Pay0019763 (gene) Melon (Payzawat) v1

Overview
NamePay0019763
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionThionin-like protein 2
Locationchr01: 34656954 .. 34657514 (+)
RNA-Seq ExpressionPay0019763
SyntenyPay0019763
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATCGGTTATTCTAATTTTCATTTTCTGCTTGATTGCTGGAAGATCCATTGCTGTAATAGATACAGCAAAGTGCTATGTGAAGTGCATGGCAAAATGTGCTATCATACCTATCCCCATCGTTGTTGGCGCTTGTGCTCCAAGATGCATGGTTGACTGCTTTCCCACTTCTTCCCCTTTGGATTCGAGTAGTTACTTTTGTAAGGTTGGCTGCGTCACCTCTCGTTGCACCAAACTCACCACCAAGGAAGACCCCGGTCAGAAACTTTCTAATGCTTCCGTTATTACTTATTTTAATTATTATACATCTATATGTATTTTGTTATTTAGATTTTCTGTCCATTGATTCTTTGACATAACACGTCATTTTTCTTTAAATTTTTAGAGTTAATCTTGTCGTGAATAACAGTCGATAACAAGATTAGTAGTATTTATATTGAATTTTTATGTCATTATTTTTAGAGTTTTGATGGATGTTTTTAATCACATCGGATTGTTTTCTATGAACTTGACAGGAAGTTGTGTGAACACGTGCGGTGAAATATGCGTAAAAGTTTAA

mRNA sequence

ATGAAATCGGTTATTCTAATTTTCATTTTCTGCTTGATTGCTGGAAGATCCATTGCTGTAATAGATACAGCAAAGTGCTATGTGAAGTGCATGGCAAAATGTGCTATCATACCTATCCCCATCGTTGTTGGCGCTTGTGCTCCAAGATGCATGGTTGACTGCTTTCCCACTTCTTCCCCTTTGGATTCGAGTAGTTACTTTTGTAAGGTTGGCTGCGTCACCTCTCGTTGCACCAAACTCACCACCAAGGAAGACCCCGGAAGTTGTGTGAACACGTGCGGTGAAATATGCGTAAAAGTTTAA

Coding sequence (CDS)

ATGAAATCGGTTATTCTAATTTTCATTTTCTGCTTGATTGCTGGAAGATCCATTGCTGTAATAGATACAGCAAAGTGCTATGTGAAGTGCATGGCAAAATGTGCTATCATACCTATCCCCATCGTTGTTGGCGCTTGTGCTCCAAGATGCATGGTTGACTGCTTTCCCACTTCTTCCCCTTTGGATTCGAGTAGTTACTTTTGTAAGGTTGGCTGCGTCACCTCTCGTTGCACCAAACTCACCACCAAGGAAGACCCCGGAAGTTGTGTGAACACGTGCGGTGAAATATGCGTAAAAGTTTAA

Protein sequence

MKSVILIFIFCLIAGRSIAVIDTAKCYVKCMAKCAIIPIPIVVGACAPRCMVDCFPTSSPLDSSSYFCKVGCVTSRCTKLTTKEDPGSCVNTCGEICVKV
Homology
BLAST of Pay0019763 vs. ExPASy TrEMBL
Match: A0A5D3BCH5 (Thionin-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00550 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.4e-20
Identity = 60/110 (54.55%), Postives = 77/110 (70.00%), Query Frame = 0

Query: 1   MKSVILI-FIFCLIAGRSIAVIDTAKCYVKCMAKCAIIPIPIVVGACAPRCMVDCFP-TS 60
           M+S++LI FI  L+AGRS  V+DTAK +VKCMA+CAI+PI  VV  CA +CM DC P  S
Sbjct: 1   MRSIVLIHFILSLVAGRSTPVLDTAKWFVKCMAECAILPIIPVVSICAVKCMADCIPVAS 60

Query: 61  SPLD----SSSYFCKVGCVTSRCTKLTTKED-----PGSCVNTCGEICVK 100
           SP+D     + YFCK+GC T RCTKL+TK+D       +C NTC + C+K
Sbjct: 61  SPMDLNRMDTHYFCKLGCTTYRCTKLSTKKDLVENKVETCGNTCDQTCMK 110

BLAST of Pay0019763 vs. ExPASy TrEMBL
Match: A0A6J1KDK0 (thionin-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111494667 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.8e-14
Identity = 53/110 (48.18%), Postives = 66/110 (60.00%), Query Frame = 0

Query: 1   MKSVILI-FIFCLIAGRSIAVIDTAKCYVKCMAKCAIIPIPIVVGACAPRCMVDC-FPTS 60
           MKSV++I FI  L+AGRS A     KCY KC   CAI P  + +G C  +C+ DC F  S
Sbjct: 36  MKSVVVICFILSLVAGRSTA--SFGKCYAKCFIVCAITP-GVPIGTCGGKCLADCLFLAS 95

Query: 61  SPLD----SSSYFCKVGCVTSRCTKLTTKEDPG-----SCVNTCGEICVK 100
           +P D     + YFCK+GC TS CTK +TK DP      SCVN+C   C+K
Sbjct: 96  APRDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNSCSRTCLK 142

BLAST of Pay0019763 vs. ExPASy TrEMBL
Match: A0A0A0KC18 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G446640 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.8e-14
Identity = 52/93 (55.91%), Postives = 61/93 (65.59%), Query Frame = 0

Query: 1  MKSVILI-FIFCLIAGRSIAVIDTAKCYVKCMAKCAIIPIPIVVGACAPRCMVDC-FPTS 60
          MKSV+LI FI  L+AGRS A     KCY KC   CAI P  I VG C  +C+ DC F  S
Sbjct: 1  MKSVVLICFILSLVAGRSTA--SFGKCYAKCFIVCAITP-GIPVGTCGAKCLADCLFIAS 60

Query: 61 SPLD----SSSYFCKVGCVTSRCTKLTTKEDPG 88
          SP+D     + YFCK+GC TSRCTK +TK+DPG
Sbjct: 61 SPMDLNYMDTHYFCKLGCATSRCTKFSTKKDPG 90

BLAST of Pay0019763 vs. ExPASy TrEMBL
Match: A0A6J1DDL8 (thionin-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111019402 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.3e-11
Identity = 45/107 (42.06%), Postives = 63/107 (58.88%), Query Frame = 0

Query: 4   VILIFIFCLIAGRSIAVIDTAKCYVKCMAKCAIIPIPIVVGACAPRCMVDCF--PTSSPL 63
           ++++ +  L+AG+S A     KCY KC   CAI P  I VG CA +C+ DC     S+  
Sbjct: 7   ILVMLVLSLVAGKSTA--SFGKCYAKCFVVCAITP-GIPVGTCAAKCLTDCLFRAASTTA 66

Query: 64  D-----SSSYFCKVGCVTSRCTKLTTKEDP-----GSCVNTCGEICV 99
           D      + YFCK+GC TS CTK +TK+DP     GSCV++C + C+
Sbjct: 67  DFNDQIDTRYFCKLGCATSLCTKFSTKKDPAEKKVGSCVDSCSQKCI 110

BLAST of Pay0019763 vs. ExPASy TrEMBL
Match: A0A061GI20 (To encode a PR protein, Belongs to the plant thionin family with the following members:, putative OS=Theobroma cacao OX=3641 GN=TCM_028643 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.2e-09
Identity = 42/103 (40.78%), Postives = 59/103 (57.28%), Query Frame = 0

Query: 7   IFIFCLIAGRSI--AVIDTAKCYVKCMAKCAIIPIPIVVGACAPRCMVDCFPTSSPLDS- 66
           + + CL+ G  +  +     KCY  C   C  IP P  V +CA +C+ +C   SS L+S 
Sbjct: 48  VMMVCLVLGLLVGQSTASFQKCYAGCFLLCVFIP-PNPVFSCAIKCLNECIIPSSTLESG 107

Query: 67  --SSYFCKVGCVTSRCTKLTTKEDP-----GSCVNTCGEICVK 100
             + YFCK+GC TS CT L++KE+P     GSCV++C E C K
Sbjct: 108 KDTQYFCKLGCATSLCTDLSSKENPGEQKVGSCVDSCSETCAK 149

BLAST of Pay0019763 vs. NCBI nr
Match: KAA0037367.1 (thionin-like protein 2 [Cucumis melo var. makuwa] >TYJ97540.1 thionin-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 107.1 bits (266), Expect = 9.1e-20
Identity = 60/110 (54.55%), Postives = 77/110 (70.00%), Query Frame = 0

Query: 1   MKSVILI-FIFCLIAGRSIAVIDTAKCYVKCMAKCAIIPIPIVVGACAPRCMVDCFP-TS 60
           M+S++LI FI  L+AGRS  V+DTAK +VKCMA+CAI+PI  VV  CA +CM DC P  S
Sbjct: 1   MRSIVLIHFILSLVAGRSTPVLDTAKWFVKCMAECAILPIIPVVSICAVKCMADCIPVAS 60

Query: 61  SPLD----SSSYFCKVGCVTSRCTKLTTKED-----PGSCVNTCGEICVK 100
           SP+D     + YFCK+GC T RCTKL+TK+D       +C NTC + C+K
Sbjct: 61  SPMDLNRMDTHYFCKLGCTTYRCTKLSTKKDLVENKVETCGNTCDQTCMK 110

BLAST of Pay0019763 vs. NCBI nr
Match: XP_038899787.1 (thionin-like protein 2 [Benincasa hispida])

HSP 1 Score: 95.9 bits (237), Expect = 2.1e-16
Identity = 58/110 (52.73%), Postives = 69/110 (62.73%), Query Frame = 0

Query: 1   MKSVILI-FIFCLIAGRSIAVIDTAKCYVKCMAKCAIIPIPIVVGACAPRCMVDC-FPTS 60
           MKSVILI FI  L+ GRS A     KCY KC   CAI P  I +G C  +C+ DC F  S
Sbjct: 1   MKSVILICFIMSLVVGRSTA--SFGKCYAKCFVVCAITP-GIPIGTCGAKCLGDCLFIAS 60

Query: 61  SPLD----SSSYFCKVGCVTSRCTKLTTKEDPG-----SCVNTCGEICVK 100
           SPLD     + YFCK+GC TS CTK +TK+DP      SCVN+CG+ C+K
Sbjct: 61  SPLDFNHLDTHYFCKLGCATSLCTKFSTKKDPAEKKVESCVNSCGQTCIK 107

BLAST of Pay0019763 vs. NCBI nr
Match: XP_004152967.1 (thionin-like protein 2 [Cucumis sativus] >KAE8646463.1 hypothetical protein Csa_015837 [Cucumis sativus])

HSP 1 Score: 95.9 bits (237), Expect = 2.1e-16
Identity = 55/110 (50.00%), Postives = 73/110 (66.36%), Query Frame = 0

Query: 1   MKSVILI-FIFCLIAGRSIAVIDTAKCYVKCMAKCAIIPIPIVVGACAPRCMVDCFP-TS 60
           M+SV+LI FI  L+AG+S AVI+ +KCY+ CMA CA+    + VG CA +C  DC    S
Sbjct: 1   MRSVVLICFILSLVAGKSTAVIEVSKCYLNCMAVCAVPSSLLTVGLCALKCTADCIAIAS 60

Query: 61  SPLD----SSSYFCKVGCVTSRCTKLTTKED-----PGSCVNTCGEICVK 100
           SP++     + YFCK+GC TS CTK +TK+D       SCVNTC +IC+K
Sbjct: 61  SPMNLNRVDTRYFCKLGCATSCCTKSSTKKDFAEKKVESCVNTCDQICMK 110

BLAST of Pay0019763 vs. NCBI nr
Match: KAG7025781.1 (Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 91.7 bits (226), Expect = 4.0e-15
Identity = 53/110 (48.18%), Postives = 67/110 (60.91%), Query Frame = 0

Query: 1   MKSVILI-FIFCLIAGRSIAVIDTAKCYVKCMAKCAIIPIPIVVGACAPRCMVDC-FPTS 60
           MKS+++I FI  L+AGRS A     KCY KC   CAI P  + +G C  +C+ DC FP S
Sbjct: 1   MKSIVVICFILSLVAGRSTA--SFGKCYAKCFIVCAITP-GVPIGTCGGKCLADCLFPAS 60

Query: 61  SPLD----SSSYFCKVGCVTSRCTKLTTKEDPG-----SCVNTCGEICVK 100
           +P D     + YFCK+GC TS CTK +TK DP      SCVN+C   C+K
Sbjct: 61  APTDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNSCSRTCLK 107

BLAST of Pay0019763 vs. NCBI nr
Match: KAG6593441.1 (Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 91.3 bits (225), Expect = 5.2e-15
Identity = 53/110 (48.18%), Postives = 67/110 (60.91%), Query Frame = 0

Query: 1   MKSVILI-FIFCLIAGRSIAVIDTAKCYVKCMAKCAIIPIPIVVGACAPRCMVDC-FPTS 60
           MKS+++I FI  L+AGRS A     KCY KC   CAI P  + +G C  +C+ DC FP S
Sbjct: 1   MKSIVVICFILSLVAGRSTA--SFGKCYAKCFIVCAITP-GVPIGTCGGKCLADCLFPAS 60

Query: 61  SPLD----SSSYFCKVGCVTSRCTKLTTKEDPG-----SCVNTCGEICVK 100
           +P D     + YFCK+GC TS CTK +TK DP      SCVN+C   C+K
Sbjct: 61  APRDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNSCSRTCLK 107

BLAST of Pay0019763 vs. TAIR 10
Match: AT1G12663.1 (Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660. )

HSP 1 Score: 43.9 bits (102), Expect = 8.8e-05
Identity = 33/109 (30.28%), Postives = 52/109 (47.71%), Query Frame = 0

Query: 4   VILIFIFCLIAGRSIAVIDTAKCYVKCMAKC-AIIPIPIVVGACAPRCMVDCFPTSSP-- 63
           +I++ I  L+A  +   I   +CY  C+ +C A    P  +  C   C  +C    SP  
Sbjct: 6   MIVMVIGNLLAQTAAQKIPFKECYPACLVECKAGSKFPKYL-KCPFTCTKECLQQPSPPS 65

Query: 64  -----LDSSSYFCKVGCVTSRCTKLTTKEDP-----GSCVNTCGEICVK 100
                +D S YFCK+GC T  C  L++ ++P      +CV++C   C K
Sbjct: 66  VSSNNIDESDYFCKLGCATYHCVSLSSIQNPNVERVSACVDSCSNKCTK 113

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BCH54.4e-2054.55Thionin-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold8... [more]
A0A6J1KDK02.8e-1448.18thionin-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111494667 PE=4 SV=1[more]
A0A0A0KC182.8e-1455.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G446640 PE=4 SV=1[more]
A0A6J1DDL81.3e-1142.06thionin-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111019402 PE=4 SV=1[more]
A0A061GI201.2e-0940.78To encode a PR protein, Belongs to the plant thionin family with the following m... [more]
Match NameE-valueIdentityDescription
KAA0037367.19.1e-2054.55thionin-like protein 2 [Cucumis melo var. makuwa] >TYJ97540.1 thionin-like prote... [more]
XP_038899787.12.1e-1652.73thionin-like protein 2 [Benincasa hispida][more]
XP_004152967.12.1e-1650.00thionin-like protein 2 [Cucumis sativus] >KAE8646463.1 hypothetical protein Csa_... [more]
KAG7025781.14.0e-1548.18Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6593441.15.2e-1548.18Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia][more]
Match NameE-valueIdentityDescription
AT1G12663.18.8e-0530.28Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant t... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038975Thionin-like proteinPANTHERPTHR36312THIONIN-LIKE PROTEIN 1coord: 4..99
NoneNo IPR availablePANTHERPTHR36312:SF1THIONIN-LIKE PROTEIN 1coord: 4..99

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0019763.1Pay0019763.1mRNA