Pay0020401 (gene) Melon (Payzawat) v1

Overview


Name	Pay0020401
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Reverse transcriptase Ty1/copia-type domain-containing protein
Location	chr11: 8434093 .. 8434992 (+)
RNA-Seq Expression	Pay0020401
Synteny	Pay0020401

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTATCATGAACCTTACCCATAAGGCTGGTTTGGAAAAAACTATCTCAAATGTTGGCCCTTTTTATCCCCAGTTAATTAGAGAATTTATTGTTAATCTGCCTGATGATTTTAATGATCCAAGTAGTGTTAATTATCAGACGGTGCACATTAGAGGGTTCAAATTTGTGATTTCACCTGCTGTGATAAATGAGTTTCTTGGAAATACTGTTGATATTGACTACTCTTCATCATGTCCTACTACTGAGGTTTTAGCTAATGTCTTATCTGGAGGGACCTTGTCCACATGGCCTGTGAATGGAATCCCTGTAGCTGCTCTCAGCGTCAAGTATGCCATACTGCACAAGATTGGCATTGCCAATTGGTTCCCTTCCTCACATGCCTCAAGCATATCTGCTGCCTTAGATACATTCTTGTATCAAATTTGCAATAGTGATAAAGTAGATACGGGTGCCTTCATTTACAATCAACTGTTGACGCATGTTGGGTCGTTTAGGGTCAAGGTTCCCATTGCTTTTCCGAGGTTGTTCTCCAGTCTGCTACTTCATCTAAATGGAGTGGTGCTTACTGCATCTGATGCTCCTGGACCTGAACCTAAGACAATTGCACTTAGCTACAGACTCTTTCAAGGCAGTCATGTGCCTGATATTGACCATGATGTGCATCCAACTTGGGGCCCACGTATTTTTGACACTACTGACTGGGATGAATCTGCTGAAGGCTTCTATGTGGATCGTGAGTTAGCTACCCGCATTATTAATTCCTTGACTGCTGAATCTCGTGCACTGACTAACTCCATCACTCTATTGTCTGAACGTCGATTAGAGGTTGATGCTCTCATTCGACATTTGAAGTCTTCGGCACCATCTACTAGTCGTCAGCAGCCACCATCTGGTTAA

mRNA sequence

ATGAGTATCATGAACCTTACCCATAAGGCTGGTTTGGAAAAAACTATCTCAAATGTTGGCCCTTTTTATCCCCAGTTAATTAGAGAATTTATTGTTAATCTGCCTGATGATTTTAATGATCCAAGTAGTGTTAATTATCAGACGGTGCACATTAGAGGGTTCAAATTTGTGATTTCACCTGCTGTGATAAATGAGTTTCTTGGAAATACTGTTGATATTGACTACTCTTCATCATGTCCTACTACTGAGGTTTTAGCTAATGTCTTATCTGGAGGGACCTTGTCCACATGGCCTGTGAATGGAATCCCTGTAGCTGCTCTCAGCGTCAACATATCTGCTGCCTTAGATACATTCTTGTATCAAATTTGCAATAGTGATAAAGTAGATACGGGTGCCTTCATTTACAATCAACTGTTGACGCATGTTGGGTCGTTTAGGGTCAAGGTTCCCATTGCTTTTCCGAGGTTGTTCTCCAGTCTGCTACTTCATCTAAATGGAGTGGTGCTTACTGCATCTGATGCTCCTGGACCTGAACCTAAGACAATTGCACTTAGCTACAGACTCTTTCAAGGCAGTCATGTGCCTGATATTGACCATGATGTGCATCCAACTTGGGGCCCACGTATTTTTGACACTACTGACTGGGATGAATCTGCTGAAGGCTTCTATGTGGATCGTGAGTTAGCTACCCGCATTATTAATTCCTTGACTGCTGAATCTCGTGCACTGACTAACTCCATCACTCTATTGTCTGAACGTCGATTAGAGGTTGATGCTCTCATTCGACATTTGAAGTCTTCGGCACCATCTACTAGTCGTCAGCAGCCACCATCTGGTTAA

Coding sequence (CDS)

ATGAGTATCATGAACCTTACCCATAAGGCTGGTTTGGAAAAAACTATCTCAAATGTTGGCCCTTTTTATCCCCAGTTAATTAGAGAATTTATTGTTAATCTGCCTGATGATTTTAATGATCCAAGTAGTGTTAATTATCAGACGGTGCACATTAGAGGGTTCAAATTTGTGATTTCACCTGCTGTGATAAATGAGTTTCTTGGAAATACTGTTGATATTGACTACTCTTCATCATGTCCTACTACTGAGGTTTTAGCTAATGTCTTATCTGGAGGGACCTTGTCCACATGGCCTGTGAATGGAATCCCTGTAGCTGCTCTCAGCGTCAACATATCTGCTGCCTTAGATACATTCTTGTATCAAATTTGCAATAGTGATAAAGTAGATACGGGTGCCTTCATTTACAATCAACTGTTGACGCATGTTGGGTCGTTTAGGGTCAAGGTTCCCATTGCTTTTCCGAGGTTGTTCTCCAGTCTGCTACTTCATCTAAATGGAGTGGTGCTTACTGCATCTGATGCTCCTGGACCTGAACCTAAGACAATTGCACTTAGCTACAGACTCTTTCAAGGCAGTCATGTGCCTGATATTGACCATGATGTGCATCCAACTTGGGGCCCACGTATTTTTGACACTACTGACTGGGATGAATCTGCTGAAGGCTTCTATGTGGATCGTGAGTTAGCTACCCGCATTATTAATTCCTTGACTGCTGAATCTCGTGCACTGACTAACTCCATCACTCTATTGTCTGAACGTCGATTAGAGGTTGATGCTCTCATTCGACATTTGAAGTCTTCGGCACCATCTACTAGTCGTCAGCAGCCACCATCTGGTTAA

Protein sequence

MSIMNLTHKAGLEKTISNVGPFYPQLIREFIVNLPDDFNDPSSVNYQTVHIRGFKFVISPAVINEFLGNTVDIDYSSSCPTTEVLANVLSGGTLSTWPVNGIPVAALSVNISAALDTFLYQICNSDKVDTGAFIYNQLLTHVGSFRVKVPIAFPRLFSSLLLHLNGVVLTASDAPGPEPKTIALSYRLFQGSHVPDIDHDVHPTWGPRIFDTTDWDESAEGFYVDRELATRIINSLTAESRALTNSITLLSERRLEVDALIRHLKSSAPSTSRQQPPSG

Homology

[Close]

BLAST of Pay0020401 vs. ExPASy TrEMBL
Match: A0A1S3CHW3 (uncharacterized protein LOC103501137 OS=Cucumis melo OX=3656 GN=LOC103501137 PE=4 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 4.4e-150
Identity = 275/296 (92.91%), Postives = 276/296 (93.24%), Query Frame = 0


Query: 4   MNLTHKAGLEKTISNVGPFYPQLIREFIVNLPDDFNDPSSVNYQTVHIRGFKFVISPAVI 63
           MNLTHKAGLEKTISNVGPFYPQLIREFIVNLPDDFNDPSSVNYQTVHIRGFKFVISPAVI
Sbjct: 1   MNLTHKAGLEKTISNVGPFYPQLIREFIVNLPDDFNDPSSVNYQTVHIRGFKFVISPAVI 60

Query: 64  NEFLGNTVDIDYSSSCPTTEVLANVLSGGTLSTWPVNGIPVAALSV-------------- 123
           NEFLGNTVDIDYSSSCPTTEVLANVLSGGTLSTWPVNGIPVAALSV              
Sbjct: 61  NEFLGNTVDIDYSSSCPTTEVLANVLSGGTLSTWPVNGIPVAALSVKYAILHKIGIANWF 120

Query: 124 ------NISAALDTFLYQICNSDKVDTGAFIYNQLLTHVGSFRVKVPIAFPRLFSSLLLH 183
                 +ISAALDTFLYQICNSDKVDTGAFIYNQLLTHVGSFRVKVPIAFPRLFSSLLLH
Sbjct: 121 PSSHASSISAALDTFLYQICNSDKVDTGAFIYNQLLTHVGSFRVKVPIAFPRLFSSLLLH 180

Query: 184 LNGVVLTASDAPGPEPKTIALSYRLFQGSHVPDIDHDVHPTWGPRIFDTTDWDESAEGFY 243
           LNGVVLTASDAPGPEPKTIALSYRLFQGSHVPDIDHDVHPTWGPRIFDTTDWDESAEGFY
Sbjct: 181 LNGVVLTASDAPGPEPKTIALSYRLFQGSHVPDIDHDVHPTWGPRIFDTTDWDESAEGFY 240

Query: 244 VDRELATRIINSLTAESRALTNSITLLSERRLEVDALIRHLKSSAPSTSRQQPPSG 280
           VDRELATRIINSLTAESRALTNSITLLSERRLEVDALIRHLKSSAPSTSRQQPPSG
Sbjct: 241 VDRELATRIINSLTAESRALTNSITLLSERRLEVDALIRHLKSSAPSTSRQQPPSG 296

[Close]

BLAST of Pay0020401 vs. ExPASy TrEMBL
Match: A0A5D3BS10 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00380 PE=4 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 2.1e-136
Identity = 253/275 (92.00%), Postives = 255/275 (92.73%), Query Frame = 0


Query: 25  QLIREFIVNLPDDFNDPSSVNYQTVHIRGFKFVISPAVINEFLGNTVDIDYSSSCPTTEV 84
           +LIREFIVNLPDDFNDPSSVNYQTVHIRGFKFVISPAVINEFLGNTVDIDYSSSCPTTEV
Sbjct: 253 ELIREFIVNLPDDFNDPSSVNYQTVHIRGFKFVISPAVINEFLGNTVDIDYSSSCPTTEV 312

Query: 85  LANVLSGGTLSTWPVNGIPVAALSV--------------------NISAALDTFLYQICN 144
           LANVLSGGTLSTWPVNGIPVAALSV                    +ISAALDTFLYQICN
Sbjct: 313 LANVLSGGTLSTWPVNGIPVAALSVKYAILHKIGIANWFPSSHASSISAALDTFLYQICN 372

Query: 145 SDKVDTGAFIYNQLLTHVGSFRVKVPIAFPRLFSSLLLHLNGVVLTASDAPGPEPKTIAL 204
           SDKVDTGAFIYNQLLTHVGSFRVKVPIAFPRLFSSLLLHLNGVVLTASDAPGPEPKTIAL
Sbjct: 373 SDKVDTGAFIYNQLLTHVGSFRVKVPIAFPRLFSSLLLHLNGVVLTASDAPGPEPKTIAL 432

Query: 205 SYRLFQGSHVPDIDHDVHPTWGPRIFDTTDWDESAEGFYVDRELATRIINSLTAESRALT 264
           SYRLFQGSHVPDIDHDVHPTWGPRIFDTTDWDESAEGFYVDRELATRIINSLTAESRALT
Sbjct: 433 SYRLFQGSHVPDIDHDVHPTWGPRIFDTTDWDESAEGFYVDRELATRIINSLTAESRALT 492

Query: 265 NSITLLSERRLEVDALIRHLKSSAPSTSRQQPPSG 280
           NSITLLSERRLEVDALIRHLKSSAPSTSRQQPPSG
Sbjct: 493 NSITLLSERRLEVDALIRHLKSSAPSTSRQQPPSG 527

[Close]

BLAST of Pay0020401 vs. ExPASy TrEMBL
Match: A0A5A7VJ79 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G004820 PE=4 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 2.1e-136
Identity = 253/275 (92.00%), Postives = 255/275 (92.73%), Query Frame = 0


Query: 25  QLIREFIVNLPDDFNDPSSVNYQTVHIRGFKFVISPAVINEFLGNTVDIDYSSSCPTTEV 84
           +LIREFIVNLPDDFNDPSSVNYQTVHIRGFKFVISPAVINEFLGNTVDIDYSSSCPTTEV
Sbjct: 253 ELIREFIVNLPDDFNDPSSVNYQTVHIRGFKFVISPAVINEFLGNTVDIDYSSSCPTTEV 312

Query: 85  LANVLSGGTLSTWPVNGIPVAALSV--------------------NISAALDTFLYQICN 144
           LANVLSGGTLSTWPVNGIPVAALSV                    +ISAALDTFLYQICN
Sbjct: 313 LANVLSGGTLSTWPVNGIPVAALSVKYAILHKIGIANWFPSSHASSISAALDTFLYQICN 372

Query: 145 SDKVDTGAFIYNQLLTHVGSFRVKVPIAFPRLFSSLLLHLNGVVLTASDAPGPEPKTIAL 204
           SDKVDTGAFIYNQLLTHVGSFRVKVPIAFPRLFSSLLLHLNGVVLTASDAPGPEPKTIAL
Sbjct: 373 SDKVDTGAFIYNQLLTHVGSFRVKVPIAFPRLFSSLLLHLNGVVLTASDAPGPEPKTIAL 432

Query: 205 SYRLFQGSHVPDIDHDVHPTWGPRIFDTTDWDESAEGFYVDRELATRIINSLTAESRALT 264
           SYRLFQGSHVPDIDHDVHPTWGPRIFDTTDWDESAEGFYVDRELATRIINSLTAESRALT
Sbjct: 433 SYRLFQGSHVPDIDHDVHPTWGPRIFDTTDWDESAEGFYVDRELATRIINSLTAESRALT 492

Query: 265 NSITLLSERRLEVDALIRHLKSSAPSTSRQQPPSG 280
           NSITLLSERRLEVDALIRHLKSSAPSTSRQQPPSG
Sbjct: 493 NSITLLSERRLEVDALIRHLKSSAPSTSRQQPPSG 527

[Close]

BLAST of Pay0020401 vs. ExPASy TrEMBL
Match: A0A5D3E001 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1228G00270 PE=4 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 3.5e-131
Identity = 249/299 (83.28%), Postives = 258/299 (86.29%), Query Frame = 0


Query: 1   MSIMNLTHKAGLEKTISNVGPFYPQLIREFIVNLPDDFNDPSSVNYQTVHIRGFKFVISP 60
           MSIMNL HKAGL+KTISNVGPFYPQLIREFIVNLPD+FNDPSS +Y TVHIRGFKFVISP
Sbjct: 1   MSIMNLIHKAGLKKTISNVGPFYPQLIREFIVNLPDEFNDPSSADYHTVHIRGFKFVISP 60

Query: 61  AVINEFLGNTVDIDYSSSCPTTEVLANVLSGGTLSTWPVNGIPVAALSV----------- 120
           AVIN FLGNTVDID S SCPTT+VLANVL GGTLSTW VNGIP AALSV           
Sbjct: 61  AVINGFLGNTVDIDCSPSCPTTKVLANVLFGGTLSTWLVNGIPTAALSVKYAILHKIGIA 120

Query: 121 ---------NISAALDTFLYQICNSDKVDTGAFIYNQLLTHVGSFRVKVPIAFPRLFSSL 180
                    +IS AL TFLYQICNSDKVDTGAFIYNQLL HVGSF VKVPIAF RLFSSL
Sbjct: 121 NWFPSLHASSISVALGTFLYQICNSDKVDTGAFIYNQLLRHVGSFGVKVPIAFSRLFSSL 180

Query: 181 LLHLNGVVLTASDAPGPEPKTIALSYRLFQGSHVPDIDHDVHPTWGPRIFDTTDWDESAE 240
           LL+LNG VLTASDAPGPEPKTIALSYRLFQGSH+PDIDHDVHPT GP IF+TTDWD+ AE
Sbjct: 181 LLYLNGAVLTASDAPGPEPKTIALSYRLFQGSHMPDIDHDVHPTRGPCIFETTDWDDFAE 240

Query: 241 GFYVDRELATRIINSLTAESRALTNSITLLSERRLEVDALIRHLKSSAPSTSRQQPPSG 280
           GFYVDRELATRIINSLTAES ALTNSITLLSERRLEVDALIRHLKSSA STSRQQP SG
Sbjct: 241 GFYVDRELATRIINSLTAESHALTNSITLLSERRLEVDALIRHLKSSALSTSRQQPSSG 299

[Close]

BLAST of Pay0020401 vs. ExPASy TrEMBL
Match: A0A5A7TDT9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00530 PE=4 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 5.5e-129
Identity = 243/299 (81.27%), Postives = 251/299 (83.95%), Query Frame = 0


Query: 1   MSIMNLTHKAGLEKTISNVGPFYPQLIREFIVNLPDDFNDPSSVNYQTVHIRGFKFVISP 60
           MSIM+L HKAGLEKTISNVGPFYPQLIREFIVNLPD+FN+PSS +YQTVHIRGFKFVISP
Sbjct: 1   MSIMDLIHKAGLEKTISNVGPFYPQLIREFIVNLPDEFNNPSSADYQTVHIRGFKFVISP 60

Query: 61  AVINEFLGNTVDIDYSSSCPTTEVLANVLSGGTLSTWPVNGIPVAALSV----------- 120
             IN FLGNT+DID S SCP TEVLA VLSGGTLSTWP+NGIP AALSV           
Sbjct: 61  TAINGFLGNTIDIDCSRSCPITEVLATVLSGGTLSTWPMNGIPAAALSVKYVILHKIGIA 120

Query: 121 ---------NISAALDTFLYQICNSDKVDTGAFIYNQLLTHVGSFRVKVPIAFPRLFSSL 180
                    +IS AL  FLYQICN DKVDTGAFIYNQLL HVGSF VKVPIA  RLF SL
Sbjct: 121 NWFPSSHASSISVALGAFLYQICNDDKVDTGAFIYNQLLRHVGSFGVKVPIALLRLFFSL 180

Query: 181 LLHLNGVVLTASDAPGPEPKTIALSYRLFQGSHVPDIDHDVHPTWGPRIFDTTDWDESAE 240
           LLHLNG VLTASD P PEPKTIALSYRLFQG H+PDID DVHPTWGPRIFDT DWDESAE
Sbjct: 181 LLHLNGAVLTASDTPRPEPKTIALSYRLFQGIHMPDIDPDVHPTWGPRIFDTIDWDESAE 240

Query: 241 GFYVDRELATRIINSLTAESRALTNSITLLSERRLEVDALIRHLKSSAPSTSRQQPPSG 280
           GFYVDRELAT IINSLTAES ALTNSITLLSERRLEVDALIRHLKSSAPSTSRQ PPSG
Sbjct: 241 GFYVDRELATCIINSLTAESCALTNSITLLSERRLEVDALIRHLKSSAPSTSRQHPPSG 299

[Close]

BLAST of Pay0020401 vs. NCBI nr
Match: XP_008462856.1 (PREDICTED: uncharacterized protein LOC103501137 [Cucumis melo])

HSP 1 Score: 540.4 bits (1391), Expect = 9.0e-150
Identity = 275/296 (92.91%), Postives = 276/296 (93.24%), Query Frame = 0


Query: 4   MNLTHKAGLEKTISNVGPFYPQLIREFIVNLPDDFNDPSSVNYQTVHIRGFKFVISPAVI 63
           MNLTHKAGLEKTISNVGPFYPQLIREFIVNLPDDFNDPSSVNYQTVHIRGFKFVISPAVI
Sbjct: 1   MNLTHKAGLEKTISNVGPFYPQLIREFIVNLPDDFNDPSSVNYQTVHIRGFKFVISPAVI 60

Query: 64  NEFLGNTVDIDYSSSCPTTEVLANVLSGGTLSTWPVNGIPVAALSV-------------- 123
           NEFLGNTVDIDYSSSCPTTEVLANVLSGGTLSTWPVNGIPVAALSV              
Sbjct: 61  NEFLGNTVDIDYSSSCPTTEVLANVLSGGTLSTWPVNGIPVAALSVKYAILHKIGIANWF 120

Query: 124 ------NISAALDTFLYQICNSDKVDTGAFIYNQLLTHVGSFRVKVPIAFPRLFSSLLLH 183
                 +ISAALDTFLYQICNSDKVDTGAFIYNQLLTHVGSFRVKVPIAFPRLFSSLLLH
Sbjct: 121 PSSHASSISAALDTFLYQICNSDKVDTGAFIYNQLLTHVGSFRVKVPIAFPRLFSSLLLH 180

Query: 184 LNGVVLTASDAPGPEPKTIALSYRLFQGSHVPDIDHDVHPTWGPRIFDTTDWDESAEGFY 243
           LNGVVLTASDAPGPEPKTIALSYRLFQGSHVPDIDHDVHPTWGPRIFDTTDWDESAEGFY
Sbjct: 181 LNGVVLTASDAPGPEPKTIALSYRLFQGSHVPDIDHDVHPTWGPRIFDTTDWDESAEGFY 240

Query: 244 VDRELATRIINSLTAESRALTNSITLLSERRLEVDALIRHLKSSAPSTSRQQPPSG 280
           VDRELATRIINSLTAESRALTNSITLLSERRLEVDALIRHLKSSAPSTSRQQPPSG
Sbjct: 241 VDRELATRIINSLTAESRALTNSITLLSERRLEVDALIRHLKSSAPSTSRQQPPSG 296

[Close]

BLAST of Pay0020401 vs. NCBI nr
Match: TYK00879.1 (uncharacterized protein E5676_scaffold602G00380 [Cucumis melo var. makuwa])

HSP 1 Score: 495.0 bits (1273), Expect = 4.3e-136
Identity = 253/275 (92.00%), Postives = 255/275 (92.73%), Query Frame = 0


Query: 25  QLIREFIVNLPDDFNDPSSVNYQTVHIRGFKFVISPAVINEFLGNTVDIDYSSSCPTTEV 84
           +LIREFIVNLPDDFNDPSSVNYQTVHIRGFKFVISPAVINEFLGNTVDIDYSSSCPTTEV
Sbjct: 253 ELIREFIVNLPDDFNDPSSVNYQTVHIRGFKFVISPAVINEFLGNTVDIDYSSSCPTTEV 312

Query: 85  LANVLSGGTLSTWPVNGIPVAALSV--------------------NISAALDTFLYQICN 144
           LANVLSGGTLSTWPVNGIPVAALSV                    +ISAALDTFLYQICN
Sbjct: 313 LANVLSGGTLSTWPVNGIPVAALSVKYAILHKIGIANWFPSSHASSISAALDTFLYQICN 372

Query: 145 SDKVDTGAFIYNQLLTHVGSFRVKVPIAFPRLFSSLLLHLNGVVLTASDAPGPEPKTIAL 204
           SDKVDTGAFIYNQLLTHVGSFRVKVPIAFPRLFSSLLLHLNGVVLTASDAPGPEPKTIAL
Sbjct: 373 SDKVDTGAFIYNQLLTHVGSFRVKVPIAFPRLFSSLLLHLNGVVLTASDAPGPEPKTIAL 432

Query: 205 SYRLFQGSHVPDIDHDVHPTWGPRIFDTTDWDESAEGFYVDRELATRIINSLTAESRALT 264
           SYRLFQGSHVPDIDHDVHPTWGPRIFDTTDWDESAEGFYVDRELATRIINSLTAESRALT
Sbjct: 433 SYRLFQGSHVPDIDHDVHPTWGPRIFDTTDWDESAEGFYVDRELATRIINSLTAESRALT 492

Query: 265 NSITLLSERRLEVDALIRHLKSSAPSTSRQQPPSG 280
           NSITLLSERRLEVDALIRHLKSSAPSTSRQQPPSG
Sbjct: 493 NSITLLSERRLEVDALIRHLKSSAPSTSRQQPPSG 527

[Close]

BLAST of Pay0020401 vs. NCBI nr
Match: KAA0066406.1 (uncharacterized protein E6C27_scaffold21G004820 [Cucumis melo var. makuwa])

HSP 1 Score: 495.0 bits (1273), Expect = 4.3e-136
Identity = 253/275 (92.00%), Postives = 255/275 (92.73%), Query Frame = 0


Query: 25  QLIREFIVNLPDDFNDPSSVNYQTVHIRGFKFVISPAVINEFLGNTVDIDYSSSCPTTEV 84
           +LIREFIVNLPDDFNDPSSVNYQTVHIRGFKFVISPAVINEFLGNTVDIDYSSSCPTTEV
Sbjct: 253 ELIREFIVNLPDDFNDPSSVNYQTVHIRGFKFVISPAVINEFLGNTVDIDYSSSCPTTEV 312

Query: 85  LANVLSGGTLSTWPVNGIPVAALSV--------------------NISAALDTFLYQICN 144
           LANVLSGGTLSTWPVNGIPVAALSV                    +ISAALDTFLYQICN
Sbjct: 313 LANVLSGGTLSTWPVNGIPVAALSVKYAILHKIGIANWFPSSHASSISAALDTFLYQICN 372

Query: 145 SDKVDTGAFIYNQLLTHVGSFRVKVPIAFPRLFSSLLLHLNGVVLTASDAPGPEPKTIAL 204
           SDKVDTGAFIYNQLLTHVGSFRVKVPIAFPRLFSSLLLHLNGVVLTASDAPGPEPKTIAL
Sbjct: 373 SDKVDTGAFIYNQLLTHVGSFRVKVPIAFPRLFSSLLLHLNGVVLTASDAPGPEPKTIAL 432

Query: 205 SYRLFQGSHVPDIDHDVHPTWGPRIFDTTDWDESAEGFYVDRELATRIINSLTAESRALT 264
           SYRLFQGSHVPDIDHDVHPTWGPRIFDTTDWDESAEGFYVDRELATRIINSLTAESRALT
Sbjct: 433 SYRLFQGSHVPDIDHDVHPTWGPRIFDTTDWDESAEGFYVDRELATRIINSLTAESRALT 492

Query: 265 NSITLLSERRLEVDALIRHLKSSAPSTSRQQPPSG 280
           NSITLLSERRLEVDALIRHLKSSAPSTSRQQPPSG
Sbjct: 493 NSITLLSERRLEVDALIRHLKSSAPSTSRQQPPSG 527

[Close]

BLAST of Pay0020401 vs. NCBI nr
Match: TYK29236.1 (uncharacterized protein E5676_scaffold1228G00270 [Cucumis melo var. makuwa])

HSP 1 Score: 477.6 bits (1228), Expect = 7.2e-131
Identity = 249/299 (83.28%), Postives = 258/299 (86.29%), Query Frame = 0


Query: 1   MSIMNLTHKAGLEKTISNVGPFYPQLIREFIVNLPDDFNDPSSVNYQTVHIRGFKFVISP 60
           MSIMNL HKAGL+KTISNVGPFYPQLIREFIVNLPD+FNDPSS +Y TVHIRGFKFVISP
Sbjct: 1   MSIMNLIHKAGLKKTISNVGPFYPQLIREFIVNLPDEFNDPSSADYHTVHIRGFKFVISP 60

Query: 61  AVINEFLGNTVDIDYSSSCPTTEVLANVLSGGTLSTWPVNGIPVAALSV----------- 120
           AVIN FLGNTVDID S SCPTT+VLANVL GGTLSTW VNGIP AALSV           
Sbjct: 61  AVINGFLGNTVDIDCSPSCPTTKVLANVLFGGTLSTWLVNGIPTAALSVKYAILHKIGIA 120

Query: 121 ---------NISAALDTFLYQICNSDKVDTGAFIYNQLLTHVGSFRVKVPIAFPRLFSSL 180
                    +IS AL TFLYQICNSDKVDTGAFIYNQLL HVGSF VKVPIAF RLFSSL
Sbjct: 121 NWFPSLHASSISVALGTFLYQICNSDKVDTGAFIYNQLLRHVGSFGVKVPIAFSRLFSSL 180

Query: 181 LLHLNGVVLTASDAPGPEPKTIALSYRLFQGSHVPDIDHDVHPTWGPRIFDTTDWDESAE 240
           LL+LNG VLTASDAPGPEPKTIALSYRLFQGSH+PDIDHDVHPT GP IF+TTDWD+ AE
Sbjct: 181 LLYLNGAVLTASDAPGPEPKTIALSYRLFQGSHMPDIDHDVHPTRGPCIFETTDWDDFAE 240

Query: 241 GFYVDRELATRIINSLTAESRALTNSITLLSERRLEVDALIRHLKSSAPSTSRQQPPSG 280
           GFYVDRELATRIINSLTAES ALTNSITLLSERRLEVDALIRHLKSSA STSRQQP SG
Sbjct: 241 GFYVDRELATRIINSLTAESHALTNSITLLSERRLEVDALIRHLKSSALSTSRQQPSSG 299

[Close]

BLAST of Pay0020401 vs. NCBI nr
Match: KAA0041594.1 (uncharacterized protein E6C27_scaffold93G00610 [Cucumis melo var. makuwa] >TYK19661.1 uncharacterized protein E5676_scaffold242G00530 [Cucumis melo var. makuwa])

HSP 1 Score: 470.3 bits (1209), Expect = 1.1e-128
Identity = 243/299 (81.27%), Postives = 251/299 (83.95%), Query Frame = 0


Query: 1   MSIMNLTHKAGLEKTISNVGPFYPQLIREFIVNLPDDFNDPSSVNYQTVHIRGFKFVISP 60
           MSIM+L HKAGLEKTISNVGPFYPQLIREFIVNLPD+FN+PSS +YQTVHIRGFKFVISP
Sbjct: 1   MSIMDLIHKAGLEKTISNVGPFYPQLIREFIVNLPDEFNNPSSADYQTVHIRGFKFVISP 60

Query: 61  AVINEFLGNTVDIDYSSSCPTTEVLANVLSGGTLSTWPVNGIPVAALSV----------- 120
             IN FLGNT+DID S SCP TEVLA VLSGGTLSTWP+NGIP AALSV           
Sbjct: 61  TAINGFLGNTIDIDCSRSCPITEVLATVLSGGTLSTWPMNGIPAAALSVKYVILHKIGIA 120

Query: 121 ---------NISAALDTFLYQICNSDKVDTGAFIYNQLLTHVGSFRVKVPIAFPRLFSSL 180
                    +IS AL  FLYQICN DKVDTGAFIYNQLL HVGSF VKVPIA  RLF SL
Sbjct: 121 NWFPSSHASSISVALGAFLYQICNDDKVDTGAFIYNQLLRHVGSFGVKVPIALLRLFFSL 180

Query: 181 LLHLNGVVLTASDAPGPEPKTIALSYRLFQGSHVPDIDHDVHPTWGPRIFDTTDWDESAE 240
           LLHLNG VLTASD P PEPKTIALSYRLFQG H+PDID DVHPTWGPRIFDT DWDESAE
Sbjct: 181 LLHLNGAVLTASDTPRPEPKTIALSYRLFQGIHMPDIDPDVHPTWGPRIFDTIDWDESAE 240

Query: 241 GFYVDRELATRIINSLTAESRALTNSITLLSERRLEVDALIRHLKSSAPSTSRQQPPSG 280
           GFYVDRELAT IINSLTAES ALTNSITLLSERRLEVDALIRHLKSSAPSTSRQ PPSG
Sbjct: 241 GFYVDRELATCIINSLTAESCALTNSITLLSERRLEVDALIRHLKSSAPSTSRQHPPSG 299

The following BLAST results are available for this feature:

BLAST of Pay0020401 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0020401 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CHW3	4.4e-150	92.91	uncharacterized protein LOC103501137 OS=Cucumis melo OX=3656 GN=LOC103501137 PE=...	[more]
A0A5D3BS10	2.1e-136	92.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7VJ79	2.1e-136	92.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3E001	3.5e-131	83.28	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TDT9	5.5e-129	81.27	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Pay0020401 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462856.1	9.0e-150	92.91	PREDICTED: uncharacterized protein LOC103501137 [Cucumis melo]	[more]
TYK00879.1	4.3e-136	92.00	uncharacterized protein E5676_scaffold602G00380 [Cucumis melo var. makuwa]	[more]
KAA0066406.1	4.3e-136	92.00	uncharacterized protein E6C27_scaffold21G004820 [Cucumis melo var. makuwa]	[more]
TYK29236.1	7.2e-131	83.28	uncharacterized protein E5676_scaffold1228G00270 [Cucumis melo var. makuwa]	[more]
KAA0041594.1	1.1e-128	81.27	uncharacterized protein E6C27_scaffold93G00610 [Cucumis melo var. makuwa] >TYK19...	[more]

BLAST of Pay0020401 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0020401.1	Pay0020401.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003676	nucleic acid binding