Pay0019499 (gene) Melon (Payzawat) v1

Overview


Name	Pay0019499
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	LOB domain-containing protein
Location	chr12: 5531982 .. 5533381 (-)
RNA-Seq Expression	Pay0019499
Synteny	Pay0019499

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAATGAAAGAGAAGACGTTGTCGTTTTAATTAGGCCGTTATTGATTGGACCTTTCCCTTTGCCTATTTATGCTTACTTGGTTTGGGTTCCGATCAATTAGTCCCATCTCTCCGCCGGCTAAAATATGAAGAAAAGTGAAGAAGCAAATACGGCGTCGGCGGCGGCGGTGGTGGGTAGTACTCAGCCGTGTGCGGCTTGTAAAATTCTCCGGCGGAGATGCCGAGAGAATTGTGAATTAGGGCCGTATTTTCCTCCAATGGAACCTCTCAAATTCACTATTGCCCATAGAGTCTTTGGTGCTAGCAACATTATCAAGTTGCTTCAGGTAACCTTTTCTTTTCCCAACAAACCTTTCGTTTCTTCTTTTCTTTTCTTTTTTTTATTATTTTTTTTTTCAAAATTAGATGATTTCAAATTCTTATTTTGTTTTATTTTTAATGTAAATAGCACTATAATTTGTGTGTGTTGTGTGTTTATATTTTACCTTCACATTCCTAAAATGCGTTAGCAACTATGAAAAATATATGATTCAATTTAACTCCCTCAACCCTTAGTGCTAAAAAAAGGCTAGAAACTTATTATTTAAATATTATTGTTTTAATGATCATCGTCCGTGGAAAAAACAATTTTTACTAATCCCTAAGAGGAAAAATATGAGAATACATTAAAATCTTAGGAGATATAATCCTTAATCTCGTATTGAATTTGTTAGAATCTTCCGAAATCGCAAAGAGCAGATGCCGTGAACAGCATGGTATATGAAGCAAGTGCAAGAATAAGAGATCCTATTTATGGATGTGCGGGCTCAATTTTCCATCTCCAAAGACAAATAAATGACCTACAAATAGAGTTAGCCAAGGCTCAAGCAGAGGTTCTCAGAATGCATTGTCAACAAGCCAATTTGATGACTCTAATTTGCAAGGAATTGGGTCAAATGCCAGAACCACCCATGCATTATCATCAATCACTTAATGACCATTACAACATTGCTAGCCCTCAAGGTTATTACTCCTATTCATACTTATTTGAGGAGAGTAATGTTTTGGAGCCCCTGTGGACTTGAAATAGTATTTAGTCTAGTTTAGAATCAATGGAATAGATTAGGCTTTGAGATATTACCTTCAAAAATATTTCGTACCCAAATACCCTTTCAAGCTTTGAGATGCTCCAAATAGTGACTCAATACTACTCTCTCGTATATTTGACTTTAGTAGACTCACCGGAATTTTTTTTATACTTCTCATCTAGTTCCTTTAATATTTTTGAACTCCTCTCGATTCTTATCAAATGAATGGAAAAAATAGTCTGAAAATCACAAAGATCAACAATATTTTAGTTGTAAAATAGCCCACAAAGAGTACTGTCAATTTCTATCTAAATCAATAAATTATTCTCAT

mRNA sequence

AAAAAATGAAAGAGAAGACGTTGTCGTTTTAATTAGGCCGTTATTGATTGGACCTTTCCCTTTGCCTATTTATGCTTACTTGGTTTGGGTTCCGATCAATTAGTCCCATCTCTCCGCCGGCTAAAATATGAAGAAAAGTGAAGAAGCAAATACGGCGTCGGCGGCGGCGGTGGTGGGTAGTACTCAGCCGTGTGCGGCTTGTAAAATTCTCCGGCGGAGATGCCGAGAGAATTGTGAATTAGGGCCGTATTTTCCTCCAATGGAACCTCTCAAATTCACTATTGCCCATAGAGTCTTTGGTGCTAGCAACATTATCAAGTTGCTTCAGAATCTTCCGAAATCGCAAAGAGCAGATGCCGTGAACAGCATGGTATATGAAGCAAGTGCAAGAATAAGAGATCCTATTTATGGATGTGCGGGCTCAATTTTCCATCTCCAAAGACAAATAAATGACCTACAAATAGAGTTAGCCAAGGCTCAAGCAGAGGTTCTCAGAATGCATTGTCAACAAGCCAATTTGATGACTCTAATTTGCAAGGAATTGGGTCAAATGCCAGAACCACCCATGCATTATCATCAATCACTTAATGACCATTACAACATTGCTAGCCCTCAAGGTTATTACTCCTATTCATACTTATTTGAGGAGAGTAATGTTTTGGAGCCCCTGTGGACTTGAAATAGTATTTAGTCTAGTTTAGAATCAATGGAATAGATTAGGCTTTGAGATATTACCTTCAAAAATATTTCGTACCCAAATACCCTTTCAAGCTTTGAGATGCTCCAAATAGTGACTCAATACTACTCTCTCGTATATTTGACTTTAGTAGACTCACCGGAATTTTTTTTATACTTCTCATCTAGTTCCTTTAATATTTTTGAACTCCTCTCGATTCTTATCAAATGAATGGAAAAAATAGTCTGAAAATCACAAAGATCAACAATATTTTAGTTGTAAAATAGCCCACAAAGAGTACTGTCAATTTCTATCTAAATCAATAAATTATTCTCAT

Coding sequence (CDS)

ATGAAGAAAAGTGAAGAAGCAAATACGGCGTCGGCGGCGGCGGTGGTGGGTAGTACTCAGCCGTGTGCGGCTTGTAAAATTCTCCGGCGGAGATGCCGAGAGAATTGTGAATTAGGGCCGTATTTTCCTCCAATGGAACCTCTCAAATTCACTATTGCCCATAGAGTCTTTGGTGCTAGCAACATTATCAAGTTGCTTCAGAATCTTCCGAAATCGCAAAGAGCAGATGCCGTGAACAGCATGGTATATGAAGCAAGTGCAAGAATAAGAGATCCTATTTATGGATGTGCGGGCTCAATTTTCCATCTCCAAAGACAAATAAATGACCTACAAATAGAGTTAGCCAAGGCTCAAGCAGAGGTTCTCAGAATGCATTGTCAACAAGCCAATTTGATGACTCTAATTTGCAAGGAATTGGGTCAAATGCCAGAACCACCCATGCATTATCATCAATCACTTAATGACCATTACAACATTGCTAGCCCTCAAGGTTATTACTCCTATTCATACTTATTTGAGGAGAGTAATGTTTTGGAGCCCCTGTGGACTTGA

Protein sequence

MKKSEEANTASAAAVVGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQQANLMTLICKELGQMPEPPMHYHQSLNDHYNIASPQGYYSYSYLFEESNVLEPLWT

Homology

[Close]

BLAST of Pay0019499 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 8.3e-46
Identity = 85/115 (73.91%), Postives = 99/115 (86.09%), Query Frame = 0


Query: 21  PCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQNLPKSQRADAVNS 80
           PCAACKILRRRC E C L PYFPP +P KFTIAHRVFGASNIIK LQ LP+SQR DAVNS
Sbjct: 33  PCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNS 92

Query: 81  MVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQQANLMTLI 136
           MVYEA ARIRDP+YGCAG+I+HLQRQ+++LQ +LAKAQ E++ M  Q++NL+ LI
Sbjct: 93  MVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNMQFQRSNLLELI 147

[Close]

BLAST of Pay0019499 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2)

HSP 1 Score: 178.7 bits (452), Expect = 5.9e-44
Identity = 81/115 (70.43%), Postives = 98/115 (85.22%), Query Frame = 0


Query: 21  PCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQNLPKSQRADAVNS 80
           PCAACKILRRRC + C L PYFPP +P KFTIAHRVFGASNIIK LQ LP+SQR DAVNS
Sbjct: 55  PCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNS 114

Query: 81  MVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQQANLMTLI 136
           MVYEA AR+RDP+YGCAG+I+HLQRQ+++LQ +LAK Q E++ M  Q+++L+ LI
Sbjct: 115 MVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQRSSLLELI 169

[Close]

BLAST of Pay0019499 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.7e-36
Identity = 77/167 (46.11%), Postives = 108/167 (64.67%), Query Frame = 0


Query: 17  GSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQNLPKSQRAD 76
           G+  PCAACK+LRRRC ++C   PYFP  EP KF   HRVFGASN+ K+LQ LP  QR D
Sbjct: 9   GAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGD 68

Query: 77  AVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQQANLMTLIC 136
           AV+SMVYEA+AR+RDP+YGC G+I  LQ+QI+ LQ +LA AQAEV+ +  +Q+       
Sbjct: 69  AVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNF---- 128

Query: 137 KELGQMPEPPMHYHQSLNDHYNIASPQGYYSYSYLFEESNVLEPLWT 184
              G  P+ P       +   +    +G +S+  + +E+++ E +W+
Sbjct: 129 PGHGLCPDSPSSSGSPSSKQVSPQDNKGMFSHMDIVDEASLGESMWS 171

[Close]

BLAST of Pay0019499 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 150.6 bits (379), Expect = 1.7e-35
Identity = 66/109 (60.55%), Postives = 88/109 (80.73%), Query Frame = 0


Query: 19  TQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQNLPKSQRADAV 78
           + PCA+CK+LRRRC ++C   PYFPP +P KF I H+VFGASN+ K+LQ LP  QRADAV
Sbjct: 6   SSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAV 65

Query: 79  NSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQ 128
           NS+V+EA+AR+RDP+YGC G+I +LQ Q++ LQ++LA AQAE+L +  Q
Sbjct: 66  NSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

[Close]

BLAST of Pay0019499 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 140.2 bits (352), Expect = 2.3e-32
Identity = 65/122 (53.28%), Postives = 87/122 (71.31%), Query Frame = 0


Query: 21  PCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQNLPKSQRADAVNS 80
           PCAACK+LRRRC + C   PYF P EP KF   H+VFGASN+ K+L  +P+SQRADA NS
Sbjct: 45  PCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANS 104

Query: 81  MVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQQANLMTLICKELG 140
           +VYEA+ R+RDP+YGC G+I  LQ+Q+  LQ EL   ++E+L+ + Q+  + TLI     
Sbjct: 105 LVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILK-YKQREAVATLIVPSNS 164

Query: 141 QM 143
           Q+
Sbjct: 165 QV 165

[Close]

BLAST of Pay0019499 vs. ExPASy TrEMBL
Match: A0A5D3CLP6 (LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold769G00360 PE=3 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.5e-93
Identity = 174/183 (95.08%), Postives = 175/183 (95.63%), Query Frame = 0


Query: 1   MKKSEEANTASAAAVVGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGAS 60
           MKKSEEANTASA  V+GSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGAS
Sbjct: 1   MKKSEEANTASAVVVMGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGAS 60

Query: 61  NIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAE 120
           NIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAE
Sbjct: 61  NIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAE 120

Query: 121 VLRMHCQQANLMTLICKELGQMPEPPMHYHQSLNDHYNIASPQGYYSYSYLFEESNVLEP 180
           VLRMHCQQANLMTLICKELGQMPEPPMH      DHYNIASPQGYYSYSYLFEESNVLEP
Sbjct: 121 VLRMHCQQANLMTLICKELGQMPEPPMH------DHYNIASPQGYYSYSYLFEESNVLEP 177

Query: 181 LWT 184
           LWT
Sbjct: 181 LWT 177

[Close]

BLAST of Pay0019499 vs. ExPASy TrEMBL
Match: A0A1S3CK31 (LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501684 PE=3 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.5e-93
Identity = 174/183 (95.08%), Postives = 175/183 (95.63%), Query Frame = 0


Query: 1   MKKSEEANTASAAAVVGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGAS 60
           MKKSEEANTASA  V+GSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGAS
Sbjct: 1   MKKSEEANTASAVVVMGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGAS 60

Query: 61  NIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAE 120
           NIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAE
Sbjct: 61  NIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAE 120

Query: 121 VLRMHCQQANLMTLICKELGQMPEPPMHYHQSLNDHYNIASPQGYYSYSYLFEESNVLEP 180
           VLRMHCQQANLMTLICKELGQMPEPPMH      DHYNIASPQGYYSYSYLFEESNVLEP
Sbjct: 121 VLRMHCQQANLMTLICKELGQMPEPPMH------DHYNIASPQGYYSYSYLFEESNVLEP 177

Query: 181 LWT 184
           LWT
Sbjct: 181 LWT 177

[Close]

BLAST of Pay0019499 vs. ExPASy TrEMBL
Match: A0A0A0LUS4 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G088440 PE=3 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 5.9e-87
Identity = 162/183 (88.52%), Postives = 170/183 (92.90%), Query Frame = 0


Query: 1   MKKSEEANTASAAAVVGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGAS 60
           M+KS E NTAS A VVGS+ PCAACKILRRRCRENCELGPYFP MEPLKFTIAHRVFGAS
Sbjct: 1   MEKSAETNTASTAVVVGSSSPCAACKILRRRCRENCELGPYFPSMEPLKFTIAHRVFGAS 60

Query: 61  NIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAE 120
           NIIKLLQ+LP+SQR DAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQ ELAKAQAE
Sbjct: 61  NIIKLLQDLPESQRGDAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQGELAKAQAE 120

Query: 121 VLRMHCQQANLMTLICKELGQMPEPPMHYHQSLNDHYNIASPQGYYSYSYLFEESNVLEP 180
           VLRMHCQQANLMTLI KELGQ+P+PPMH HQSLND YNIASPQ Y+SYSYLFEE NVLEP
Sbjct: 121 VLRMHCQQANLMTLIWKELGQVPQPPMHDHQSLNDPYNIASPQSYHSYSYLFEECNVLEP 180

Query: 181 LWT 184
           +WT
Sbjct: 181 MWT 183

[Close]

BLAST of Pay0019499 vs. ExPASy TrEMBL
Match: A0A6J1DVT7 (LOB domain-containing protein 11-like OS=Momordica charantia OX=3673 GN=LOC111024535 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.2e-60
Identity = 115/164 (70.12%), Postives = 138/164 (84.15%), Query Frame = 0


Query: 21  PCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQNLPKSQRADAVNS 80
           PCAACKILRRRC E C L PYFPP +P KFTIAHRVFGASNIIKLLQ+LP+SQRADAV+S
Sbjct: 38  PCAACKILRRRCAEKCVLAPYFPPSDPFKFTIAHRVFGASNIIKLLQDLPESQRADAVSS 97

Query: 81  MVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQQANLMTLICKELG 140
           +VYEASARIRDP+YGCAG+I  LQ+QIN+LQ ELAK QAE++ MHC QA+L+ LICKEL 
Sbjct: 98  LVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNMHCHQASLVALICKELA 157

Query: 141 QMPEP-PMHYHQSLNDHYNIASPQGYYSYSYLFEESNVLEPLWT 184
           Q P P P   H+SL++++NIA+PQ Y +Y+   E+SN+ EPLWT
Sbjct: 158 QTPPPVPPPDHRSLDNNFNIATPQSYQNYTPFLEDSNIWEPLWT 201

[Close]

BLAST of Pay0019499 vs. ExPASy TrEMBL
Match: A0A5D3CPB0 (LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold769G00420 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.4e-59
Identity = 115/169 (68.05%), Postives = 138/169 (81.66%), Query Frame = 0


Query: 21  PCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQNLPKSQRADAVNS 80
           PCAACKILRRRC E C L PYFPP +PLKFTIAHR+FGASNIIKLL +LP SQRADAV+S
Sbjct: 12  PCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSS 71

Query: 81  MVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQQANLMTLICKELG 140
           +VYEASARIRDP+YGCAG+I  LQ+QIN+LQ ELAK QAE++ +HC Q NL+ LICKEL 
Sbjct: 72  LVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNIHCHQTNLVALICKELA 131

Query: 141 QMPEPPMHY------HQSLNDHYNIASPQGYYSYSYLFEESNVLEPLWT 184
           Q P PPM        H+SL++++NIA+PQ Y  Y+ LFE+SN+ +PLWT
Sbjct: 132 QTP-PPMSSLSLLPDHRSLDNNFNIATPQSYQGYTSLFEDSNIWDPLWT 179

[Close]

BLAST of Pay0019499 vs. NCBI nr
Match: XP_008463578.1 (PREDICTED: LOB domain-containing protein 1-like [Cucumis melo] >KAA0051930.1 LOB domain-containing protein 1-like [Cucumis melo var. makuwa] >TYK12232.1 LOB domain-containing protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 351.3 bits (900), Expect = 5.1e-93
Identity = 174/183 (95.08%), Postives = 175/183 (95.63%), Query Frame = 0


Query: 1   MKKSEEANTASAAAVVGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGAS 60
           MKKSEEANTASA  V+GSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGAS
Sbjct: 1   MKKSEEANTASAVVVMGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGAS 60

Query: 61  NIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAE 120
           NIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAE
Sbjct: 61  NIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAE 120

Query: 121 VLRMHCQQANLMTLICKELGQMPEPPMHYHQSLNDHYNIASPQGYYSYSYLFEESNVLEP 180
           VLRMHCQQANLMTLICKELGQMPEPPMH      DHYNIASPQGYYSYSYLFEESNVLEP
Sbjct: 121 VLRMHCQQANLMTLICKELGQMPEPPMH------DHYNIASPQGYYSYSYLFEESNVLEP 177

Query: 181 LWT 184
           LWT
Sbjct: 181 LWT 177

[Close]

BLAST of Pay0019499 vs. NCBI nr
Match: XP_004147298.1 (LOB domain-containing protein 1 [Cucumis sativus] >KGN64754.1 hypothetical protein Csa_014184 [Cucumis sativus])

HSP 1 Score: 330.1 bits (845), Expect = 1.2e-86
Identity = 162/183 (88.52%), Postives = 170/183 (92.90%), Query Frame = 0


Query: 1   MKKSEEANTASAAAVVGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGAS 60
           M+KS E NTAS A VVGS+ PCAACKILRRRCRENCELGPYFP MEPLKFTIAHRVFGAS
Sbjct: 1   MEKSAETNTASTAVVVGSSSPCAACKILRRRCRENCELGPYFPSMEPLKFTIAHRVFGAS 60

Query: 61  NIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAE 120
           NIIKLLQ+LP+SQR DAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQ ELAKAQAE
Sbjct: 61  NIIKLLQDLPESQRGDAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQGELAKAQAE 120

Query: 121 VLRMHCQQANLMTLICKELGQMPEPPMHYHQSLNDHYNIASPQGYYSYSYLFEESNVLEP 180
           VLRMHCQQANLMTLI KELGQ+P+PPMH HQSLND YNIASPQ Y+SYSYLFEE NVLEP
Sbjct: 121 VLRMHCQQANLMTLIWKELGQVPQPPMHDHQSLNDPYNIASPQSYHSYSYLFEECNVLEP 180

Query: 181 LWT 184
           +WT
Sbjct: 181 MWT 183

[Close]

BLAST of Pay0019499 vs. NCBI nr
Match: XP_038893916.1 (LOB domain-containing protein 1 [Benincasa hispida])

HSP 1 Score: 307.0 bits (785), Expect = 1.1e-79
Identity = 153/183 (83.61%), Postives = 165/183 (90.16%), Query Frame = 0


Query: 1   MKKSEEANTASAAAVVGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGAS 60
           M+KS E NTA+A   V    PCAACKILRRRCRENCELGPYFPP EPLKFTIAHR+FGAS
Sbjct: 1   MEKS-EPNTAAATTAV---SPCAACKILRRRCRENCELGPYFPPTEPLKFTIAHRIFGAS 60

Query: 61  NIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAE 120
           NIIKLLQ+LPKSQR DAVNSMVYEASARIRDPIYGCAGSIF LQRQINDLQ ELAKAQAE
Sbjct: 61  NIIKLLQDLPKSQREDAVNSMVYEASARIRDPIYGCAGSIFQLQRQINDLQGELAKAQAE 120

Query: 121 VLRMHCQQANLMTLICKELGQMPEPPMHYHQSLNDHYNIASPQGYYSYSYLFEESNVLEP 180
           +L+M CQQANLMTLICKEL QMP+PPM+ HQSLND+YNIASPQ Y+S SYLFE+SN+LEP
Sbjct: 121 ILKMQCQQANLMTLICKELAQMPQPPMYDHQSLNDNYNIASPQSYHSSSYLFEDSNILEP 179

Query: 181 LWT 184
           LWT
Sbjct: 181 LWT 179

[Close]

BLAST of Pay0019499 vs. NCBI nr
Match: XP_038895012.1 (LOB domain-containing protein 1-like [Benincasa hispida])

HSP 1 Score: 248.1 bits (632), Expect = 6.1e-62
Identity = 116/165 (70.30%), Postives = 143/165 (86.67%), Query Frame = 0


Query: 21  PCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQNLPKSQRADAVNS 80
           PCAACKILRRRC E C L PYFPP +PLKFTIAHRVFGASNIIKLLQ+LP+SQRADAV+S
Sbjct: 38  PCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSS 97

Query: 81  MVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQQANLMTLICKELG 140
           +VYEA+ARIRDP+YGCAG+I  LQ+QIN+LQ ELAK QAE++ +HC+QANL+ LICKEL 
Sbjct: 98  LVYEANARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNIHCRQANLVALICKELT 157

Query: 141 QMPEP--PMHYHQSLNDHYNIASPQGYYSYSYLFEESNVLEPLWT 184
           Q+P P  P+  H+SL++++NIA+PQ Y  Y+ LFE+SN+ +PLWT
Sbjct: 158 QLPPPMSPLPDHRSLDNNFNIATPQSYQGYTSLFEDSNIWDPLWT 202

[Close]

BLAST of Pay0019499 vs. NCBI nr
Match: XP_022157927.1 (LOB domain-containing protein 11-like [Momordica charantia])

HSP 1 Score: 242.7 bits (618), Expect = 2.5e-60
Identity = 115/164 (70.12%), Postives = 138/164 (84.15%), Query Frame = 0


Query: 21  PCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQNLPKSQRADAVNS 80
           PCAACKILRRRC E C L PYFPP +P KFTIAHRVFGASNIIKLLQ+LP+SQRADAV+S
Sbjct: 38  PCAACKILRRRCAEKCVLAPYFPPSDPFKFTIAHRVFGASNIIKLLQDLPESQRADAVSS 97

Query: 81  MVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQQANLMTLICKELG 140
           +VYEASARIRDP+YGCAG+I  LQ+QIN+LQ ELAK QAE++ MHC QA+L+ LICKEL 
Sbjct: 98  LVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNMHCHQASLVALICKELA 157

Query: 141 QMPEP-PMHYHQSLNDHYNIASPQGYYSYSYLFEESNVLEPLWT 184
           Q P P P   H+SL++++NIA+PQ Y +Y+   E+SN+ EPLWT
Sbjct: 158 QTPPPVPPPDHRSLDNNFNIATPQSYQNYTPFLEDSNIWEPLWT 201

[Close]

BLAST of Pay0019499 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 )

HSP 1 Score: 184.9 bits (468), Expect = 5.9e-47
Identity = 85/115 (73.91%), Postives = 99/115 (86.09%), Query Frame = 0


Query: 21  PCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQNLPKSQRADAVNS 80
           PCAACKILRRRC E C L PYFPP +P KFTIAHRVFGASNIIK LQ LP+SQR DAVNS
Sbjct: 33  PCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNS 92

Query: 81  MVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQQANLMTLI 136
           MVYEA ARIRDP+YGCAG+I+HLQRQ+++LQ +LAKAQ E++ M  Q++NL+ LI
Sbjct: 93  MVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNMQFQRSNLLELI 147

[Close]

BLAST of Pay0019499 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 )

HSP 1 Score: 178.7 bits (452), Expect = 4.2e-45
Identity = 81/115 (70.43%), Postives = 98/115 (85.22%), Query Frame = 0


Query: 21  PCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQNLPKSQRADAVNS 80
           PCAACKILRRRC + C L PYFPP +P KFTIAHRVFGASNIIK LQ LP+SQR DAVNS
Sbjct: 55  PCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNS 114

Query: 81  MVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQQANLMTLI 136
           MVYEA AR+RDP+YGCAG+I+HLQRQ+++LQ +LAK Q E++ M  Q+++L+ LI
Sbjct: 115 MVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQRSSLLELI 169

[Close]

BLAST of Pay0019499 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 153.3 bits (386), Expect = 1.9e-37
Identity = 77/167 (46.11%), Postives = 108/167 (64.67%), Query Frame = 0


Query: 17  GSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQNLPKSQRAD 76
           G+  PCAACK+LRRRC ++C   PYFP  EP KF   HRVFGASN+ K+LQ LP  QR D
Sbjct: 9   GAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGD 68

Query: 77  AVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQQANLMTLIC 136
           AV+SMVYEA+AR+RDP+YGC G+I  LQ+QI+ LQ +LA AQAEV+ +  +Q+       
Sbjct: 69  AVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNF---- 128

Query: 137 KELGQMPEPPMHYHQSLNDHYNIASPQGYYSYSYLFEESNVLEPLWT 184
              G  P+ P       +   +    +G +S+  + +E+++ E +W+
Sbjct: 129 PGHGLCPDSPSSSGSPSSKQVSPQDNKGMFSHMDIVDEASLGESMWS 171

[Close]

BLAST of Pay0019499 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 150.6 bits (379), Expect = 1.2e-36
Identity = 66/109 (60.55%), Postives = 88/109 (80.73%), Query Frame = 0


Query: 19  TQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQNLPKSQRADAV 78
           + PCA+CK+LRRRC ++C   PYFPP +P KF I H+VFGASN+ K+LQ LP  QRADAV
Sbjct: 6   SSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAV 65

Query: 79  NSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQ 128
           NS+V+EA+AR+RDP+YGC G+I +LQ Q++ LQ++LA AQAE+L +  Q
Sbjct: 66  NSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

[Close]

BLAST of Pay0019499 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 140.2 bits (352), Expect = 1.7e-33
Identity = 65/122 (53.28%), Postives = 87/122 (71.31%), Query Frame = 0


Query: 21  PCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQNLPKSQRADAVNS 80
           PCAACK+LRRRC + C   PYF P EP KF   H+VFGASN+ K+L  +P+SQRADA NS
Sbjct: 45  PCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANS 104

Query: 81  MVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQQANLMTLICKELG 140
           +VYEA+ R+RDP+YGC G+I  LQ+Q+  LQ EL   ++E+L+ + Q+  + TLI     
Sbjct: 105 LVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILK-YKQREAVATLIVPSNS 164

Query: 141 QM 143
           Q+
Sbjct: 165 QV 165

The following BLAST results are available for this feature:

BLAST of Pay0019499 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQR0	8.3e-46	73.91	LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=...	[more]
Q9SK08	5.9e-44	70.43	LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 S...	[more]
Q9SHE9	2.7e-36	46.11	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q8LBW3	1.7e-35	60.55	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q8L5T5	2.3e-32	53.28	LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S...	[more]

BLAST of Pay0019499 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CLP6	2.5e-93	95.08	LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3CK31	2.5e-93	95.08	LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501684 PE=...	[more]
A0A0A0LUS4	5.9e-87	88.52	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G088440 PE=3 SV...	[more]
A0A6J1DVT7	1.2e-60	70.12	LOB domain-containing protein 11-like OS=Momordica charantia OX=3673 GN=LOC11102...	[more]
A0A5D3CPB0	1.4e-59	68.05	LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of Pay0019499 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463578.1	5.1e-93	95.08	PREDICTED: LOB domain-containing protein 1-like [Cucumis melo] >KAA0051930.1 LOB...	[more]
XP_004147298.1	1.2e-86	88.52	LOB domain-containing protein 1 [Cucumis sativus] >KGN64754.1 hypothetical prote...	[more]
XP_038893916.1	1.1e-79	83.61	LOB domain-containing protein 1 [Benincasa hispida]	[more]
XP_038895012.1	6.1e-62	70.30	LOB domain-containing protein 1-like [Benincasa hispida]	[more]
XP_022157927.1	2.5e-60	70.12	LOB domain-containing protein 11-like [Momordica charantia]	[more]

BLAST of Pay0019499 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07900.1	5.9e-47	73.91	LOB domain-containing protein 1	[more]
AT2G28500.1	4.2e-45	70.43	LOB domain-containing protein 11	[more]
AT1G31320.1	1.9e-37	46.11	LOB domain-containing protein 4	[more]
AT2G30130.1	1.2e-36	60.55	Lateral organ boundaries (LOB) domain family protein	[more]
AT2G40470.1	1.7e-33	53.28	LOB domain-containing protein 15	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 100..127
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 19..182
None	No IPR available	PANTHER	PTHR31301:SF137	LOB DOMAIN-CONTAINING PROTEIN 1	coord: 19..182
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 21..118 e-value: 2.1E-38 score: 130.8
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 20..121 score: 25.179941

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0019499.1	Pay0019499.1	mRNA