Pay0020064 (gene) Melon (Payzawat) v1

Overview


Name	Pay0020064
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Transcription elongation factor B polypeptide 3 isoform X2
Location	chr11: 23088743 .. 23100872 (+)
RNA-Seq Expression	Pay0020064
Synteny	Pay0020064

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTGTGATTGTTTAATCAGCGGCGCATTTTAGCCAGTTGGGGAAGAATATCGCAAAACTATGGAGGGTAATCAGATGAGTATTTTTCCAGGCCAATTCGTTCGTTTCTAGTTCAACGATCGTCCTCCTCCTTCAACGATTCTCGTCTTCCTCTTCTCAGACTGTCGGTAAGATCATCAACATCTCAATTTATTCATCTATCTCACTTCATCTGCAATTGAAATTGTTGAGCCGATTTCTTCCTTTTCTTTTTTCCCCATTTTCTTCTCAATTTTCCTTAATGTTTTGGATGATCGAATACGATATCTAAAATAATCATAATTTTATGAACCAGATCTGTTTATTCCTTTCGTTGGTCGTCTATTGAATGAATTTAGGATCGTTTGAATTGAAGTCGTTGAACTTGATTCTCATTCGAAATTTCTTAGCTAAGCAGAAAGATTTGGAATCATTGTTTTCTTTTTTTACACTTATTTTGCTCGCTTGATCGGCGGGTTATTTAGCTGTCTGTCTTGTATTCTGATTGGTTGCTTGAAGCATAGAGCTATTTAAGATGCTGTGTATATTCAGGCATTTCATTGTGAAGGGTATGGAATTTAGTTAACTCAGCGTCAATTTTTGGTGAAAGAAGTGCCTGAATGTGAGAGAGTTTGATTTTCCTTTTCTTTTCCTTGTAGTGAAGTTGGTTACCGGCTATTTTTACCGGTGTATTTATTGAATCAGTATTTTGTCTGCTTTTGTAAATTGATTTGTTTGTTTCTTTCTTGTTCTTAGCCTGACAACCTGAGAAAGAAGAGATGTACCGAGTACGAAAAATTCCTTCGTTGGTTGATCTTTGTGTTAACAAAGCTATAGATAATATAAGGTTCCTTGGGGATGTTGGCGAAACTGATATACATCTTTTAGAGCGTATTTTGCCACATTGCACAGTTGACCAATTAATGCATGTGGAGAAGAGTTCAGAAGTAAGATTGTATGAATTTGCTTATTGTATTTAACTATCTAGTTTTGCTTTAGTATGTATACTCAATTGAGTACGGACTTCTTACAGGGAAGAGATCTTACTCCAGTAACTGATAAATTGTGGAAAAAATTCTATGAAAGACAGTTTGGTAAAGAAAGTACCACTACTGTAATTGAGAGGATGCGGCAAAAAAGGGTCGCATTTAGATGGATTCAATTATATGAGGTAGCTTTCCTTTTACATCTCTTCTCATGCCATTTACTTTGAGATTTGAGTGTTGAATGATGGTTTGGTTAGCGAAGATAATTGATTCCTCTGAGAATTACCATTAAAACGAAGCTATCTATTTTCAGGCGAAGATGCAGGACATTGAAAAGAATGAGAGCAAAGCTGCAGATCGAATAAAACAAAGCTACCTAAAGGAAAATGCCCGTATGTTCTATATCATATTTGCAATCTCTCTAATGGATTCCTCATAATTTTAAATCTGAACTAACAATTAGCTAGATCATGCGATGCATGCTATCTGGAAATTGTTTTCCACTCCCAACTCATACTTAATAAGAGGTTTACAATAGATAGGAATTCATGGTCGTAGTTCAGAGTGCGGAAGGAAGATTTGTATTGAAGAAAGGAATGGCGAGAGGTCCAGAAAGTTGGAGTTAGAGTTGGGCACATCAGCTTGGGTAAGAGATTGCTTAGTGGCCGCTGCGGAGCTGAGCAATCCTTTGGTTTTTTGGCGGAGAAGATGGCTGGAGTTCGCGATCATTTTCTTTCAAGTGCTTGAAAAGTCTAATTGCTCTATCATCCGTTGAATCCTTTGATGGATGAAGAACGAGGGTTCTCATTCCTGATGGCAAGAATGGTAGTGGTAGGAGACCGTTGGCAGCGGAGGTTTCTGGGCTCCTTCCATTCTCAACAAAGATTATTTCGCCCTCAACTGCAGGAACACAGTTGACTTGGTTTGGGTGGGGAAGTCAACTCAATTTCTTCGGATTTGGTTTCAAAGGCGAGTTTAGAGGGTAGGGCAGGTTCCGAGGGGAGTTTGAAGTCAGGGAAGGAATTGGATGCGGTGGTCAAGGCTGATTGTTCAAAAGTGGAGTCGGAAGGTTCTCCAGAAGATAAGAAGTGGGAATTTGATTTGCGTTCTGATTGTGAAGCAACGGTGATTATCAAAATGACTAGTGCAGCAGTGGAATGAGAGGATTTAAAGAGGGTTTTTGAGCGAGCATGGTTTCTGAAATTTGGACTTAATTTTCTTTTTTTTCTTTTTTGTGCTAAGTTAGCTGTGGGCATCTGTGATTCGAAGGTGGAGGCGGAGGAATTAAGATTTCTTCTTCGAATCTTGGGATTTCTAGATGGTGAAGGAGGAAAGGAAACAAGTCTTTAAAGGTTGTTGGGTTACGGCGCATGATGTTCCCCCTTTTCTCATAATTAAGGAATTCATCGCCTCTTTGCCAGATTGGAGTGGAGGGTTGCTCGATGGAGAGGTGGAGCTTAGTAGTTTGAATTGGTTGGAGGAATTTAGTTTTAGGGCGAAAGATATAGCCTAAGAAGCACGGACATGGGTATGGATACGATAGGACAGGGCAATACGTCCGAACCTGTTGGGGATATGCTATATTTTAAAATTATTCTTTCTTATAATATATGTAAATTTAACATAAAATACTAAATGTTCTTCCATTTCTCAACAAAAATAAATAAATGAATAAATAAATAAATGTTCTTCACTAAAAAAAGCATAAAATGCCATTTGTCAATTTAATATTTAATCACTGTAGTGTATAGGAGTATAAAACATAATATGTATTATCAGCATTCAACCTATACATAACAATAGAAAATGGAAAGAGATTTTCCATACAAAAAAATAAAGTATTTAAGGCTAATAAAAACTATCCTCTCAAATCTCAATAACATCTTCATCCTTAATAATTTGAGTCTCCAACTTTGGATCATCTAAAGAAAAATTAGCTACTTCAAGCATGTCCACATCTTCAAGCGAATCAAAAGCATCTCCATCAATATTCCATGACTTGGTTTCTCCTTTTAAATATTCTAGAGTTCTTATAGACAAAAGACGAAGGTTATTATGAATAAATACCAAATCCTCTGCCCATTGAGACATTATTTTGTTTATTTTAAAGGAGTTAATAAAAGAATATATGCTCCAATTTCGTTCACAACATGAAGAGGATGATGGTTGTCAGTAATCTTTTGAAGCATTGGTGCATAAGTCCCATGAGTTGCCCATCAGCTTCTAGGATCTATAGTGTATCTCTTGGATATGGAATCATATTCATGAAAATCTCCAATTTTTGTAGAAAATTGAGCAAATTCTATGTTTACTTCTGCACGATCCTCAGGGCTACTAAAATATCTCTTCAAACACTTCATTCTCTATCTAGTTGTTTCGAGCAACTCAATTAGGATCTTCTGTAAGCCTCTTCCTTGTAGTGTCTATATATAAGTGCTTTAGAAAAAATGTTAAACTCGAAAAAATTCATTAATTATAAGTTTAGAATGTGCTAAACTAAAATTAATTAAATACCTTGGATTCAAAGAATGTGCTAAACAATGAAGTGGAGTACTACTCTTGTTCCAACAATTAATGAGAATGTTATACACCACCTCATATTAAGAAGAGAATTCACTTGGTCTCAACCCTCATGTTTATATACGTCATCTTCACCTTTTCAATTATGGTACCCCACATGTCATACACCAAATGCAAACAAGGTGTGTTTGTATCACAAGCTCTAATCATGTCCTGTATGGGTGTATGGGTGAAGTGAATGATTGAATATAATTGATTTTGTTCTACCAAATGTCATCGAGCATCAACCCCTTTACATGTCTTGCCTCACCACATCATCTTCTCCCTCATTGATGACCATAGTTTGTAAGCCGCCTTTAATAAGCTTAAACCTTTTAAGCGTAACGATAACAGATGCAAAATGCATTTCGGCTATTGAAAGCAATTTAAGAGGGACAAATTTATCAAATATGGCGAGGCTCATGGAATGGTTCATGATAAAAAAATTCACTACCATGATATCCCCAACAATATTAGAAATCCAACTGTACTCTCCATAAACAACTAGATTATTTTCAACATTCTTGGCAGCATAAATGTTTTTAAGGCAAGATTTAATGTATGAACAATGCATGGTGTCCATATAATTGTCAGAAATTGTGCTTCGAAAATATGTCCTACACCTTTGCAATTGGGAGCATTATCTGTTATCACATGAGCAACATTCTTATGACCGACTTCATTAATCACTTCCTTCATCAAATTTGCAATGGAGTATTTATCCTTAATCTCAGTGAAGCAGTCTAATGATTTTAGAAACATCGGTTTGCCATTAGAAATGGCCATCAAGTTAATCGACAACCTCCTTTGTGAGCCACTCCAAACTCACAATACTCACTCCCTATTTTTGCCATTCACCTTTAGTAGGTACCAATGGTATTTCAATATTAGCCTTTTCTCTTTGGAGTAGACTAATCCTCAATATATTATATCCCAGAGGCTTGTATCCTGGCAATGGGTTGTTTGCGGCATAAGTATAGACATCGATATAACGTGGGTTCCTCGCTAAATGAAACTGCAAATCCGTTGAATAAAACATTCGAGCAATAAGCGCATCCAACTGGTCTCATGATGTCTTATTGAATGATTTTTCAAGTGCACTTTGTTTTCGGTGGCAAAGGAACATTTTTTGGAGCTTTTGTTTTCATTTAAATTTTCGCCTTATCCTCTAGCATTTGCATATCTGCTATATCTTTAGGAGTGATCTTTAAACATGGCCTAATTCCTTGACCTGAGCAAATGAGCTCACTCCTGTATATGAGCTCTTCTTTATGACGTGACAAAAATTGCTTTGCCATGAAAATTTACACCCCGTCACTTAACTTCTTAATCTTAGTCGCATATTGCCATAGGGGTTTGGAATCATCTTCAATGGAATTAGTTTCCATGCAACTACTTCGTGTCATCCTAACATTTACAGAAGAGAAAAAAGGGAGTTCTGAAGTTCAATATTGATATGATATGTAAACAGAGTGGCCATTGGGCAATAACTTAAAAAGACAATTTTTGAAGTTGGTGCAGCAGGCAATAGATAAATCATAAAAGATGAAACTTCTGAAGAAAAAAAATAAGGCTTTTGAAGTTTGAAGTTGGATGGGCAAAAGACAGTTGACACCGGACAATATCTAAAAAAGATTAGAACTTTTGAAGAAAACAAATTAAAACTAGTAGAAAATAGCTAAAAGACGTACTTGATATCTACTTGATGTATCGTCGGTGGCAAGCAAGCAGTTGATAACAACAGCAAAGTCTGTCTGTTCCAATGAGAAAATATGATCGAGAACTGGAAGTTTGGGAATTTGGGTGTTTGCGTCGGAGTTGAACGGAATGGAGATGGTTGAAGTGCACAACAAGGAGGAGAGGTAAAATGATTTTAACTTTATATGAATTATTTATATTTTTTTAAAACGGTTGATGAAAGGATTCTTTCCTGTATGAAGGGTGTTTAGGAGTGTTGAAAAGGGGGTGGGGAGATTTGGTTGGCTATTCCGTATCATGTTTCTTTTTGGGCTTTGAAATAATTTTCCTCTTGACATGATTTTGTATAGCTGGGGCCCTTTCCTCTAATGGTCCCCTGGTTTTTTGTGGGCTTGGTGTTTTGCACGCCCTTGTATTATTTCATTTTTTTCGATGAAAGCCGTCTATTTCAATAAAAGAAATGGTCTTGACACCTTGTTTTGAGGTAGATCCCCGGTAACAAATTGTGGAAGTTAAAGACATCATTATACGTCTAAAACAGTCTACTAGAGCCTGGTTTGAATGCTTTGCAAAAGCAGACAGGAGCTATGGATTCAGTCAAAGCCAAGTTGATCTACGATGTTCTATAAATGTATAGGAAATGACAAGGTTTTGGTTTTGTAGTTTTTGTTGATGATATCATTCTTACAGGTAATGGTGAGGCAAGACTGACTTTCGTGAAGAAAAAGTTGCTGATGATTTCCAAATCAAAGACCTACGGACGTTAAAGTACTTCCTAGTCATGGAGTTTGCAAGGTCCAAAAGTGGCATTCTTGTCAACCAAAGGAAGTATATTCTTGATCTGCTACGTGTTTACTTCGTTGCAAGGTAGCAGAAATTACCATTAAGCAAAATATGAAAGTAGAAGCTGCAACAAAAATGAGATAAAGGAAAGAGAAATACAGAGACTTGTGGGAGACTCATATTTCTTTCTCACAAACATCTTGACATCGCTTTTGCAGTTAGTATGGAAAATCAGTTCATGCATTCTTCTAGACTAGCTCACTTTGATGTAGTTTCTAGAATCCTAAGATATTTGAAAGGTACTCCAGGAAAAGGCATATTGTTTAAAAGGCATGATTATCTCAATGTTGAAGTTTAAATTGATGTTGATTGGACAGGTAGCACGACTGATAAAAGATCCACTAGGTTATGACTCCTTTGTTGGAGGAAATCTTCTTACTTGGCGAAGTAAAAAACAAAGTGTGGTTGCAAGTAGTAGTGCAGAAGAAAAATTCATTGCTTTAGCCTATGGTATCTGCGAGGGTATATGGATGAGAAGATTGTTGGAAGAATTGAAATTTGCTTAGACGATGCACAAGCGCATTTACTGTGATAACAAGGCAGCAATTTCCATAGCTTGATTCAAACCTTAAAGTACTTCCTAGGCATGGAGTTTGCAAGGTCCAAAAGTGGCATTCTTGTCAACCAAAGAAAGTATATTCTTGATCTACTACGTGTTTACTTCATTGCAATGTAGCAGAAATTGCTAGAGCAAAATATGAACGGGAAGCTGCAACAAAAATAAGATAAAGGAAAGAGAAATACCAAAGACTTGTGGGAGACTCATATATCTTTCTCACACACATCCTGACATCGCTTTTGCAATTAGTATGGAAAATCAGTTCATGCATTCTTCTAGGCTAGCTCACTTTGATGTAGTTTATAGAATCCTAAAATATTTGAAAGGTACTCTAGGAAAAGGCATATTGTTTAAAAGGCATGATTATCTCAATGTTAAATTTTACATTGATGTTGATTGGACATGTAGCATGACTGATAAAAGATCCACTTCTGGGTATGACTCCTTTGTTGGAAATCTTCTTACTTGGCGAAGTGAAAAACAAAGTGTGGTTGCAAGTAGTAGTGCAGAAGCAAAATTTAGAGAGCCCATGGTATCTGTGAGGGTATATGGATAAGAAGATTGTTGGAAGAATTAAGATTCGCTTAGACGATGCACGAGCGCATTTATGTGATAACAAGGCAGCAATTTCCATTGCTTGATCCAGTCCTTCACGACAGGATGAAACATGTTGAAGTTGATAAGCACTTTATAGAGGTAAAGGTCGAGGTGGGAGTAATATGCATACCTTACCTTCGGACAATAGAACTAATTGTTGATGTGTTGATTAAAGGCCTTCCAAAGTGAAAATTCAATAAATTGATTGTCAAACTGGCAATGATTGATATCTTCAAACCAGCTTAAGGGGGAGTGTTGATTATTTCCTTTTTGTATTATATTTTACTGTATTGGTTGTATTATATTTGAAAAATCTACTTTTTCCTTATTTGTAATGGGTTGTTCTTAATTTAAGAAAATCCTCCTCTCTTTGTGAAATACACAAAAAATTACGTTCTTTCGCAAAAAATTAAGCACTCAACCTTATCTAAGGCACCAAGAGCTTTTCTAGTGGGTAGGTAGATCTTAGAACAGGCTCTAATGGCCAACGAAGCCAATGAGGATGCTCGGATGAAAAAGGAGGGAGTTGTGATTAACTTGACCTTTGATTGGAATTTTGTGGACAAAGTGATGTAGAAAAAGGGCTTTGGCTTTAGATGGAGGATGTGAATAAGGGATTGCATTAGGAATGTGCAATACTCCATCCTTATCAATGGAACACCAAGAGGGTTGATTCAAGCTTCTAGAGGTTTAAGGCAAAGGGATTCTTTATCTCCTATCTTGTTCTTGCTTGTTGTTGATGTTCTAAGTCGGCTTATCTTGAAGGGTGTGACCAAAAAATCATCGAGTTGTTTAGGGTAGGCTCAAATGAGGTGGCCTTATTGCATCTCCAGTTTGCTGATGACACGTTATTTTATTCGGGCAAAGAGGACTCTTTCTTGATCCTTCATCACATGGTGGAATTTTTTGAAGCCATGTCTGGTCTTAAAATCAATAGAAGCAAGTGTTAAACTATTGGGATCAACAGCAACCAAGAGAAGATTGAGAGATGGGCGGAGATGTTTGGCTGTGAAGTTGGATCCTTTCCCTCTGTTTACCTTGGGCTCCCCCGGGAGGCAATCCAAGAGCTACGACGTTTTGGAATCCCATCTTTAGGAAGATCTGTAAAAGGCTTGCCTCGTGGTAAAAAAGTTTATATTCCCAAACAAGGAGGTTAACTCTAATTAGATCGGTGCTCAATGGTATCCCTGTGTATTATTTTTCGTTCTTTCGGGCCCTGATTCAATTCGTAAAAGCTTGGGAAATTTTTCTAAGGCAAGGAGTGGATGAGGGAAGGGGCTCTCACTTGGTTAGTTGAGAGGCGGTTGGGAGGTTTGTGCGTAAGGGTGGGATGGAGATTGGTAGCCTAATTCTAAGTGGCTTTGGTGCTTTGCCTTTGAACGTAAAGTTTTGTGGTGTAGGATTATTGAGAGCAAGCATGATAACCATCCTTTTGAATTGGTGGCGAAAGGGGTTAAAGGCGCACACCGGAACCTGTGGAAAGATATTTCTTTTTAGCCTCCTACTTTCTCTCATTTTGTTAAGTGTATAGTGAGGAATGGTAAGGATGCATCTTTTTGGGAGGATTAGTGGCGAGGGGATAGAGCTCCCTCTTCTGTCTTTTCGCATCTCTATCACCTTTCTTCGTTGAAACATTGTTCGATCTCGGATTTCTTGATTTGGTCCAAGAACTGTCTTTTTCCTTTGGATTTCGTCTTCACTTGTCCAATAAGGAAATGACAGAGGTTGGGGAGTCCGTGTCTTTGGAGGATTAAGATCCCTAAGAAAGTCAGGTTTTTTATTTGGCAAGTTTTGCTTGATCGTGTGAACACTTTTGATAGGTTAATAAGGAGAACTTTGCTTGTGGGGTCTCTTTGTTGTATCCTTTGTCGGAAGGCAGAAGAAGACCTAGATCATCTCTTTGGGGTTGCCGATGTGTGAGATCGGTGTGGAATTGTTTCTTGTAGGAGTTTGACTTTAGCTTCGCTGGGCAGAGAGATGTTTGTAGGAATTCCTCCTCCATCCGCCTTTCAAAGACAAAGGCCGCTTCGTCTGGGGTATGTTTGGTGGTTTGAGATATTTAGGGAGAAGGGAATGATAGGGTGTTTAGAGGAGGGGAAAGGACCCCTAGGGGGTTTGGTTATTGATGAGATTCCACGTGTCTCTTTGGGCTTGACCCTCTTCCTTTAGTTGGGGGGAGGGAGGGTGTTTCGTTTATATTCTTTCATTTTTTCTCAATGGAAGCAATTTGAATAAAAAAATAATAATAATAAAAAAGAGATTTAGTGTTGGTTCATCTCTGGATAGATATTGTTGATTTTTACATATATTTTAGGAATCATTAGTGTTTCTGTAAGTAGATATTTTCTTAACATATGAAATTTTAAAGATTACCATGAACATTTTAGGAAAACAAAGTCGTCAAATACAGATTTGCAGCAAGGTTCCCCCTTCGAGCAATAAGAGAAGCTTTGGAGGTAAACTTTATTTGGTGGATTCTAACTCTGGCAAGGCTGCAGCTGACACCCTGCAAGAAAAAAAAAAACATTTACATGTTATTTTTCTCTTGATTTTCTGTAGGAAGTGGATATGGTTACAATGTGGCAAACACTAAGAACAAGATACTGAAGAAGGCAAAGATAGAAGTCCTTCAGAGGTAAAACTATTGAATTGGCACCGAGTGTAAATAAAATAAGGTCGTACAATCTATAGCATGTTGCTTGTTTAGAGTAACTGCCTAAAATCGAATATGCCCTAAAATTTGATCCATCTTGGCTTAGGATCTGATAAATCGGCATATCATATAGTTTTGAGGTTTTTCATCTATTTTTAAAGTCTCCATACCAAAATAACTTTTGAGCGGTAGCTTACTGCAAGCTTTATACGGGAGAACGGTTGCTATAAGAATGTCATTGTGGATCCTTGATCAGCTGAACCTAATCTCACTAAACCTCTAGAATCAATAGCTCTCATTTATAAACTTTGCACCCCTCCACCCTTGAAGCAAAGCCGCATTTCACAATGTTCAATGAAAAGTTATCCAATCACAATACCTTTCTATCTTTGGACAGTCAAGAGATGAAAAATATAAAAGCATGGCGAAGAAATGCAGTGCAGAAGAGTTCTGAGTAAGTTCCAATTGTTTGCACCATCATTCTCAATGCTTTCGGAACCTCCTGTTTTCACACTTGACAATGACGTTCACTTTGCCTCTTTGATTTTGCAGTATACCTTCGACAAAGAAGCCAATGTTTCCTGGAAGGGAATCCGCTTCAACTTCTAAAAATACTTCCACTCATATGGCCAAAAGATGGTAGCACTTCTATTTACTTTTTTCTTTTACCAAACGCAAAGTTCTGTTCTCTCACTCAGCTCCAATGTTGTATCTTCAATTTAGTTATCTCATGGTTCGAAAATTGCTCCTTTACCCTCTGACACTTCTGAAAAGCCATGTCCTGTGTATAATTTTATAATTCGTAGTTTCTTTCTCTTATAATGCAATGTTGTTTATTTTACACAAATTTTATCCTTCAAGTATGCGGAATTGTTTGTTAATGTGTGATAACATCAATCTAAATTAGCAAGTTATCAGATATACTCTGACCTGTGTTATTTTAGTGATGGGATGATCCGACTTTGCTCTTTGTTGGTTGTGGTCGTCTTTTGGATTTCATTGGTAGTATTGTACTCGCCTTTGTTTTTCTGCAACTGAAGATAGATTGTCGATTGTGTTGTTTGCAAGTTTATCTTTTTTGTTTTGTTGTATTTGTTATTTATTTCATTTTTTTCCCTCTTCTTGTGAGAGTTTGCATTGTAATCTTTTTCGTTACATCAATGAGAAGTTTTTTTTTCCTCCCTTCCCCTTTCCTTCCCATTTAACGTAAAAGTTGTATTCTGTTAATGTTATATTGTTGATATATTAACACAATTTAAACGCTGAGTATAAATCAAGCTAAAATGTTGAAACTTTTGATGGTTAATAATCTGAGAGGTTGGGCTTCGTTTTGAGGATGTTTGAACAATTTTATTTCGGTCATGAATTGTTATGCTTCAATTGCATTGACTTTCTTCTTTTTCTATTTTACGTAATTTAGGTTCATTTGTGATTTTTTTAGTAAATATTAGAGGTGAGTGATTTGAATTTAGAATATCACCATCTTCCGTATATATAGATGTCACTTAAGCTTAGATTTTGTTGACTATGTTTGTTTATTATTTCGATTAATTTTTTAGTCACCAAGGGAATGAGCAATCTATTTTAAGCAACCAAAATCAATTTAGTCTTTAAGATTTTAAAGGAATTGTCACGTTTGTTCTAACAATTTAGAGTACAGAAAATTGGCTTAGATTAGATATTGGAAGATACGGCTGGCCCAGTCTTTGAATGTGGAATACTTGGAGTTAGAAGAAAATGTGTTAAGAAGAAAATTGATTCTTAAACTGTTTATTATCAATTAACGTTGTTGTTTATTTGATCCGACCCTACTTAATAGTTCTCACTTTGCGCCTCCCCGACTTGGCCAGCAACTTGCTTTCTTCCGATGCATTATTTTACTAGCAAGACTCCGGTAAGGTATGATGCCGGTGTGGATAGCTGATCTTCCCTAACCCGCTACTGGAAGACGAGCATAGTTGGTTAGGCGCCTTGTCCACGACCTTTCTCATCTTTGTTATTCATTCAACTCTTTCTGCGGACAAGGGAGAATCTTTCTTATGCAGTGTAATCAACTTGAGTTAGTGAAAAGGCTTGATATTTGGCTCATAGCTCATTCCGAACGAGACCGATGAAACCTGCAGTTTGAAACAGAATGCATGGGAAAGTAGAAACCTTCTCATACTTCATTGTTGTATAAGAAAGGTTCAGCAACCATTTTTTTGTCCTTTTTTTTT

mRNA sequence

ATTTTGTGATTGTTTAATCAGCGGCGCATTTTAGCCAGTTGGGGAAGAATATCGCAAAACTATGGAGGGTAATCAGATGAGTATTTTTCCAGGCCAATTCGTTCGTTTCTAGTTCAACGATCGTCCTCCTCCTTCAACGATTCTCGTCTTCCTCTTCTCAGACTGTCGCCTGACAACCTGAGAAAGAAGAGATGTACCGAGTACGAAAAATTCCTTCGTTGGTTGATCTTTGTGTTAACAAAGCTATAGATAATATAAGGTTCCTTGGGGATGTTGGCGAAACTGATATACATCTTTTAGAGCGTATTTTGCCACATTGCACAGTTGACCAATTAATGCATGTGGAGAAGAGTTCAGAAGGAAGAGATCTTACTCCAGTAACTGATAAATTGTGGAAAAAATTCTATGAAAGACAGTTTGGTAAAGAAAGTACCACTACTGTAATTGAGAGGATGCGGCAAAAAAGGGTCGCATTTAGATGGATTCAATTATATGAGGCGAAGATGCAGGACATTGAAAAGAATGAGAGCAAAGCTGCAGATCGAATAAAACAAAGCTACCTAAAGGAAAATGCCCGAAAACAAAGTCGTCAAATACAGATTTGCAGCAAGGTTCCCCCTTCGAGCAATAAGAGAAGCTTTGGAGGAAGTGGATATGGTTACAATGTGGCAAACACTAAGAACAAGATACTGAAGAAGGCAAAGATAGAAGTCCTTCAGAGTCAAGAGATGAAAAATATAAAAGCATGGCGAAGAAATGCAGTGCAGAAGAGTTCTGATATACCTTCGACAAAGAAGCCAATGTTTCCTGGAAGGGAATCCGCTTCAACTTCTAAAAATACTTCCACTCATATGGCCAAAAGATGGTAGCACTTCTATTTACTTTTTTCTTTTACCAAACGCAAAGTTCTGTTCTCTCACTCAGCTCCAATGTTGTATCTTCAATTTAGTTATCTCATGGTTCGAAAATTGCTCCTTTACCCTCTGACACTTCTGAAAAGCCATGTCCTGTGTATAATTTTATAATTCGTAGTTTCTTTCTCTTATAATGCAATGTTGTTTATTTTACACAAATTTTATCCTTCAAGTATGCGGAATTGTTTGTTAATGTGTGATAACATCAATCTAAATTAGCAAGTTATCAGATATACTCTGACCTGTGTTATTTTAGTGATGGGATGATCCGACTTTGCTCTTTGTTGGTTGTGGTCGTCTTTTGGATTTCATTGGTAGTATTGTACTCGCCTTTGTTTTTCTGCAACTGAAGATAGATTGTCGATTGTGTTGTTTGCAAGTTTATCTTTTTTGTTTTGTTGTATTTGTTATTTATTTCATTTTTTTCCCTCTTCTTGTGAGAGTTTGCATTGTAATCTTTTTCGTTACATCAATGAGAAGTTTTTTTTTCCTCCCTTCCCCTTTCCTTCCCATTTAACGTAAAAGTTGTATTCTGTTAATGTTATATTGTTGATATATTAACACAATTTAAACGCTGAGTATAAATCAAGCTAAAATGTTGAAACTTTTGATGGTTAATAATCTGAGAGGTTGGGCTTCGTTTTGAGGATGTTTGAACAATTTTATTTCGGTCATGAATTGTTATGCTTCAATTGCATTGACTTTCTTCTTTTTCTATTTTACGTAATTTAGGTTCATTTGTGATTTTTTTAGTAAATATTAGAGGTGAGTGATTTGAATTTAGAATATCACCATCTTCCGTATATATAGATGTCACTTAAGCTTAGATTTTGTTGACTATGTTTGTTTATTATTTCGATTAATTTTTTAGTCACCAAGGGAATGAGCAATCTATTTTAAGCAACCAAAATCAATTTAGTCTTTAAGATTTTAAAGGAATTGTCACGTTTGTTCTAACAATTTAGAGTACAGAAAATTGGCTTAGATTAGATATTGGAAGATACGGCTGGCCCAGTCTTTGAATGTGGAATACTTGGAGTTAGAAGAAAATGTGTTAAGAAGAAAATTGATTCTTAAACTGTTTATTATCAATTAACGTTGTTGTTTATTTGATCCGACCCTACTTAATAGTTCTCACTTTGCGCCTCCCCGACTTGGCCAGCAACTTGCTTTCTTCCGATGCATTATTTTACTAGCAAGACTCCGGTAAGGTATGATGCCGGTGTGGATAGCTGATCTTCCCTAACCCGCTACTGGAAGACGAGCATAGTTGGTTAGGCGCCTTGTCCACGACCTTTCTCATCTTTGTTATTCATTCAACTCTTTCTGCGGACAAGGGAGAATCTTTCTTATGCAGTGTAATCAACTTGAGTTAGTGAAAAGGCTTGATATTTGGCTCATAGCTCATTCCGAACGAGACCGATGAAACCTGCAGTTTGAAACAGAATGCATGGGAAAGTAGAAACCTTCTCATACTTCATTGTTGTATAAGAAAGGTTCAGCAACCATTTTTTTGTCCTTTTTTTTT

Coding sequence (CDS)

ATGTACCGAGTACGAAAAATTCCTTCGTTGGTTGATCTTTGTGTTAACAAAGCTATAGATAATATAAGGTTCCTTGGGGATGTTGGCGAAACTGATATACATCTTTTAGAGCGTATTTTGCCACATTGCACAGTTGACCAATTAATGCATGTGGAGAAGAGTTCAGAAGGAAGAGATCTTACTCCAGTAACTGATAAATTGTGGAAAAAATTCTATGAAAGACAGTTTGGTAAAGAAAGTACCACTACTGTAATTGAGAGGATGCGGCAAAAAAGGGTCGCATTTAGATGGATTCAATTATATGAGGCGAAGATGCAGGACATTGAAAAGAATGAGAGCAAAGCTGCAGATCGAATAAAACAAAGCTACCTAAAGGAAAATGCCCGAAAACAAAGTCGTCAAATACAGATTTGCAGCAAGGTTCCCCCTTCGAGCAATAAGAGAAGCTTTGGAGGAAGTGGATATGGTTACAATGTGGCAAACACTAAGAACAAGATACTGAAGAAGGCAAAGATAGAAGTCCTTCAGAGTCAAGAGATGAAAAATATAAAAGCATGGCGAAGAAATGCAGTGCAGAAGAGTTCTGATATACCTTCGACAAAGAAGCCAATGTTTCCTGGAAGGGAATCCGCTTCAACTTCTAAAAATACTTCCACTCATATGGCCAAAAGATGGTAG

Protein sequence

MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMQDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPSTKKPMFPGRESASTSKNTSTHMAKRW

Homology

[Close]

BLAST of Pay0020064 vs. ExPASy TrEMBL
Match: A0A5D3BGR1 (Transcription elongation factor B polypeptide 3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold203G00180 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 1.0e-120
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 1   MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDL 60
           MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDL
Sbjct: 1   MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDL 60

Query: 61  TPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMQDIEKNESKAADRIK 120
           TPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMQDIEKNESKAADRIK
Sbjct: 61  TPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMQDIEKNESKAADRIK 120

Query: 121 QSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEM 180
           QSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEM
Sbjct: 121 QSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEM 180

Query: 181 KNIKAWRRNAVQKSSDIPSTKKPMFPGRESASTSKNTSTHMAKRW 226
           KNIKAWRRNAVQKSSDIPSTKKPMFPGRESASTSKNTSTHMAKRW
Sbjct: 181 KNIKAWRRNAVQKSSDIPSTKKPMFPGRESASTSKNTSTHMAKRW 225

[Close]

BLAST of Pay0020064 vs. ExPASy TrEMBL
Match: A0A1S4E1U0 (transcription elongation factor B polypeptide 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496337 PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 1.9e-119
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDL 60
           MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDL
Sbjct: 1   MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDL 60

Query: 61  TPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMQDIEKNESKAADRIK 120
           TPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMQDIEKNESKAADRIK
Sbjct: 61  TPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMQDIEKNESKAADRIK 120

Query: 121 QSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEM 180
           QSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEM
Sbjct: 121 QSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEM 180

Query: 181 KNIKAWRRNAVQKSSDIPSTKKPMFPGRESASTSKNTSTHMAKR 225
           KNIKAWRRNAVQKSSDIPSTKKPMFPGRESASTSKNTSTHMAKR
Sbjct: 181 KNIKAWRRNAVQKSSDIPSTKKPMFPGRESASTSKNTSTHMAKR 224

[Close]

BLAST of Pay0020064 vs. ExPASy TrEMBL
Match: A0A1S3C4D6 (transcription elongation factor B polypeptide 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496337 PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 1.9e-119
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDL 60
           MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDL
Sbjct: 1   MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDL 60

Query: 61  TPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMQDIEKNESKAADRIK 120
           TPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMQDIEKNESKAADRIK
Sbjct: 61  TPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMQDIEKNESKAADRIK 120

Query: 121 QSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEM 180
           QSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEM
Sbjct: 121 QSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEM 180

Query: 181 KNIKAWRRNAVQKSSDIPSTKKPMFPGRESASTSKNTSTHMAKR 225
           KNIKAWRRNAVQKSSDIPSTKKPMFPGRESASTSKNTSTHMAKR
Sbjct: 181 KNIKAWRRNAVQKSSDIPSTKKPMFPGRESASTSKNTSTHMAKR 224

[Close]

BLAST of Pay0020064 vs. ExPASy TrEMBL
Match: A0A6J1I1I3 (transcription elongation factor B polypeptide 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469662 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.4e-106
Identity = 196/225 (87.11%), Postives = 215/225 (95.56%), Query Frame = 0


Query: 1   MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDL 60
           MY VRK+PSLVDLCV KAIDN+RFLGDVGETD+HLLERILPHCTVDQLMHVEKSSEGRDL
Sbjct: 1   MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDL 60

Query: 61  TPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMQDIEKNESKAADRIK 120
           TPVTDKLWKKFYERQFG+EST  V ERM++K+VAFRWIQLYEAKM+DIEKNES+AADRIK
Sbjct: 61  TPVTDKLWKKFYERQFGRESTNIVSERMQKKKVAFRWIQLYEAKMKDIEKNESEAADRIK 120

Query: 121 QSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEM 180
           QSYLKENARKQSRQIQICSKVPP+SNKRSFG +GYG NV NTKNK+LKK+KIEVLQSQEM
Sbjct: 121 QSYLKENARKQSRQIQICSKVPPASNKRSFGAAGYGSNVTNTKNKLLKKSKIEVLQSQEM 180

Query: 181 KNIKAWRRNAVQKSSDIPSTKKPMFPGRESASTSKNTSTHMAKRW 226
           KNIKAWRRNAVQK+ DIPSTKKPMF GR+SASTSK+T+THMA++W
Sbjct: 181 KNIKAWRRNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW 225

[Close]

BLAST of Pay0020064 vs. ExPASy TrEMBL
Match: A0A6J1G8W9 (transcription elongation factor B polypeptide 3 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451808 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 3.1e-106
Identity = 195/225 (86.67%), Postives = 215/225 (95.56%), Query Frame = 0


Query: 1   MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDL 60
           MY VRK+PSLVDLCV KAIDN+RFLGDVGETD+HLLERILPHCTVDQLMHVEKSSEGRDL
Sbjct: 1   MYPVRKVPSLVDLCVYKAIDNLRFLGDVGETDLHLLERILPHCTVDQLMHVEKSSEGRDL 60

Query: 61  TPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMQDIEKNESKAADRIK 120
           TPVTDKLWKKFYERQFG+E+T  V ERM++K+VAFRWIQLYEAKM+DIEKNES+AADRIK
Sbjct: 61  TPVTDKLWKKFYERQFGRENTNIVSERMQKKKVAFRWIQLYEAKMKDIEKNESEAADRIK 120

Query: 121 QSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEM 180
           QSYLKENARKQSRQIQICSKVPP+SNKRSFG +GYG NV NTKNK+LKK+KIEVLQSQEM
Sbjct: 121 QSYLKENARKQSRQIQICSKVPPASNKRSFGAAGYGSNVTNTKNKLLKKSKIEVLQSQEM 180

Query: 181 KNIKAWRRNAVQKSSDIPSTKKPMFPGRESASTSKNTSTHMAKRW 226
           KNIKAWRRNAVQK+ DIPSTKKPMF GR+SASTSK+T+THMA++W
Sbjct: 181 KNIKAWRRNAVQKTCDIPSTKKPMFSGRDSASTSKSTTTHMARKW 225

[Close]

BLAST of Pay0020064 vs. NCBI nr
Match: TYJ98274.1 (transcription elongation factor B polypeptide 3 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 442.6 bits (1137), Expect = 2.1e-120
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 1   MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDL 60
           MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDL
Sbjct: 1   MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDL 60

Query: 61  TPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMQDIEKNESKAADRIK 120
           TPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMQDIEKNESKAADRIK
Sbjct: 61  TPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMQDIEKNESKAADRIK 120

Query: 121 QSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEM 180
           QSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEM
Sbjct: 121 QSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEM 180

Query: 181 KNIKAWRRNAVQKSSDIPSTKKPMFPGRESASTSKNTSTHMAKRW 226
           KNIKAWRRNAVQKSSDIPSTKKPMFPGRESASTSKNTSTHMAKRW
Sbjct: 181 KNIKAWRRNAVQKSSDIPSTKKPMFPGRESASTSKNTSTHMAKRW 225

[Close]

BLAST of Pay0020064 vs. NCBI nr
Match: XP_016901950.1 (PREDICTED: transcription elongation factor B polypeptide 3 isoform X2 [Cucumis melo])

HSP 1 Score: 438.3 bits (1126), Expect = 3.9e-119
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDL 60
           MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDL
Sbjct: 1   MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDL 60

Query: 61  TPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMQDIEKNESKAADRIK 120
           TPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMQDIEKNESKAADRIK
Sbjct: 61  TPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMQDIEKNESKAADRIK 120

Query: 121 QSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEM 180
           QSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEM
Sbjct: 121 QSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEM 180

Query: 181 KNIKAWRRNAVQKSSDIPSTKKPMFPGRESASTSKNTSTHMAKR 225
           KNIKAWRRNAVQKSSDIPSTKKPMFPGRESASTSKNTSTHMAKR
Sbjct: 181 KNIKAWRRNAVQKSSDIPSTKKPMFPGRESASTSKNTSTHMAKR 224

[Close]

BLAST of Pay0020064 vs. NCBI nr
Match: XP_008456387.2 (PREDICTED: transcription elongation factor B polypeptide 3 isoform X1 [Cucumis melo])

HSP 1 Score: 438.3 bits (1126), Expect = 3.9e-119
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDL 60
           MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDL
Sbjct: 1   MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDL 60

Query: 61  TPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMQDIEKNESKAADRIK 120
           TPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMQDIEKNESKAADRIK
Sbjct: 61  TPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMQDIEKNESKAADRIK 120

Query: 121 QSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEM 180
           QSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEM
Sbjct: 121 QSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEM 180

Query: 181 KNIKAWRRNAVQKSSDIPSTKKPMFPGRESASTSKNTSTHMAKR 225
           KNIKAWRRNAVQKSSDIPSTKKPMFPGRESASTSKNTSTHMAKR
Sbjct: 181 KNIKAWRRNAVQKSSDIPSTKKPMFPGRESASTSKNTSTHMAKR 224

[Close]

BLAST of Pay0020064 vs. NCBI nr
Match: XP_004143189.1 (transcription elongation factor B polypeptide 3 isoform X1 [Cucumis sativus] >KAE8646931.1 hypothetical protein Csa_021040 [Cucumis sativus])

HSP 1 Score: 433.3 bits (1113), Expect = 1.2e-117
Identity = 220/225 (97.78%), Postives = 223/225 (99.11%), Query Frame = 0


Query: 1   MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDL 60
           MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLL+RILPHCTVDQLMHVEKSSEGRDL
Sbjct: 1   MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDL 60

Query: 61  TPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMQDIEKNESKAADRIK 120
           TPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKM+DIEKNESKAADRIK
Sbjct: 61  TPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMEDIEKNESKAADRIK 120

Query: 121 QSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEM 180
           QSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEM
Sbjct: 121 QSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEM 180

Query: 181 KNIKAWRRNAVQKSSDIPSTKKPMFPGRESASTSKNTSTHMAKRW 226
           KNIKAWRRNAVQKSSDI STKKPMF GRESASTSKNTSTHMAKRW
Sbjct: 181 KNIKAWRRNAVQKSSDISSTKKPMFSGRESASTSKNTSTHMAKRW 225

[Close]

BLAST of Pay0020064 vs. NCBI nr
Match: XP_038900478.1 (transcription elongation factor B polypeptide 3-like isoform X1 [Benincasa hispida] >XP_038900479.1 transcription elongation factor B polypeptide 3-like isoform X1 [Benincasa hispida] >XP_038900480.1 transcription elongation factor B polypeptide 3-like isoform X1 [Benincasa hispida])

HSP 1 Score: 426.8 bits (1096), Expect = 1.2e-115
Identity = 217/225 (96.44%), Postives = 221/225 (98.22%), Query Frame = 0


Query: 1   MYRVRKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDL 60
           MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLL+RILPHCTVDQLMHVEKSSEGRDL
Sbjct: 1   MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDL 60

Query: 61  TPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMQDIEKNESKAADRIK 120
           TP+TDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKM+DIEKNESKAADRIK
Sbjct: 61  TPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMKDIEKNESKAADRIK 120

Query: 121 QSYLKENARKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEM 180
           QSY KENARKQSRQIQICSKVPPSSNKRSFGGS YGYNVANTKNKILKKAKIEVLQSQEM
Sbjct: 121 QSYQKENARKQSRQIQICSKVPPSSNKRSFGGSVYGYNVANTKNKILKKAKIEVLQSQEM 180

Query: 181 KNIKAWRRNAVQKSSDIPSTKKPMFPGRESASTSKNTSTHMAKRW 226
           KNIKAWRRNAVQKSSDIPSTKKPMF GRESASTSKNTST MAKRW
Sbjct: 181 KNIKAWRRNAVQKSSDIPSTKKPMFSGRESASTSKNTSTQMAKRW 225

[Close]

BLAST of Pay0020064 vs. TAIR 10
Match: AT2G42780.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684); Has 187 Blast hits to 186 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 29; Plants - 38; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). )

HSP 1 Score: 196.1 bits (497), Expect = 3.1e-50
Identity = 106/228 (46.49%), Postives = 151/228 (66.23%), Query Frame = 0


Query: 5   RKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVT 64
           +K PSLVDLCV KAIDN++++G VG  D  LLE+IL HCT++QL H+E +++  DL+P+T
Sbjct: 8   KKPPSLVDLCVRKAIDNVKYIGYVGGVDFQLLEQILQHCTLEQLKHIEDATDDTDLSPIT 67

Query: 65  DKLWKKFYERQFGKESTTTVIERMRQKRV-AFRWIQLYEAKMQDIEKNESKAADRIKQSY 124
           DK WK FY++ +G+E    +IE +   +V  F+W  LYE K+  +++ E +   R+K+ Y
Sbjct: 68  DKFWKGFYKKHYGEEDMKDLIEDLEWNKVNDFKWRNLYELKVIAVQQKEKELGGRLKERY 127

Query: 125 LKENARKQSRQIQICSKVPPSSNKRSF-GGSGYGYNVANTKNKILKKAKIEVLQSQEMKN 184
             EN RKQSRQ ++CSK PPS  KR F G S  GYN+ + K+ I+KKAKI++L+SQE+KN
Sbjct: 128 KDENERKQSRQTKVCSKAPPS--KRPFWGNSASGYNLGHVKSNIMKKAKIDLLKSQEVKN 187

Query: 185 IKAWRRNAVQKSSDI------------PSTKKPM-FPGRESASTSKNT 218
           + A +RN +QKS  I            PST + + + GR    T KNT
Sbjct: 188 LTAIKRNTIQKSFSISTPKKTGLSANSPSTSRSIPYGGRNLTETKKNT 233

[Close]

BLAST of Pay0020064 vs. TAIR 10
Match: AT2G42780.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684). )

HSP 1 Score: 194.5 bits (493), Expect = 9.1e-50
Identity = 98/200 (49.00%), Postives = 142/200 (71.00%), Query Frame = 0


Query: 5   RKIPSLVDLCVNKAIDNIRFLGDVGETDIHLLERILPHCTVDQLMHVEKSSEGRDLTPVT 64
           +K PSLVDLCV KAIDN++++G VG  D  LLE+IL HCT++QL H+E +++  DL+P+T
Sbjct: 8   KKPPSLVDLCVRKAIDNVKYIGYVGGVDFQLLEQILQHCTLEQLKHIEDATDDTDLSPIT 67

Query: 65  DKLWKKFYERQFGKESTTTVIERMRQKRV-AFRWIQLYEAKMQDIEKNESKAADRIKQSY 124
           DK WK FY++ +G+E    +IE +   +V  F+W  LYE K+  +++ E +   R+K+ Y
Sbjct: 68  DKFWKGFYKKHYGEEDMKDLIEDLEWNKVNDFKWRNLYELKVIAVQQKEKELGGRLKERY 127

Query: 125 LKENARKQSRQIQICSKVPPSSNKRSF-GGSGYGYNVANTKNKILKKAKIEVLQSQEMKN 184
             EN RKQSRQ ++CSK PPS  KR F G S  GYN+ + K+ I+KKAKI++L+SQE+KN
Sbjct: 128 KDENERKQSRQTKVCSKAPPS--KRPFWGNSASGYNLGHVKSNIMKKAKIDLLKSQEVKN 187

Query: 185 IKAWRRNAVQKSSDIPSTKK 203
           + A +RN +QKS  I + K+
Sbjct: 188 LTAIKRNTIQKSFSISAPKR 205

The following BLAST results are available for this feature:

BLAST of Pay0020064 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0020064 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BGR1	1.0e-120	100.00	Transcription elongation factor B polypeptide 3 isoform X2 OS=Cucumis melo var. ...	[more]
A0A1S4E1U0	1.9e-119	100.00	transcription elongation factor B polypeptide 3 isoform X2 OS=Cucumis melo OX=36...	[more]
A0A1S3C4D6	1.9e-119	100.00	transcription elongation factor B polypeptide 3 isoform X1 OS=Cucumis melo OX=36...	[more]
A0A6J1I1I3	1.4e-106	87.11	transcription elongation factor B polypeptide 3 isoform X1 OS=Cucurbita maxima O...	[more]
A0A6J1G8W9	3.1e-106	86.67	transcription elongation factor B polypeptide 3 isoform X1 OS=Cucurbita moschata...	[more]

BLAST of Pay0020064 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98274.1	2.1e-120	100.00	transcription elongation factor B polypeptide 3 isoform X2 [Cucumis melo var. ma...	[more]
XP_016901950.1	3.9e-119	100.00	PREDICTED: transcription elongation factor B polypeptide 3 isoform X2 [Cucumis m...	[more]
XP_008456387.2	3.9e-119	100.00	PREDICTED: transcription elongation factor B polypeptide 3 isoform X1 [Cucumis m...	[more]
XP_004143189.1	1.2e-117	97.78	transcription elongation factor B polypeptide 3 isoform X1 [Cucumis sativus] >KA...	[more]
XP_038900478.1	1.2e-115	96.44	transcription elongation factor B polypeptide 3-like isoform X1 [Benincasa hispi...	[more]

BLAST of Pay0020064 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42780.1	3.1e-50	46.49	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcripti...	[more]
AT2G42780.2	9.1e-50	49.00	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcripti...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 98..118
None	No IPR available	GENE3D	6.10.250.3180		coord: 20..127 e-value: 9.9E-22 score: 79.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..225
None	No IPR available	PANTHER	PTHR47543	OS08G0169600 PROTEIN	coord: 3..220
IPR010684	RNA polymerase II transcription factor SIII, subunit A	PFAM	PF06881	Elongin_A	coord: 26..135 e-value: 9.3E-27 score: 93.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0020064.1	Pay0020064.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006368	transcription elongation from RNA polymerase II promoter
biological_process	GO:0006414	translational elongation
cellular_component	GO:0070449	elongin complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003746	translation elongation factor activity