Pay0019253 (gene) Melon (Payzawat) v1

Overview
NamePay0019253
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase
Locationchr05: 10230770 .. 10231679 (-)
RNA-Seq ExpressionPay0019253
SyntenyPay0019253
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCATTTGGTCTTTGTAATGCACTGGGCACATTCCAACGTTGCATGATGAGCATATTTTCCGACTTTATTGAAAAATGCATTGAAGTTTTCATGGATGATTTCACAGTTTATGGTGATAGTTTTGATGCATGTTTAACCAGTCTAGAATTAATTCCAAATAGATGAATAGAAACTAACCTTGTCTTGAATTATGAAAAGTGTCATTTCATGGTGTCTCATGGTATAGTTTTAGGACACTTAGTGTCTTCAAAAGGAATAGAGGTAGATAAAACAAATATTGACGTTATACAAAAATTTTCATATCCAACATGTTTAAAAGATGTTAGATCCTTCCTTGGTAGTGCCAGCTTTTATAGACGGTTTATAAAAGAATTTTCTAAAATTGCTTTGCCTCTAACTAATCTCTTGCAAAAAGATGTACCATTTCTGATTGATGACAATTGTAAGAAGGCATTTGATGATCTCAAACAAATGTTAGTCTCTACCTCTATCCTTCAATCTTCTAATTAGAATTTACCTTTCGAAATAATGTGTGATGCAAGCAACTTAGCATTAGGAGCTGTTTTAGGACAAAGGATATATAAAAAATTGCATGCTATATACTATGCATCTAGGACCCTTAACCAAGCACAATCTAACTACACCACAACTGAAAAAGAATTTCTTGCTATAGTTTTTGCTTTAGATAAGTTTAGTAGCTACATTGTTGGCTCCCCAGAAATTGTTTACACTGATCATGCAGCGGTTAGGTACCTTGTATAAAAAAAAATCAAAACCAAGGCTTGTTCGATGGATTTTACTTTTGCAAGAATTCAACCTAACCATCAAGGATAGAAAAGGAGCCAACAATTCTGTAGCCGACCATCTTAGTCGAATTGTACAAAAGCAAGAAAGTATGCCAATTTGA

mRNA sequence

ATGCCATTTGGTCTTTGTAATGCACTGGGCACATTCCAACGTTGCATGATGAGCATATTTTCCGACTTTATTGAAAAATGCATTGAAGTTTTCATGGATGATTTCACAGTTTATGGTGATAGTTTTGATGCATATGTTAGATCCTTCCTTGGTAGTGCCAGCTTTTATAGACGGTTTATAAAAGAATTTTCTAAAATTGCTTTGCCTCTAACTAATCTCTTGCAAAAAGATGTACCATTTCTGATTGATGACAATTGTAAGAAGGCATTTGATGATCTCAAACAAATGTTAAATTTACCTTTCGAAATAATGTGTGATGCAAGCAACTTAGCATTAGGAGCTGTTTTAGGACAAAGGATATATAAAAAATTGCATGCTATATACTATGCATCTAGGACCCTTAACCAAGCACAATCTAACTACACCACAACTGAAAAAGAATTTCTTGCTATAGTTTTTGCTTTAGATAAGTTTAGTAGCTACATTGTTGGCTCCCCAGAAATTGTTTACACTGATCATGCAGCGGTTAGGCTTGTTCGATGGATTTTACTTTTGCAAGAATTCAACCTAACCATCAAGGATAGAAAAGGAGCCAACAATTCTGTAGCCGACCATCTTAGTCGAATTGTACAAAAGCAAGAAAGTATGCCAATTTGA

Coding sequence (CDS)

ATGCCATTTGGTCTTTGTAATGCACTGGGCACATTCCAACGTTGCATGATGAGCATATTTTCCGACTTTATTGAAAAATGCATTGAAGTTTTCATGGATGATTTCACAGTTTATGGTGATAGTTTTGATGCATATGTTAGATCCTTCCTTGGTAGTGCCAGCTTTTATAGACGGTTTATAAAAGAATTTTCTAAAATTGCTTTGCCTCTAACTAATCTCTTGCAAAAAGATGTACCATTTCTGATTGATGACAATTGTAAGAAGGCATTTGATGATCTCAAACAAATGTTAAATTTACCTTTCGAAATAATGTGTGATGCAAGCAACTTAGCATTAGGAGCTGTTTTAGGACAAAGGATATATAAAAAATTGCATGCTATATACTATGCATCTAGGACCCTTAACCAAGCACAATCTAACTACACCACAACTGAAAAAGAATTTCTTGCTATAGTTTTTGCTTTAGATAAGTTTAGTAGCTACATTGTTGGCTCCCCAGAAATTGTTTACACTGATCATGCAGCGGTTAGGCTTGTTCGATGGATTTTACTTTTGCAAGAATTCAACCTAACCATCAAGGATAGAAAAGGAGCCAACAATTCTGTAGCCGACCATCTTAGTCGAATTGTACAAAAGCAAGAAAGTATGCCAATTTGA

