Pay0020532 (gene) Melon (Payzawat) v1

Overview


Name	Pay0020532
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	transcription initiation factor TFIID subunit 7
Location	chr09: 4751203 .. 4753479 (+)
RNA-Seq Expression	Pay0020532
Synteny	Pay0020532

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAGCAGTTTGTATTGAGGGTTCCACCGTCTGTTGCTGAACGAATTGAACGTCTACTAAATGAAAATGCTTCTTCATCTGAAGATGCTTCATTGGATTTGTCTTTCTCTGGTAGTAGAACTTATACAGTCATCTTTTGATTCATTCTGTACCTTCCGTGTTGTTTCCGTCACATTTGCGATGAACGGATAGATTTTCCGGATAGATTAGCTTTGTAGCCTCTTAAAAAGAAAAAGTAACTTCTGATACAAAGCTTTTTCTCTCTGTTCTTTTTTACCTTGAATGTTTCCTTTTATCGATGATTGCCAACGTGTGCTTCTTAGGCCAAGTTTTGCACGTAGTTGATCTCACTTTTGCCATGTGCTTGTCTGGCTAAGTTTAGTTATTGTGTACGGATTTCTATCCCAAACTTAAATTGGCCAAATATTTGTTTGCTATTGTAATTAATGGAAAAGTAATTTGGCAGTAATATCAGGAGATAGAGAGAGACTTGGAAATAGATCTAATTGTGCAGTATGGTTTTGTTATAATTTGAGGCTTGGTTTAATTGCCTATAATATGGCCTCTTACATTGCATCCAGAGGACGGGAGAAGTGGAACTTTTGCCATTGGTGATGATCATTTTCCAGCATCTCTTCTGGATCTCCCTTGTGTAGTGGAATCCTACAAAACATACGATGATACTGTGCTAATCAAAGCTGCAGACATTGGTCAGGTAAAATGATATTAGAATCATTCGCACATGGATTTCAAAAAACACGACCACTCCATTTCTTACGTTTTATGAGTTGACGTTTTTTCAATAGATGATTATGGTTAGAGAACCGGGTGATCCTGCTCCAGATTCTACTGAGTATAGGCATGGTCTGACCCCTCCTATGAGGGATGCTCGAAAGCGTAGGTTTCGAAGAGAGCCAGATTTAAATGTATGGTGTTCTATTTCCTCTTACTATTAGTTTCACGTAGAATTTTCTTATGAGTAAGTAAATTGCTGTATCGCATCATAATAAATTGAGATTTCTACTAATATAGTGAGCAGGTAGTCCGGGATAAATTATTGAATGATGCAAGTACAATGTAGTTACATAGTTTGTGCTTTACATGTTTGTCTCATATATAAACATTTGATCAACATTGATCTTTTAACTTTTTGGGTCAATAGTGACATGTTAAGCTCCCTTTTCTTTTCCCCATCTTTTCAATCATAGTCGGTCTATATTTGCATTTGTTCTTCATATCAAACTTTGTTGCATCTAGAAGGGTGTCATTTGATTCTAGCATACTGATTCTCAAGGTTGTTAAATCGTGAAATGGAATATGCATCAAAATGGAGTTTATTGTGTATTGAAATATAAATATAAATTACAAAGCCTAAGGCCTCATTGAGTAACCATTTCAATTTTTTGTTTTAAAATCTTTGTTTAATAAAAACAAAAACCATGTGTTTAGTAATTGAATTTGTGTTCTGTTTTTGAAAAACAAAATGTTTCATTTTGAAAGCTTTTTTTTTTCATTTTTAATTTTCCTTCGTAATTATAAAAACAAGTTTCTTGTGTAAAAAAGCCAAAAAGAGAATTAGTTACCAAACACACTTGTTTTTTAAAAATTAATTTGAAAAACAAAAGTCAGAAAACAAATGGATTACTAAACAGGCCCTAAAGATTCTGTTTTCTTTCTTTTTTGGCAGCCTGAGCTTGTACGACGTGTGGAGAAAGATTTATTAAATATCATGGCAGGAGGAACTACTGAAAATGCAGATATCCTTCATACGTTATGGTTATGCTTTTCAGTTTCATTTGTGTTTTAAACTCATTAGCATATTAGTTGATGAAACAAACGTGTCCATCTCCACCTCAAGCCGCATCGTTAAGATTGTTTAAAGCCTAATAAATATAATGGATTGAGAATTATTTTAATTGGCCCTCGCATGAAATTCTTTGATTGAAAAATTCAAGAAACGTACGGGGAACAGGAAATGACAATTATTTTGTTGAGGGCGATTGTTTTCTAACACAAAAGGCCTTTTTGCTTGTCATGTTCTGACGTAAGTTGTATGTTTTTATGCTGCAACTTAACATTAGAAGTTCCTTGACTGAGCATTCTCACATGTTGGAGTGGCTGAGCAACAGGATGATAGAGATGAGAATCCTCATCATACAAATGCAAAGCCTGCTTCCGCACCTGCACCCAAGCCTGATGTAATGGAAACTGAAACAAATGTTGGTGAGCCTGAAAGGAGCGATTCTGATGACTCTGATCACTCAATTGATTAA

mRNA sequence

ATGGAGGAGCAGTTTGTATTGAGGGTTCCACCGTCTGTTGCTGAACGAATTGAACGTCTACTAAATGAAAATGCTTCTTCATCTGAAGATGCTTCATTGGATTTGTCTTTCTCTGAGGACGGGAGAAGTGGAACTTTTGCCATTGGTGATGATCATTTTCCAGCATCTCTTCTGGATCTCCCTTGTGTAGTGGAATCCTACAAAACATACGATGATACTGTGCTAATCAAAGCTGCAGACATTGGTCAGATGATTATGGTTAGAGAACCGGGTGATCCTGCTCCAGATTCTACTGAGTATAGGCATGGTCTGACCCCTCCTATGAGGGATGCTCGAAAGCGTAGGTTTCGAAGAGAGCCAGATTTAAATCCTGAGCTTGTACGACGTGTGGAGAAAGATTTATTAAATATCATGGCAGGAGGAACTACTGAAAATGCAGATATCCTTCATACGTTATGGTTATGCTTTTCACAACAGGATGATAGAGATGAGAATCCTCATCATACAAATGCAAAGCCTGCTTCCGCACCTGCACCCAAGCCTGATGTAATGGAAACTGAAACAAATGTTGGTGAGCCTGAAAGGAGCGATTCTGATGACTCTGATCACTCAATTGATTAA

Coding sequence (CDS)

ATGGAGGAGCAGTTTGTATTGAGGGTTCCACCGTCTGTTGCTGAACGAATTGAACGTCTACTAAATGAAAATGCTTCTTCATCTGAAGATGCTTCATTGGATTTGTCTTTCTCTGAGGACGGGAGAAGTGGAACTTTTGCCATTGGTGATGATCATTTTCCAGCATCTCTTCTGGATCTCCCTTGTGTAGTGGAATCCTACAAAACATACGATGATACTGTGCTAATCAAAGCTGCAGACATTGGTCAGATGATTATGGTTAGAGAACCGGGTGATCCTGCTCCAGATTCTACTGAGTATAGGCATGGTCTGACCCCTCCTATGAGGGATGCTCGAAAGCGTAGGTTTCGAAGAGAGCCAGATTTAAATCCTGAGCTTGTACGACGTGTGGAGAAAGATTTATTAAATATCATGGCAGGAGGAACTACTGAAAATGCAGATATCCTTCATACGTTATGGTTATGCTTTTCACAACAGGATGATAGAGATGAGAATCCTCATCATACAAATGCAAAGCCTGCTTCCGCACCTGCACCCAAGCCTGATGTAATGGAAACTGAAACAAATGTTGGTGAGCCTGAAAGGAGCGATTCTGATGACTCTGATCACTCAATTGATTAA

Protein sequence

MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREPDLNPELVRRVEKDLLNIMAGGTTENADILHTLWLCFSQQDDRDENPHHTNAKPASAPAPKPDVMETETNVGEPERSDSDDSDHSID

Homology

[Close]

BLAST of Pay0020532 vs. ExPASy Swiss-Prot
Match: B9DG24 (Transcription initiation factor TFIID subunit 7 OS=Arabidopsis thaliana OX=3702 GN=TAF7 PE=1 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 3.2e-62
Identity = 115/145 (79.31%), Postives = 134/145 (92.41%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQF+LRVPPSV+ERI+RLL+E+AS+S++  LDL FSEDGR+GTF IG+D FPASLLDL
Sbjct: 1   MEEQFILRVPPSVSERIDRLLSEDASTSDEIPLDLFFSEDGRNGTFMIGNDEFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           P VVES+KTYDD  L+K ADIGQMIMVREPGDPAP++ EYRHGLTPPM+DARKRRFRREP
Sbjct: 61  PAVVESFKTYDDCALVKTADIGQMIMVREPGDPAPNTVEYRHGLTPPMKDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTEN 146
           DLNPELV+RVE+DLLNI++GGT EN
Sbjct: 121 DLNPELVQRVERDLLNILSGGTVEN 145

[Close]

BLAST of Pay0020532 vs. ExPASy Swiss-Prot
Match: Q9D3R9 (Transcription initiation factor TFIID subunit 7-like OS=Mus musculus OX=10090 GN=Taf7l PE=1 SV=2)

HSP 1 Score: 82.0 bits (201), Expect = 8.5e-15
Identity = 47/155 (30.32%), Postives = 81/155 (52.26%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           +EEQF+LR+PP  A  + ++++   ++ +D  L + FS DG      + +   PA L++L
Sbjct: 106 VEEQFILRLPPEQAYAVRKIIHSRNAAWKD-KLKIDFSPDGHHAVVQVDNVSLPAKLVNL 165

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTE--------------------- 120
           PCV+ S KT D     K AD+ QM++    G+P     E                     
Sbjct: 166 PCVIGSLKTIDRKTFYKTADVSQMLVCSPEGEPHSPPEEPVVSTGPTVIGISEGKAERKK 225

Query: 121 --YRHGLTPPMRDARKRRFRREPDLNPELVRRVEK 133
             ++HG+TPP+++ RK+RFR+     P+ V++V++
Sbjct: 226 YNWKHGITPPLKNVRKKRFRKTTKKLPD-VKQVDE 258

[Close]

BLAST of Pay0020532 vs. ExPASy Swiss-Prot
Match: Q9R1C0 (Transcription initiation factor TFIID subunit 7 OS=Mus musculus OX=10090 GN=Taf7 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 7.2e-14
Identity = 53/185 (28.65%), Postives = 84/185 (45.41%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           +E QF+LR+PP  A  + R +     + +D  L +    DGR G   +      A L+DL
Sbjct: 12  LESQFILRLPPEYAATVRRAVQSGHVNLKD-KLSIELHPDGRHGIVRVDRVPLAAKLVDL 71

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTE--------------------- 120
           PCV ES KT D     K ADI QM++    GD  P   E                     
Sbjct: 72  PCVTESLKTIDKKTFYKTADISQMLVATVDGDLYPPVEEAAATADPKANKKKDKDKEKKF 131

Query: 121 -YRHGLTPPMRDARKRRFRREPDLNPELVRRVEKDLLNIMAGGTTENADILHTLWLCFSQ 164
            + HG+T P+++ RKRRFR+           VEK++  ++    + +A+ + T W   ++
Sbjct: 132 VWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLL----STDAEAVSTRWEIIAE 191

[Close]

BLAST of Pay0020532 vs. ExPASy Swiss-Prot
Match: Q6R1L1 (Transcription initiation factor TFIID subunit 7 OS=Cricetulus griseus OX=10029 GN=TAF7 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.7e-13
Identity = 55/185 (29.73%), Postives = 90/185 (48.65%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           +E QF+LR+PP  A  + R +     + +D  L +    DGR G   +      A L+DL
Sbjct: 12  LESQFILRLPPEYASTVRRAVQSGHVNLKD-RLTIELHPDGRHGIVRVDRVPLAAKLVDL 71

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIM----------VREPGDPA-PDSTE---------- 120
           PCV+ES KT D     K ADI QM++          V EP  PA P +++          
Sbjct: 72  PCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPVEEPVAPADPKASKKKDKDKEKKF 131

Query: 121 -YRHGLTPPMRDARKRRFRREPDLNPELVRRVEKDLLNIMAGGTTENADILHTLWLCFSQ 164
            + HG+T P+++ RKRRFR+           VEK++  ++    + +A+ + T W   ++
Sbjct: 132 VWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLL----STDAEAVSTRWEIIAE 191

[Close]

BLAST of Pay0020532 vs. ExPASy Swiss-Prot
Match: Q15545 (Transcription initiation factor TFIID subunit 7 OS=Homo sapiens OX=9606 GN=TAF7 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.1e-13
Identity = 52/185 (28.11%), Postives = 85/185 (45.95%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           +E QF+LR+PP  A  + R +     + +D  L +    DGR G   +      + L+DL
Sbjct: 12  LESQFILRLPPEYASTVRRAVQSGHVNLKD-RLTIELHPDGRHGIVRVDRVPLASKLVDL 71

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTE--------------------- 120
           PCV+ES KT D     K ADI QM++    GD  P   E                     
Sbjct: 72  PCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPVEEPVASTDPKASKKKDKDKEKKF 131

Query: 121 -YRHGLTPPMRDARKRRFRREPDLNPELVRRVEKDLLNIMAGGTTENADILHTLWLCFSQ 164
            + HG+T P+++ RKRRFR+           VEK++  ++    + +A+ + T W   ++
Sbjct: 132 IWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLL----STDAEAVSTRWEIIAE 191

[Close]

BLAST of Pay0020532 vs. ExPASy TrEMBL
Match: A0A1S3C8V9 (transcription initiation factor TFIID subunit 7 OS=Cucumis melo OX=3656 GN=LOC103498146 PE=3 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 9.5e-102
Identity = 196/206 (95.15%), Postives = 197/206 (95.63%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADILHTLWLCFSQQDDRDENPHHTNAKPASAPAPK 180
           DLNPELVRRVEKDLLNIMAGGTTENAD+         QQDDRDENPHHTNAKPASAPAPK
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADV-----GVAEQQDDRDENPHHTNAKPASAPAPK 180

Query: 181 PDVMETETNVGEPERSDSDDSDHSID 207
           PDVMETETNVGEPERSDSDDSDHSID
Sbjct: 181 PDVMETETNVGEPERSDSDDSDHSID 201

[Close]

BLAST of Pay0020532 vs. ExPASy TrEMBL
Match: A0A0A0KSB3 (TAFII55_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517200 PE=3 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.2e-98
Identity = 191/206 (92.72%), Postives = 194/206 (94.17%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSS+DASLDLSFS+DGRSGTFAIGDDHFPASLLDL
Sbjct: 96  MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDL 155

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADIGQMIMVREP DPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 156 PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 215

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADILHTLWLCFSQQDDRDENPHHTNAKPASAPAPK 180
           DLNPELVRRVEKDLLNIMAGGTTENAD+         QQDDRDENP HTNAKPASAPAPK
Sbjct: 216 DLNPELVRRVEKDLLNIMAGGTTENADV-----GVAEQQDDRDENPDHTNAKPASAPAPK 275

Query: 181 PDVMETETNVGEPERSDSDDSDHSID 207
           PDVMETETNVGEPERSDSDDSD SID
Sbjct: 276 PDVMETETNVGEPERSDSDDSDRSID 296

[Close]

BLAST of Pay0020532 vs. ExPASy TrEMBL
Match: A0A6J1JR83 (transcription initiation factor TFIID subunit 7 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111487113 PE=3 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.5e-94
Identity = 185/206 (89.81%), Postives = 188/206 (91.26%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSSED SLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADI QMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIAQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADILHTLWLCFSQQDDRDENPHHTNAKPASAPAPK 180
           DLNPELVRRVEKDLLNIMAGGTTENAD+          QDD+ EN HH +AKPAS PA K
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADV-----GVAEHQDDKHENSHHASAKPASTPAAK 180

Query: 181 PDVMETETNVGEPERSDSDDSDHSID 207
           PDVMETET VGEPERSDSDDSDHSID
Sbjct: 181 PDVMETETTVGEPERSDSDDSDHSID 201

[Close]

BLAST of Pay0020532 vs. ExPASy TrEMBL
Match: A0A6J1H9I8 (transcription initiation factor TFIID subunit 7 OS=Cucurbita moschata OX=3662 GN=LOC111461346 PE=3 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.5e-94
Identity = 185/206 (89.81%), Postives = 188/206 (91.26%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSSED SLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADI QMIMVR+PGDPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIAQMIMVRDPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADILHTLWLCFSQQDDRDENPHHTNAKPASAPAPK 180
           DLNPELVRRVEKDLLNIMAGGTTENAD+          QDDR EN HH +AKPAS PA K
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADV-----GVAEHQDDRHENSHHASAKPASTPAAK 180

Query: 181 PDVMETETNVGEPERSDSDDSDHSID 207
           PDVMETET VGEPERSDSDDSDHSID
Sbjct: 181 PDVMETETTVGEPERSDSDDSDHSID 201

[Close]

BLAST of Pay0020532 vs. ExPASy TrEMBL
Match: A0A6J1JHS5 (transcription initiation factor TFIID subunit 7 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487113 PE=3 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.5e-94
Identity = 185/206 (89.81%), Postives = 188/206 (91.26%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSSED SLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 85  MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 144

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADI QMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 145 PCVVESYKTYDDTVLIKAADIAQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 204

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADILHTLWLCFSQQDDRDENPHHTNAKPASAPAPK 180
           DLNPELVRRVEKDLLNIMAGGTTENAD+          QDD+ EN HH +AKPAS PA K
Sbjct: 205 DLNPELVRRVEKDLLNIMAGGTTENADV-----GVAEHQDDKHENSHHASAKPASTPAAK 264

Query: 181 PDVMETETNVGEPERSDSDDSDHSID 207
           PDVMETET VGEPERSDSDDSDHSID
Sbjct: 265 PDVMETETTVGEPERSDSDDSDHSID 285

[Close]

BLAST of Pay0020532 vs. NCBI nr
Match: XP_008458871.1 (PREDICTED: transcription initiation factor TFIID subunit 7 [Cucumis melo] >XP_008458872.1 PREDICTED: transcription initiation factor TFIID subunit 7 [Cucumis melo])

HSP 1 Score: 379.4 bits (973), Expect = 2.0e-101
Identity = 196/206 (95.15%), Postives = 197/206 (95.63%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADILHTLWLCFSQQDDRDENPHHTNAKPASAPAPK 180
           DLNPELVRRVEKDLLNIMAGGTTENAD+         QQDDRDENPHHTNAKPASAPAPK
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADV-----GVAEQQDDRDENPHHTNAKPASAPAPK 180

Query: 181 PDVMETETNVGEPERSDSDDSDHSID 207
           PDVMETETNVGEPERSDSDDSDHSID
Sbjct: 181 PDVMETETNVGEPERSDSDDSDHSID 201

[Close]

BLAST of Pay0020532 vs. NCBI nr
Match: XP_004142764.1 (transcription initiation factor TFIID subunit 7 [Cucumis sativus] >XP_011655371.1 transcription initiation factor TFIID subunit 7 [Cucumis sativus] >XP_011655372.1 transcription initiation factor TFIID subunit 7 [Cucumis sativus] >XP_011655373.1 transcription initiation factor TFIID subunit 7 [Cucumis sativus] >KAE8648545.1 hypothetical protein Csa_008553 [Cucumis sativus])

HSP 1 Score: 368.2 bits (944), Expect = 4.5e-98
Identity = 191/206 (92.72%), Postives = 194/206 (94.17%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSS+DASLDLSFS+DGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADIGQMIMVREP DPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADILHTLWLCFSQQDDRDENPHHTNAKPASAPAPK 180
           DLNPELVRRVEKDLLNIMAGGTTENAD+         QQDDRDENP HTNAKPASAPAPK
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADV-----GVAEQQDDRDENPDHTNAKPASAPAPK 180

Query: 181 PDVMETETNVGEPERSDSDDSDHSID 207
           PDVMETETNVGEPERSDSDDSD SID
Sbjct: 181 PDVMETETNVGEPERSDSDDSDRSID 201

[Close]

BLAST of Pay0020532 vs. NCBI nr
Match: XP_038891097.1 (transcription initiation factor TFIID subunit 7 [Benincasa hispida] >XP_038891098.1 transcription initiation factor TFIID subunit 7 [Benincasa hispida])

HSP 1 Score: 364.0 bits (933), Expect = 8.5e-97
Identity = 188/206 (91.26%), Postives = 192/206 (93.20%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNE+ASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNESASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIK ADIGQMIMVREPGD APDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKTADIGQMIMVREPGDAAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADILHTLWLCFSQQDDRDENPHHTNAKPASAPAPK 180
           DLNPELVRRVEKDLLNIMAGGTTENAD+         QQDDRDENPHH +AKPAS PA K
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADV-----GVAEQQDDRDENPHHASAKPASVPAAK 180

Query: 181 PDVMETETNVGEPERSDSDDSDHSID 207
           PDVMETETNVGEPERSDSDDSDHS+D
Sbjct: 181 PDVMETETNVGEPERSDSDDSDHSVD 201

[Close]

BLAST of Pay0020532 vs. NCBI nr
Match: XP_023516679.1 (transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo] >XP_023516685.1 transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo] >XP_023516692.1 transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo] >XP_023516700.1 transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 356.7 bits (914), Expect = 1.4e-94
Identity = 186/206 (90.29%), Postives = 188/206 (91.26%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSSED SLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADI QMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIAQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADILHTLWLCFSQQDDRDENPHHTNAKPASAPAPK 180
           DLNPELVRRVEKDLLNIMAGGTTENAD+          QDDR EN HH +AKPAS PA K
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADV-----GVAEHQDDRHENSHHASAKPASTPAAK 180

Query: 181 PDVMETETNVGEPERSDSDDSDHSID 207
           PDVMETET VGEPERSDSDDSDHSID
Sbjct: 181 PDVMETETTVGEPERSDSDDSDHSID 201

[Close]

BLAST of Pay0020532 vs. NCBI nr
Match: XP_022990129.1 (transcription initiation factor TFIID subunit 7 isoform X3 [Cucurbita maxima] >XP_022990130.1 transcription initiation factor TFIID subunit 7 isoform X3 [Cucurbita maxima])

HSP 1 Score: 355.5 bits (911), Expect = 3.0e-94
Identity = 185/206 (89.81%), Postives = 188/206 (91.26%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQFVLRVPPSVAERIERLLNENASSSED SLDLSFSEDGRSGTFAIGDDHFPASLLDL
Sbjct: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDPSLDLSFSEDGRSGTFAIGDDHFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           PCVVESYKTYDDTVLIKAADI QMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP
Sbjct: 61  PCVVESYKTYDDTVLIKAADIAQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADILHTLWLCFSQQDDRDENPHHTNAKPASAPAPK 180
           DLNPELVRRVEKDLLNIMAGGTTENAD+          QDD+ EN HH +AKPAS PA K
Sbjct: 121 DLNPELVRRVEKDLLNIMAGGTTENADV-----GVAEHQDDKHENSHHASAKPASTPAAK 180

Query: 181 PDVMETETNVGEPERSDSDDSDHSID 207
           PDVMETET VGEPERSDSDDSDHSID
Sbjct: 181 PDVMETETTVGEPERSDSDDSDHSID 201

[Close]

BLAST of Pay0020532 vs. TAIR 10
Match: AT1G55300.1 (TBP-associated factor 7 )

HSP 1 Score: 252.3 bits (643), Expect = 3.4e-67
Identity = 138/213 (64.79%), Postives = 169/213 (79.34%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQF+LRVPPSV+ERI+RLL+E+AS+S++  LDL FSEDGR+GTF IG+D FPASLLDL
Sbjct: 1   MEEQFILRVPPSVSERIDRLLSEDASTSDEIPLDLFFSEDGRNGTFMIGNDEFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           P VVES+KTYDD  L+K ADIGQMIMVREPGDPAP++ EYRHGLTPPM+DARKRRFRREP
Sbjct: 61  PAVVESFKTYDDCALVKTADIGQMIMVREPGDPAPNTVEYRHGLTPPMKDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTENADILHTLWLCFSQQDDRDENPHHTNAK---PASAP 180
           DLNPELV+RVE+DLLNI++GGT EN            +Q++   N + +NA     +S+P
Sbjct: 121 DLNPELVQRVERDLLNILSGGTVENV----------HEQEEPATNENASNASKKVSSSSP 180

Query: 181 AP--KPDVMETETN--VG-EPERSDSDDSDHSI 206
            P  KP+  ET T+   G EPERS+S+DSD S+
Sbjct: 181 TPVEKPEAPETGTSNPTGVEPERSESEDSDDSM 203

[Close]

BLAST of Pay0020532 vs. TAIR 10
Match: AT1G55300.2 (TBP-associated factor 7 )

HSP 1 Score: 239.6 bits (610), Expect = 2.3e-63
Identity = 115/145 (79.31%), Postives = 134/145 (92.41%), Query Frame = 0


Query: 1   MEEQFVLRVPPSVAERIERLLNENASSSEDASLDLSFSEDGRSGTFAIGDDHFPASLLDL 60
           MEEQF+LRVPPSV+ERI+RLL+E+AS+S++  LDL FSEDGR+GTF IG+D FPASLLDL
Sbjct: 1   MEEQFILRVPPSVSERIDRLLSEDASTSDEIPLDLFFSEDGRNGTFMIGNDEFPASLLDL 60

Query: 61  PCVVESYKTYDDTVLIKAADIGQMIMVREPGDPAPDSTEYRHGLTPPMRDARKRRFRREP 120
           P VVES+KTYDD  L+K ADIGQMIMVREPGDPAP++ EYRHGLTPPM+DARKRRFRREP
Sbjct: 61  PAVVESFKTYDDCALVKTADIGQMIMVREPGDPAPNTVEYRHGLTPPMKDARKRRFRREP 120

Query: 121 DLNPELVRRVEKDLLNIMAGGTTEN 146
           DLNPELV+RVE+DLLNI++GGT EN
Sbjct: 121 DLNPELVQRVERDLLNILSGGTVEN 145

The following BLAST results are available for this feature:

BLAST of Pay0020532 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9DG24	3.2e-62	79.31	Transcription initiation factor TFIID subunit 7 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9D3R9	8.5e-15	30.32	Transcription initiation factor TFIID subunit 7-like OS=Mus musculus OX=10090 GN...	[more]
Q9R1C0	7.2e-14	28.65	Transcription initiation factor TFIID subunit 7 OS=Mus musculus OX=10090 GN=Taf7...	[more]
Q6R1L1	2.7e-13	29.73	Transcription initiation factor TFIID subunit 7 OS=Cricetulus griseus OX=10029 G...	[more]
Q15545	6.1e-13	28.11	Transcription initiation factor TFIID subunit 7 OS=Homo sapiens OX=9606 GN=TAF7 ...	[more]

BLAST of Pay0020532 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C8V9	9.5e-102	95.15	transcription initiation factor TFIID subunit 7 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KSB3	2.2e-98	92.72	TAFII55_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517200 P...	[more]
A0A6J1JR83	1.5e-94	89.81	transcription initiation factor TFIID subunit 7 isoform X3 OS=Cucurbita maxima O...	[more]
A0A6J1H9I8	1.5e-94	89.81	transcription initiation factor TFIID subunit 7 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JHS5	1.5e-94	89.81	transcription initiation factor TFIID subunit 7 isoform X1 OS=Cucurbita maxima O...	[more]

BLAST of Pay0020532 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458871.1	2.0e-101	95.15	PREDICTED: transcription initiation factor TFIID subunit 7 [Cucumis melo] >XP_00...	[more]
XP_004142764.1	4.5e-98	92.72	transcription initiation factor TFIID subunit 7 [Cucumis sativus] >XP_011655371....	[more]
XP_038891097.1	8.5e-97	91.26	transcription initiation factor TFIID subunit 7 [Benincasa hispida] >XP_03889109...	[more]
XP_023516679.1	1.4e-94	90.29	transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022990129.1	3.0e-94	89.81	transcription initiation factor TFIID subunit 7 isoform X3 [Cucurbita maxima] >X...	[more]

BLAST of Pay0020532 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55300.1	3.4e-67	64.79	TBP-associated factor 7	[more]
AT1G55300.2	2.3e-63	79.31	TBP-associated factor 7	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006751	TAFII55 protein, conserved region	SMART	SM01370	TAFII55_N_2	coord: 1..145 e-value: 4.1E-61 score: 219.0
IPR006751	TAFII55 protein, conserved region	PFAM	PF04658	TAFII55_N	coord: 1..136 e-value: 3.4E-32 score: 111.4
IPR006751	TAFII55 protein, conserved region	CDD	cd08047	TAF7	coord: 2..151 e-value: 7.72086E-44 score: 142.023
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..206
None	No IPR available	PANTHER	PTHR12228:SF0	TAF7 RNA POLYMERASE II, TATA BOX-BINDING PROTEIN (TBP)-ASSOCIATED FACTOR	coord: 1..204
IPR037817	Transcription initiation factor TFIID subunit 7	PANTHER	PTHR12228	TRANSCRIPTION INITIATION FACTOR TFIID 55 KD SUBUNIT-RELATED	coord: 1..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0020532.1	Pay0020532.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051123	RNA polymerase II preinitiation complex assembly
biological_process	GO:0006413	translational initiation
biological_process	GO:0006367	transcription initiation from RNA polymerase II promoter
cellular_component	GO:0005669	transcription factor TFIID complex
molecular_function	GO:0016251	RNA polymerase II general transcription initiation factor activity
molecular_function	GO:0003743	translation initiation factor activity