Pay0020443 (gene) Melon (Payzawat) v1

Overview
NamePay0020443
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionDynein light chain
Locationchr11: 28972169 .. 28975007 (-)
RNA-Seq ExpressionPay0020443
SyntenyPay0020443
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGCCGCAATAAATTCCAAAAAGAGTTAAAAATCACTTTATCCTCTCAGATTCTGAGAGAACTCACGAGCTTTCCTTACAATTTCCACTCAAATCGATGAACTAATTCCAAATTTCTCCGAACAACAACAACTACTCGAACAGATTGTTTCCTCATATACCGTCGGTTCCGAACCCGCACCGGAGATCAGCAGAAAGAAAAAAAAAATGAGTAACGATGCTAAGAGAAGCATTCAAGGGAATCTAATGGTGAAATCTGTGTCGGAAGATCGGAAACCACCGGCTGTGACGGCTACTGGGAAGAAAATTGTTATCAAGAGTGCTGATATGTTTGGTGATGTGCAGAAAGAGGCTATCGATGTCGCCATAGCTGTAAGTTCTATTTTCTCGATCGCTATTTATTTATTTGTTTTTTTTTTGTTAATTTCGTATTTGAATTTCATATTTGGACTGTTGTTCTTTCTCATGATCTTTTGTGGATTTTTGTATTAGGCATTTGAAAAGCATAGTGTAGAGAAGGATATAGCAGAGTGTATTAAGAAAGAGTTTGATAAGAGACATGGACCGACCTGGCACTGCATTGTTGGCCGTAATTTTGGTAACTGATCTTCCTCTTCCTATAAAAATTCAGCTGACGTTTTTTGTGATTTTGCTGCTTGATAATGTGCCTTCTCGTTTCGACTTTGGTGCGAAGGTTTACATCGTGAATGGAATAGATCTACATTTTTAGGTTGCTTGGTAGAAGTGTTTGATCTGGTTAGATTACCTGCATTTGATAATAAGCGGTCCTTCCACAAGATTTAATTGAATTGAGCTGATTTAGAGTTGTTAAGACTAACTTTTACAGAGAACTTGAAAGTTTTTCTTCTCAATTTTGTTCATTCCCTTTCCTTCTATCCTCTGATGTTAGTCTTTCGTGAAATTTGAACTCAAATCACCATGGACTAATTTAATGTTATGAAGATGGTGGGTGTTTGTCGAGAAATTATTCAGTTAGGCTGCCACAATGTAGTGAATAGTTTCTTGTTATTGGATGCATGAGAGAAAAGTATCTTGAATTTATAGCCAAAGGTTATTAAGTGGCATGCAATTTTTTTAAATCAACACCCATTGGTTATTATATGTGACTGCCTCATGTCATGGTTGAGATTAGTCGTGTTGTAAATAAGTCGACACAAAGTTATCTTGAAAAAGAAACTGAAACTTTAACTTGTCCTGGTTGCTGCTGGATTAGAGGTTGTTGTTGAGTTGAACGGGTCTTCTTTTGTGGAAGACAGGAGTTATTTTGGTTTGCAAACTTTCCGGGATGGGTGGTTATCCTCTACTTAGAACAAGGGTAGTCCGTTCTCTGTCTTTGGTTGTTTGTTTTGAGGTTGTTGTATTTCATTTATTTTCCAAAGAAAAGAAAAAGAAACTGAAACTGTCGGCTCTTCTAGAAGTTAACTCAAACCCCTGAGCATAAGAACCCTTAACCCCTTAAAGCTGATTTCCATGGTAGGTGGTTTAACGTTTCTCAAGGCCAATAATTTTGTTTTCGGTTTTGAGTTGGCAACCCAATTAATGAAGGTCAAGGTGACAATGGAAAAGGGTCCCTTCCTTCTCGGGGGGTGAGAGAGAGTCTAATCTGTCCTCCATAACTTTAGTCAACTTCGTGCAGAACATTTATCTCCCTTTTTCTTCCCTTGTATAATTTGGTCCAGGTCTGAAAATGCTTACAATTTGCTTTCAATTCCCTTCTATTGCATTCGACAAGAGAAAATAGTGGATTTCTTGATATTTCTTGAGCCGAGTGGTCAATGTCAATGACAATGTTATCATTATCAACATGTATGGCTAGTAATTAGGCTCTATTCTTCAAATGTTCCATATTTTGTCTACTCTCTTTTTGAGCAACAAAATCTCATGGTTACTCCATGTAAATTTATCTATCTTTGTGAGTGAAGACATTTGTAACATCAAGCTGGTGCAAATACCAATTATGTGTTGCGTCCGACAAGGTGAATACTGTGATACAAGTCTATCATATAAGGTTTCAAAATTGGAGATCATCTTTGTGATTGAAAATATCATTCTTTAACATCAACGGGGTATTTGAACCACCAACTTCAAGTGGGTGGATCAGACTATTGTATTATAGTCCACCTCAAGTTGGAGTTTTCAATTATTATAACCTATAATTAACTACATTATTACTGTTTCAAATTCTTCTTTGTTACTCTTTTTACTATTTCTTATTTATTCTCTCTCTTGGTTATAGTGTTTACTATTTCCTACCCAAACTGAAATAGTTTGCACCTCAAAGAAGTGAACTATTATAACCTTCAAACCCACTTAATATAATAACCAATTCAGTGTCCTAAAATACTTCCCAAATTGATATCACGTTGAGTAGTGGCCATTAAAATGAAAGTCGATCATTTAAGTGGTTTAGGGTCGGGGGTTTCTCTTACAATCAAAACTTATAAAGCTACCTAAAACAGTGTGGATTAGATCCATGGTCCTGAATGTTGAACTTTCTGGTGTTTCTATGACAGGTTCGTACGTGACACACGAGACAAACCACTTTGTTTACTTCTACTTGGATCAGAAAGCAGTTTTGTTGTTTAAATCTGGTTGATAAACATGTATATTATGCAGATTAATGAATCTTATTAACTGATTTTATGATCATCGCAGTTTAATCAAATGATGATATCCTTTGTGGACAAGACAGCCTTCCCTTTTTCCACATCTCTTTTTTCTCGTATCTAATGATTTTGCTTAGGACACTTCAGCCTTTATATTAGACATAATCAGCTTTGTTCACACGCATTCTGTTCAAAAGTAGTTTTCATTTTCC

mRNA sequence

AAAGCCGCAATAAATTCCAAAAAGAGTTAAAAATCACTTTATCCTCTCAGATTCTGAGAGAACTCACGAGCTTTCCTTACAATTTCCACTCAAATCGATGAACTAATTCCAAATTTCTCCGAACAACAACAACTACTCGAACAGATTGTTTCCTCATATACCGTCGGTTCCGAACCCGCACCGGAGATCAGCAGAAAGAAAAAAAAAATGAGTAACGATGCTAAGAGAAGCATTCAAGGGAATCTAATGGTGAAATCTGTGTCGGAAGATCGGAAACCACCGGCTGTGACGGCTACTGGGAAGAAAATTGTTATCAAGAGTGCTGATATGTTTGGTGATGTGCAGAAAGAGGCTATCGATGTCGCCATAGCTGCATTTGAAAAGCATAGTGTAGAGAAGGATATAGCAGAGTGTATTAAGAAAGAGTTTGATAAGAGACATGGACCGACCTGGCACTGCATTGTTGGCCGTAATTTTGGTTCGTACGTGACACACGAGACAAACCACTTTGTTTACTTCTACTTGGATCAGAAAGCAGTTTTGTTGTTTAAATCTGGTTGATAAACATGTATATTATGCAGATTAATGAATCTTATTAACTGATTTTATGATCATCGCAGTTTAATCAAATGATGATATCCTTTGTGGACAAGACAGCCTTCCCTTTTTCCACATCTCTTTTTTCTCGTATCTAATGATTTTGCTTAGGACACTTCAGCCTTTATATTAGACATAATCAGCTTTGTTCACACGCATTCTGTTCAAAAGTAGTTTTCATTTTCC

Coding sequence (CDS)

ATGAGTAACGATGCTAAGAGAAGCATTCAAGGGAATCTAATGGTGAAATCTGTGTCGGAAGATCGGAAACCACCGGCTGTGACGGCTACTGGGAAGAAAATTGTTATCAAGAGTGCTGATATGTTTGGTGATGTGCAGAAAGAGGCTATCGATGTCGCCATAGCTGCATTTGAAAAGCATAGTGTAGAGAAGGATATAGCAGAGTGTATTAAGAAAGAGTTTGATAAGAGACATGGACCGACCTGGCACTGCATTGTTGGCCGTAATTTTGGTTCGTACGTGACACACGAGACAAACCACTTTGTTTACTTCTACTTGGATCAGAAAGCAGTTTTGTTGTTTAAATCTGGTTGA

Protein sequence

MSNDAKRSIQGNLMVKSVSEDRKPPAVTATGKKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG
Homology
[Close]
BLAST of Pay0020443 vs. ExPASy Swiss-Prot
Match: Q22799 (Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.8e-30
Identity = 61/86 (70.93%), Postives = 73/86 (84.88%), Query Frame = 0 

Query: 32  KKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFG 91
           +K VIK+ADM  D+Q++AID A  A EK+++EKDIA  IKKEFDK++ PTWHCIVGRNFG
Sbjct: 4   RKAVIKNADMSDDMQQDAIDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFG 63

Query: 92  SYVTHETNHFVYFYLDQKAVLLFKSG 118
           SYVTHET HF+YFYL Q A+LLFKSG
Sbjct: 64  SYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]
BLAST of Pay0020443 vs. ExPASy Swiss-Prot
Match: Q3MHR3 (Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.1e-30
Identity = 60/86 (69.77%), Postives = 73/86 (84.88%), Query Frame = 0 

Query: 32  KKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFG 91
           +K VIK+ADM  D+Q++A+D A  A EK+++EKDIA  IKKEFDK++ PTWHCIVGRNFG
Sbjct: 4   RKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFG 63

Query: 92  SYVTHETNHFVYFYLDQKAVLLFKSG 118
           SYVTHET HF+YFYL Q A+LLFKSG
Sbjct: 64  SYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]
BLAST of Pay0020443 vs. ExPASy Swiss-Prot
Match: Q96FJ2 (Dynein light chain 2, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL2 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.1e-30
Identity = 60/86 (69.77%), Postives = 73/86 (84.88%), Query Frame = 0 

Query: 32  KKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFG 91
           +K VIK+ADM  D+Q++A+D A  A EK+++EKDIA  IKKEFDK++ PTWHCIVGRNFG
Sbjct: 4   RKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFG 63

Query: 92  SYVTHETNHFVYFYLDQKAVLLFKSG 118
           SYVTHET HF+YFYL Q A+LLFKSG
Sbjct: 64  SYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]
BLAST of Pay0020443 vs. ExPASy Swiss-Prot
Match: Q9D0M5 (Dynein light chain 2, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll2 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.1e-30
Identity = 60/86 (69.77%), Postives = 73/86 (84.88%), Query Frame = 0 

Query: 32  KKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFG 91
           +K VIK+ADM  D+Q++A+D A  A EK+++EKDIA  IKKEFDK++ PTWHCIVGRNFG
Sbjct: 4   RKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFG 63

Query: 92  SYVTHETNHFVYFYLDQKAVLLFKSG 118
           SYVTHET HF+YFYL Q A+LLFKSG
Sbjct: 64  SYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]
BLAST of Pay0020443 vs. ExPASy Swiss-Prot
Match: Q78P75 (Dynein light chain 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll2 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.1e-30
Identity = 60/86 (69.77%), Postives = 73/86 (84.88%), Query Frame = 0 

Query: 32  KKIVIKSADMFGDVQKEAIDVAIAAFEKHSVEKDIAECIKKEFDKRHGPTWHCIVGRNFG 91
           +K VIK+ADM  D+Q++A+D A  A EK+++EKDIA  IKKEFDK++ PTWHCIVGRNFG
Sbjct: 4   RKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFG 63

Query: 92  SYVTHETNHFVYFYLDQKAVLLFKSG 118
           SYVTHET HF+YFYL Q A+LLFKSG
Sbjct: 64  SYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]
BLAST of Pay0020443 vs. ExPASy TrEMBL
Match: A0A1S3C7T8 (Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103497840 PE=3 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 3.3e-59
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0 

Query: 1   MSNDAKRSIQGNLMVKSVSEDRKPPAVTATGKKIVIKSADMFGDVQKEAIDVAIAAFEKH 60
           MSNDAKRSIQGNLMVKSVSEDRKPPAVTATGKKIVIKSADMFGDVQKEAIDVAIAAFEKH
Sbjct: 1   MSNDAKRSIQGNLMVKSVSEDRKPPAVTATGKKIVIKSADMFGDVQKEAIDVAIAAFEKH 60

Query: 61  SVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
           SVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG
Sbjct: 61  SVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 117

[Close]
BLAST of Pay0020443 vs. ExPASy TrEMBL
Match: A0A0A0KCI4 (Dynein light chain OS=Cucumis sativus OX=3659 GN=Csa_6G319760 PE=3 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 3.1e-57
Identity = 113/117 (96.58%), Postives = 115/117 (98.29%), Query Frame = 0 

Query: 1   MSNDAKRSIQGNLMVKSVSEDRKPPAVTATGKKIVIKSADMFGDVQKEAIDVAIAAFEKH 60
           MSNDAKRSIQG L+VKSVSEDRKPPAVT TGKKIVIKSADMFGDVQK+AIDVAIAAFEKH
Sbjct: 1   MSNDAKRSIQGTLLVKSVSEDRKPPAVTTTGKKIVIKSADMFGDVQKKAIDVAIAAFEKH 60

Query: 61  SVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
           SVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG
Sbjct: 61  SVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 117

[Close]
BLAST of Pay0020443 vs. ExPASy TrEMBL
Match: A0A6J1H8A5 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111460475 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.3e-55
Identity = 112/117 (95.73%), Postives = 113/117 (96.58%), Query Frame = 0 

Query: 1   MSNDAKRSIQGNLMVKSVSEDRKPPAVTATGKKIVIKSADMFGDVQKEAIDVAIAAFEKH 60
           MSNDAKRSIQGNLMVKSVSEDRKP AV  TGKKIVIKSADMFGDVQKEAIDVAIAAFEKH
Sbjct: 1   MSNDAKRSIQGNLMVKSVSEDRKPLAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKH 60

Query: 61  SVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
           SVEKD+AE IKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG
Sbjct: 61  SVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 117

[Close]
BLAST of Pay0020443 vs. ExPASy TrEMBL
Match: A0A6J1L253 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111499159 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 8.4e-55
Identity = 110/117 (94.02%), Postives = 112/117 (95.73%), Query Frame = 0 

Query: 1   MSNDAKRSIQGNLMVKSVSEDRKPPAVTATGKKIVIKSADMFGDVQKEAIDVAIAAFEKH 60
           MSNDAKRSIQGNLMVKSVSEDRKP  +  TGKKIVIKSADMFGDVQKEAIDVAIAAFEKH
Sbjct: 1   MSNDAKRSIQGNLMVKSVSEDRKPLVMATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKH 60

Query: 61  SVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
           SVEKD+AE IKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG
Sbjct: 61  SVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 117

[Close]
BLAST of Pay0020443 vs. ExPASy TrEMBL
Match: A0A6J1EQC6 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111436746 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.2e-54
Identity = 108/117 (92.31%), Postives = 111/117 (94.87%), Query Frame = 0 

Query: 1   MSNDAKRSIQGNLMVKSVSEDRKPPAVTATGKKIVIKSADMFGDVQKEAIDVAIAAFEKH 60
           MSNDAKRSIQGN MVK+VSEDRKP AV  TGKKIVIKSADMFGDVQKEA+DVAI AFEKH
Sbjct: 1   MSNDAKRSIQGNQMVKTVSEDRKPMAVATTGKKIVIKSADMFGDVQKEAVDVAIVAFEKH 60

Query: 61  SVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
           SVEKD+AE IKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG
Sbjct: 61  SVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 117

[Close]
BLAST of Pay0020443 vs. NCBI nr
Match: XP_008458417.1 (PREDICTED: dynein light chain 1, cytoplasmic [Cucumis melo])

HSP 1 Score: 237.3 bits (604), Expect = 6.8e-59
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0 

Query: 1   MSNDAKRSIQGNLMVKSVSEDRKPPAVTATGKKIVIKSADMFGDVQKEAIDVAIAAFEKH 60
           MSNDAKRSIQGNLMVKSVSEDRKPPAVTATGKKIVIKSADMFGDVQKEAIDVAIAAFEKH
Sbjct: 1   MSNDAKRSIQGNLMVKSVSEDRKPPAVTATGKKIVIKSADMFGDVQKEAIDVAIAAFEKH 60

Query: 61  SVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
           SVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG
Sbjct: 61  SVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 117

[Close]
BLAST of Pay0020443 vs. NCBI nr
Match: XP_038906782.1 (dynein light chain 1, cytoplasmic-like [Benincasa hispida])

HSP 1 Score: 232.3 bits (591), Expect = 2.2e-57
Identity = 114/117 (97.44%), Postives = 115/117 (98.29%), Query Frame = 0 

Query: 1   MSNDAKRSIQGNLMVKSVSEDRKPPAVTATGKKIVIKSADMFGDVQKEAIDVAIAAFEKH 60
           MSNDAKRSIQGNLMVKSVSEDRKPPAV  TGKKIVIKSADMFGDVQKEAI+VAIAAFEKH
Sbjct: 1   MSNDAKRSIQGNLMVKSVSEDRKPPAVATTGKKIVIKSADMFGDVQKEAIEVAIAAFEKH 60

Query: 61  SVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
           SVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG
Sbjct: 61  SVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 117

[Close]
BLAST of Pay0020443 vs. NCBI nr
Match: XP_004150499.1 (dynein light chain 1, cytoplasmic [Cucumis sativus] >KGN47430.1 hypothetical protein Csa_021736 [Cucumis sativus])

HSP 1 Score: 230.7 bits (587), Expect = 6.4e-57
Identity = 113/117 (96.58%), Postives = 115/117 (98.29%), Query Frame = 0 

Query: 1   MSNDAKRSIQGNLMVKSVSEDRKPPAVTATGKKIVIKSADMFGDVQKEAIDVAIAAFEKH 60
           MSNDAKRSIQG L+VKSVSEDRKPPAVT TGKKIVIKSADMFGDVQK+AIDVAIAAFEKH
Sbjct: 1   MSNDAKRSIQGTLLVKSVSEDRKPPAVTTTGKKIVIKSADMFGDVQKKAIDVAIAAFEKH 60

Query: 61  SVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
           SVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG
Sbjct: 61  SVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 117

[Close]
BLAST of Pay0020443 vs. NCBI nr
Match: XP_022959519.1 (dynein light chain 1, cytoplasmic-like [Cucurbita moschata] >XP_023547610.1 dynein light chain 1, cytoplasmic-like [Cucurbita pepo subsp. pepo] >KAG6575076.1 Dynein light chain 1, cytoplasmic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 225.3 bits (573), Expect = 2.7e-55
Identity = 112/117 (95.73%), Postives = 113/117 (96.58%), Query Frame = 0 

Query: 1   MSNDAKRSIQGNLMVKSVSEDRKPPAVTATGKKIVIKSADMFGDVQKEAIDVAIAAFEKH 60
           MSNDAKRSIQGNLMVKSVSEDRKP AV  TGKKIVIKSADMFGDVQKEAIDVAIAAFEKH
Sbjct: 1   MSNDAKRSIQGNLMVKSVSEDRKPLAVATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKH 60

Query: 61  SVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
           SVEKD+AE IKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG
Sbjct: 61  SVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 117

[Close]
BLAST of Pay0020443 vs. NCBI nr
Match: XP_023006429.1 (dynein light chain 1, cytoplasmic [Cucurbita maxima])

HSP 1 Score: 222.6 bits (566), Expect = 1.7e-54
Identity = 110/117 (94.02%), Postives = 112/117 (95.73%), Query Frame = 0 

Query: 1   MSNDAKRSIQGNLMVKSVSEDRKPPAVTATGKKIVIKSADMFGDVQKEAIDVAIAAFEKH 60
           MSNDAKRSIQGNLMVKSVSEDRKP  +  TGKKIVIKSADMFGDVQKEAIDVAIAAFEKH
Sbjct: 1   MSNDAKRSIQGNLMVKSVSEDRKPLVMATTGKKIVIKSADMFGDVQKEAIDVAIAAFEKH 60

Query: 61  SVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
           SVEKD+AE IKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG
Sbjct: 61  SVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 117

[Close]
BLAST of Pay0020443 vs. TAIR 10
Match: AT4G15930.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 164.5 bits (415), Expect = 5.2e-41
Identity = 83/117 (70.94%), Postives = 98/117 (83.76%), Query Frame = 0 

Query: 6   KRSIQGNLMVKSVSEDRKP--PAVTAT---GKKIVIKSADMFGDVQKEAIDVAIAAFEKH 65
           K+S+ G    +++ +DR+   P V A+   GK+ VIKSADM  D+QKEAI++AI+AFEK+
Sbjct: 7   KKSVNGGAPAQTILDDRRSSLPEVEASPPAGKRAVIKSADMKDDMQKEAIEIAISAFEKY 66

Query: 66  SVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
           SVEKDIAE IKKEFDK+HG TWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG
Sbjct: 67  SVEKDIAENIKKEFDKKHGATWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 123

[Close]
BLAST of Pay0020443 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 78.2 bits (191), Expect = 4.9e-15
Identity = 48/108 (44.44%), Postives = 67/108 (62.04%), Query Frame = 0 

Query: 16  KSVSEDRKPPA--VTATGKKIVIK--SADMFGDVQKEAIDVA---IAAFEKHSVEKDIAE 75
           KSVS   +  A  + A  + + ++  +ADM G +Q  A   A   + + EK S  K +A 
Sbjct: 95  KSVSHVERDTAARIEAAAEMLTVRILAADMPGFMQAHAFRCARMTLDSLEKFS-SKHMAF 154

Query: 76  CIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKS 117
            +KKEFDK +GP WHCIVG +FGS+VTH T  F+YF +D+  VLLFK+
Sbjct: 155 NLKKEFDKGYGPAWHCIVGSSFGSFVTHSTGCFIYFSMDKLYVLLFKT 201

[Close]
BLAST of Pay0020443 vs. TAIR 10
Match: AT1G23220.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 74.7 bits (182), Expect = 5.5e-14
Identity = 31/53 (58.49%), Postives = 40/53 (75.47%), Query Frame = 0 

Query: 64  KDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKS 117
           K +A  +KK+FD  +GP WHCIVG +FGSYVTH T  F+YF +D+  VLLFK+
Sbjct: 69  KRLAHALKKDFDSAYGPAWHCIVGTSFGSYVTHSTGGFLYFQIDKVYVLLFKT 121

[Close]
BLAST of Pay0020443 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 66.2 bits (160), Expect = 1.9e-11
Identity = 35/85 (41.18%), Postives = 50/85 (58.82%), Query Frame = 0 

Query: 33  KIVIKSADMFGDVQKEAIDVAIAAFEKHSVE--KDIAECIKKEFDKRHGPTWHCIVGRNF 92
           K +++ +DM   +Q +A+  A  A +   V   K IA  IKKEFD+R+G  W C+VG NF
Sbjct: 5   KAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVVGSNF 64

Query: 93  GSYVTHETNHFVYFYLDQKAVLLFK 116
           G + TH    F+YF L+    L+FK
Sbjct: 65  GCFFTHSKGTFIYFQLETLKFLIFK 89

[Close]
BLAST of Pay0020443 vs. TAIR 10
Match: AT4G27360.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 64.7 bits (156), Expect = 5.7e-11
Identity = 34/85 (40.00%), Postives = 52/85 (61.18%), Query Frame = 0 

Query: 33  KIVIKSADMFGDVQKEAIDVAIAAFEKHSVEK--DIAECIKKEFDKRHGPTWHCIVGRNF 92
           K V+   DM   ++++A+ +A  A +   V +   IA  IKKEFD+ +G  W CIVG +F
Sbjct: 5   KAVMGDTDMKQTMKEDALSLASKALDCFDVTEPTQIARFIKKEFDRSYGSGWQCIVGTHF 64

Query: 93  GSYVTHETNHFVYFYLDQKAVLLFK 116
           GS+VTH +  F++F +    +LLFK
Sbjct: 65  GSFVTHCSGCFIHFSVGSLTILLFK 89

The following BLAST results are available for this feature:
BLAST of Pay0020443 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q227991.8e-3070.93Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=... [more]
Q3MHR33.1e-3069.77Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1[more]
Q96FJ23.1e-3069.77Dynein light chain 2, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL2 PE=1 SV=1[more]
Q9D0M53.1e-3069.77Dynein light chain 2, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll2 PE=1 SV=1[more]
Q78P753.1e-3069.77Dynein light chain 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll2 PE=1 S... [more]
BLAST of Pay0020443 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3C7T83.3e-59100.00Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103497840 PE=3 SV=1[more]
A0A0A0KCI43.1e-5796.58Dynein light chain OS=Cucumis sativus OX=3659 GN=Csa_6G319760 PE=3 SV=1[more]
A0A6J1H8A51.3e-5595.73Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111460475 PE=3 SV=1[more]
A0A6J1L2538.4e-5594.02Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111499159 PE=3 SV=1[more]
A0A6J1EQC64.2e-5492.31Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111436746 PE=3 SV=1[more]
BLAST of Pay0020443 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008458417.16.8e-59100.00PREDICTED: dynein light chain 1, cytoplasmic [Cucumis melo][more]
XP_038906782.12.2e-5797.44dynein light chain 1, cytoplasmic-like [Benincasa hispida][more]
XP_004150499.16.4e-5796.58dynein light chain 1, cytoplasmic [Cucumis sativus] >KGN47430.1 hypothetical pro... [more]
XP_022959519.12.7e-5595.73dynein light chain 1, cytoplasmic-like [Cucurbita moschata] >XP_023547610.1 dyne... [more]
XP_023006429.11.7e-5494.02dynein light chain 1, cytoplasmic [Cucurbita maxima][more]
BLAST of Pay0020443 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G15930.15.2e-4170.94Dynein light chain type 1 family protein [more]
AT5G20110.14.9e-1544.44Dynein light chain type 1 family protein [more]
AT1G23220.15.5e-1458.49Dynein light chain type 1 family protein [more]
AT1G52240.21.9e-1141.18RHO guanyl-nucleotide exchange factor 11 [more]
AT4G27360.15.7e-1140.00Dynein light chain type 1 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001372Dynein light chain, type 1/2SMARTSM01375Dynein_light_2coord: 29..116
e-value: 6.6E-50
score: 181.8
IPR001372Dynein light chain, type 1/2PFAMPF01221Dynein_lightcoord: 33..116
e-value: 6.9E-37
score: 125.7
IPR001372Dynein light chain, type 1/2PANTHERPTHR11886DYNEIN LIGHT CHAINcoord: 23..117
IPR037177Dynein light chain superfamilyGENE3D3.30.740.10Protein Inhibitor Of Neuronal Nitric Oxide Synthase;coord: 30..117
e-value: 4.0E-39
score: 134.7
IPR037177Dynein light chain superfamilySUPERFAMILY54648DLCcoord: 30..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availablePANTHERPTHR11886:SF95DYNEIN LIGHT CHAINcoord: 23..117
IPR019763Dynein light chain, type 1/2, conserved sitePROSITEPS01239DYNEIN_LIGHT_1coord: 83..97

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0020443.1Pay0020443.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007017 microtubule-based process
cellular_component GO:0005737 cytoplasm
cellular_component GO:0030286 dynein complex
cellular_component GO:0005874 microtubule
cellular_component GO:0005875 microtubule associated complex
molecular_function GO:0045505 dynein intermediate chain binding
molecular_function GO:0051959 dynein light intermediate chain binding