Pay0019459 (gene) Melon (Payzawat) v1

Overview


Name	Pay0019459
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Type 1 membrane protein, putative isoform 1
Location	chr05: 7025187 .. 7026801 (+)
RNA-Seq Expression	Pay0019459
Synteny	Pay0019459

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGCTCAACAAGATGGAAAAAAGATCAAGGTTCCACTTAATTCAAGGTTTGTACTATTTTTTGTATTTTTGTTTAGGTTGTGGAATCCAAGTTTGTATTTGAAGTCAAGTTCATCCAAGGTCATTGAGTTTCAAACTTCTTTTAAGTAAATTTGTGTTTCTTGAACTAGAATTCTATGTCAATTGCTTGTTTTTTGTTTTTTTTCTCAAACTTTACGTATATCTGCAACTGTAAGGTTTTGATCATGTTATTAATGCCTTTTGCAGCTGAATGGGATTTTCATACCAAATCCGCTTGATAGGCCTCGTTCAGTTTTATGCTTGAAACTAAAGGAGAATTTGGTCTGTGTAGTAAATGAAATTGAAAATTGTATTGTTGTCTATGCTATGAAAGTTCCAGTTCTCTAGTATAAAGTTACAAGACCATGTATATATTTTCGTCATTGATTCAGGATGCTATATATTTTCTGTTTTTTAGAGTTCAGACGAGCATATTAATCAGGATATAGGTGTCACAACATGTTTGTAAATCGAAATTGGAACCTGCATAGGCTGCATTAATCTTTATGATGTCTAAACCAGCTGAAGCAAAGAAATGGAGAATTGCAGAAGCTTTCATAGGAAGTCTAATAATATGGTATACCATATACAAGTGACATCTTTCTAGTTTTAGAAATTCCTGATATTTACATAGCCAGCCATTAATAATACAAATAACGTTAACCGACCATTCAGTAATCTGCTACATTTCACTTTTGCATCACAGACTAATTTAAAAGAAAAATCTGGGATTGAAATGTCAGTGGTGTTGTGCTTAACCTTACTGACCTTTCCTACTATAAAGCAGTCAAGATTTCTATTTCCTGCAAGAATTGATTCTGCGTAAAAGGCAGCATCTAAAATTTCGTCATAGTTAATGATCAAGCTGTGACTATGCAATATTCTGTCGTTGTATTATATATTGTTTTTTTATGTGATATTTGCAGTTTCTAAAATAATCATTATTGGTTTGATTTCCTCCCAGATATTTTCAGTTGCCCTCTGGCCTTTCTAATCCTTGTTATTAGCAGGCGAGGATGAAGTTTCTGTTGTTCCTTTGAATGAACCATTGTCTGATTTTACTGATGAAGATATTAGAGAGTTTGTAAGTCGTGAATCAAGACTTTAATTGTATTACTAGATGCCTATATTTTTACATATTCATCGACAAGTTCTAATTTCTTTTTAATCTCTATCTAGGCATCTTTCATTGGTGGATCATATGTTGCCGATGCTTCAAAAACTTTAAATGGAGAGTTTACTGTGACTGATGCTGTTAAGATCAATCTTCCTCTGTCTAAGGTTTTACTTGATCTATTTCAGATGCTATCTGGTTTTATTCTATAACCATCTCTGTTAATGTGTTCATTAGTTTTCAGTTAGCATGTTTGGTAGACTTTAAGACGTTAGATCGAGATATTCGTTGAGCCTTCTGTCTGATTGATCTGCATATGATGACTATTTGTAGGACTTGAAGAATGCAAAGGCGATTGTTGATTGGATAGATTGGGCAGAGCCACAGTATGACTTTAATCCCATTATTGATGAATGGTGCCAAGAAGCTCCCGAATAA

mRNA sequence

ATGGGTGCTCAACAAGATGGAAAAAAGATCAAGCTGAATGGGATTTTCATACCAAATCCGCTTGATAGGCCTCGTTCAGTTTTATGCTTGAAACTAAAGGAGAATTTGAGTTCAGACGAGCATATTAATCAGGATATAGGCGAGGATGAAGTTTCTGTTGTTCCTTTGAATGAACCATTGTCTGATTTTACTGATGAAGATATTAGAGAGTTTGCATCTTTCATTGGTGGATCATATGTTGCCGATGCTTCAAAAACTTTAAATGGAGAGTTTACTGTGACTGATGCTGTTAAGATCAATCTTCCTCTGTCTAAGGACTTGAAGAATGCAAAGGCGATTGTTGATTGGATAGATTGGGCAGAGCCACAGTATGACTTTAATCCCATTATTGATGAATGGTGCCAAGAAGCTCCCGAATAA

Coding sequence (CDS)

ATGGGTGCTCAACAAGATGGAAAAAAGATCAAGCTGAATGGGATTTTCATACCAAATCCGCTTGATAGGCCTCGTTCAGTTTTATGCTTGAAACTAAAGGAGAATTTGAGTTCAGACGAGCATATTAATCAGGATATAGGCGAGGATGAAGTTTCTGTTGTTCCTTTGAATGAACCATTGTCTGATTTTACTGATGAAGATATTAGAGAGTTTGCATCTTTCATTGGTGGATCATATGTTGCCGATGCTTCAAAAACTTTAAATGGAGAGTTTACTGTGACTGATGCTGTTAAGATCAATCTTCCTCTGTCTAAGGACTTGAAGAATGCAAAGGCGATTGTTGATTGGATAGATTGGGCAGAGCCACAGTATGACTTTAATCCCATTATTGATGAATGGTGCCAAGAAGCTCCCGAATAA

Protein sequence

MGAQQDGKKIKLNGIFIPNPLDRPRSVLCLKLKENLSSDEHINQDIGEDEVSVVPLNEPLSDFTDEDIREFASFIGGSYVADASKTLNGEFTVTDAVKINLPLSKDLKNAKAIVDWIDWAEPQYDFNPIIDEWCQEAPE

Homology

[Close]

BLAST of Pay0019459 vs. ExPASy TrEMBL
Match: A0A1S3AW68 (uncharacterized protein LOC103483489 OS=Cucumis melo OX=3656 GN=LOC103483489 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 3.2e-29
Identity = 76/117 (64.96%), Postives = 84/117 (71.79%), Query Frame = 0


Query: 11  KLNGIFIPNPLDRPRSVLCLKLKEN----------------LSSDEHINQDI------GE 70
           KLNGI +PNPLDRPRSV  L++K                  L+S  H+  +       GE
Sbjct: 80  KLNGILMPNPLDRPRSVFMLEIKGECDPEIVSLETGMSSNVLTSKVHVGSESADILLPGE 139

Query: 71  DEVSVVPLNEPLSDFTDEDIREFASFIGGSYVADASKTLNGEFTVTDAVKINLPLSK 106
           DEVS+VPLNEPLSDFTDEDIREFASFIGG+YVADASKTLNGEFTVTDAVKINL LSK
Sbjct: 140 DEVSIVPLNEPLSDFTDEDIREFASFIGGAYVADASKTLNGEFTVTDAVKINLHLSK 196

[Close]

BLAST of Pay0019459 vs. ExPASy TrEMBL
Match: A0A5D3D0P7 (Type 1 membrane protein, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002620 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 9.4e-29
Identity = 75/117 (64.10%), Postives = 83/117 (70.94%), Query Frame = 0


Query: 11  KLNGIFIPNPLDRPRSVLCLKLKEN----------------LSSDEHINQDI------GE 70
           KLNGI +PNPLDRPRSV  L++K                  L+S  H+  +       GE
Sbjct: 104 KLNGILMPNPLDRPRSVFMLEIKGEYDPEIVSLETGMSSNVLTSKVHVGSESADILLPGE 163

Query: 71  DEVSVVPLNEPLSDFTDEDIREFASFIGGSYVADASKTLNGEFTVTDAVKINLPLSK 106
           DEVS+VPLNEPLSDFTDED REFASFIGG+YVADASKTLNGEFTVTDAVKINL LSK
Sbjct: 164 DEVSIVPLNEPLSDFTDEDFREFASFIGGAYVADASKTLNGEFTVTDAVKINLHLSK 220

[Close]

BLAST of Pay0019459 vs. ExPASy TrEMBL
Match: A0A5A7U1Q8 (Type 1 membrane protein, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G003930 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 9.4e-29
Identity = 75/118 (63.56%), Postives = 83/118 (70.34%), Query Frame = 0


Query: 11  KLNGIFIPNPLDRPRSVLCLKLKEN----------------LSSDEHINQD-------IG 70
           KLNGI +PNPLDRPRSV  L++K                  L+S  H+  +        G
Sbjct: 80  KLNGILMPNPLDRPRSVFMLEIKGEYDPEIVSLETGMSSNVLTSKVHVGSESADILLPAG 139

Query: 71  EDEVSVVPLNEPLSDFTDEDIREFASFIGGSYVADASKTLNGEFTVTDAVKINLPLSK 106
           EDEVS+VPLNEPLSDFTDED REFASFIGG+YVADASKTLNGEFTVTDAVKINL LSK
Sbjct: 140 EDEVSIVPLNEPLSDFTDEDFREFASFIGGAYVADASKTLNGEFTVTDAVKINLHLSK 197

[Close]

BLAST of Pay0019459 vs. ExPASy TrEMBL
Match: A0A0A0L9G0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G131990 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 9.4e-29
Identity = 79/117 (67.52%), Postives = 84/117 (71.79%), Query Frame = 0


Query: 11  KLNGIFIPNPLDRPRSVLCLKLKEN----------------LSSDEHI---NQDI---GE 70
           KLNGI +PNPLDRPRSV  L++K                  L S  H+   + DI   GE
Sbjct: 137 KLNGILMPNPLDRPRSVFMLEIKGEYDPEIVSLGTGMSSNVLMSKVHVGPESADILLPGE 196

Query: 71  DEVSVVPLNEPLSDFTDEDIREFASFIGGSYVADASKTLNGEFTVTDAVKINLPLSK 106
           DEVSVVPLNEPLSDFTDEDIREFASFIGGSYVADASKTLNGEFTV DAVKINL LSK
Sbjct: 197 DEVSVVPLNEPLSDFTDEDIREFASFIGGSYVADASKTLNGEFTVADAVKINLHLSK 253

[Close]

BLAST of Pay0019459 vs. ExPASy TrEMBL
Match: A0A6J1CZX7 (uncharacterized protein LOC111016092 OS=Momordica charantia OX=3673 GN=LOC111016092 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 2.8e-25
Identity = 71/119 (59.66%), Postives = 82/119 (68.91%), Query Frame = 0


Query: 11  KLNGIFIPNPLDRPRSVLCLKLKEN----------------LSSDEHINQDIG------E 70
           KLNGI +PNPLDRPR+VL L++K                  L+S  H+  +        E
Sbjct: 80  KLNGILMPNPLDRPRAVLMLEIKGEYGPEIVNLKSGISSNVLTSKVHVGSESADIQLPDE 139

Query: 71  DEVSVVPLNEPLSDFTDEDIREFASFIGGSYVADASKTLNGEFTV--TDAVKINLPLSK 106
           DEVSVVPLNEPL+D+TDEDIREFASFIGGSY+AD SKTLNGE TV  TDA+KINL LSK
Sbjct: 140 DEVSVVPLNEPLTDYTDEDIREFASFIGGSYIADESKTLNGELTVPLTDAIKINLYLSK 198

[Close]

BLAST of Pay0019459 vs. NCBI nr
Match: XP_008438371.1 (PREDICTED: uncharacterized protein LOC103483489 [Cucumis melo])

HSP 1 Score: 137.9 bits (346), Expect = 6.7e-29
Identity = 76/117 (64.96%), Postives = 84/117 (71.79%), Query Frame = 0


Query: 11  KLNGIFIPNPLDRPRSVLCLKLKEN----------------LSSDEHINQDI------GE 70
           KLNGI +PNPLDRPRSV  L++K                  L+S  H+  +       GE
Sbjct: 80  KLNGILMPNPLDRPRSVFMLEIKGECDPEIVSLETGMSSNVLTSKVHVGSESADILLPGE 139

Query: 71  DEVSVVPLNEPLSDFTDEDIREFASFIGGSYVADASKTLNGEFTVTDAVKINLPLSK 106
           DEVS+VPLNEPLSDFTDEDIREFASFIGG+YVADASKTLNGEFTVTDAVKINL LSK
Sbjct: 140 DEVSIVPLNEPLSDFTDEDIREFASFIGGAYVADASKTLNGEFTVTDAVKINLHLSK 196

[Close]

BLAST of Pay0019459 vs. NCBI nr
Match: KAA0049158.1 (Type 1 membrane protein, putative isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 136.3 bits (342), Expect = 2.0e-28
Identity = 75/118 (63.56%), Postives = 83/118 (70.34%), Query Frame = 0


Query: 11  KLNGIFIPNPLDRPRSVLCLKLKEN----------------LSSDEHINQD-------IG 70
           KLNGI +PNPLDRPRSV  L++K                  L+S  H+  +        G
Sbjct: 80  KLNGILMPNPLDRPRSVFMLEIKGEYDPEIVSLETGMSSNVLTSKVHVGSESADILLPAG 139

Query: 71  EDEVSVVPLNEPLSDFTDEDIREFASFIGGSYVADASKTLNGEFTVTDAVKINLPLSK 106
           EDEVS+VPLNEPLSDFTDED REFASFIGG+YVADASKTLNGEFTVTDAVKINL LSK
Sbjct: 140 EDEVSIVPLNEPLSDFTDEDFREFASFIGGAYVADASKTLNGEFTVTDAVKINLHLSK 197

[Close]

BLAST of Pay0019459 vs. NCBI nr
Match: KGN56775.2 (hypothetical protein Csa_011673 [Cucumis sativus])

HSP 1 Score: 136.3 bits (342), Expect = 2.0e-28
Identity = 79/117 (67.52%), Postives = 84/117 (71.79%), Query Frame = 0


Query: 11  KLNGIFIPNPLDRPRSVLCLKLKEN----------------LSSDEHI---NQDI---GE 70
           KLNGI +PNPLDRPRSV  L++K                  L S  H+   + DI   GE
Sbjct: 128 KLNGILMPNPLDRPRSVFMLEIKGEYDPEIVSLGTGMSSNVLMSKVHVGPESADILLPGE 187

Query: 71  DEVSVVPLNEPLSDFTDEDIREFASFIGGSYVADASKTLNGEFTVTDAVKINLPLSK 106
           DEVSVVPLNEPLSDFTDEDIREFASFIGGSYVADASKTLNGEFTV DAVKINL LSK
Sbjct: 188 DEVSVVPLNEPLSDFTDEDIREFASFIGGSYVADASKTLNGEFTVADAVKINLHLSK 244

[Close]

BLAST of Pay0019459 vs. NCBI nr
Match: XP_004134002.1 (uncharacterized protein LOC101215254 [Cucumis sativus])

HSP 1 Score: 136.3 bits (342), Expect = 2.0e-28
Identity = 79/117 (67.52%), Postives = 84/117 (71.79%), Query Frame = 0


Query: 11  KLNGIFIPNPLDRPRSVLCLKLKEN----------------LSSDEHI---NQDI---GE 70
           KLNGI +PNPLDRPRSV  L++K                  L S  H+   + DI   GE
Sbjct: 104 KLNGILMPNPLDRPRSVFMLEIKGEYDPEIVSLGTGMSSNVLMSKVHVGPESADILLPGE 163

Query: 71  DEVSVVPLNEPLSDFTDEDIREFASFIGGSYVADASKTLNGEFTVTDAVKINLPLSK 106
           DEVSVVPLNEPLSDFTDEDIREFASFIGGSYVADASKTLNGEFTV DAVKINL LSK
Sbjct: 164 DEVSVVPLNEPLSDFTDEDIREFASFIGGSYVADASKTLNGEFTVADAVKINLHLSK 220

[Close]

BLAST of Pay0019459 vs. NCBI nr
Match: TYK17402.1 (Type 1 membrane protein, putative isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 136.3 bits (342), Expect = 2.0e-28
Identity = 75/117 (64.10%), Postives = 83/117 (70.94%), Query Frame = 0


Query: 11  KLNGIFIPNPLDRPRSVLCLKLKEN----------------LSSDEHINQDI------GE 70
           KLNGI +PNPLDRPRSV  L++K                  L+S  H+  +       GE
Sbjct: 104 KLNGILMPNPLDRPRSVFMLEIKGEYDPEIVSLETGMSSNVLTSKVHVGSESADILLPGE 163

Query: 71  DEVSVVPLNEPLSDFTDEDIREFASFIGGSYVADASKTLNGEFTVTDAVKINLPLSK 106
           DEVS+VPLNEPLSDFTDED REFASFIGG+YVADASKTLNGEFTVTDAVKINL LSK
Sbjct: 164 DEVSIVPLNEPLSDFTDEDFREFASFIGGAYVADASKTLNGEFTVTDAVKINLHLSK 220

[Close]

BLAST of Pay0019459 vs. TAIR 10
Match: AT5G24810.1 (ABC1 family protein )

HSP 1 Score: 70.9 bits (172), Expect = 9.4e-13
Identity = 28/34 (82.35%), Postives = 33/34 (97.06%), Query Frame = 0


Query: 105 KDLKNAKAIVDWIDWAEPQYDFNPIIDEWCQEAP 139
           +DLKNAK+IVDWI WAEPQY+FNP+IDEWC+EAP
Sbjct: 207 EDLKNAKSIVDWIAWAEPQYNFNPMIDEWCKEAP 240

[Close]

BLAST of Pay0019459 vs. TAIR 10
Match: AT5G24810.2 (ABC1 family protein )

HSP 1 Score: 70.9 bits (172), Expect = 9.4e-13
Identity = 28/34 (82.35%), Postives = 33/34 (97.06%), Query Frame = 0


Query: 105 KDLKNAKAIVDWIDWAEPQYDFNPIIDEWCQEAP 139
           +DLKNAK+IVDWI WAEPQY+FNP+IDEWC+EAP
Sbjct: 238 EDLKNAKSIVDWIAWAEPQYNFNPMIDEWCKEAP 271

[Close]

BLAST of Pay0019459 vs. TAIR 10
Match: AT3G24160.1 (putative type 1 membrane protein )

HSP 1 Score: 63.2 bits (152), Expect = 2.0e-10
Identity = 36/95 (37.89%), Postives = 54/95 (56.84%), Query Frame = 0


Query: 11  KLNGIFIPNPLDRPRSVLCLK---------------------LKENLSSDEH-INQDIGE 70
           KLN I  PNP +RPR+   L+                     ++ ++ SD +  + ++ +
Sbjct: 75  KLNKILKPNPFERPRAAFVLEIAGADDMLLETSPSHSFLGNAIRSSIKSDSYKADTELPD 134

Query: 71  DEVSVVPLNEPLSDFTDEDIREFASFIGGSYVADA 84
           +EV VV +NEP SD TD+DI +FAS++GGSYVA A
Sbjct: 135 NEVVVVSVNEPSSDVTDKDINDFASWLGGSYVAGA 169

The following BLAST results are available for this feature:

BLAST of Pay0019459 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0019459 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AW68	3.2e-29	64.96	uncharacterized protein LOC103483489 OS=Cucumis melo OX=3656 GN=LOC103483489 PE=...	[more]
A0A5D3D0P7	9.4e-29	64.10	Type 1 membrane protein, putative isoform 1 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5A7U1Q8	9.4e-29	63.56	Type 1 membrane protein, putative isoform 1 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0L9G0	9.4e-29	67.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G131990 PE=4 SV=1	[more]
A0A6J1CZX7	2.8e-25	59.66	uncharacterized protein LOC111016092 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]

BLAST of Pay0019459 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008438371.1	6.7e-29	64.96	PREDICTED: uncharacterized protein LOC103483489 [Cucumis melo]	[more]
KAA0049158.1	2.0e-28	63.56	Type 1 membrane protein, putative isoform 1 [Cucumis melo var. makuwa]	[more]
KGN56775.2	2.0e-28	67.52	hypothetical protein Csa_011673 [Cucumis sativus]	[more]
XP_004134002.1	2.0e-28	67.52	uncharacterized protein LOC101215254 [Cucumis sativus]	[more]
TYK17402.1	2.0e-28	64.10	Type 1 membrane protein, putative isoform 1 [Cucumis melo var. makuwa]	[more]

BLAST of Pay0019459 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24810.1	9.4e-13	82.35	ABC1 family protein	[more]
AT5G24810.2	9.4e-13	82.35	ABC1 family protein	[more]
AT3G24160.1	2.0e-10	37.89	putative type 1 membrane protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37735	OS08G0567000 PROTEIN	coord: 11..108
None	No IPR available	PANTHER	PTHR37735:SF1	OS08G0567000 PROTEIN	coord: 11..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0019459.1	Pay0019459.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane