Pay0020650 (gene) Melon (Payzawat) v1

Overview


Name	Pay0020650
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Reverse transcriptase
Location	chr08: 14915021 .. 14916100 (-)
RNA-Seq Expression	Pay0020650
Synteny	Pay0020650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCACCACGTACTGGTAGACGACGCCGGCAGAATCAGGACGGGATGCAAGGTCCTACCCAAGGTCCATCTGTAGGGGAATCTAGTACCCTAGGAGTTCGAGGTGGTGCAGGAAACGAGCAGTTTGCGAGAACAACACAGGAAATAGGAAGGACAGATAGAGCAGAGCCTAGTGATCCAGAAAAGGCATACGGAATTGAACGGCTGAAGAAGTTAGGGGCTACAGTGTTTGAAGGTTCCACAGATCCAGCTGATGCAGAGAACTGGTTGAATATGCTTGAAAAGTGTTTTGATGTGATGAATTGTCCTGAGGAGCGAAAGGTTAGATTGGCCACATTTTTGTTGCAAAAAGAGGCTGAAGGATGGTGGAAATCTATATTAGCAAGACGCAGTGATGCACGTGCTTTAGACTGGCAGACTTTTAGAGGCATATTCGAAGATAAGTATTATCCCAGCACATACTGCGAAGCCAAGAGGGATGAATTTCTGGGGTTGAAACAAGGATCACTTTCAGTGGCTGAGTATGAGAGGAAGTATACCGAGCTTTCACGGTATGCTGACGTTATTATAGCTTCTGAGAGTGACAGGTGCCGAAGGTTTGAAAGAGGGTTGCGTTTTGAAATACGTACCCCAGTTACAGCCATTGCTAAGTGGACGAATTTCTCTCAGTTAGTGGAGACTGCCCTTCGTGTGGAGCAGAGTATAACAGAAGAGAAATCGGCAGTGGAGCTTAGTCGTGGGACTTCAACAGCTAGTGGATTTAGAGGCCGTGAGCAGCGGAGGTTCACGCCTGGGATAAATATTTCAAGCCGTCAAGATTTTAAGAATCGCTCTGGAGGCCAAGCATCGAGGAACGTGAGTTATGGTAGTGTTTTTCAGAGACAGAGCCAGAGAATACCTAGTCAACCCATTAGATCAACAGTAAGATCGCAACCAGGTCAGGAGTCCATTGCTAGTACCGTCAGGCGAATACCATGCACGAGTTGTGGCAGGAACCATCGGGGTCAGTGTTTGGTAGGTGCCGTGTATGTTACCAGTGCGGACAGCCAGGACATTTCAAGAAAGATTGTCCGCAGTTGA

mRNA sequence

ATGCCACCACGTACTGGTAGACGACGCCGGCAGAATCAGGACGGGATGCAAGGTCCTACCCAAGGTCCATCTGTAGGGGAATCTAGTACCCTAGGAGTTCGAGGTGGTGCAGGAAACGAGCAGTTTGCGAGAACAACACAGGAAATAGGAAGGACAGATAGAGCAGAGCCTAGTGATCCAGAAAAGGCATACGGAATTGAACGGCTGAAGAAGTTAGGGGCTACAGTGTTTGAAGGTTCCACAGATCCAGCTGATGCAGAGAACTGGTTGAATATGCTTGAAAAGTGTTTTGATGTGATGAATTGTCCTGAGGAGCGAAAGGTTAGATTGGCCACATTTTTGTTGCAAAAAGAGGCTGAAGGATGGTGGAAATCTATATTAGCAAGACGCAGTGATGCACGTGCTTTAGACTGGCAGACTTTTAGAGGCATATTCGAAGATAAGTATTATCCCAGCACATACTGCGAAGCCAAGAGGGATGAATTTCTGGGGTTGAAACAAGGATCACTTTCAGTGGCTGAGTATGAGAGGAAGTATACCGAGCTTTCACGGTATGCTGACGTTATTATAGCTTCTGAGAGTGACAGGTGCCGAAGGTTTGAAAGAGGGTTGCGTTTTGAAATACGTACCCCAGTTACAGCCATTGCTAAGTGGACGAATTTCTCTCAGTTAGTGGAGACTGCCCTTCGTGTGGAGCAGAGTATAACAGAAGAGAAATCGGCAGTGGAGCTTAGTCGTGGGACTTCAACAGCTAGTGGATTTAGAGGCCGTGAGCAGCGGAGGTTCACGCCTGGGATAAATATTTCAAGCCGTCAAGATTTTAAGAATCGCTCTGGAGGCCAAGCATCGAGGAACGTGAGTTATGGTAGTGTTTTTCAGAGACAGAGCCAGAGAATACCTAGTCAACCCATTAGATCAACAGTAAGATCGCAACCAGGTCAGGAGTCCATTGCTAGTACCGTCAGGCGAATACCATGCACGAGTTGTGGCAGGAACCATCGGGGTCAGTGTTTGGTAGGTGCCGTGTATGTTACCAGTGCGGACAGCCAGGACATTTCAAGAAAGATTGTCCGCAGTTGA

Coding sequence (CDS)

ATGCCACCACGTACTGGTAGACGACGCCGGCAGAATCAGGACGGGATGCAAGGTCCTACCCAAGGTCCATCTGTAGGGGAATCTAGTACCCTAGGAGTTCGAGGTGGTGCAGGAAACGAGCAGTTTGCGAGAACAACACAGGAAATAGGAAGGACAGATAGAGCAGAGCCTAGTGATCCAGAAAAGGCATACGGAATTGAACGGCTGAAGAAGTTAGGGGCTACAGTGTTTGAAGGTTCCACAGATCCAGCTGATGCAGAGAACTGGTTGAATATGCTTGAAAAGTGTTTTGATGTGATGAATTGTCCTGAGGAGCGAAAGGTTAGATTGGCCACATTTTTGTTGCAAAAAGAGGCTGAAGGATGGTGGAAATCTATATTAGCAAGACGCAGTGATGCACGTGCTTTAGACTGGCAGACTTTTAGAGGCATATTCGAAGATAAGTATTATCCCAGCACATACTGCGAAGCCAAGAGGGATGAATTTCTGGGGTTGAAACAAGGATCACTTTCAGTGGCTGAGTATGAGAGGAAGTATACCGAGCTTTCACGGTATGCTGACGTTATTATAGCTTCTGAGAGTGACAGGTGCCGAAGGTTTGAAAGAGGGTTGCGTTTTGAAATACGTACCCCAGTTACAGCCATTGCTAAGTGGACGAATTTCTCTCAGTTAGTGGAGACTGCCCTTCGTGTGGAGCAGAGTATAACAGAAGAGAAATCGGCAGTGGAGCTTAGTCGTGGGACTTCAACAGCTAGTGGATTTAGAGGCCGTGAGCAGCGGAGGTTCACGCCTGGGATAAATATTTCAAGCCGTCAAGATTTTAAGAATCGCTCTGGAGGCCAAGCATCGAGGAACGTGAGTTATGGTAGTGTTTTTCAGAGACAGAGCCAGAGAATACCTAGTCAACCCATTAGATCAACAGTAAGATCGCAACCAGGTCAGGAGTCCATTGCTAGTACCGTCAGGCGAATACCATGCACGAGTTGTGGCAGGAACCATCGGGGTCAGTGTTTGGTAGGTGCCGTGTATGTTACCAGTGCGGACAGCCAGGACATTTCAAGAAAGATTGTCCGCAGTTGA

Protein sequence

MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAVYVTSADSQDISRKIVRS

Homology

[Close]

BLAST of Pay0020650 vs. ExPASy TrEMBL
Match: A0A5A7U2V7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00630 PE=4 SV=1)

HSP 1 Score: 674.9 bits (1740), Expect = 1.9e-190
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 60
           MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP
Sbjct: 1   MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 60

Query: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120

Query: 121 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 121 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180

Query: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240
           ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS
Sbjct: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Sbjct: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300

Query: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA 342
           SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA
Sbjct: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA 341

[Close]

BLAST of Pay0020650 vs. ExPASy TrEMBL
Match: A0A5D3BS67 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold509G00050 PE=4 SV=1)

HSP 1 Score: 674.9 bits (1740), Expect = 1.9e-190
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 60
           MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP
Sbjct: 39  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 98

Query: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 99  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 158

Query: 121 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 159 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 218

Query: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240
           ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS
Sbjct: 219 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 278

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Sbjct: 279 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 338

Query: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA 342
           SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA
Sbjct: 339 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA 379

[Close]

BLAST of Pay0020650 vs. ExPASy TrEMBL
Match: A0A5D3BHI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold115G00450 PE=4 SV=1)

HSP 1 Score: 674.9 bits (1740), Expect = 1.9e-190
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 60
           MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP
Sbjct: 39  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 98

Query: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 99  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 158

Query: 121 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 159 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 218

Query: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240
           ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS
Sbjct: 219 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 278

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Sbjct: 279 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 338

Query: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA 342
           SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA
Sbjct: 339 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA 379

[Close]

BLAST of Pay0020650 vs. ExPASy TrEMBL
Match: A0A5A7T1Y5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00980 PE=4 SV=1)

HSP 1 Score: 674.9 bits (1740), Expect = 1.9e-190
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 60
           MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP
Sbjct: 39  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 98

Query: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 99  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 158

Query: 121 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 159 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 218

Query: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240
           ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS
Sbjct: 219 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 278

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Sbjct: 279 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 338

Query: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA 342
           SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA
Sbjct: 339 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA 379

[Close]

BLAST of Pay0020650 vs. ExPASy TrEMBL
Match: A0A5D3BZJ4 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00240 PE=4 SV=1)

HSP 1 Score: 674.9 bits (1740), Expect = 1.9e-190
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 60
           MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP
Sbjct: 1   MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 60

Query: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120

Query: 121 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 121 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180

Query: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240
           ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS
Sbjct: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Sbjct: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300

Query: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA 342
           SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA
Sbjct: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA 341

[Close]

BLAST of Pay0020650 vs. NCBI nr
Match: KAA0066849.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 674.9 bits (1740), Expect = 3.9e-190
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 60
           MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP
Sbjct: 39  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 98

Query: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 99  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 158

Query: 121 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 159 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 218

Query: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240
           ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS
Sbjct: 219 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 278

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Sbjct: 279 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 338

Query: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA 342
           SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA
Sbjct: 339 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA 379

[Close]

BLAST of Pay0020650 vs. NCBI nr
Match: KAA0035455.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK01987.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK03719.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK25877.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 674.9 bits (1740), Expect = 3.9e-190
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 60
           MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP
Sbjct: 39  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 98

Query: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 99  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 158

Query: 121 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 159 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 218

Query: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240
           ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS
Sbjct: 219 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 278

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Sbjct: 279 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 338

Query: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA 342
           SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA
Sbjct: 339 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA 379

[Close]

BLAST of Pay0020650 vs. NCBI nr
Match: TYK06334.1 (putative polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 674.9 bits (1740), Expect = 3.9e-190
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 60
           MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP
Sbjct: 1   MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 60

Query: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120

Query: 121 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 121 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180

Query: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240
           ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS
Sbjct: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Sbjct: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300

Query: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA 342
           SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA
Sbjct: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA 341

[Close]

BLAST of Pay0020650 vs. NCBI nr
Match: TYK27507.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 674.9 bits (1740), Expect = 3.9e-190
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 60
           MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP
Sbjct: 1   MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 60

Query: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120

Query: 121 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 121 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180

Query: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240
           ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS
Sbjct: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Sbjct: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300

Query: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA 342
           SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA
Sbjct: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA 341

[Close]

BLAST of Pay0020650 vs. NCBI nr
Match: KAA0056684.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 674.9 bits (1740), Expect = 3.9e-190
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 60
           MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP
Sbjct: 250 MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 309

Query: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 310 EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 369

Query: 121 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 370 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 429

Query: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240
           ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS
Sbjct: 430 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 489

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Sbjct: 490 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 549

Query: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA 342
           SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA
Sbjct: 550 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGA 590

The following BLAST results are available for this feature:

BLAST of Pay0020650 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0020650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U2V7	1.9e-190	100.00	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5D3BS67	1.9e-190	100.00	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold50...	[more]
A0A5D3BHI1	1.9e-190	100.00	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7T1Y5	1.9e-190	100.00	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold43...	[more]
A0A5D3BZJ4	1.9e-190	100.00	CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of Pay0020650 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0066849.1	3.9e-190	100.00	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0035455.1	3.9e-190	100.00	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1...	[more]
TYK06334.1	3.9e-190	100.00	putative polyprotein [Cucumis melo var. makuwa]	[more]
TYK27507.1	3.9e-190	100.00	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0056684.1	3.9e-190	100.00	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]

BLAST of Pay0020650 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 110..205 e-value: 3.4E-14 score: 52.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 263..316
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 246..316
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..63
None	No IPR available	PANTHER	PTHR34482:SF4	POLYMERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 78..334
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 78..334

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0020650.1	Pay0020650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding