Pay0020280 (gene) Melon (Payzawat) v1

Overview


Name	Pay0020280
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Reverse transcriptase
Location	chr08: 7735344 .. 7737620 (+)
RNA-Seq Expression	Pay0020280
Synteny	Pay0020280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTTGCAGACACTTCGGGATAATAAGTTATATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAACAGGTGTCTTTTCTGGGCCACGTGGTTTCTAAGGATGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCCCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGACCCTTAAACAGAAGCTAGTTACCGCGCCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTCGTGATTTATAGTGATGCTTCCAAGAAGGGTCTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACGGATCATAAGAGCTTAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCGAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCGGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGTGCAGTTACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACCTTGAGGCAGAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTCGTTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCGCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACTTAAAGCGGGTTTATTGGTGGCGTAACATGAAGAGAGAAGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCTTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACCGGGCTACCGAGAACTCTGAGGGGGTTTACAGTGATCTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTTGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTGCACGGAGTGCCAGTGTCGATTGTTTCTGACAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGATTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGCTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGATGAGGTAGGTGAGCAAAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGAGATACAGAAGATTAGATCACGCATGCATACCGCTCAGTGTAGGCAGAAGAGTTATGCAGATGTGAGGCGGAAGGATCTTGAGTTTGAGGTAGGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAAAGGTGTCTTACGTTTTGAAAGGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTAGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCTTCATCACTCTCGACAGTCCATGATGTGTTTCACGTCTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAAAACTTGAGCTATGTTGAACAACCTGTTGAGGTACTGGCTAGAGAGGTGAAAACGTTGAGGAATAAGGAAATCCCTCTGGTTAAAGTCTTATGGCGGAATCACCGGATAGAAGAGGCTACGTGGGAGCGAGAAGATGACATGAGGTCCCGTTATCCCGAACTGTTCGAAGGGTAA

mRNA sequence

ATGGTTTTGCAGACACTTCGGGATAATAAGTTATATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAACAGGTGTCTTTTCTGGGCCACGTGGTTTCTAAGGATGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCCCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGACCCTTAAACAGAAGCTAGTTACCGCGCCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTCGTGATTTATAGTGATGCTTCCAAGAAGGGTCTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGTGCAGTTACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACCTTGAGGCAGAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTCGTTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCGCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACTTAAAGCGGGTTTATTGGTGGCGTAACATGAAGAGAGAAGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCTTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACCGGGCTACCGAGAACTCTGAGGGGGTTTACAGTGATCTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTTGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTGCACGGAGTGCCAGTGTCGATTGTTTCTGACAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGATTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAAAGGTGTCTTACGTTTTGAAAGGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTAGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCTTCATCACTCTCGACAGTCCATGATGTGTTTCACGTCTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAAAACTTGAGCTATGTTGAACAACCTGTTGAGGTACTGGCTAGAGAGGTGAAAACGTTGAGGAATAAGGAAATCCCTCTGGTTAAAGTCTTATGGCGGAATCACCGGATAGAAGAGGCTACGTGGGAGCGAGAAGATGACATGAGGTCCCGTTATCCCGAACTGTTCGAAGGGTAA

Coding sequence (CDS)

ATGGTTTTGCAGACACTTCGGGATAATAAGTTATATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAACAGGTGTCTTTTCTGGGCCACGTGGTTTCTAAGGATGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCCCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGACCCTTAAACAGAAGCTAGTTACCGCGCCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTCGTGATTTATAGTGATGCTTCCAAGAAGGGTCTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGTGCAGTTACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACCTTGAGGCAGAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTCGTTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCGCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACTTAAAGCGGGTTTATTGGTGGCGTAACATGAAGAGAGAAGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCTTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACCGGGCTACCGAGAACTCTGAGGGGGTTTACAGTGATCTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTTGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTGCACGGAGTGCCAGTGTCGATTGTTTCTGACAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGATTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAAAGGTGTCTTACGTTTTGAAAGGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTAGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCTTCATCACTCTCGACAGTCCATGATGTGTTTCACGTCTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAAAACTTGAGCTATGTTGAACAACCTGTTGAGGTACTGGCTAGAGAGGTGAAAACGTTGAGGAATAAGGAAATCCCTCTGGTTAAAGTCTTATGGCGGAATCACCGGATAGAAGAGGCTACGTGGGAGCGAGAAGATGACATGAGGTCCCGTTATCCCGAACTGTTCGAAGGGTAA

Protein sequence

MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPSSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFEG

Homology

[Close]

BLAST of Pay0020280 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 5.1e-57
Identity = 154/567 (27.16%), Postives = 256/567 (45.15%), Query Frame = 0


Query: 2    VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRS 61
            VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R 
Sbjct: 585  VLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQ 644

Query: 62   FLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDG 121
            FLG   Y R+F+   S++  PL  L +K   + W+     + + +KQ LV+ PVL   D 
Sbjct: 645  FLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDF 704

Query: 122  SGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALK 181
            S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK
Sbjct: 705  SKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLK 764

Query: 182  IWRHYLYALI-----------------TRQAPLHRDLERAE------------------- 241
             WRHYL + I                     P ++ L R +                   
Sbjct: 765  HWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANH 824

Query: 242  IAVSVGAVTMQ---------------LAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG 301
            IA ++  +  +               + Q+++    + +++   +ND  L+    L    
Sbjct: 825  IADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 884

Query: 302  QTAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 361
            +  E ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + 
Sbjct: 885  KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 944

Query: 362  WRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF 421
            W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Sbjct: 945  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGY 1004

Query: 422  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK 481
              ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK
Sbjct: 1005 NALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWK 1064

Query: 482  GLQTAMGTRLDFSTAFHPQTDG---------DKVFLKVAP---------MKGVLRFERRG 493
                     + FS  + PQTDG         +K+   V           +  V +     
Sbjct: 1065 DFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNA 1124

[Close]

BLAST of Pay0020280 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 5.1e-57
Identity = 154/567 (27.16%), Postives = 256/567 (45.15%), Query Frame = 0


Query: 2    VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRS 61
            VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R 
Sbjct: 585  VLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQ 644

Query: 62   FLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDG 121
            FLG   Y R+F+   S++  PL  L +K   + W+     + + +KQ LV+ PVL   D 
Sbjct: 645  FLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDF 704

Query: 122  SGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALK 181
            S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK
Sbjct: 705  SKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLK 764

Query: 182  IWRHYLYALI-----------------TRQAPLHRDLERAE------------------- 241
             WRHYL + I                     P ++ L R +                   
Sbjct: 765  HWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANH 824

Query: 242  IAVSVGAVTMQ---------------LAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG 301
            IA ++  +  +               + Q+++    + +++   +ND  L+    L    
Sbjct: 825  IADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 884

Query: 302  QTAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 361
            +  E ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + 
Sbjct: 885  KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 944

Query: 362  WRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF 421
            W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Sbjct: 945  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGY 1004

Query: 422  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK 481
              ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK
Sbjct: 1005 NALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWK 1064

Query: 482  GLQTAMGTRLDFSTAFHPQTDG---------DKVFLKVAP---------MKGVLRFERRG 493
                     + FS  + PQTDG         +K+   V           +  V +     
Sbjct: 1065 DFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNA 1124

[Close]

BLAST of Pay0020280 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 5.1e-57
Identity = 154/567 (27.16%), Postives = 256/567 (45.15%), Query Frame = 0


Query: 2    VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRS 61
            VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R 
Sbjct: 585  VLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQ 644

Query: 62   FLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDG 121
            FLG   Y R+F+   S++  PL  L +K   + W+     + + +KQ LV+ PVL   D 
Sbjct: 645  FLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDF 704

Query: 122  SGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALK 181
            S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK
Sbjct: 705  SKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLK 764

Query: 182  IWRHYLYALI-----------------TRQAPLHRDLERAE------------------- 241
             WRHYL + I                     P ++ L R +                   
Sbjct: 765  HWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANH 824

Query: 242  IAVSVGAVTMQ---------------LAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG 301
            IA ++  +  +               + Q+++    + +++   +ND  L+    L    
Sbjct: 825  IADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 884

Query: 302  QTAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 361
            +  E ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + 
Sbjct: 885  KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 944

Query: 362  WRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF 421
            W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Sbjct: 945  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGY 1004

Query: 422  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK 481
              ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK
Sbjct: 1005 NALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWK 1064

Query: 482  GLQTAMGTRLDFSTAFHPQTDG---------DKVFLKVAP---------MKGVLRFERRG 493
                     + FS  + PQTDG         +K+   V           +  V +     
Sbjct: 1065 DFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNA 1124

[Close]

BLAST of Pay0020280 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 5.1e-57
Identity = 154/567 (27.16%), Postives = 256/567 (45.15%), Query Frame = 0


Query: 2    VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRS 61
            VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R 
Sbjct: 585  VLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQ 644

Query: 62   FLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDG 121
            FLG   Y R+F+   S++  PL  L +K   + W+     + + +KQ LV+ PVL   D 
Sbjct: 645  FLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDF 704

Query: 122  SGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALK 181
            S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK
Sbjct: 705  SKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLK 764

Query: 182  IWRHYLYALI-----------------TRQAPLHRDLERAE------------------- 241
             WRHYL + I                     P ++ L R +                   
Sbjct: 765  HWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANH 824

Query: 242  IAVSVGAVTMQ---------------LAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG 301
            IA ++  +  +               + Q+++    + +++   +ND  L+    L    
Sbjct: 825  IADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 884

Query: 302  QTAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 361
            +  E ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + 
Sbjct: 885  KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 944

Query: 362  WRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF 421
            W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Sbjct: 945  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGY 1004

Query: 422  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK 481
              ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK
Sbjct: 1005 NALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWK 1064

Query: 482  GLQTAMGTRLDFSTAFHPQTDG---------DKVFLKVAP---------MKGVLRFERRG 493
                     + FS  + PQTDG         +K+   V           +  V +     
Sbjct: 1065 DFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNA 1124

[Close]

BLAST of Pay0020280 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 5.1e-57
Identity = 154/567 (27.16%), Postives = 256/567 (45.15%), Query Frame = 0


Query: 2    VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRS 61
            VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R 
Sbjct: 585  VLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQ 644

Query: 62   FLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDG 121
            FLG   Y R+F+   S++  PL  L +K   + W+     + + +KQ LV+ PVL   D 
Sbjct: 645  FLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDF 704

Query: 122  SGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALK 181
            S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK
Sbjct: 705  SKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLK 764

Query: 182  IWRHYLYALI-----------------TRQAPLHRDLERAE------------------- 241
             WRHYL + I                     P ++ L R +                   
Sbjct: 765  HWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANH 824

Query: 242  IAVSVGAVTMQ---------------LAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG 301
            IA ++  +  +               + Q+++    + +++   +ND  L+    L    
Sbjct: 825  IADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 884

Query: 302  QTAEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 361
            +  E ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + 
Sbjct: 885  KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 944

Query: 362  WRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF 421
            W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Sbjct: 945  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGY 1004

Query: 422  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK 481
              ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK
Sbjct: 1005 NALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWK 1064

Query: 482  GLQTAMGTRLDFSTAFHPQTDG---------DKVFLKVAP---------MKGVLRFERRG 493
                     + FS  + PQTDG         +K+   V           +  V +     
Sbjct: 1065 DFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNA 1124

[Close]

BLAST of Pay0020280 vs. ExPASy TrEMBL
Match: A0A5A7TGX4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold529G00100 PE=4 SV=1)

HSP 1 Score: 1077.8 bits (2786), Expect = 0.0e+00
Identity = 565/722 (78.25%), Postives = 570/722 (78.95%), Query Frame = 0


Query: 1    MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVR 60
            MVLQTL DNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGW RPSTVSEVR
Sbjct: 831  MVLQTLWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWARPSTVSEVR 890

Query: 61   SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPD 120
            SFLGLAGYYR+FVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTV D
Sbjct: 891  SFLGLAGYYRQFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVRD 950

Query: 121  GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH 180
            GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH
Sbjct: 951  GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH 1010

Query: 181  YLY--------------------------------------------------------- 240
            YLY                                                         
Sbjct: 1011 YLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK 1070

Query: 241  -----ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEK 300
                 ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEK
Sbjct: 1071 VSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEK 1130

Query: 301  RGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDL 360
            RGLAEAGQ AEFSLSSDGGLLFER LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDL
Sbjct: 1131 RGLAEAGQAAEFSLSSDGGLLFERHLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDL 1190

Query: 361  KRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPR 420
            KRVYWW NMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPR
Sbjct: 1191 KRVYWWHNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPR 1250

Query: 421  TLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT 480
            TLRGFTVIWVVVDRLTK AHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVS+RDARFT
Sbjct: 1251 TLRGFTVIWVVVDRLTKLAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSNRDARFT 1310

Query: 481  SKFWKGLQTAMGTRLDFSTAFHPQTD---------------------------------- 540
            SKFWKGLQTAMGTRLDFSTAFHPQTD                                  
Sbjct: 1311 SKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF 1370

Query: 541  -------------------------------------------GDKVFLKVAPMKGVLRF 584
                                                       GDKVFLKVAPM+GVLRF
Sbjct: 1371 AYNNSYQATIGMAPFEALYGKCCRSPVCWGEVDVRRKDLEFEVGDKVFLKVAPMRGVLRF 1430

[Close]

BLAST of Pay0020280 vs. ExPASy TrEMBL
Match: A0A5A7U470 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G001560 PE=4 SV=1)

HSP 1 Score: 1076.6 bits (2783), Expect = 0.0e+00
Identity = 560/713 (78.54%), Postives = 570/713 (79.94%), Query Frame = 0


Query: 1    MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVR 60
            +VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVT WTRPSTVSEVR
Sbjct: 571  IVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTDWTRPSTVSEVR 630

Query: 61   SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPD 120
            SFLGLAGYYRRFVENFS IATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPD
Sbjct: 631  SFLGLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD 690

Query: 121  GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH 180
            GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH
Sbjct: 691  GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH 750

Query: 181  YLY------------------ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLR 240
            YLY                  ALITRQAPLHRDLERAEIAVSVGAVT+QLAQLTVQPTLR
Sbjct: 751  YLYGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLR 810

Query: 241  QRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHS 300
            QRIIDAQSNDPYLVEKRGLAEAGQ   FS+SSDGGL+FERRLCVPSDSAVKTELLSEAHS
Sbjct: 811  QRIIDAQSNDPYLVEKRGLAEAGQAVGFSISSDGGLVFERRLCVPSDSAVKTELLSEAHS 870

Query: 301  SPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPE 360
             PFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLS+PE
Sbjct: 871  FPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSMPE 930

Query: 361  WKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRL 420
            WKWENVSMDFITGLPRTLRGFTVIWVVVDR TKSAHFVPGKSTYT SKWAQLYMSEIVRL
Sbjct: 931  WKWENVSMDFITGLPRTLRGFTVIWVVVDRHTKSAHFVPGKSTYTTSKWAQLYMSEIVRL 990

Query: 421  HGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD------------------ 480
            HGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD                  
Sbjct: 991  HGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDVQTEHLNQVLEDMLRACA 1050

Query: 481  ------------------------------------------------------------ 540
                                                                        
Sbjct: 1051 LEFPGSWDSHLHLMEFAYKNSYQATIDMAPFEALYGKCCRSPVCWGEVGEQRLMGPELGQ 1110

Query: 541  -----------------------------------GDKVFLKVAPMKGVLRFERRGKLSP 583
                                               GDKVFLKVAPM+GVLRFERRGKLSP
Sbjct: 1111 STNEAIQKIRSRMHTAQSRQKCYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSP 1170

[Close]

BLAST of Pay0020280 vs. ExPASy TrEMBL
Match: A0A5A7UP94 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE=4 SV=1)

HSP 1 Score: 1074.3 bits (2777), Expect = 2.2e-310
Identity = 567/757 (74.90%), Postives = 574/757 (75.83%), Query Frame = 0


Query: 1    MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVR 60
            MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSEVR
Sbjct: 262  MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVR 321

Query: 61   SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPD 120
            SFLGLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPD
Sbjct: 322  SFLGLAGYYRRFVENFSRTATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD 381

Query: 121  GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH 180
            GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH
Sbjct: 382  GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH 441

Query: 181  YLY--------------------------------------------------------- 240
            YLY                                                         
Sbjct: 442  YLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK 501

Query: 241  -----ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEK 300
                 ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEK
Sbjct: 502  VSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEK 561

Query: 301  RGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDL 360
            RGLAEAGQ  EFSLSSDGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMHPGSTKMYQDL
Sbjct: 562  RGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLAEAHSSPFSMHPGSTKMYQDL 621

Query: 361  KRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPR 420
            KR+YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPR
Sbjct: 622  KRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFIAGLPR 681

Query: 421  TLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT 480
            TLRGFTVIWVVVDRLTKSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFT
Sbjct: 682  TLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWAQLYMSEIVRLHGVPVSIVSDRDARFT 741

Query: 481  SKFWKGLQTAMGTRLDFSTAFHPQTD---------------------------------- 540
            SKFWKGLQTAMGTRLDFSTAFHPQTD                                  
Sbjct: 742  SKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNKVLEDMLRACALEFPGSWDSHLHLMEF 801

Query: 541  ------------------------------------------------------------ 583
                                                                        
Sbjct: 802  AYNNSYQATIGMAPFEALYDKCCRSPICWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTA 861

[Close]

BLAST of Pay0020280 vs. ExPASy TrEMBL
Match: A0A5A7UAA8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00800 PE=4 SV=1)

HSP 1 Score: 1071.6 bits (2770), Expect = 1.1e-309
Identity = 570/757 (75.30%), Postives = 571/757 (75.43%), Query Frame = 0


Query: 1    MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVR 60
            MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK  VSVDPAKIEAVTGWTRPSTVSEVR
Sbjct: 734  MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSEVR 793

Query: 61   SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPD 120
            SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPD
Sbjct: 794  SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD 853

Query: 121  GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH 180
            GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH
Sbjct: 854  GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH 913

Query: 181  YLY--------------------------------------------------------- 240
            YLY                                                         
Sbjct: 914  YLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK 973

Query: 241  -----ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEK 300
                 ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEK
Sbjct: 974  VSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEK 1033

Query: 301  RGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDL 360
            RGLAEAGQ  EFSLSSDGGL FE RLCVPSDSAVKTELL EAHSSPFSMHPGSTKMYQDL
Sbjct: 1034 RGLAEAGQAVEFSLSSDGGLSFEGRLCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDL 1093

Query: 361  KRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPR 420
            KRVYWWRNMKREVAEFVSKCLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPR
Sbjct: 1094 KRVYWWRNMKREVAEFVSKCLVCQQVKEPRQKPAGLLQPLSIPEWKWENVSMDFITGLPR 1153

Query: 421  TLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT 480
            TLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT
Sbjct: 1154 TLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT 1213

Query: 481  SKFWKGLQTAMGTRLDFSTAFHPQTDG--------------------------------- 540
            SKFWKGLQTAMGTRLDFSTAFHPQ DG                                 
Sbjct: 1214 SKFWKGLQTAMGTRLDFSTAFHPQADGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF 1273

Query: 541  ------------------------------------------------------------ 583
                                                                        
Sbjct: 1274 AYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTA 1333

[Close]

BLAST of Pay0020280 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 1066.6 bits (2757), Expect = 3.6e-308
Identity = 563/755 (74.57%), Postives = 572/755 (75.76%), Query Frame = 0


Query: 1    MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVR 60
            MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSEVR
Sbjct: 744  MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVR 803

Query: 61   SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPD 120
            SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPD
Sbjct: 804  SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD 863

Query: 121  GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH 180
            GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH
Sbjct: 864  GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH 923

Query: 181  YLY--------------------------------------------------------- 240
            YLY                                                         
Sbjct: 924  YLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK 983

Query: 241  -----ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEK 300
                 ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEK
Sbjct: 984  VSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEK 1043

Query: 301  RGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDL 360
            RGLAEAGQ  EFSLSSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+
Sbjct: 1044 RGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDV 1103

Query: 361  KRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPR 420
            KRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPR
Sbjct: 1104 KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPR 1163

Query: 421  TLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT 480
            TLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT
Sbjct: 1164 TLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT 1223

Query: 481  SKFWKGLQTAMGTRLDFSTAFHPQTD---------------------------------- 540
            SKFWK LQTAMGTRLDFSTAFHPQTD                                  
Sbjct: 1224 SKFWKSLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEYMLRACALEFPGSWDSHLHLMEF 1283

Query: 541  ------------------------------------------------------------ 581
                                                                        
Sbjct: 1284 VYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTA 1343

[Close]

BLAST of Pay0020280 vs. NCBI nr
Match: KAA0040695.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1077.8 bits (2786), Expect = 0.0e+00
Identity = 565/722 (78.25%), Postives = 570/722 (78.95%), Query Frame = 0


Query: 1    MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVR 60
            MVLQTL DNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGW RPSTVSEVR
Sbjct: 831  MVLQTLWDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWARPSTVSEVR 890

Query: 61   SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPD 120
            SFLGLAGYYR+FVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTV D
Sbjct: 891  SFLGLAGYYRQFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVRD 950

Query: 121  GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH 180
            GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH
Sbjct: 951  GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH 1010

Query: 181  YLY--------------------------------------------------------- 240
            YLY                                                         
Sbjct: 1011 YLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK 1070

Query: 241  -----ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEK 300
                 ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEK
Sbjct: 1071 VSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEK 1130

Query: 301  RGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDL 360
            RGLAEAGQ AEFSLSSDGGLLFER LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDL
Sbjct: 1131 RGLAEAGQAAEFSLSSDGGLLFERHLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDL 1190

Query: 361  KRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPR 420
            KRVYWW NMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPR
Sbjct: 1191 KRVYWWHNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPR 1250

Query: 421  TLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT 480
            TLRGFTVIWVVVDRLTK AHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVS+RDARFT
Sbjct: 1251 TLRGFTVIWVVVDRLTKLAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSNRDARFT 1310

Query: 481  SKFWKGLQTAMGTRLDFSTAFHPQTD---------------------------------- 540
            SKFWKGLQTAMGTRLDFSTAFHPQTD                                  
Sbjct: 1311 SKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF 1370

Query: 541  -------------------------------------------GDKVFLKVAPMKGVLRF 584
                                                       GDKVFLKVAPM+GVLRF
Sbjct: 1371 AYNNSYQATIGMAPFEALYGKCCRSPVCWGEVDVRRKDLEFEVGDKVFLKVAPMRGVLRF 1430

[Close]

BLAST of Pay0020280 vs. NCBI nr
Match: KAA0050673.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1076.6 bits (2783), Expect = 0.0e+00
Identity = 560/713 (78.54%), Postives = 570/713 (79.94%), Query Frame = 0


Query: 1    MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVR 60
            +VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVT WTRPSTVSEVR
Sbjct: 571  IVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTDWTRPSTVSEVR 630

Query: 61   SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPD 120
            SFLGLAGYYRRFVENFS IATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPD
Sbjct: 631  SFLGLAGYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD 690

Query: 121  GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH 180
            GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH
Sbjct: 691  GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH 750

Query: 181  YLY------------------ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLR 240
            YLY                  ALITRQAPLHRDLERAEIAVSVGAVT+QLAQLTVQPTLR
Sbjct: 751  YLYGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTIQLAQLTVQPTLR 810

Query: 241  QRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHS 300
            QRIIDAQSNDPYLVEKRGLAEAGQ   FS+SSDGGL+FERRLCVPSDSAVKTELLSEAHS
Sbjct: 811  QRIIDAQSNDPYLVEKRGLAEAGQAVGFSISSDGGLVFERRLCVPSDSAVKTELLSEAHS 870

Query: 301  SPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPE 360
             PFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLS+PE
Sbjct: 871  FPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSMPE 930

Query: 361  WKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRL 420
            WKWENVSMDFITGLPRTLRGFTVIWVVVDR TKSAHFVPGKSTYT SKWAQLYMSEIVRL
Sbjct: 931  WKWENVSMDFITGLPRTLRGFTVIWVVVDRHTKSAHFVPGKSTYTTSKWAQLYMSEIVRL 990

Query: 421  HGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD------------------ 480
            HGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD                  
Sbjct: 991  HGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDVQTEHLNQVLEDMLRACA 1050

Query: 481  ------------------------------------------------------------ 540
                                                                        
Sbjct: 1051 LEFPGSWDSHLHLMEFAYKNSYQATIDMAPFEALYGKCCRSPVCWGEVGEQRLMGPELGQ 1110

Query: 541  -----------------------------------GDKVFLKVAPMKGVLRFERRGKLSP 583
                                               GDKVFLKVAPM+GVLRFERRGKLSP
Sbjct: 1111 STNEAIQKIRSRMHTAQSRQKCYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSP 1170

[Close]

BLAST of Pay0020280 vs. NCBI nr
Match: KAA0057672.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1074.3 bits (2777), Expect = 4.5e-310
Identity = 567/757 (74.90%), Postives = 574/757 (75.83%), Query Frame = 0


Query: 1    MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVR 60
            MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSEVR
Sbjct: 262  MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVR 321

Query: 61   SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPD 120
            SFLGLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPD
Sbjct: 322  SFLGLAGYYRRFVENFSRTATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD 381

Query: 121  GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH 180
            GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH
Sbjct: 382  GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH 441

Query: 181  YLY--------------------------------------------------------- 240
            YLY                                                         
Sbjct: 442  YLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK 501

Query: 241  -----ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEK 300
                 ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEK
Sbjct: 502  VSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEK 561

Query: 301  RGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDL 360
            RGLAEAGQ  EFSLSSDGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMHPGSTKMYQDL
Sbjct: 562  RGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLAEAHSSPFSMHPGSTKMYQDL 621

Query: 361  KRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPR 420
            KR+YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPR
Sbjct: 622  KRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFIAGLPR 681

Query: 421  TLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT 480
            TLRGFTVIWVVVDRLTKSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFT
Sbjct: 682  TLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWAQLYMSEIVRLHGVPVSIVSDRDARFT 741

Query: 481  SKFWKGLQTAMGTRLDFSTAFHPQTD---------------------------------- 540
            SKFWKGLQTAMGTRLDFSTAFHPQTD                                  
Sbjct: 742  SKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNKVLEDMLRACALEFPGSWDSHLHLMEF 801

Query: 541  ------------------------------------------------------------ 583
                                                                        
Sbjct: 802  AYNNSYQATIGMAPFEALYDKCCRSPICWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTA 861

[Close]

BLAST of Pay0020280 vs. NCBI nr
Match: KAA0051357.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1071.6 bits (2770), Expect = 2.2e-309
Identity = 570/757 (75.30%), Postives = 571/757 (75.43%), Query Frame = 0


Query: 1    MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVR 60
            MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK  VSVDPAKIEAVTGWTRPSTVSEVR
Sbjct: 734  MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSEVR 793

Query: 61   SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPD 120
            SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPD
Sbjct: 794  SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD 853

Query: 121  GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH 180
            GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH
Sbjct: 854  GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH 913

Query: 181  YLY--------------------------------------------------------- 240
            YLY                                                         
Sbjct: 914  YLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK 973

Query: 241  -----ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEK 300
                 ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEK
Sbjct: 974  VSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEK 1033

Query: 301  RGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDL 360
            RGLAEAGQ  EFSLSSDGGL FE RLCVPSDSAVKTELL EAHSSPFSMHPGSTKMYQDL
Sbjct: 1034 RGLAEAGQAVEFSLSSDGGLSFEGRLCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDL 1093

Query: 361  KRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPR 420
            KRVYWWRNMKREVAEFVSKCLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPR
Sbjct: 1094 KRVYWWRNMKREVAEFVSKCLVCQQVKEPRQKPAGLLQPLSIPEWKWENVSMDFITGLPR 1153

Query: 421  TLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT 480
            TLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT
Sbjct: 1154 TLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT 1213

Query: 481  SKFWKGLQTAMGTRLDFSTAFHPQTDG--------------------------------- 540
            SKFWKGLQTAMGTRLDFSTAFHPQ DG                                 
Sbjct: 1214 SKFWKGLQTAMGTRLDFSTAFHPQADGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEF 1273

Query: 541  ------------------------------------------------------------ 583
                                                                        
Sbjct: 1274 AYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTA 1333

[Close]

BLAST of Pay0020280 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1066.6 bits (2757), Expect = 7.5e-308
Identity = 563/755 (74.57%), Postives = 572/755 (75.76%), Query Frame = 0


Query: 1    MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVR 60
            MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSEVR
Sbjct: 744  MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVR 803

Query: 61   SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPD 120
            SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPD
Sbjct: 804  SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPD 863

Query: 121  GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH 180
            GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH
Sbjct: 864  GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRH 923

Query: 181  YLY--------------------------------------------------------- 240
            YLY                                                         
Sbjct: 924  YLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK 983

Query: 241  -----ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEK 300
                 ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEK
Sbjct: 984  VSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEK 1043

Query: 301  RGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDL 360
            RGLAEAGQ  EFSLSSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+
Sbjct: 1044 RGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDV 1103

Query: 361  KRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPR 420
            KRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPR
Sbjct: 1104 KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPR 1163

Query: 421  TLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT 480
            TLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT
Sbjct: 1164 TLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT 1223

Query: 481  SKFWKGLQTAMGTRLDFSTAFHPQTD---------------------------------- 540
            SKFWK LQTAMGTRLDFSTAFHPQTD                                  
Sbjct: 1224 SKFWKSLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEYMLRACALEFPGSWDSHLHLMEF 1283

Query: 541  ------------------------------------------------------------ 581
                                                                        
Sbjct: 1284 VYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTA 1343

[Close]

BLAST of Pay0020280 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 120.9 bits (302), Expect = 3.3e-27
Identity = 58/128 (45.31%), Postives = 82/128 (64.06%), Query Frame = 0


Query: 1   MVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKDGVSVDPAKIEAVTGWTRPSTVSE 60
           MVLQ    ++ YA   KC F   Q+++LG  H++S +GVS DPAK+EA+ GW  P   +E
Sbjct: 6   MVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKNTTE 65

Query: 61  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTV 120
           +R FLGL GYYRRFV+N+ +I  PLT+L +K +   W++    +F+ LK  + T PVL +
Sbjct: 66  LRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPVLAL 125

Query: 121 PDGSGSFV 127
           PD    FV
Sbjct: 126 PDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Pay0020280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	5.1e-57	27.16	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	5.1e-57	27.16	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	5.1e-57	27.16	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	5.1e-57	27.16	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	5.1e-57	27.16	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Pay0020280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TGX4	0.0e+00	78.25	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold52...	[more]
A0A5A7U470	0.0e+00	78.54	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G001560 P...	[more]
A0A5A7UP94	2.2e-310	74.90	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE...	[more]
A0A5A7UAA8	1.1e-309	75.30	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55...	[more]
A0A5A7U330	3.6e-308	74.57	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]

BLAST of Pay0020280 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0040695.1	0.0e+00	78.25	pol protein [Cucumis melo var. makuwa]	[more]
KAA0050673.1	0.0e+00	78.54	pol protein [Cucumis melo var. makuwa]	[more]
KAA0057672.1	4.5e-310	74.90	pol protein [Cucumis melo var. makuwa]	[more]
KAA0051357.1	2.2e-309	75.30	pol protein [Cucumis melo var. makuwa]	[more]
KAA0048687.1	7.5e-308	74.57	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Pay0020280 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	3.3e-27	45.31	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 95..183 e-value: 3.8E-30 score: 103.9
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 42..132 e-value: 5.6E-31 score: 108.4
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 1..39 e-value: 3.8E-9 score: 38.9
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 270..326 e-value: 2.5E-17 score: 62.7
None	No IPR available	GENE3D	1.10.340.70		coord: 235..325 e-value: 2.4E-18 score: 68.1
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 40..183
None	No IPR available	PANTHER	PTHR24559:SF355	PROTEIN, PUTATIVE-RELATED	coord: 40..183
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 335..446 e-value: 8.5E-24 score: 85.9
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 337..445 score: 11.088143
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..184
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 495..575
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 338..445

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0020280.1	Pay0020280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding