Pay0019883 (gene) Melon (Payzawat) v1

Overview


Name	Pay0019883
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Ribonuclease H
Location	chr10: 9450111 .. 9452156 (-)
RNA-Seq Expression	Pay0019883
Synteny	Pay0019883

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCCTTGCACTTTTCTTTGCCATCAATAAGTTGAGGCATTATATGCAGGCCATCACGATTCATCTAGTAGCAAAGGCGGACCCTATAAAGTATGTTCTGTCTAGGTCGATTATCTCTGGACGCTTAGCCAAATGGGCGGTTCTACTCCAACAATACGACATTGTCTATATTTCCCAAAAGGCGATAAAAGGACAAGTGTTGGTGGATTTTTGGCGGACCACCCAATTCCTTCAGATTGGAAGTTATGTGAGGATTTTCCAGATGATGAAGTTTTCTTCACGGAAGTGATGGAACCTTGGACTATGTATTTTGATGACGCAACGCGAAGAAGTGCTATGGGTGCATGCATCGTCCTCATTTCTCCTGAAAAACATATGTTGCCTTATAGTTTTGTGCTTGCTAAATTATGCTCAAACAATGTGGCTGAATATCACGTCTTGATAATTGGCCTTCAAATGGCATTAGAAATCGGAGTATCATTCATAGAAATTTACGGCGATTTAAAGTTGATTATTAATCAACTCTTGATCCAGTATGATGTGAAACATGAAGACTTGAAGCCATACTTTGCTTATGCTAGACAATTGATGGAAAGGTTTGACAGTGTGATGCTGGAGCATGTCCCTAGAACAGAAAACAAAAGAGCAGACGCATTGGCAAATTTAGCCACTGCCTTGATGATGCCAGATAACGTAGCTCTAAATATGCCACTTTGTCAACAATGGATTATGCCTCCACTTTTGCCTGAATGTCAGGAAGCGAACGTAACAACATCTCATTTGATTGATGAAGAAGATTGGCGTCAACCCATCATAGAGTATCTTGAGCACGAAAAGCTTCCAAAGGATTCTCGTCATAAAACTGAGGTACGAAGAAAGGCTGCACACTTTATTTATTACAAAGGAACCTTATATCATCGTTCTCTTGAAGGACTCTTTCTTAGATGTCTTGGAAAGGAAGAGTCGATAAAAGCTCTAAAGGAAGCACATGCAAGCGTCTGTGGAGCACATCAATCGGGACCAAAGCTTTAATTTCAGTTGAGAAGAATGGGCTATTATTGGCCTAAGATGGTTCAAGATTCAATGGACTATGCAAAGAAGTGTGAAGCTTATCAATACCATGCAAACTTCATACATTAGCCTCTAGAGCCTCTACATCCAACTGTGGCTTCTTAGCCATTCGAGGCTTGGGGATTCGATCTGGTTGGTCCTATTACACCAAAATCATCAGCAGGACATTCTTATATCCTTGCAGCAACAGATTATTTCTCAAAATGGGCTGAGGCCATTCCCTTGAGAGAGGCCAAGAAGGAGAACGTGGCGAACTTTATTCGTACCCACATCATCTATCGATACGGTATTCCTCACCGGATTGTGACAGATAATGTAAGACAATTCTCTAATAGCATGATAGATAAATTATGTGAAAAATTCAAGTTCAAGCAATACAAGTCATCTATGTACAATGCCGCCGTGAATGGCCTAGCAGAAGCATTCAATAAGACGTTACGCAATCCTCTGAAGAAAATTGTCTCCAAGTCGAAGAGGGATTGGCAAGAAAGAATCGGCGAAGCAGTGGGCTTATCGAACCACTCATTGCACTCCTACAAGGGTTACATCATATTCGCTTATTTACGGTGTAAAGGCTGTCCTTCCCCTCGAAAAAGAAATCCCATCATTAAGAATGGCAGTGCAAGAATGGTTGACTACTGAAGACAATGTCAAGTTACGTCTTCAAGACTTAGAAGCACTTGATGAAAAACGATTAGAAGCTCAGCAAGCATTGGAATGTTACCAAGCCCGAATGTCTAAAGCTTTTAACAAACATGTGAAGGCCCAATCATTTCAAGTTGGTGATTTAGTGCTTGCAGTAAGAAGACCTATCATTACGACAAGGCATACGGGGAATAAGTTCACACCTAAATGGGATGGACCTTATATTGTCAAAGAAGTTTACACAAATGGTGCGTACAAGATTGTTGATCGAGATGGATTAAAAATTGGCCCAATCAACGGCAAGTTTCTCAAGAAATTTTATGCTTAA

mRNA sequence

ATGTGCCTTGCACTTTTCTTTGCCATCAATAAGTTGAGGCATTATATGCAGGCCATCACGATTCATCTAGTAGCAAAGGCGGACCCTATAAAGTATGTTCTGTCTAGGTCGATTATCTCTGGACGCTTAGCCAAATGGGCGTATGATGTGAAACATGAAGACTTGAAGCCATACTTTGCTTATGCTAGACAATTGATGGAAAGGTTTGACAGTGTGATGCTGGAGCATGTCCCTAGAACAGAAAACAAAAGAGCAGACGCATTGGCAAATTTAGCCACTGCCTTGATGATGCCAGATAACGCTGTCCTTCCCCTCGAAAAAGAAATCCCATCATTAAGAATGGCAGTGCAAGAATGGTTGACTACTGAAGACAATGTCAAGTTACGTCTTCAAGACTTAGAAGCACTTGATGAAAAACGATTAGAAGCTCAGCAAGCATTGGAATGTTACCAAGCCCGAATGTCTAAAGCTTTTAACAAACATGTGAAGGCCCAATCATTTCAAGTTGGTGATTTAGTGCTTGCAGTAAGAAGACCTATCATTACGACAAGGCATACGGGGAATAAGTTCACACCTAAATGGGATGGACCTTATATTGTCAAAGAAGTTTACACAAATGGTGCGTACAAGATTGTTGATCGAGATGGATTAAAAATTGGCCCAATCAACGGCAAGTTTCTCAAGAAATTTTATGCTTAA

Coding sequence (CDS)

ATGTGCCTTGCACTTTTCTTTGCCATCAATAAGTTGAGGCATTATATGCAGGCCATCACGATTCATCTAGTAGCAAAGGCGGACCCTATAAAGTATGTTCTGTCTAGGTCGATTATCTCTGGACGCTTAGCCAAATGGGCGTATGATGTGAAACATGAAGACTTGAAGCCATACTTTGCTTATGCTAGACAATTGATGGAAAGGTTTGACAGTGTGATGCTGGAGCATGTCCCTAGAACAGAAAACAAAAGAGCAGACGCATTGGCAAATTTAGCCACTGCCTTGATGATGCCAGATAACGCTGTCCTTCCCCTCGAAAAAGAAATCCCATCATTAAGAATGGCAGTGCAAGAATGGTTGACTACTGAAGACAATGTCAAGTTACGTCTTCAAGACTTAGAAGCACTTGATGAAAAACGATTAGAAGCTCAGCAAGCATTGGAATGTTACCAAGCCCGAATGTCTAAAGCTTTTAACAAACATGTGAAGGCCCAATCATTTCAAGTTGGTGATTTAGTGCTTGCAGTAAGAAGACCTATCATTACGACAAGGCATACGGGGAATAAGTTCACACCTAAATGGGATGGACCTTATATTGTCAAAGAAGTTTACACAAATGGTGCGTACAAGATTGTTGATCGAGATGGATTAAAAATTGGCCCAATCAACGGCAAGTTTCTCAAGAAATTTTATGCTTAA

Protein sequence

MCLALFFAINKLRHYMQAITIHLVAKADPIKYVLSRSIISGRLAKWAYDVKHEDLKPYFAYARQLMERFDSVMLEHVPRTENKRADALANLATALMMPDNAVLPLEKEIPSLRMAVQEWLTTEDNVKLRLQDLEALDEKRLEAQQALECYQARMSKAFNKHVKAQSFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVYTNGAYKIVDRDGLKIGPINGKFLKKFYA

Homology

[Close]

BLAST of Pay0019883 vs. ExPASy TrEMBL
Match: A0A5A7U8J5 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G001310 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 2.2e-70
Identity = 217/628 (34.55%), Postives = 225/628 (35.83%), Query Frame = 0


Query: 1   MCLALFFAINKLRHYMQAITIHLVAKADPIKYVLSRSIISGRLAKWA------------- 60
           MC ALFFAI+KLRHYMQA T+HLVAKADPIKY+LSR+IISGRLAKWA             
Sbjct: 268 MCFALFFAIDKLRHYMQAFTVHLVAKADPIKYILSRAIISGRLAKWAIILQQYDIVYISQ 327

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 328 KAIKGQALADFLADHPIPSDWKLCGDLPDDEVFFTEMVEPWTMYFDGAARRSGAGAGIVL 387

Query: 121 -----------------------------------------------------------Y 180
                                                                      Y
Sbjct: 388 ISPEKHMLPYSFALAELCSNNVAEYQALIIGLQMTLEIEVSFIEIYGDSKLIINQLSLQY 447

Query: 181 DVKHEDLKPYFAYARQLMERFDSVMLEHVPRTENKRADALANLATALMMPDN-------- 233
           DVKHEDLKPYF YARQLMERFDSVMLEHVPRTENKRADALANLATALMMPDN        
Sbjct: 448 DVKHEDLKPYFTYARQLMERFDSVMLEHVPRTENKRADALANLATALMMPDNVALNIPLC 507

[Close]

BLAST of Pay0019883 vs. ExPASy TrEMBL
Match: A0A1S4DUL5 (Ribonuclease H OS=Cucumis melo OX=3656 GN=LOC107990608 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 3.6e-65
Identity = 188/496 (37.90%), Postives = 213/496 (42.94%), Query Frame = 0


Query: 1   MCLALFFAINKLRHYMQAITIHLVAKADPIKYVLSRSIISGRLAKWA------------- 60
           MCLALFFAI+KLRHYMQA TIHLVAKADP+KY+LSR +ISGRLAKWA             
Sbjct: 268 MCLALFFAIDKLRHYMQAFTIHLVAKADPVKYILSRPVISGRLAKWAIILQQYDIVYIPQ 327

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 328 KAVKGQALADFLADHLVPSNWKLCDDLPDEEVLFVESMEPWIMFFDGAARRSGAGVGIVF 387

Query: 121 -----------------------------------------------------------Y 180
                                                                      Y
Sbjct: 388 ISPEKHMLSYSFTLGELCSNNVAEYQAFIIGLLMASEFGIKCIEIFGDSKLIINQLSYQY 447

Query: 181 DVKHEDLKPYFAYARQLMERFDSVMLE--------------------------------- 232
           +VKH+DLKPYF+YAR+LM+RFDS++LE                                 
Sbjct: 448 EVKHQDLKPYFSYARRLMDRFDSIILERSYEGLLLRCLGKEESTKALEEAHSGICGVHQS 507

[Close]

BLAST of Pay0019883 vs. ExPASy TrEMBL
Match: A0A5D3CXS1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00440 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.5e-63
Identity = 193/598 (32.27%), Postives = 221/598 (36.96%), Query Frame = 0


Query: 1    MCLALFFAINKLRHYMQAITIHLVAKADPIKYVLSRSIISGRLAKWA------------- 60
            MCLALFFAI+KLRHYMQA TIHLVAKADP+KY+LSR +ISGRLAKWA             
Sbjct: 890  MCLALFFAIDKLRHYMQAFTIHLVAKADPVKYILSRPVISGRLAKWAIILQQYDIVYIPQ 949

Query: 61   ------------------------------------------------------------ 120
                                                                        
Sbjct: 950  KAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPWIMFFDGAARRSGAGVGIVF 1009

Query: 121  -----------------------------------------------------------Y 180
                                                                       Y
Sbjct: 1010 ISPEKHMLPYSFTLGELCSNNVAEYQAFIIGLQMASEFGIKCIEIFGDSKLIINQLSYQY 1069

Query: 181  DVKHEDLKPYFAYARQLMERFDSVMLEHVPRTENKRADALANLATALMMPDN-------- 232
            +VKH+DLKPYF+YAR+LM+RFDS +LEH+PR+ENK+ADALANLATAL + ++        
Sbjct: 1070 EVKHQDLKPYFSYARRLMDRFDSTILEHIPRSENKKADALANLATALTVSEDIPINISLC 1129

[Close]

BLAST of Pay0019883 vs. ExPASy TrEMBL
Match: A0A5D3DVF5 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold970G00470 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 4.4e-63
Identity = 190/505 (37.62%), Postives = 202/505 (40.00%), Query Frame = 0


Query: 1   MCLALFFAINKLRHYMQAITIHLVAKADPIK----------------------------- 60
           MCLALFFAI+KLRHYMQAITIHLVAKADPIK                             
Sbjct: 213 MCLALFFAIDKLRHYMQAITIHLVAKADPIKTSAGGFLADHPIPSDWKLCEDFPDDEVFF 272

Query: 61  -------------------------------------YVLSRSIISGRLAKW-------- 120
                                                +VL++ + S  +A++        
Sbjct: 273 TEVMEPWTMYFDDAARRSAMGAGIVLISPEKHMLPYSFVLAK-LCSNNVAEYHILIIGLQ 332

Query: 121 -------------------------AYDVKHEDLKPYFAYARQLMERFDSVMLEHVPRTE 180
                                     YDVKHEDLKPYFAYARQLMERFDSVMLEHVPRTE
Sbjct: 333 MALEIGVSFIEIYGDSKLIINQLLLQYDVKHEDLKPYFAYARQLMERFDSVMLEHVPRTE 392

Query: 181 NKRADALANLATALMMPDN----------------------------------------- 216
           NKRAD LANLATALMMPDN                                         
Sbjct: 393 NKRADTLANLATALMMPDNVALNMPLCQQWIMPPVLPECQEANVTTSHLIDEEDWRQPII 452

[Close]

BLAST of Pay0019883 vs. ExPASy TrEMBL
Match: A0A5A7SNS2 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G004460 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.8e-62
Identity = 188/533 (35.27%), Postives = 204/533 (38.27%), Query Frame = 0


Query: 1    MCLALFFAINKLRHYMQAITIHLVAKADPIKYVLSRSIISGRLAKWA------------- 60
            MCLALFF I+KLRHYMQA T+HLVAKADPIKYVLSR IISGRLAKWA             
Sbjct: 556  MCLALFFVIDKLRHYMQAFTVHLVAKADPIKYVLSRPIISGRLAKWAILLQQYDIVYISQ 615

Query: 61   ------------------------------------------------------------ 120
                                                                        
Sbjct: 616  KAIKGQALTDLLADHPIPSYWKLCEDLPDDEVFFTEVMEPWTMYFDGTVRRSGAGAGIIL 675

Query: 121  -----------------------------------------------------------Y 180
                                                                       Y
Sbjct: 676  NSPEKYMLPYSFALAELCSNNVAECQALTIGLQMALEIGVSLIEIYDDLKLIINQLSLQY 735

Query: 181  DVKHEDLKPYFAYARQLMERFDSVMLEHVPRTENKRADALANLATALMMPDNAVL----- 233
            DVKHEDLKPYF YARQLMER DSVMLEHVPR ENKRADAL NLATAL+MPDN  L     
Sbjct: 736  DVKHEDLKPYFTYARQLMERLDSVMLEHVPRIENKRADALVNLATALVMPDNVALNIPLC 795

[Close]

BLAST of Pay0019883 vs. NCBI nr
Match: KAA0051588.1 (uncharacterized protein E6C27_scaffold174G001310 [Cucumis melo var. makuwa])

HSP 1 Score: 275.4 bits (703), Expect = 4.5e-70
Identity = 217/628 (34.55%), Postives = 225/628 (35.83%), Query Frame = 0


Query: 1   MCLALFFAINKLRHYMQAITIHLVAKADPIKYVLSRSIISGRLAKWA------------- 60
           MC ALFFAI+KLRHYMQA T+HLVAKADPIKY+LSR+IISGRLAKWA             
Sbjct: 268 MCFALFFAIDKLRHYMQAFTVHLVAKADPIKYILSRAIISGRLAKWAIILQQYDIVYISQ 327

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 328 KAIKGQALADFLADHPIPSDWKLCGDLPDDEVFFTEMVEPWTMYFDGAARRSGAGAGIVL 387

Query: 121 -----------------------------------------------------------Y 180
                                                                      Y
Sbjct: 388 ISPEKHMLPYSFALAELCSNNVAEYQALIIGLQMTLEIEVSFIEIYGDSKLIINQLSLQY 447

Query: 181 DVKHEDLKPYFAYARQLMERFDSVMLEHVPRTENKRADALANLATALMMPDN-------- 233
           DVKHEDLKPYF YARQLMERFDSVMLEHVPRTENKRADALANLATALMMPDN        
Sbjct: 448 DVKHEDLKPYFTYARQLMERFDSVMLEHVPRTENKRADALANLATALMMPDNVALNIPLC 507

[Close]

BLAST of Pay0019883 vs. NCBI nr
Match: XP_038885779.1 (uncharacterized protein LOC120076069 [Benincasa hispida])

HSP 1 Score: 265.4 bits (677), Expect = 4.6e-67
Identity = 149/247 (60.32%), Postives = 170/247 (68.83%), Query Frame = 0


Query: 2   CLALFFAINKLRHYMQAITIHLVAKADPIKYVLSRSIISGRLAKWAYDVKHEDLKPYFAY 61
           C ALFFAI+KLRHYMQA TIHL+AKADP+KYVLSR IISGRLAKWA              
Sbjct: 45  CPALFFAIDKLRHYMQAFTIHLIAKADPVKYVLSRPIISGRLAKWAI------------- 104

Query: 62  ARQLMERFDSVMLEHVPRTENKRADALA------NLATALMMPDNAVLPLE--------- 121
              +++++D V +   P      AD LA      +   +  +PD+ VL  E         
Sbjct: 105 ---MLQQYDIVYVPERPVKGQALADFLADHPVPSDWKLSEDLPDDEVLFTETSGLSCPSF 164

Query: 122 -KEIPSLRMAVQEWLTTEDNVKLRLQDLEALDEKRLEAQQALECYQARMSKAFNKHVKAQ 181
            K     +             KL LQ+LEALDEKRLEAQQALECYQARMSKAF+KHVK +
Sbjct: 165 GKRNSIAKNGSARRANYRGQPKLLLQELEALDEKRLEAQQALECYQARMSKAFDKHVKPR 224

Query: 182 SFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVYTNGAYKIVDRDGLKIGPINGK 233
            FQVGDLV+AVRRPIITTRHTGNKFTPKWDGPY+VKEVYTNGAYKIVD+DGL+IGPINGK
Sbjct: 225 FFQVGDLVIAVRRPIITTRHTGNKFTPKWDGPYVVKEVYTNGAYKIVDQDGLRIGPINGK 275

[Close]

BLAST of Pay0019883 vs. NCBI nr
Match: XP_016899658.1 (PREDICTED: uncharacterized protein LOC107990608 [Cucumis melo])

HSP 1 Score: 258.1 bits (658), Expect = 7.4e-65
Identity = 188/496 (37.90%), Postives = 213/496 (42.94%), Query Frame = 0


Query: 1   MCLALFFAINKLRHYMQAITIHLVAKADPIKYVLSRSIISGRLAKWA------------- 60
           MCLALFFAI+KLRHYMQA TIHLVAKADP+KY+LSR +ISGRLAKWA             
Sbjct: 268 MCLALFFAIDKLRHYMQAFTIHLVAKADPVKYILSRPVISGRLAKWAIILQQYDIVYIPQ 327

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 328 KAVKGQALADFLADHLVPSNWKLCDDLPDEEVLFVESMEPWIMFFDGAARRSGAGVGIVF 387

Query: 121 -----------------------------------------------------------Y 180
                                                                      Y
Sbjct: 388 ISPEKHMLSYSFTLGELCSNNVAEYQAFIIGLLMASEFGIKCIEIFGDSKLIINQLSYQY 447

Query: 181 DVKHEDLKPYFAYARQLMERFDSVMLE--------------------------------- 232
           +VKH+DLKPYF+YAR+LM+RFDS++LE                                 
Sbjct: 448 EVKHQDLKPYFSYARRLMDRFDSIILERSYEGLLLRCLGKEESTKALEEAHSGICGVHQS 507

[Close]

BLAST of Pay0019883 vs. NCBI nr
Match: TYK16275.1 (uncharacterized protein E5676_scaffold21G00440 [Cucumis melo var. makuwa])

HSP 1 Score: 252.7 bits (644), Expect = 3.1e-63
Identity = 193/598 (32.27%), Postives = 221/598 (36.96%), Query Frame = 0


Query: 1    MCLALFFAINKLRHYMQAITIHLVAKADPIKYVLSRSIISGRLAKWA------------- 60
            MCLALFFAI+KLRHYMQA TIHLVAKADP+KY+LSR +ISGRLAKWA             
Sbjct: 890  MCLALFFAIDKLRHYMQAFTIHLVAKADPVKYILSRPVISGRLAKWAIILQQYDIVYIPQ 949

Query: 61   ------------------------------------------------------------ 120
                                                                        
Sbjct: 950  KAVKGQALADFLADHPVPSNWKLCDDLPDEEVLFVESMEPWIMFFDGAARRSGAGVGIVF 1009

Query: 121  -----------------------------------------------------------Y 180
                                                                       Y
Sbjct: 1010 ISPEKHMLPYSFTLGELCSNNVAEYQAFIIGLQMASEFGIKCIEIFGDSKLIINQLSYQY 1069

Query: 181  DVKHEDLKPYFAYARQLMERFDSVMLEHVPRTENKRADALANLATALMMPDN-------- 232
            +VKH+DLKPYF+YAR+LM+RFDS +LEH+PR+ENK+ADALANLATAL + ++        
Sbjct: 1070 EVKHQDLKPYFSYARRLMDRFDSTILEHIPRSENKKADALANLATALTVSEDIPINISLC 1129

[Close]

BLAST of Pay0019883 vs. NCBI nr
Match: KAA0057706.1 (uncharacterized protein E6C27_scaffold126G00590 [Cucumis melo var. makuwa] >TYK27492.1 uncharacterized protein E5676_scaffold970G00470 [Cucumis melo var. makuwa])

HSP 1 Score: 251.1 bits (640), Expect = 9.1e-63
Identity = 190/505 (37.62%), Postives = 202/505 (40.00%), Query Frame = 0


Query: 1   MCLALFFAINKLRHYMQAITIHLVAKADPIK----------------------------- 60
           MCLALFFAI+KLRHYMQAITIHLVAKADPIK                             
Sbjct: 213 MCLALFFAIDKLRHYMQAITIHLVAKADPIKTSAGGFLADHPIPSDWKLCEDFPDDEVFF 272

Query: 61  -------------------------------------YVLSRSIISGRLAKW-------- 120
                                                +VL++ + S  +A++        
Sbjct: 273 TEVMEPWTMYFDDAARRSAMGAGIVLISPEKHMLPYSFVLAK-LCSNNVAEYHILIIGLQ 332

Query: 121 -------------------------AYDVKHEDLKPYFAYARQLMERFDSVMLEHVPRTE 180
                                     YDVKHEDLKPYFAYARQLMERFDSVMLEHVPRTE
Sbjct: 333 MALEIGVSFIEIYGDSKLIINQLLLQYDVKHEDLKPYFAYARQLMERFDSVMLEHVPRTE 392

Query: 181 NKRADALANLATALMMPDN----------------------------------------- 216
           NKRAD LANLATALMMPDN                                         
Sbjct: 393 NKRADTLANLATALMMPDNVALNMPLCQQWIMPPVLPECQEANVTTSHLIDEEDWRQPII 452

The following BLAST results are available for this feature:

BLAST of Pay0019883 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0019883 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U8J5	2.2e-70	34.55	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G00131...	[more]
A0A1S4DUL5	3.6e-65	37.90	Ribonuclease H OS=Cucumis melo OX=3656 GN=LOC107990608 PE=4 SV=1	[more]
A0A5D3CXS1	1.5e-63	32.27	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DVF5	4.4e-63	37.62	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold970G00470...	[more]
A0A5A7SNS2	2.8e-62	35.27	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G00446...	[more]

BLAST of Pay0019883 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0051588.1	4.5e-70	34.55	uncharacterized protein E6C27_scaffold174G001310 [Cucumis melo var. makuwa]	[more]
XP_038885779.1	4.6e-67	60.32	uncharacterized protein LOC120076069 [Benincasa hispida]	[more]
XP_016899658.1	7.4e-65	37.90	PREDICTED: uncharacterized protein LOC107990608 [Cucumis melo]	[more]
TYK16275.1	3.1e-63	32.27	uncharacterized protein E5676_scaffold21G00440 [Cucumis melo var. makuwa]	[more]
KAA0057706.1	9.1e-63	37.62	uncharacterized protein E6C27_scaffold126G00590 [Cucumis melo var. makuwa] >TYK2...	[more]

BLAST of Pay0019883 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 133..153
None	No IPR available	PANTHER	PTHR24559:SF361	RETROTRANSPOSON, UNCLASSIFIED-LIKE PROTEIN	coord: 8..47 coord: 63..103
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 8..47 coord: 63..103
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 3..101 e-value: 5.9E-11 score: 44.3
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 49..92 e-value: 3.9E-8 score: 33.2
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 41..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0019883.1	Pay0019883.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity