Pay0019733 (gene) Melon (Payzawat) v1

Overview


Name	Pay0019733
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	RING-type E3 ubiquitin transferase
Location	chr12: 25858424 .. 25860781 (-)
RNA-Seq Expression	Pay0019733
Synteny	Pay0019733

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCACAACAAATAATAACGTTGAGAACCAACACAAAGAGGAAAATTGAGAGCAGAGGAATGAACAGATTATTGGAAGAAGAAGCAGTGGACGAGATTCTTTCATTTGCCTCCGACTTCCCATCCCACGAGGATGAAGCCGTTGATCTCCTCCTCGATGTCATCACAACCGAACTTACATCAAGTACTACTACATTTTTCTTTAATAAATTTTGTATGTTTCATAGGGTTGGATATGCATTATATATAATTGAATTTATTCTCGTCTTTTAAGTTATTTGATGATTTAAAATGATATCAAAGTAAGTTAGTTTAAAATGTCGTTTGCTCAAACCCTAATATCGATCAACTTTAGCTTCTAGGTCAATTGGTGATTTAAGATTGATTTTTAAGTTGATACGGCGGAGTTAGAAACTTTGATGAATAGTATATGTTTAATGTCAATTGAATTATACTTGTTTTAGCAAATTTTCTTATGTTCTAAGGAGACATATTAACGTACATCTATATTGATAATTCGATCATTTAAGTTAAATGAATTTGGTTTATGATAGAGTGGCAATGATAACTTTTTTTAGTAGGAGTAGTTCTTTCTATTCTTTTTAACTTGAAGGTTCCATCGTTGATTTGTGTTAATTTTTTATCTTTAAACTTTTAAAAGAAAATCATAAGTTTTAATTTTGTATATAATAGGTTCTAATATGTTCATCGGATAGATAGAAAATAATTTATTTTATATCTCTTAGAATTTAAAAAATATTTAAGTAGACTTATAAATTTTTAAAAATAAACTTTTGAAAATATTGATCGTCTATTAGACTAAATTTGTAATTTAATAGAAAATGCACAGATTGCTATTTCAAAAATGATATTTGAATCTCACCCAATTGTTGAAGCACAAAAAAAGAATAGAAAGAAACAGTCTTCCTTTTATATTTTCTTCCTTACTTTAAAAGAAATTTCCATTATTAGTTCTTTATTACAAAAGGTGTAATTATTTGTTTTGGGTATAATTTGTATGCAATTTTTCAAAAAGAATTTACCATGCGACAAAATTTGATTGGAAATTTCGGTGAAATACATGAAAATAGGCGATGTTCAAGATATGCCTAAATATTCTTCAATTATTTGTTGATTTGATAGATCGAGCTCGAGTAATAGATATGGATTTAGTTCATTGGGCAGTTACCCTTTTACGTGCTGCCAATAATGCTAGTGCCGATTCAACACCACAGGTGATTTCTTTTTTAAGTTCTATTTTCTAGTTTTAGTATTTATTTGTAAAGATGGATTCCATCTAAGTTTAATCTTAATAATCAGTAAGACCTAAAAACCGTTTTTCTAACGATAGACAAGAAGTCACAAACAAATACGAGGTTGTTTGATTCACCAAATGAAGTTAATAAATATAAGTTAACTTAACAAGTTTTTATTAATGTAGAGTTTAATACGGAGTAACAAATGTACGGTTTCACTGGTGTTTAGTATTAAAATTGAATTTTTTACCAAACTTAATAAGTTAGTAGGCCAAACAACTTGATACAATCCATAGTTTAAATCTTAGGATAATTATTATTGTTAGTAATTTCAGAAATAATAATTAGATAATCTAAGAATTTTTCTAATAATTAAGTAATTGCAATATTTAAAAAAATTACAAATATAGCAAATTCTATTGTAGATAAACTTTGACAAATTTTGTTATAATTGTATTTTTTTAAAATGTTGATATATACGTGATCAATTTAAATATAATTGTTATATTTGTAATTATTTCTCAAATCTTTTAAATTTTAGTTTTTAAAACTACACTAAAAATTCATAAAATTTCAAAATTTTGTCTTTTATATAGTAATTTTATAAAATTAAAATTAAAAAGATCATATACTAAAATTTTAATTTTTTTAAAAAGAAAGAAACTTGTAATGTTAAATTTCTAATTAGCCTTATTTTCCTCTATGAACTAATATGCAGGACGCCAATTTCGAAAGCGATATTCTTGAAACGAGGGAAAGTATAGTAGACCTTACCGATTCTAATGTTACGGACTTATTGGATGATGACGATGTGGATATTTGGATGCACGTGAGACAACTTTCTCTAGACGATCTGATCCGTCACGCAAGCTTCCCGTTCGGAGCTTCAAAATCGGCGATTCAGGCACTACCAGATGTTTTTCCTGCGGATGACTTTTCTTCTTCTTGGGCGTGTGCTGTGTGTATGGATGACGAGATTGATGCAAAGGATGGGGCGAAACAGCTACCCTGTGAACACATATTTCATACACATTGTATTATTTCTTGGTTGGAATTGCACAATTCTTGCCCACTTTGTCGATACAAATTGCCCACATAG

mRNA sequence

ATGGAAGCACAACAAATAATAACGTTGAGAACCAACACAAAGAGGAAAATTGAGAGCAGAGGAATGAACAGATTATTGGAAGAAGAAGCAGTGGACGAGATTCTTTCATTTGCCTCCGACTTCCCATCCCACGAGGATGAAGCCGTTGATCTCCTCCTCGATGTCATCACAACCGAACTTACATCAAATCGAGCTCGAGTAATAGATATGGATTTAGTTCATTGGGCAGTTACCCTTTTACGTGCTGCCAATAATGCTAGTGCCGATTCAACACCACAGGACGCCAATTTCGAAAGCGATATTCTTGAAACGAGGGAAAGTATAGTAGACCTTACCGATTCTAATGTTACGGACTTATTGGATGATGACGATGTGGATATTTGGATGCACGTGAGACAACTTTCTCTAGACGATCTGATCCGTCACGCAAGCTTCCCGTTCGGAGCTTCAAAATCGGCGATTCAGGCACTACCAGATGTTTTTCCTGCGGATGACTTTTCTTCTTCTTGGGCGTGTGCTGTGTGTATGGATGACGAGATTGATGCAAAGGATGGGGCGAAACAGCTACCCTGTGAACACATATTTCATACACATTGTATTATTTCTTGGTTGGAATTGCACAATTCTTGCCCACTTTGTCGATACAAATTGCCCACATAG

Coding sequence (CDS)

ATGGAAGCACAACAAATAATAACGTTGAGAACCAACACAAAGAGGAAAATTGAGAGCAGAGGAATGAACAGATTATTGGAAGAAGAAGCAGTGGACGAGATTCTTTCATTTGCCTCCGACTTCCCATCCCACGAGGATGAAGCCGTTGATCTCCTCCTCGATGTCATCACAACCGAACTTACATCAAATCGAGCTCGAGTAATAGATATGGATTTAGTTCATTGGGCAGTTACCCTTTTACGTGCTGCCAATAATGCTAGTGCCGATTCAACACCACAGGACGCCAATTTCGAAAGCGATATTCTTGAAACGAGGGAAAGTATAGTAGACCTTACCGATTCTAATGTTACGGACTTATTGGATGATGACGATGTGGATATTTGGATGCACGTGAGACAACTTTCTCTAGACGATCTGATCCGTCACGCAAGCTTCCCGTTCGGAGCTTCAAAATCGGCGATTCAGGCACTACCAGATGTTTTTCCTGCGGATGACTTTTCTTCTTCTTGGGCGTGTGCTGTGTGTATGGATGACGAGATTGATGCAAAGGATGGGGCGAAACAGCTACCCTGTGAACACATATTTCATACACATTGTATTATTTCTTGGTTGGAATTGCACAATTCTTGCCCACTTTGTCGATACAAATTGCCCACATAG

Protein sequence

MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLDVITTELTSNRARVIDMDLVHWAVTLLRAANNASADSTPQDANFESDILETRESIVDLTDSNVTDLLDDDDVDIWMHVRQLSLDDLIRHASFPFGASKSAIQALPDVFPADDFSSSWACAVCMDDEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT

Homology

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BLAST of Pay0019733 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.1e-18
Identity = 47/91 (51.65%), Postives = 62/91 (68.13%), Query Frame = 0


Query: 131 VRQLSLDDLIRHASFPFGASKSAIQALPDVFPADDF--SSSWACAVCMDDEIDAKDGAKQ 190
           ++QL+ +D  R+ + P  ASKSAI ALP V    D   S    CAVCMD+  D  D  KQ
Sbjct: 175 IQQLAENDPNRYGTPP--ASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSD-VKQ 234

Query: 191 LPCEHIFHTHCIISWLELHNSCPLCRYKLPT 220
           +PC+H+FH  C++ WLELHNSCP+CR++LPT
Sbjct: 235 MPCKHVFHQDCLLPWLELHNSCPVCRFELPT 262

[Close]

BLAST of Pay0019733 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.3e-16
Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = 0


Query: 131 VRQLSLDDLIRHASFPFGASKSAIQALP--DVFPADDFSSSWACAVCMDDEIDAKDGAKQ 190
           ++QL+ +D  R+ + P  ASKSAI+ALP  ++  ++  S    CAVCMDD  +  + AKQ
Sbjct: 183 IQQLAENDPNRYGTPP--ASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTE-AKQ 242

Query: 191 LPCEHIFHTHCIISWLELHNSCPLCRYKLPT 220
           +PC+H++H  C++ WLELHNSCP+CR++LPT
Sbjct: 243 MPCKHLYHKDCLLPWLELHNSCPVCRHELPT 270

[Close]

BLAST of Pay0019733 vs. ExPASy Swiss-Prot
Match: Q6AVN2 (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.2e-14
Identity = 39/89 (43.82%), Postives = 59/89 (66.29%), Query Frame = 0


Query: 131 VRQLSLDDLIRHASFPFGASKSAIQALPDVFPADDFSSSWACAVCMDDEIDAKDGAKQLP 190
           ++ L+  D  R+ + P  A K A++ALP V          +C+VC+DD ++    AKQ+P
Sbjct: 164 LQHLAESDPSRNGTPP--AKKEAVEALPTV----KIEEVVSCSVCLDD-LEVGSQAKQMP 223

Query: 191 CEHIFHTHCIISWLELHNSCPLCRYKLPT 220
           CEH FH+ CI+ WLELH+SCP+CR++LP+
Sbjct: 224 CEHKFHSSCILPWLELHSSCPVCRFELPS 245

[Close]

BLAST of Pay0019733 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.1e-12
Identity = 38/80 (47.50%), Postives = 48/80 (60.00%), Query Frame = 0


Query: 142 HASFPFGASKSAIQALPDVFPADDF--SSSWACAVCMDDEIDAKDGAKQLPCEHIFHTHC 201
           H   P  A KS+I ALP +        SS   C VC  DE + K  AKQ+PC HI+H+ C
Sbjct: 154 HHRGPPPAPKSSIDALPTIKITQKHLKSSDSHCPVC-KDEFELKSEAKQMPCHHIYHSDC 213

Query: 202 IISWLELHNSCPLCRYKLPT 220
           I+ WL  HNSCP+CR +LP+
Sbjct: 214 IVPWLVQHNSCPVCRKELPS 232

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BLAST of Pay0019733 vs. ExPASy Swiss-Prot
Match: O22283 (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RHC2A PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.5e-12
Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 0


Query: 149 ASKSAIQALP--DVFPADDFSSSWA-CAVCMDDEIDAKDGAKQLPCEHIFHTHCIISWLE 208
           ASKSAI+ALP  ++ P    S S + CAVC ++ +  K  A+++PC HI+H  CI+ WL 
Sbjct: 175 ASKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFV-LKSSAREMPCNHIYHPDCILPWLA 234

Query: 209 LHNSCPLCRYKLP 219
           + NSCP+CR++LP
Sbjct: 235 IRNSCPVCRHELP 246

[Close]

BLAST of Pay0019733 vs. ExPASy TrEMBL
Match: A0A1S3BES6 (ERAD-associated E3 ubiquitin-protein ligase HRD1-like OS=Cucumis melo OX=3656 GN=LOC103488881 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 4.5e-118
Identity = 217/219 (99.09%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 1   MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLDVITTEL 60
           MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLDVITTEL
Sbjct: 1   MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLDVITTEL 60

Query: 61  TSNRARVIDMDLVHWAVTLLRAANNASADSTPQDANFESDILETRESIVDLTDSNVTDLL 120
           TSNRARVIDMDLVHWAVTLLRAANN SADSTPQDANFESDILETRESIVDLTDSNVTDLL
Sbjct: 61  TSNRARVIDMDLVHWAVTLLRAANNTSADSTPQDANFESDILETRESIVDLTDSNVTDLL 120

Query: 121 DDDDVDIWMHVRQLSLDDLIRHASFPFGASKSAIQALPDVFPADDFSSSWACAVCMDDEI 180
           DDDDVDIWMHVRQLSLDDLIRHASFPFGASKSAIQALPDVFP DDFSSSWACAVCMDDEI
Sbjct: 121 DDDDVDIWMHVRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMDDEI 180

Query: 181 DAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT 220
           DAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT
Sbjct: 181 DAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT 219

[Close]

BLAST of Pay0019733 vs. ExPASy TrEMBL
Match: A0A0A0LQL0 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G043080 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.2e-81
Identity = 164/225 (72.89%), Postives = 182/225 (80.89%), Query Frame = 0


Query: 1   MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLDVITTEL 60
           ME QQ  TL+ NT+RKIE RGMNRLLEEEAVDEI+SFASDFPSHED+AVDLLLD IT E 
Sbjct: 1   METQQRTTLKNNTERKIERRGMNRLLEEEAVDEIISFASDFPSHEDDAVDLLLDFITNEH 60

Query: 61  TSNRARVIDMDLVHWAVTLLRAAN-----NASADSTPQDANFESDILETRESIVDLTDSN 120
           TSN A  IDM+LVHWA+  LRAA+       S  ST Q+A  ESDILETRE +VD+TDSN
Sbjct: 61  TSNGALAIDMNLVHWAINHLRAADAVVDVTNSVSSTQQNAYLESDILETREGVVDVTDSN 120

Query: 121 VTDLLDDDDVDIWM-HVRQLSLDDLIRHASFPFGASKSAIQALPDVFPADDFSSSWACAV 180
             DLLD DD ++WM HVRQLSL+DL  H  FPF ASKS IQALPDVF A DFSSSW C V
Sbjct: 121 --DLLDADDEEMWMAHVRQLSLNDLSLHEGFPFRASKSTIQALPDVFTAKDFSSSWVCGV 180

Query: 181 CMDDEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT 220
           C++DEI+A DGAKQLPC+HIFHTHCIISWLEL NSCPLCRY+LPT
Sbjct: 181 CLNDEIEANDGAKQLPCKHIFHTHCIISWLELCNSCPLCRYQLPT 223

[Close]

BLAST of Pay0019733 vs. ExPASy TrEMBL
Match: A0A5D3BH26 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002660 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.7e-70
Identity = 152/196 (77.55%), Postives = 152/196 (77.55%), Query Frame = 0


Query: 1   MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLDVITTEL 60
           MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLD      
Sbjct: 1   MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLD------ 60

Query: 61  TSNRARVIDMDLVHWAVTLLRAANNASADSTPQDANFESDILETRESIVDLTDSNVTDLL 120
                                            DANFESDILETRESIVDLTDSNVTDLL
Sbjct: 61  ---------------------------------DANFESDILETRESIVDLTDSNVTDLL 120

Query: 121 DDDDVDIWMHVRQLSLDDLIRHASFPFGASKSAIQALPDVFPADDFSSSWACAVCMDDEI 180
           DDDDVDIWMHVRQLSLDDLIRHASFPFGASKSAIQALPDVFP DDFSSSWACAVCMDDEI
Sbjct: 121 DDDDVDIWMHVRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMDDEI 157

Query: 181 DAKDGAKQLPCEHIFH 197
           DAKDGAKQLP   I H
Sbjct: 181 DAKDGAKQLPSLRISH 157

[Close]

BLAST of Pay0019733 vs. ExPASy TrEMBL
Match: A0A2I4GZI1 (RING-type E3 ubiquitin transferase OS=Juglans regia OX=51240 GN=LOC109012220 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 5.9e-17
Identity = 46/91 (50.55%), Postives = 67/91 (73.63%), Query Frame = 0


Query: 131 VRQLSLDDLIRHASFPFGASKSAIQALPDVFPADDF--SSSWACAVCMDDEIDAKDGAKQ 190
           ++QL+ +D  R+ + P  ASKSA+Q LP++  ++D   S SW CAVC  D  +  + AKQ
Sbjct: 174 IQQLAENDPNRYGTPP--ASKSAVQELPNITISEDLLASDSWQCAVC-KDTFELGEEAKQ 233

Query: 191 LPCEHIFHTHCIISWLELHNSCPLCRYKLPT 220
           +PC+HI+H+ CI+ WLELHNSCP+CR++LPT
Sbjct: 234 MPCKHIYHSDCILPWLELHNSCPVCRHELPT 261

[Close]

BLAST of Pay0019733 vs. ExPASy TrEMBL
Match: A0A7N2RC25 (RING-type E3 ubiquitin transferase OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.0e-16
Identity = 47/91 (51.65%), Postives = 65/91 (71.43%), Query Frame = 0


Query: 131 VRQLSLDDLIRHASFPFGASKSAIQALPDVFPADDF--SSSWACAVCMDDEIDAKDGAKQ 190
           ++QL+ +D  R+ + P  ASKSA+Q LPD+  + D   S S  CAVC  D  + ++ AKQ
Sbjct: 201 IQQLAENDPNRYGTPP--ASKSAVQTLPDIKISQDLLASDSSQCAVC-KDSFELREEAKQ 260

Query: 191 LPCEHIFHTHCIISWLELHNSCPLCRYKLPT 220
           +PC+HI+H  CI+ WLELHNSCP+CRY+LPT
Sbjct: 261 MPCKHIYHADCILPWLELHNSCPVCRYELPT 288

[Close]

BLAST of Pay0019733 vs. NCBI nr
Match: XP_008446033.1 (PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1-like [Cucumis melo])

HSP 1 Score: 433.7 bits (1114), Expect = 9.3e-118
Identity = 217/219 (99.09%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 1   MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLDVITTEL 60
           MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLDVITTEL
Sbjct: 1   MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLDVITTEL 60

Query: 61  TSNRARVIDMDLVHWAVTLLRAANNASADSTPQDANFESDILETRESIVDLTDSNVTDLL 120
           TSNRARVIDMDLVHWAVTLLRAANN SADSTPQDANFESDILETRESIVDLTDSNVTDLL
Sbjct: 61  TSNRARVIDMDLVHWAVTLLRAANNTSADSTPQDANFESDILETRESIVDLTDSNVTDLL 120

Query: 121 DDDDVDIWMHVRQLSLDDLIRHASFPFGASKSAIQALPDVFPADDFSSSWACAVCMDDEI 180
           DDDDVDIWMHVRQLSLDDLIRHASFPFGASKSAIQALPDVFP DDFSSSWACAVCMDDEI
Sbjct: 121 DDDDVDIWMHVRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMDDEI 180

Query: 181 DAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT 220
           DAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT
Sbjct: 181 DAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT 219

[Close]

BLAST of Pay0019733 vs. NCBI nr
Match: KGN64205.1 (hypothetical protein Csa_014029 [Cucumis sativus])

HSP 1 Score: 312.8 bits (800), Expect = 2.4e-81
Identity = 164/225 (72.89%), Postives = 182/225 (80.89%), Query Frame = 0


Query: 1   MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLDVITTEL 60
           ME QQ  TL+ NT+RKIE RGMNRLLEEEAVDEI+SFASDFPSHED+AVDLLLD IT E 
Sbjct: 1   METQQRTTLKNNTERKIERRGMNRLLEEEAVDEIISFASDFPSHEDDAVDLLLDFITNEH 60

Query: 61  TSNRARVIDMDLVHWAVTLLRAAN-----NASADSTPQDANFESDILETRESIVDLTDSN 120
           TSN A  IDM+LVHWA+  LRAA+       S  ST Q+A  ESDILETRE +VD+TDSN
Sbjct: 61  TSNGALAIDMNLVHWAINHLRAADAVVDVTNSVSSTQQNAYLESDILETREGVVDVTDSN 120

Query: 121 VTDLLDDDDVDIWM-HVRQLSLDDLIRHASFPFGASKSAIQALPDVFPADDFSSSWACAV 180
             DLLD DD ++WM HVRQLSL+DL  H  FPF ASKS IQALPDVF A DFSSSW C V
Sbjct: 121 --DLLDADDEEMWMAHVRQLSLNDLSLHEGFPFRASKSTIQALPDVFTAKDFSSSWVCGV 180

Query: 181 CMDDEIDAKDGAKQLPCEHIFHTHCIISWLELHNSCPLCRYKLPT 220
           C++DEI+A DGAKQLPC+HIFHTHCIISWLEL NSCPLCRY+LPT
Sbjct: 181 CLNDEIEANDGAKQLPCKHIFHTHCIISWLELCNSCPLCRYQLPT 223

[Close]

BLAST of Pay0019733 vs. NCBI nr
Match: TYJ99062.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 275.0 bits (702), Expect = 5.5e-70
Identity = 152/196 (77.55%), Postives = 152/196 (77.55%), Query Frame = 0


Query: 1   MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLDVITTEL 60
           MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLD      
Sbjct: 1   MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLD------ 60

Query: 61  TSNRARVIDMDLVHWAVTLLRAANNASADSTPQDANFESDILETRESIVDLTDSNVTDLL 120
                                            DANFESDILETRESIVDLTDSNVTDLL
Sbjct: 61  ---------------------------------DANFESDILETRESIVDLTDSNVTDLL 120

Query: 121 DDDDVDIWMHVRQLSLDDLIRHASFPFGASKSAIQALPDVFPADDFSSSWACAVCMDDEI 180
           DDDDVDIWMHVRQLSLDDLIRHASFPFGASKSAIQALPDVFP DDFSSSWACAVCMDDEI
Sbjct: 121 DDDDVDIWMHVRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMDDEI 157

Query: 181 DAKDGAKQLPCEHIFH 197
           DAKDGAKQLP   I H
Sbjct: 181 DAKDGAKQLPSLRISH 157

[Close]

BLAST of Pay0019733 vs. NCBI nr
Match: XP_042965583.1 (E3 ubiquitin-protein ligase RING1-like [Carya illinoinensis] >KAG2664228.1 hypothetical protein I3760_16G071100 [Carya illinoinensis] >KAG6625099.1 hypothetical protein CIPAW_16G072700 [Carya illinoinensis] >KAG6672623.1 hypothetical protein I3842_16G068000 [Carya illinoinensis] >KAG7941861.1 hypothetical protein I3843_16G069100 [Carya illinoinensis])

HSP 1 Score: 99.4 bits (246), Expect = 4.2e-17
Identity = 47/91 (51.65%), Postives = 68/91 (74.73%), Query Frame = 0


Query: 131 VRQLSLDDLIRHASFPFGASKSAIQALPDVFPADDF--SSSWACAVCMDDEIDAKDGAKQ 190
           ++QL+ +D  R+ + P  ASKSA+QALP++  ++D   S SW CAVC  D  +  + AKQ
Sbjct: 173 IQQLAENDPNRYGTPP--ASKSAVQALPNIKISEDLLASDSWQCAVC-KDTFELGEEAKQ 232

Query: 191 LPCEHIFHTHCIISWLELHNSCPLCRYKLPT 220
           +PC+HI+H+ CI+ WLELHNSCP+CR++LPT
Sbjct: 233 MPCKHIYHSDCILPWLELHNSCPVCRHELPT 260

[Close]

BLAST of Pay0019733 vs. NCBI nr
Match: XP_040998368.1 (LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RING1-like [Juglans microcarpa x Juglans regia])

HSP 1 Score: 99.0 bits (245), Expect = 5.4e-17
Identity = 47/91 (51.65%), Postives = 67/91 (73.63%), Query Frame = 0


Query: 131 VRQLSLDDLIRHASFPFGASKSAIQALPDVFPADDF--SSSWACAVCMDDEIDAKDGAKQ 190
           ++QL+ +D  R+ + P  ASKSA+QALP++  +DD     SW CAVC  D  +  + AKQ
Sbjct: 173 IQQLAENDPNRYGTPP--ASKSAVQALPNIKISDDLLAPDSWQCAVC-KDTFELGEEAKQ 232

Query: 191 LPCEHIFHTHCIISWLELHNSCPLCRYKLPT 220
           +PC+HI+H+ CI+ WLELHNSCP+CR++LPT
Sbjct: 233 MPCKHIYHSDCILPWLELHNSCPVCRHELPT 260

[Close]

BLAST of Pay0019733 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 92.8 bits (229), Expect = 3.6e-19
Identity = 47/91 (51.65%), Postives = 62/91 (68.13%), Query Frame = 0


Query: 131 VRQLSLDDLIRHASFPFGASKSAIQALPDVFPADDF--SSSWACAVCMDDEIDAKDGAKQ 190
           ++QL+ +D  R+ + P  ASKSAI ALP V    D   S    CAVCMD+  D  D  KQ
Sbjct: 175 IQQLAENDPNRYGTPP--ASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSD-VKQ 234

Query: 191 LPCEHIFHTHCIISWLELHNSCPLCRYKLPT 220
           +PC+H+FH  C++ WLELHNSCP+CR++LPT
Sbjct: 235 MPCKHVFHQDCLLPWLELHNSCPVCRFELPT 262

[Close]

BLAST of Pay0019733 vs. TAIR 10
Match: AT4G26400.2 (RING/U-box superfamily protein )

HSP 1 Score: 82.0 bits (201), Expect = 6.4e-16
Identity = 49/141 (34.75%), Postives = 77/141 (54.61%), Query Frame = 0


Query: 80  LRAANNASADSTPQDANFESDILETRESIVDLTDSNVTDLLDDDDVDIWMH--VRQLSLD 139
           +RA   +  +S+ +D   +S +++   S+    ++     + D  V   +   +  L+ +
Sbjct: 153 IRAGIASEYESSDRDLLNQSAVVQGSTSLNQNRNNTSLSAIGDYFVGSSLDHLLEHLADN 212

Query: 140 DLIRHASFPFGASKSAIQALPDVFPADDFSSSWACAVCMDDEIDAKDGAKQLPCEHIFHT 199
           D IRH S P  A K  +  LP V      S S  C++C+DD  D    AK++PC+H FH 
Sbjct: 213 DSIRHGSLP--ARKEVVDNLPTV----KISESLQCSICLDD-FDKGSEAKEMPCKHKFHI 272

Query: 200 HCIISWLELHNSCPLCRYKLP 219
            CI+ WLELH+SCP+CRY+LP
Sbjct: 273 RCIVPWLELHSSCPVCRYELP 286

[Close]

BLAST of Pay0019733 vs. TAIR 10
Match: AT4G26400.1 (RING/U-box superfamily protein )

HSP 1 Score: 82.0 bits (201), Expect = 6.4e-16
Identity = 49/141 (34.75%), Postives = 77/141 (54.61%), Query Frame = 0


Query: 80  LRAANNASADSTPQDANFESDILETRESIVDLTDSNVTDLLDDDDVDIWMH--VRQLSLD 139
           +RA   +  +S+ +D   +S +++   S+    ++     + D  V   +   +  L+ +
Sbjct: 153 IRAGIASEYESSDRDLLNQSAVVQGSTSLNQNRNNTSLSAIGDYFVGSSLDHLLEHLADN 212

Query: 140 DLIRHASFPFGASKSAIQALPDVFPADDFSSSWACAVCMDDEIDAKDGAKQLPCEHIFHT 199
           D IRH S P  A K  +  LP V      S S  C++C+DD  D    AK++PC+H FH 
Sbjct: 213 DSIRHGSLP--ARKEVVDNLPTV----KISESLQCSICLDD-FDKGSEAKEMPCKHKFHI 272

Query: 200 HCIISWLELHNSCPLCRYKLP 219
            CI+ WLELH+SCP+CRY+LP
Sbjct: 273 RCIVPWLELHSSCPVCRYELP 286

[Close]

BLAST of Pay0019733 vs. TAIR 10
Match: AT3G13430.1 (RING/U-box superfamily protein )

HSP 1 Score: 75.9 bits (185), Expect = 4.6e-14
Identity = 41/90 (45.56%), Postives = 60/90 (66.67%), Query Frame = 0


Query: 131 VRQLSLDDLIRHASFPFGASKSAIQALPDVFPADDFSSSWACAVCMDD-EIDAKDGAKQL 190
           +++L+ +DL      P  A+K A++AL  V   D   S   C+VC+DD EI  +  AK++
Sbjct: 188 LQRLAENDLNNRYGTP-PATKEAVEALAMVKIED---SLLQCSVCLDDFEIGME--AKEM 247

Query: 191 PCEHIFHTHCIISWLELHNSCPLCRYKLPT 220
           PC+H FH+ C++ WLELH+SCP+CRY LPT
Sbjct: 248 PCKHKFHSDCLLPWLELHSSCPVCRYLLPT 271

[Close]

BLAST of Pay0019733 vs. TAIR 10
Match: AT3G13430.2 (RING/U-box superfamily protein )

HSP 1 Score: 75.9 bits (185), Expect = 4.6e-14
Identity = 41/90 (45.56%), Postives = 60/90 (66.67%), Query Frame = 0


Query: 131 VRQLSLDDLIRHASFPFGASKSAIQALPDVFPADDFSSSWACAVCMDD-EIDAKDGAKQL 190
           +++L+ +DL      P  A+K A++AL  V   D   S   C+VC+DD EI  +  AK++
Sbjct: 188 LQRLAENDLNNRYGTP-PATKEAVEALAMVKIED---SLLQCSVCLDDFEIGME--AKEM 247

Query: 191 PCEHIFHTHCIISWLELHNSCPLCRYKLPT 220
           PC+H FH+ C++ WLELH+SCP+CRY LPT
Sbjct: 248 PCKHKFHSDCLLPWLELHSSCPVCRYLLPT 271

The following BLAST results are available for this feature:

BLAST of Pay0019733 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LPN7	5.1e-18	51.65	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
P0CH30	1.3e-16	48.35	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q6AVN2	1.2e-14	43.82	E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SI...	[more]
Q94AK4	1.1e-12	47.50	E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV...	[more]
O22283	2.5e-12	47.95	Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]

BLAST of Pay0019733 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BES6	4.5e-118	99.09	ERAD-associated E3 ubiquitin-protein ligase HRD1-like OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0LQL0	1.2e-81	72.89	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G043080 P...	[more]
A0A5D3BH26	2.7e-70	77.55	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A2I4GZI1	5.9e-17	50.55	RING-type E3 ubiquitin transferase OS=Juglans regia OX=51240 GN=LOC109012220 PE=...	[more]
A0A7N2RC25	1.0e-16	51.65	RING-type E3 ubiquitin transferase OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of Pay0019733 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446033.1	9.3e-118	99.09	PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1-like [Cucumis melo]	[more]
KGN64205.1	2.4e-81	72.89	hypothetical protein Csa_014029 [Cucumis sativus]	[more]
TYJ99062.1	5.5e-70	77.55	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_042965583.1	4.2e-17	51.65	E3 ubiquitin-protein ligase RING1-like [Carya illinoinensis] >KAG2664228.1 hypot...	[more]
XP_040998368.1	5.4e-17	51.65	LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RING1-like [Juglans microcarpa ...	[more]

BLAST of Pay0019733 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19950.1	3.6e-19	51.65	RING/U-box superfamily protein	[more]
AT4G26400.2	6.4e-16	34.75	RING/U-box superfamily protein	[more]
AT4G26400.1	6.4e-16	34.75	RING/U-box superfamily protein	[more]
AT3G13430.1	4.6e-14	45.56	RING/U-box superfamily protein	[more]
AT3G13430.2	4.6e-14	45.56	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 172..213 e-value: 1.3E-7 score: 41.3
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 172..214 e-value: 1.4E-11 score: 44.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 172..214 score: 12.533537
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 139..219 e-value: 4.3E-18 score: 66.8
None	No IPR available	PANTHER	PTHR15710:SF127	SUBFAMILY NOT NAMED	coord: 5..219
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 5..219
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 172..214 e-value: 1.19753E-17 score: 71.5641
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 171..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0019733.1	Pay0019733.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity