Pay0019566 (gene) Melon (Payzawat) v1

Overview


Name	Pay0019566
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Eukaryotic translation initiation factor 3 subunit M
Location	chr01: 31207310 .. 31209137 (+)
RNA-Seq Expression	Pay0019566
Synteny	Pay0019566

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTGCTGTAGGGCAACTGGAGAAGGATGCCAAATATTCATTGGTTTATCAGCTTCTGAAGATTTTTTTGACCCAGAGATTGGATGCTTACATGGAATTTCAAGCTGCAAATTCTTCTTTATTGAAAAGCTATGGTAAAATTCTCCACTTTAGTAATAACTTTAATAATTTCTAATTAGAGCTAAATTCTCCACTTTAGTAATAACTTTAATAATTTCTATTGAAAAGCTGCAAATTCCTGGATCTGGTGTAGGTCTCGTCCATGAAGATTGCATTGCAAAGATGAGGTTATTATCATTGGTAGATCTTGGCTCAAATGAATCTGCCCGTATTCCATATGCTCTCATCAAGGGTGTTACTTGTGTGTTACTTGTGCTTCAGATCAATGATGATGAGGTCGAACTGTGGGTCGTGAAGGCCATTACGTCCAAATTGATTGACTGCAAAATGGACCAGATGAACGAAGTTGTGATTGTGAGGTTTGTGCTATTCTCTATCTAGACCGCCACATTACACTTCTTTGGTTAGGCATAGCTTATTCTATACTAATATAATAACTCTTTTGATGTTCATGTTCCTTTACTTTTGTGTTTATTTTATTTGTGATTAAAAACCATTAAAAAGTCTATCAAGCTCGCATCAAAGAAATTGTTGCCTCTGCAGTTCGTGGATTCAATGATGATGTTTTAGATTCATTCATGTGCTAGTAATATTTGGCTTAGTGCTTTACTTTTGAAAACTTAGTTTTGGATATCTGCAGTTAAGAAGATGGTGGTGTATCTGATAGTGTGTACAAATTCCCGGGCGAACTTCGCATGGCTGGAAGGGTTCTTTAGAGTTTCCCATCCTAATCCCCCCAATTTAAGATAACTTGATCATTAACAGGTTTCTTTATTTTCTATCTTAATTTTTTATGGTTGTTCGCATAGGGAGTCTTGGACATCACCACCACAGAGGTCGTAGACTACTTAATTGGAGGTGTCATGACTTGAAGTTGATATTTTTATGGTTCTCTTCCCTTGAACAATATTTTAAATCTCTATGTTTCTCTCATCTCACAGGGTTCTCCTTTCTGCAAACTTGTTCGTGAAGTGCTTGTAGAGTTGGAGTTACCACATTTAGTACGTTGGCAAAGTCTCTTATACCGTTCATTTTCTCAAGGCACACTATTATTAATTACATACACTCACTTATTAATATCGTCTAGGATCTTTGCATATAAATCTTTGTCAATATGGCAATGGCCTTTTACGTGGTGTAAGCAGTAGAAGGAAAAAAGATTACTAAGTGTGAATATTGAGTATTAGTAAAAAAATATAGGCCTATACGAAAATGTTGCCATTTATATCTTATAGATGTACATTATCACTTCTTATATTTTCTTAGTTCACTCTTAAGGCAATCGGACCACATATTCTCAACAGTTTGAGGAATTATATTAAGTTTTTTTGGGATTTTTGAAGTTTGAGGAATTTTCTTAGTTTTTTTGAGGAATTTTCTTAGTTTTTTGAAGTTTAGCATTTGAATTCGCAGGCTTTAAGGAATTGTATTAAGTTTTCTACGAGATTCTGGATTTTCATCTCCACTCTGTTTGGGATTTTTGGATGCTGTCGATTGGGTTTGCGGGATTGTTAGCTACTGGCTTTGCAGATTTGGAGGAATATATATTGGATGGGAGAAGAAGCATTTTCGAGACCTTTAAAATGTCGTGATCTTTGAATTTATATAATTATGTTTGGTTGCAGTTAATTTTACAAGCGTGTTTTCATTGTTGGTGGAATCAGACTTGAATAATATTGGATTTATGTGCTTTAAGATATGAATGA

mRNA sequence

ATGCCTGCTGTAGGGCAACTGGAGAAGGATGCCAAATATTCATTGGTTTATCAGCTTCTGAAGATTTTTTTGACCCAGAGATTGGATGCTTACATGGAATTTCAAGCTGCAAATTCTTCTTTATTGAAAAGCTATGGTCTCGTCCATGAAGATTGCATTGCAAAGATGAGGTTATTATCATTGGTAGATCTTGGCTCAAATGAATCTGCCCGTATTCCATATGCTCTCATCAAGGGTGTTACTTGTGTGTTACTTGTGCTTCAGATCAATGATGATGAGGTCGAACTGTGGGTCGTGAAGGCCATTACGTCCAAATTGATTGACTGCAAAATGGACCAGATGAACGAAGTTGTGATTGTGAGATATGAATGA

Coding sequence (CDS)

ATGCCTGCTGTAGGGCAACTGGAGAAGGATGCCAAATATTCATTGGTTTATCAGCTTCTGAAGATTTTTTTGACCCAGAGATTGGATGCTTACATGGAATTTCAAGCTGCAAATTCTTCTTTATTGAAAAGCTATGGTCTCGTCCATGAAGATTGCATTGCAAAGATGAGGTTATTATCATTGGTAGATCTTGGCTCAAATGAATCTGCCCGTATTCCATATGCTCTCATCAAGGGTGTTACTTGTGTGTTACTTGTGCTTCAGATCAATGATGATGAGGTCGAACTGTGGGTCGTGAAGGCCATTACGTCCAAATTGATTGACTGCAAAATGGACCAGATGAACGAAGTTGTGATTGTGAGATATGAATGA

Protein sequence

MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIVRYE

Homology

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BLAST of Pay0019566 vs. ExPASy Swiss-Prot
Match: Q54KZ8 (Eukaryotic translation initiation factor 3 subunit M OS=Dictyostelium discoideum OX=44689 GN=eif3m PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.3e-20
Identity = 52/122 (42.62%), Postives = 85/122 (69.67%), Query Frame = 0


Query: 1   MPAVGQLEKD--AKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRL 60
           +PAV  LE    +  SL Y+L+KIF T++LD++++FQ  N + L + GL ++DC+ K+RL
Sbjct: 237 LPAVQYLEGSTVSANSLTYELMKIFATEQLDSFLQFQQKNPNFLSTIGLSNDDCLQKIRL 296

Query: 61  LSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVV 120
           LSL  L ++E +++PY+LI        +LQI+++EVE+WV+ A+   L+D K+DQ+N +V
Sbjct: 297 LSLATL-TSEQSKVPYSLIS------KMLQIDENEVEMWVINAMEGDLLDAKLDQLNRIV 351

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BLAST of Pay0019566 vs. ExPASy Swiss-Prot
Match: Q7JVI3 (Eukaryotic translation initiation factor 3 subunit M OS=Drosophila melanogaster OX=7227 GN=eIF3m PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.9e-10
Identity = 37/104 (35.58%), Postives = 61/104 (58.65%), Query Frame = 0


Query: 15  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPY 74
           L++ LL IF++++L AY++F   +   + S GL HE  + KMRLL+ + L  +       
Sbjct: 237 LIHDLLSIFVSEKLPAYVQFYEDHREFVNSQGLNHEQNMKKMRLLTFMQLAESSPEMTFE 296

Query: 75  ALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVV 119
            L K        LQIN+DEVE +V++ + +KL+  ++DQ N+ V
Sbjct: 297 TLTK-------ELQINEDEVEPFVIEVLKTKLVRARLDQANQKV 333

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BLAST of Pay0019566 vs. ExPASy Swiss-Prot
Match: B4HR14 (Eukaryotic translation initiation factor 3 subunit M OS=Drosophila sechellia OX=7238 GN=Tango7 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.9e-10
Identity = 37/104 (35.58%), Postives = 61/104 (58.65%), Query Frame = 0


Query: 15  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPY 74
           L++ LL IF++++L AY++F   +   + S GL HE  + KMRLL+ + L  +       
Sbjct: 237 LIHDLLSIFVSEKLPAYVQFYEDHREFVNSQGLNHEQNMKKMRLLTFMQLAESSPEMTFE 296

Query: 75  ALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVV 119
            L K        LQIN+DEVE +V++ + +KL+  ++DQ N+ V
Sbjct: 297 TLTK-------ELQINEDEVEPFVIEVLKTKLVRARLDQANQKV 333

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BLAST of Pay0019566 vs. ExPASy Swiss-Prot
Match: B4QFD2 (Eukaryotic translation initiation factor 3 subunit M OS=Drosophila simulans OX=7240 GN=Tango7 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.9e-10
Identity = 37/104 (35.58%), Postives = 61/104 (58.65%), Query Frame = 0


Query: 15  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPY 74
           L++ LL IF++++L AY++F   +   + S GL HE  + KMRLL+ + L  +       
Sbjct: 237 LIHDLLSIFVSEKLPAYVQFYEDHREFVNSQGLNHEQNMKKMRLLTFMQLAESSPEMTFE 296

Query: 75  ALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVV 119
            L K        LQIN+DEVE +V++ + +KL+  ++DQ N+ V
Sbjct: 297 TLTK-------ELQINEDEVEPFVIEVLKTKLVRARLDQANQKV 333

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BLAST of Pay0019566 vs. ExPASy Swiss-Prot
Match: B3NRC6 (Eukaryotic translation initiation factor 3 subunit M OS=Drosophila erecta OX=7220 GN=Tango7 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.9e-10
Identity = 37/104 (35.58%), Postives = 60/104 (57.69%), Query Frame = 0


Query: 15  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPY 74
           L++ LL IF++++L AY++F   +   + S GL HE  + KMRLL+ + L  +       
Sbjct: 237 LIHDLLSIFVSEKLPAYVQFYEDHREFVNSQGLNHEQNMKKMRLLTFMQLAESSPEMTFE 296

Query: 75  ALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVV 119
            L K        LQIN+DEVE +V++ + +KL+  ++DQ N  V
Sbjct: 297 TLTK-------ELQINEDEVEPFVIEVLKTKLVRARLDQANHKV 333

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BLAST of Pay0019566 vs. ExPASy TrEMBL
Match: A0A1S4E653 (eukaryotic translation initiation factor 3 subunit M-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504517 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.0e-58
Identity = 121/122 (99.18%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV
Sbjct: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120

Query: 121 RY 123
           R+
Sbjct: 121 RF 122

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BLAST of Pay0019566 vs. ExPASy TrEMBL
Match: A0A5A7UE08 (Eukaryotic translation initiation factor 3 subunit M-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G001100 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.1e-57
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 93  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 152

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV
Sbjct: 153 LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 212

[Close]

BLAST of Pay0019566 vs. ExPASy TrEMBL
Match: A0A1S3CSW1 (eukaryotic translation initiation factor 3 subunit M-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504517 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.1e-57
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV
Sbjct: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120

[Close]

BLAST of Pay0019566 vs. ExPASy TrEMBL
Match: A0A5A7TCS8 (Eukaryotic translation initiation factor 3 subunit M OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G002380 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.6e-51
Identity = 118/140 (84.29%), Postives = 118/140 (84.29%), Query Frame = 0


Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 244 MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 303

Query: 61  LVDLGSNESARIPYALIKGV---------TC-----------VLLVLQINDDEVELWVVK 120
           LVDLGSNESARIPYALIK           TC           VLLVLQINDDEVELWVVK
Sbjct: 304 LVDLGSNESARIPYALIKDTLQVKRNFRFTCFSFCVFFFLMWVLLVLQINDDEVELWVVK 363

[Close]

BLAST of Pay0019566 vs. ExPASy TrEMBL
Match: A0A5D3BNN4 (Eukaryotic translation initiation factor 3 subunit M OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002400 PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.5e-51
Identity = 112/120 (93.33%), Postives = 112/120 (93.33%), Query Frame = 0


Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 244 MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 303

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDLGSNESARIPYALIK        LQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV
Sbjct: 304 LVDLGSNESARIPYALIKD------TLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 357

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BLAST of Pay0019566 vs. NCBI nr
Match: XP_016903699.1 (PREDICTED: eukaryotic translation initiation factor 3 subunit M-like isoform X1 [Cucumis melo])

HSP 1 Score: 235.7 bits (600), Expect = 2.1e-58
Identity = 121/122 (99.18%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV
Sbjct: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120

Query: 121 RY 123
           R+
Sbjct: 121 RF 122

[Close]

BLAST of Pay0019566 vs. NCBI nr
Match: KAA0053298.1 (eukaryotic translation initiation factor 3 subunit M-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 232.3 bits (591), Expect = 2.3e-57
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 93  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 152

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV
Sbjct: 153 LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 212

[Close]

BLAST of Pay0019566 vs. NCBI nr
Match: XP_008467080.1 (PREDICTED: eukaryotic translation initiation factor 3 subunit M-like isoform X2 [Cucumis melo])

HSP 1 Score: 232.3 bits (591), Expect = 2.3e-57
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV
Sbjct: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120

[Close]

BLAST of Pay0019566 vs. NCBI nr
Match: KAA0039431.1 (eukaryotic translation initiation factor 3 subunit M [Cucumis melo var. makuwa])

HSP 1 Score: 211.8 bits (538), Expect = 3.2e-51
Identity = 118/140 (84.29%), Postives = 118/140 (84.29%), Query Frame = 0


Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 244 MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 303

Query: 61  LVDLGSNESARIPYALIKGV---------TC-----------VLLVLQINDDEVELWVVK 120
           LVDLGSNESARIPYALIK           TC           VLLVLQINDDEVELWVVK
Sbjct: 304 LVDLGSNESARIPYALIKDTLQVKRNFRFTCFSFCVFFFLMWVLLVLQINDDEVELWVVK 363

[Close]

BLAST of Pay0019566 vs. NCBI nr
Match: TYK00620.1 (eukaryotic translation initiation factor 3 subunit M [Cucumis melo var. makuwa])

HSP 1 Score: 210.7 bits (535), Expect = 7.2e-51
Identity = 112/120 (93.33%), Postives = 112/120 (93.33%), Query Frame = 0


Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 244 MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 303

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDLGSNESARIPYALIK        LQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV
Sbjct: 304 LVDLGSNESARIPYALIKD------TLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 357

[Close]

BLAST of Pay0019566 vs. TAIR 10
Match: AT5G15610.1 (Proteasome component (PCI) domain protein )

HSP 1 Score: 168.3 bits (425), Expect = 3.8e-42
Identity = 87/120 (72.50%), Postives = 99/120 (82.50%), Query Frame = 0


Query: 2   PAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSL 61
           PAV QLEKD   + VYQLLKIFLTQRLDAYMEFQ ANS  L++YGLV EDC+AKMRLLSL
Sbjct: 245 PAVAQLEKDPNNAPVYQLLKIFLTQRLDAYMEFQNANSGFLQTYGLVEEDCVAKMRLLSL 304

Query: 62  VDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIVR 121
           VDL S++S +IPYA IK        LQ+ND+EVELWVVKAIT+KL+ CKMDQMN+VVIVR
Sbjct: 305 VDLASDDSGKIPYASIKN------TLQVNDEEVELWVVKAITAKLVACKMDQMNQVVIVR 358

[Close]

BLAST of Pay0019566 vs. TAIR 10
Match: AT5G15610.2 (Proteasome component (PCI) domain protein )

HSP 1 Score: 166.4 bits (420), Expect = 1.5e-41
Identity = 86/119 (72.27%), Postives = 98/119 (82.35%), Query Frame = 0


Query: 2   PAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSL 61
           PAV QLEKD   + VYQLLKIFLTQRLDAYMEFQ ANS  L++YGLV EDC+AKMRLLSL
Sbjct: 245 PAVAQLEKDPNNAPVYQLLKIFLTQRLDAYMEFQNANSGFLQTYGLVEEDCVAKMRLLSL 304

Query: 62  VDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 121
           VDL S++S +IPYA IK        LQ+ND+EVELWVVKAIT+KL+ CKMDQMN+VVIV
Sbjct: 305 VDLASDDSGKIPYASIKN------TLQVNDEEVELWVVKAITAKLVACKMDQMNQVVIV 357

[Close]

BLAST of Pay0019566 vs. TAIR 10
Match: AT3G02200.1 (Proteasome component (PCI) domain protein )

HSP 1 Score: 166.0 bits (419), Expect = 1.9e-41
Identity = 84/121 (69.42%), Postives = 100/121 (82.64%), Query Frame = 0


Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           +PAV QLEKDAKY+ VYQLLKIFLTQRL+AY EFQ ANS  L+SYGL +EDC+ KMRLLS
Sbjct: 244 LPAVAQLEKDAKYAPVYQLLKIFLTQRLNAYTEFQNANSGFLQSYGLSNEDCVTKMRLLS 303

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDL S+ES +IPY  IK        LQ+N+ +VELW+VKAIT+KLI+CKMDQMN+V+IV
Sbjct: 304 LVDLASDESGKIPYTSIKD------TLQVNEQDVELWIVKAITAKLIECKMDQMNQVLIV 358

Query: 121 R 122
           R
Sbjct: 364 R 358

[Close]

BLAST of Pay0019566 vs. TAIR 10
Match: AT3G02200.2 (Proteasome component (PCI) domain protein )

HSP 1 Score: 163.7 bits (413), Expect = 9.4e-41
Identity = 83/120 (69.17%), Postives = 99/120 (82.50%), Query Frame = 0


Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           +PAV QLEKDAKY+ VYQLLKIFLTQRL+AY EFQ ANS  L+SYGL +EDC+ KMRLLS
Sbjct: 244 LPAVAQLEKDAKYAPVYQLLKIFLTQRLNAYTEFQNANSGFLQSYGLSNEDCVTKMRLLS 303

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDL S+ES +IPY  IK        LQ+N+ +VELW+VKAIT+KLI+CKMDQMN+V+IV
Sbjct: 304 LVDLASDESGKIPYTSIKD------TLQVNEQDVELWIVKAITAKLIECKMDQMNQVLIV 357

The following BLAST results are available for this feature:

BLAST of Pay0019566 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54KZ8	2.3e-20	42.62	Eukaryotic translation initiation factor 3 subunit M OS=Dictyostelium discoideum...	[more]
Q7JVI3	2.9e-10	35.58	Eukaryotic translation initiation factor 3 subunit M OS=Drosophila melanogaster ...	[more]
B4HR14	2.9e-10	35.58	Eukaryotic translation initiation factor 3 subunit M OS=Drosophila sechellia OX=...	[more]
B4QFD2	2.9e-10	35.58	Eukaryotic translation initiation factor 3 subunit M OS=Drosophila simulans OX=7...	[more]
B3NRC6	4.9e-10	35.58	Eukaryotic translation initiation factor 3 subunit M OS=Drosophila erecta OX=722...	[more]

BLAST of Pay0019566 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E653	1.0e-58	99.18	eukaryotic translation initiation factor 3 subunit M-like isoform X1 OS=Cucumis ...	[more]
A0A5A7UE08	1.1e-57	100.00	Eukaryotic translation initiation factor 3 subunit M-like isoform X2 OS=Cucumis ...	[more]
A0A1S3CSW1	1.1e-57	100.00	eukaryotic translation initiation factor 3 subunit M-like isoform X2 OS=Cucumis ...	[more]
A0A5A7TCS8	1.6e-51	84.29	Eukaryotic translation initiation factor 3 subunit M OS=Cucumis melo var. makuwa...	[more]
A0A5D3BNN4	3.5e-51	93.33	Eukaryotic translation initiation factor 3 subunit M OS=Cucumis melo var. makuwa...	[more]

BLAST of Pay0019566 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016903699.1	2.1e-58	99.18	PREDICTED: eukaryotic translation initiation factor 3 subunit M-like isoform X1 ...	[more]
KAA0053298.1	2.3e-57	100.00	eukaryotic translation initiation factor 3 subunit M-like isoform X2 [Cucumis me...	[more]
XP_008467080.1	2.3e-57	100.00	PREDICTED: eukaryotic translation initiation factor 3 subunit M-like isoform X2 ...	[more]
KAA0039431.1	3.2e-51	84.29	eukaryotic translation initiation factor 3 subunit M [Cucumis melo var. makuwa]	[more]
TYK00620.1	7.2e-51	93.33	eukaryotic translation initiation factor 3 subunit M [Cucumis melo var. makuwa]	[more]

BLAST of Pay0019566 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15610.1	3.8e-42	72.50	Proteasome component (PCI) domain protein	[more]
AT5G15610.2	1.5e-41	72.27	Proteasome component (PCI) domain protein	[more]
AT3G02200.1	1.9e-41	69.42	Proteasome component (PCI) domain protein	[more]
AT3G02200.2	9.4e-41	69.17	Proteasome component (PCI) domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000717	Proteasome component (PCI) domain	PFAM	PF01399	PCI	coord: 17..120 e-value: 1.8E-9 score: 38.0
IPR000717	Proteasome component (PCI) domain	PROSITE	PS50250	PCI	coord: 1..123 score: 14.631458
None	No IPR available	PANTHER	PTHR15350	COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17	coord: 1..120
None	No IPR available	PANTHER	PTHR15350:SF2	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT M	coord: 1..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0019566.1	Pay0019566.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001732	formation of cytoplasmic translation initiation complex
cellular_component	GO:0016282	eukaryotic 43S preinitiation complex
cellular_component	GO:0033290	eukaryotic 48S preinitiation complex
cellular_component	GO:0071541	eukaryotic translation initiation factor 3 complex, eIF3m
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003743	translation initiation factor activity