTTGGAGAATGGTTATGTGGGGTAGGTTTACCTGAAATTAATGATAAAATTTATTTGGGGGAAGTGTTATGTGGGTTGGGTTATGAATAATTTTTTTTATGTGTAATTTTTTTTAAATGACATTGTAAATATAAGTAAGAAATTATTATTACATATTTTTTTACGAAAACGTTGAACCCGTCTTATTGAAAATAATTTTTTCTATGTGTAACGTTATTAAGTAGTAAAGATAGTTGGTCGCATTTGAAAATAATTTTTAACAAAATTTACTAAATTTATTCTAGAGTCAATTTTTTAAAATACAATTATTTATTGCCTATTTGTAATTAGTGATAAATAATTAGCGATAGCGGTAGCGGCGTACATTTGTTTTTAGCATATATAATTATATGGTGTAACGCATGTGTCCATATTTATAATTATTCATTAAATTAGTTATTATGTAGTAGTTGAATGCCATATTGCTCAAATTGTTACTATTTTCGTTAATTTTAAAAAACATTTTCAATAGAATTGAAGGGATGTAGAAGGGAGAAAAAGATAACATATGCATAAGATGTCAAGTACATACGAAAAAAGGTTGTGTACAATATGAAAAAGAAATAACAGTCAATAACATAGTGGAAGTCAAGGAAAAAGAAAAGCTAGCCAACGAAGTACAAACATAAACTATCTGGAGATGTCTCATAGGATGACTCTACAAAAGCCCTCCCTCTCATCCTCAGGCATCGATGAGAAATCCCGCATTTTGTCTATACGAGACAAAAGGTTCCTTGCAATAACGCCCTATCCAAACTTGTTAGTTTCGACATCTCACGCAATATGCGAAAGAATTCCTACCGCACTTGGTTGTCATTGGCAAGGGCGTGTTCAGGCCAATCCGCAATCATCCTAAGTTGGTCAGTTTGTACACTCCAGCGCCATATATATGACTTCAAGCTCTGCCTTTCACTGGCTTCCCCTTTTCCTCTTCGATTCGCTCGATCCCACTCTACCCTCAGACGCACGAGAAGGTCGTGATGTGCGTACATCCTCCTAGGACATGTCAATCCCCTAGCTGTACATTGATGGGAAGTCCTCGTTCACATCAAGCATGTCGAACCTCTCATACGCGACAGGCTCCTTAGACTCCACGTCTACGAACGTCTTTGCGAAGCGACCCGCCGCTCTATCACGGCCGAACGCATATGCAAGTTCGTCGTAATAGATAAATGGTTTGTTAAGGAGTCCATTCACTGGCAAGTAGCAGAACGTTTAATTTATGTTTCTTACCTTAACCCAGTTATTGAAGAGTTCCTTCTCCGTAATTATGCATTTTGCGTCGTCGTTCCAACCGAATCCATTGCAGGTTGGCCCCCGCATTTCTGCGATGGCCTGGAAAATCCACTTCAGTGTCTTTATTCTGTAGTCAGTTACAATGGTTGCACGGACCTGACATCCTGGTAATTTCTCCGACATTATGTGTACCAGTTGTGTCAAGTAACCTGGCCGAAACGTACCATTGTCGGATTTCCATCCCCCCATGGAAACGAAATCCACTAAACACTCTACAAGAGTGTCCTCCTCCTCCTTAATCTATACATGCCTCGGGCACGCAATGAGGTAGCCATTCTGAGAATGAAAAACGATAAATAATTCATGGAAGCCATTAGTAATTTTACATTTCCACATTTACAATACAAACGAAGAGGAAACAATACATGACCTATACTATATGTAACAAATGCACGGTTACATTACATTTAAAATAAGAACAAAGTAACAAAGTAATTTACATTGCCACACAACCGACCCTAATTTTAAAAGCGTTTTAGTTAACATTACGCAACTGCCATTTCTTTGAACGTTGCTTTAGCTAATTCGTCGCACCAATTTGACCACTCGATTGTCGTCTCAATGTACTGAATGTCTTCTGTAGCGGTGGTGGTGGCTTATGTGGAGTCCCCCTCGTCGAGTTCGTCTATGTCGTCGCAATTGATCATTTCTTTGTTTATCAAATTATGGAGCAATTAACATGCTAGGATTGTTCGGCACTGCACTTAGAGCGGATAATAGGACTTCCCACGAAGTATTGCCCAACGATCCTTAAGAACACCGAATGCGCGCTCAATCACATTTATTGCAGATAAGTGCTTCATGTTGAAGTATTCCTTTGTAGTTGTTGGGGCATTTCCATCACCCCACCAATCTTGCAAGTGGTAGCGCTAACCTCTGTATGGAGCGAGGAATCCCTTAGCATTTGGATAACCCACATCACATACGTAATAATATCCTGTACCGAAAACTGATACTCTATTGGCATTCCATTTGTAACTTCCAAAATGGTAATGAAAATTAAAATTGTAGATACCCTTTGGCATTTGCAATCCGTTTTCTCTGCCAAGGGCATCCTAGAGAATTCGTGATTCTACTACATATCCTTCATAACCGGCAAGGACATATACAAAATCCTCTTTCGTGTCGCAGACGTCGAGCACATTTGTCGCAATTTCCCCCTTTCGCGTTCTGAACGAAGGTTGTTTTGCTGCGGGCACGTTCACCTTTATGTACGTCCCATCCAATGCCCCAAAGCAATTTTGCAGGTTCATAGAAAGAGGCTTACATTACCGTGACATTCTGATACTTGACAAACTTACCATATAAATAGTGGCGCACCTCGAAACACTTCTAACGTTGATCAGTGTAGTTGTTTGATACTGACACAGGTTTCTTTATCAACTCGTCGTGGAGTCGCACCATAACCAAAAGGACGAGGTTAAAATGTCGTGAGATTGTCTCGCTTGATTGTACAAATTTCCGTTGAATTACACGGTTCTTAACGTCATGTGCAAGGACGTGCAAGAACATCGCAACCATTTTCTCGACATCAACAATCTCCGTCGATGAAAGACCAGCTACAGTCCTAAGTAAGTGGCATAGAATTGCAAATATGCGCCTATTTATGTAGGTGCTTTCGCGACACACAAGATCAGACTCGTGTATCATCCGAAAGTACGCAAACTGCCTAATTCTATTCCTTGTAGCAAACGGTGTTTGTAGGAGATGCTTATTGACGTTCATTAGTAGCTCCAACGTTAGGAGCATCTGACGTTGGGCAAATGTGAACTCGGTTAGGACTCCAAGAAGTGTTTGTTGATCCATGTCAAATGACCTTAACTGCATTACAAAATATGTGCCTAAGTATGTTATTAGAATGGTCATTTACAATCACTAGAAGAAATCCAACTTTTAATGTCGGGTGGAAAAAATAAAAACGGAGCTTTAATGTCGGTTTTCAAAAGATGGATGTTTAATGTCGGTTTTAAGTCGACATTAAAGAGGGAGCTTTATGTCGGTTTAAAATTCGACCTTAAAAAACAAAAATTCTTTCCCCTTTTTTTTTTTTTGAAAAGCGACATTAAAGCTTATTTCAATTTTTAAATTTTTAAAAATTTTTTAATTTCGAAAAAAGTTAATGGTTTCTCTCTTAATTTACTCTTTACTCTCCGAGCCACACGATTTTACAATCCCTCACTTTCTGAATTTCTTTTATTCTCTTCTCAATCTCATCTCACTTTAATCCCTCTCTTCTCTGAACGGCAAGCGCCGCCACCATCTTTAGAAGAAATCTCTCGTGCCCGGTCGTTATCGAACCCACCATCGTCGTCCCTCGTGTCCTGCCCGTACCTTGTCATTGTCGAACAGTCCTTCTTCGACTGTCGTTGTGCTCGCCACCACCGTCGATTCAAACATCTCTACATTTCTATTTAAGGTAGTTTTACTATCATATAGAAAAAATGAATGATATAACATCTCTTGCATTTCTCAAAACCCACGATTTCACCTATTGCCTCAAATTTCCACAGCCCACAATTTCATCTCAAACTCAAATTTCCTTATTTTCTCTATGTTTCGTTAGAAGTACAAAAGAAAAGAAGAAGTCGAAGGGATAAAATTTTGTCGTTGCCGCAAAAATTTTCGAGGCAATGTTCTAACGTAAATCCCAATTCTCCCTCAAATTTCTTGATTTCTTATTCTCCATCTTCTTCTTTCTTTTGTTATCCGTGTTTCAATTTTTTAGGTTTCAGGAGAAGATATGGGAGAACCCATTTGCATGACTTTGGTCGTTGCCGCCGGTAACAAAATACTTCAGAAGAAGGGAACCGTCATTTTCTTTTTCACATTTTTTAGGTCATTTAATTTCATCCGATTCGTTTTTTTATTCTTCCTTGAGTTGTTTGATCGCTAGTAGTATAGTGTTTCTTTAATTCTCAATTTTTTGGATTTCATTAAGGAAGCATGAGAGATTGAATTTTCTTTATGAATTGGGTTTGAAAGTTGGGAAAGCTAGCAATTTCGATGGATTTAAAAGCCTTGAAACCCTACTTAGTTCAACTATTGCCGCGACTGCCACTGAACCATCTAGTTCCAAGGTATTATTGCGTTTTTTCGCTAATTTGTGTGCTTTGGTTATCTCTCTTTGTATTGTTCAATTATGATGTTTGTTGGATATTAGAGCTCTGTTTGAGGATGAGCCTCACTCTGCCAATGATGCATGGAGGAAACTCCATTCTGATCCTTTGCTCATCATTTAACAGCGTGAGAATAAACTCTTGCTCGCGTAAAAAACAATCCTATGGCTATGATTTGCAAAACCGTTACTAGTTTTTAATCTCCTTTTATGGCTTTAACACCACTAAACCTTAAAATTTAAATTCTTATAACACGGGCTGATGAAATTCGTTTTATGTGGAACTCTTTCCTTCCTTTCATTATTTGTCAGAAGAGGATTTTTGAACTTTTTCTTAGTTGTCATGGACACTGTTACTTGGGTGGCCTCTAATTACTTAATTATTCTTTTGAGCTGATGTGATGAATTTCTCTGCATTTCTCTTACTCTTTTGATAGAAGCTAAAGATGAATCTTTGATCAGAAAGTTTTTTCTATATTATTGCTGAGACAATCTTGGCATAGAGTAAATGCTTATCAGCATTATTTAATCTGTCATTGATTTTTGTTGTAGAGATTAAAGTTATCCCTATCCAAAGTAGATTAGAAGACAAGAAAGTAATGGTCATTTAGTAAATATTTTAGTCTGAAGTGGACAAGCTAAAGTAGAGAATACAGTTATATTGAAGGAAGGTAGAGTTCAATAATGTATTGAACAAAAACTGAGAAATGATAGATTTCTAGGATTTCTCAAGTTCATAATGGATTTCTAGGATTTTCTCCAACAATTTTCAATAAATAAACAATCAAATCTTCGAAAATTTTCAATAAATAAACATTTTCTAACACTAACTTTACTGAAAACAAGGAGCCTGACCAATCCCTTTACATTTTTTCTATTACCATTTCTTCTCAATTTAAGCATTATAAAACGCATTCTAGGTGTTTGGTTAAACGTTGCAAGCACTGGTGGAGTTTTTTAGGTTTTGGTTTTGTTTCTTATGTGCTTATTGGTTGAGACTTTTTGTGTTTTGGTTTGATTTTGATCTTTTATTCATATGGTAATAATGATTCTTATAGTATGAAAAAGATTTGGGGTATTTTGATCTTTAATAGTGTTGAATATAAGTTGTGTTTATTGATAGTGAAATTATATGTAGGTGTTTGGATGATGTTATATTTGTTGTAGTTCATATGGAAGTGTTGAAAATTGTATGCTGGTATTTTAAGTGTTGATCTTGTGTGCATTGCAGGTGAAATAGAAATATAAGGTTTGCCACGGAGTGTAACATTTACGAAATTGTGCTTTCTTTGGTTTTTGCTTCGTCTTTGTGCAATCTACTTGGCAGCTTGAAAGGTGGAAATGACCATATAGATAGATGGTCAGACGATCGTTGAAGGTTGAAGACTGAAAAGACGTTTGGTCGTGGGTATCTTGCATTTTTCGTGCTTGATCTCTGTATATCATATACTATGATCACAAATACTCTGTACCATGTTAACTTGTTTAAAGTTGGTTGTAATAGTCACATTGTATGCGTGGTCAAAGTCCCTATCAATTGTCATTTCCTAGCTTACTAGTTTATCCGTTTCAGATTGTTAATAGAATCAAGAAGTTAAGGAAGAAAGCTGCCCTTGAACCTACAGATACAGTAGAAGTGTATTTTCGATCACAAGATTAG

mRNA sequence

ATGCCTCAAATGACACAGACTCTGCATTTGGCTTCTGCAAAAGTACAAAAGAAAAGAAGAAGTCGAAGGGATAAAATTTTGTCGTTGCCGCAAAAATTTTCGAGGCAATGTTCTAACGTTTCAGGAGAAGATATGGGAGAACCCATTTGCATGACTTTGGTCGTTGCCGCCGGTAACAAAATACTTCAGAAGAAGGGAACCGTCATTTTCTTTTTCACATTTTTTAGGAAGCATGAGAGATTGAATTTTCTTTATGAATTGGGTTTGAAAGTTGGGAAAGCTAGCAATTTCGATGGATTTAAAAGCCTTGAAACCCTACTTAGTTCAACTATTGCCGCGACTGCCACTGAACCATCTAGTTCCAAGATTGTTAATAGAATCAAGAAGTTAAGGAAGAAAGCTGCCCTTGAACCTACAGATACAGTAGAAGTGTATTTTCGATCACAAGATTAG

Coding sequence (CDS)

ATGCCTCAAATGACACAGACTCTGCATTTGGCTTCTGCAAAAGTACAAAAGAAAAGAAGAAGTCGAAGGGATAAAATTTTGTCGTTGCCGCAAAAATTTTCGAGGCAATGTTCTAACGTTTCAGGAGAAGATATGGGAGAACCCATTTGCATGACTTTGGTCGTTGCCGCCGGTAACAAAATACTTCAGAAGAAGGGAACCGTCATTTTCTTTTTCACATTTTTTAGGAAGCATGAGAGATTGAATTTTCTTTATGAATTGGGTTTGAAAGTTGGGAAAGCTAGCAATTTCGATGGATTTAAAAGCCTTGAAACCCTACTTAGTTCAACTATTGCCGCGACTGCCACTGAACCATCTAGTTCCAAGATTGTTAATAGAATCAAGAAGTTAAGGAAGAAAGCTGCCCTTGAACCTACAGATACAGTAGAAGTGTATTTTCGATCACAAGATTAG

Protein sequence

MPQMTQTLHLASAKVQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTIAATATEPSSSKIVNRIKKLRKKAALEPTDTVEVYFRSQD
Homology
[Close]
BLAST of Pay0020731 vs. ExPASy Swiss-Prot
Match: F4JLM5 (Isoleucine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana OX=3702 GN=At4g10320 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.8e-04
Identity = 22/29 (75.86%), Postives = 26/29 (89.66%), Query Frame = 0 

Query: 122  KIVNRIKKLRKKAALEPTDTVEVYFRSQD 151
            +IVNRI+KLRKK+ LEPTD VEVYF+S D
Sbjct: 1015 EIVNRIQKLRKKSGLEPTDFVEVYFQSLD 1043

[Close]
BLAST of Pay0020731 vs. ExPASy TrEMBL
Match: A0A1S4E3L4 (uncharacterized protein LOC103500480 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500480 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 3.3e-51
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 12  SAKVQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICMTLVVAAGNKILQKKGTVIFF 71
           S +VQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICMTLVVAAGNKILQKKGTVIFF
Sbjct: 39  SLEVQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICMTLVVAAGNKILQKKGTVIFF 98

Query: 72  FTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTIAATATEPSSSKI 124
           FTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTIAATATEPSSSK+
Sbjct: 99  FTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTIAATATEPSSSKV 150

[Close]
BLAST of Pay0020731 vs. ExPASy TrEMBL
Match: A0A1S3CFU5 (uncharacterized protein LOC103500480 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500480 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 3.3e-51
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 12  SAKVQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICMTLVVAAGNKILQKKGTVIFF 71
           S +VQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICMTLVVAAGNKILQKKGTVIFF
Sbjct: 39  SLEVQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICMTLVVAAGNKILQKKGTVIFF 98

Query: 72  FTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTIAATATEPSSSKI 124
           FTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTIAATATEPSSSK+
Sbjct: 99  FTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTIAATATEPSSSKV 150

[Close]
BLAST of Pay0020731 vs. ExPASy TrEMBL
Match: A0A5A7T0H4 (Pre-mRNA-splicing factor CWC25-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1199G00290 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.4e-30
Identity = 73/78 (93.59%), Postives = 74/78 (94.87%), Query Frame = 0 

Query: 45  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLE 104
           MGEPICMTLVVA GNKILQKKGTVIFFFTFFRKHERLN LYELGL+VGKASN DGFKSLE
Sbjct: 1   MGEPICMTLVVATGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLE 60

Query: 105 TLLSSTIAATATEPSSSK 123
           TL SSTIAATATEPSSSK
Sbjct: 61  TLPSSTIAATATEPSSSK 78

[Close]
BLAST of Pay0020731 vs. ExPASy TrEMBL
Match: A0A5D3DE30 (Pre-mRNA-splicing factor CWC25-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1073G00040 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.4e-30
Identity = 73/78 (93.59%), Postives = 74/78 (94.87%), Query Frame = 0 

Query: 45  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLE 104
           MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLN LYELGL+VGKASN DGFKSLE
Sbjct: 1   MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLE 60

Query: 105 TLLSSTIAATATEPSSSK 123
           TL SSTIA TATEPSSSK
Sbjct: 61  TLPSSTIATTATEPSSSK 78

[Close]
BLAST of Pay0020731 vs. ExPASy TrEMBL
Match: A0A5D3CF18 (Pre-mRNA-splicing factor CWC25-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G001190 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 4.1e-30
Identity = 73/78 (93.59%), Postives = 74/78 (94.87%), Query Frame = 0 

Query: 45  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLE 104
           MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHE LN LYELGL+VGKASN DGFKSLE
Sbjct: 1   MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHETLNLLYELGLEVGKASNSDGFKSLE 60

Query: 105 TLLSSTIAATATEPSSSK 123
           TL SSTIAATATEPSSSK
Sbjct: 61  TLPSSTIAATATEPSSSK 78

[Close]
BLAST of Pay0020731 vs. NCBI nr
Match: XP_016902821.1 (PREDICTED: uncharacterized protein LOC103500480 isoform X2 [Cucumis melo])

HSP 1 Score: 211.1 bits (536), Expect = 6.7e-51
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 12  SAKVQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICMTLVVAAGNKILQKKGTVIFF 71
           S +VQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICMTLVVAAGNKILQKKGTVIFF
Sbjct: 39  SLEVQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICMTLVVAAGNKILQKKGTVIFF 98

Query: 72  FTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTIAATATEPSSSKI 124
           FTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTIAATATEPSSSK+
Sbjct: 99  FTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTIAATATEPSSSKV 150

[Close]
BLAST of Pay0020731 vs. NCBI nr
Match: XP_008462005.1 (PREDICTED: uncharacterized protein LOC103500480 isoform X1 [Cucumis melo])

HSP 1 Score: 211.1 bits (536), Expect = 6.7e-51
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 12  SAKVQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICMTLVVAAGNKILQKKGTVIFF 71
           S +VQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICMTLVVAAGNKILQKKGTVIFF
Sbjct: 39  SLEVQKKRRSRRDKILSLPQKFSRQCSNVSGEDMGEPICMTLVVAAGNKILQKKGTVIFF 98

Query: 72  FTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTIAATATEPSSSKI 124
           FTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTIAATATEPSSSK+
Sbjct: 99  FTFFRKHERLNFLYELGLKVGKASNFDGFKSLETLLSSTIAATATEPSSSKV 150

[Close]
BLAST of Pay0020731 vs. NCBI nr
Match: KAA0034965.1 (pre-mRNA-splicing factor CWC25-like protein [Cucumis melo var. makuwa] >TYK21320.1 pre-mRNA-splicing factor CWC25-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 141.7 bits (356), Expect = 5.0e-30
Identity = 73/78 (93.59%), Postives = 74/78 (94.87%), Query Frame = 0 

Query: 45  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLE 104
           MGEPICMTLVVA GNKILQKKGTVIFFFTFFRKHERLN LYELGL+VGKASN DGFKSLE
Sbjct: 1   MGEPICMTLVVATGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLE 60

Query: 105 TLLSSTIAATATEPSSSK 123
           TL SSTIAATATEPSSSK
Sbjct: 61  TLPSSTIAATATEPSSSK 78

[Close]
BLAST of Pay0020731 vs. NCBI nr
Match: TYK21842.1 (pre-mRNA-splicing factor CWC25-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 141.7 bits (356), Expect = 5.0e-30
Identity = 73/78 (93.59%), Postives = 74/78 (94.87%), Query Frame = 0 

Query: 45  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLE 104
           MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLN LYELGL+VGKASN DGFKSLE
Sbjct: 1   MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNLLYELGLEVGKASNSDGFKSLE 60

Query: 105 TLLSSTIAATATEPSSSK 123
           TL SSTIA TATEPSSSK
Sbjct: 61  TLPSSTIATTATEPSSSK 78

[Close]
BLAST of Pay0020731 vs. NCBI nr
Match: KAA0037864.1 (pre-mRNA-splicing factor CWC25-like protein [Cucumis melo var. makuwa] >TYK09818.1 pre-mRNA-splicing factor CWC25-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 141.0 bits (354), Expect = 8.5e-30
Identity = 73/78 (93.59%), Postives = 74/78 (94.87%), Query Frame = 0 

Query: 45  MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHERLNFLYELGLKVGKASNFDGFKSLE 104
           MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHE LN LYELGL+VGKASN DGFKSLE
Sbjct: 1   MGEPICMTLVVAAGNKILQKKGTVIFFFTFFRKHETLNLLYELGLEVGKASNSDGFKSLE 60

Query: 105 TLLSSTIAATATEPSSSK 123
           TL SSTIAATATEPSSSK
Sbjct: 61  TLPSSTIAATATEPSSSK 78

[Close]
BLAST of Pay0020731 vs. TAIR 10
Match: AT4G10320.1 (tRNA synthetase class I (I, L, M and V) family protein )

HSP 1 Score: 46.2 bits (108), Expect = 2.7e-05
Identity = 22/29 (75.86%), Postives = 26/29 (89.66%), Query Frame = 0 

Query: 122  KIVNRIKKLRKKAALEPTDTVEVYFRSQD 151
            +IVNRI+KLRKK+ LEPTD VEVYF+S D
Sbjct: 1015 EIVNRIQKLRKKSGLEPTDFVEVYFQSLD 1043

The following BLAST results are available for this feature:
BLAST of Pay0020731 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
F4JLM53.8e-0475.86Isoleucine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana OX=3702 GN=At4g1032... [more]
BLAST of Pay0020731 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4E3L43.3e-5197.32uncharacterized protein LOC103500480 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3CFU53.3e-5197.32uncharacterized protein LOC103500480 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5A7T0H42.4e-3093.59Pre-mRNA-splicing factor CWC25-like protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A5D3DE302.4e-3093.59Pre-mRNA-splicing factor CWC25-like protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A5D3CF184.1e-3093.59Pre-mRNA-splicing factor CWC25-like protein OS=Cucumis melo var. makuwa OX=11946... [more]
BLAST of Pay0020731 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016902821.16.7e-5197.32PREDICTED: uncharacterized protein LOC103500480 isoform X2 [Cucumis melo][more]
XP_008462005.16.7e-5197.32PREDICTED: uncharacterized protein LOC103500480 isoform X1 [Cucumis melo][more]
KAA0034965.15.0e-3093.59pre-mRNA-splicing factor CWC25-like protein [Cucumis melo var. makuwa] >TYK21320... [more]
TYK21842.15.0e-3093.59pre-mRNA-splicing factor CWC25-like protein [Cucumis melo var. makuwa][more]
KAA0037864.18.5e-3093.59pre-mRNA-splicing factor CWC25-like protein [Cucumis melo var. makuwa] >TYK09818... [more]
BLAST of Pay0020731 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G10320.12.7e-0575.86tRNA synthetase class I (I, L, M and V) family protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0020731.1Pay0020731.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000398 mRNA splicing, via spliceosome
cellular_component GO:0005684 U2-type spliceosomal complex