Protein sequence

MPFGLCNALGTFQRCMMSIFSDFIEKCIEVFMDDFTVYGDSFDAYVRSFLGSASFYRRFIKEFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQMLNLPFEIMCDASNLALGAVLGQRIYKKLHAIYYASRTLNQAQSNYTTTEKEFLAIVFALDKFSSYIVGSPEIVYTDHAAVRLVRWILLLQEFNLTIKDRKGANNSVADHLSRIVQKQESMPI
Homology
BLAST of Pay0019253 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.5e-27
Identity = 74/198 (37.37%), Postives = 110/198 (55.56%), Query Frame = 0

Query: 46  VRSFLGSASFYRRFIKEFSKIALPLTNLLQ-----------KDVPFLIDDNCKKAFDDLK 105
           ++ FLG  S+YR+FI++++K+A PLTNL +             VP  +D+   ++F+DLK
Sbjct: 358 LKRFLGMTSYYRKFIQDYAKVAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLK 417

Query: 106 QML-----------NLPFEIMCDASNLALGAVLGQRIYKKLHAIYYASRTLNQAQSNYTT 165
            +L             PF +  DASN A+GAVL Q    +   I Y SR+LN+ + NY T
Sbjct: 418 SILCSSEILAFPCFTKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYAT 477

Query: 166 TEKEFLAIVFALDKFSSYIVGSPEI-VYTDHAAV-----------RLVRWILLLQEFNLT 210
            EKE LAI+++LD   +Y+ G+  I VYTDH  +           +L RW   ++E+N  
Sbjct: 478 IEKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQPLTFALGNRNFNAKLKRWKARIEEYNCE 537

BLAST of Pay0019253 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 8.7e-26
Identity = 93/295 (31.53%), Postives = 127/295 (43.05%), Query Frame = 0

Query: 1   MPFGLCNALGTFQRCMMSIFSDFIEKCIEVFMDDFTVYGDSFDAY--------------- 60
           MPFGL NA  TFQRCM  I    + K   V++DD  V+  S D +               
Sbjct: 334 MPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKAN 393

Query: 61  ------------------------------------------------VRSFLGSASFYR 120
                                                           +++FLG   +YR
Sbjct: 394 LKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYR 453

Query: 121 RFIKEFSKIALPLTNLLQKDVPF-LIDDNCKKAFDDLKQM------LNLP-----FEIMC 180
           +FI  F+ IA P+T  L+K++     +     AF  LK +      L +P     F +  
Sbjct: 454 KFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTT 513

Query: 181 DASNLALGAVLGQRIYKKLHAIYYASRTLNQAQSNYTTTEKEFLAIVFALDKFSSYIVGS 210
           DAS++ALGAVL Q      H + Y SRTLN+ + NY+T EKE LAIV+A   F  Y++G 
Sbjct: 514 DASDVALGAVLSQ----DGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGR 573

BLAST of Pay0019253 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.9e-25
Identity = 96/298 (32.21%), Postives = 127/298 (42.62%), Query Frame = 0

Query: 1   MPFGLCNALGTFQRCMMSIFSDFIEKCIEVFMDDFTVYGDSF------------------ 60
           MPFGL NA  TFQRCM +I    + K   V++DD  ++  S                   
Sbjct: 333 MPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADAN 392

Query: 61  ---------------------------------------------DAYVRSFLGSASFYR 120
                                                        D  +R+FLG   +YR
Sbjct: 393 LKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYR 452

Query: 121 RFIKEFSKIALPLTNLLQKDVPFLIDDNCK----KAFDDLKQM------LNLP-----FE 180
           +FI  ++ IA P+T+ L+K       D  K    +AF+ LK +      L LP     F 
Sbjct: 453 KFIPNYADIAKPMTSCLKKRTKI---DTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFV 512

Query: 181 IMCDASNLALGAVLGQRIYKKLHAIYYASRTLNQAQSNYTTTEKEFLAIVFALDKFSSYI 210
           +  DASNLALGAVL Q      H I + SRTLN  + NY+  EKE LAIV+A   F  Y+
Sbjct: 513 LTTDASNLALGAVLSQ----NGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYL 572

BLAST of Pay0019253 vs. ExPASy Swiss-Prot
Match: P10394 (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 6.9e-23
Identity = 74/189 (39.15%), Postives = 98/189 (51.85%), Query Frame = 0

Query: 47  RSFLGSASFYRRFIKEFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQMLNLP------ 106
           R F+   ++YRRFIK F+  +  +T L +K+VPF   D C+KAF  LK  L  P      
Sbjct: 551 RRFVAFCNYYRRFIKNFADYSRHITRLCKKNVPFEWTDECQKAFIHLKSQLINPTLLQYP 610

Query: 107 -----FEIMCDASNLALGAVLGQRIYKKLHAIYYASRTLNQAQSNYTTTEKEFLAIVFAL 166
                F I  DAS  A GAVL Q        + YASR   + +SN +TTE+E  AI +A+
Sbjct: 611 DFSKEFCITTDASKQACGAVLTQNHNGHQLPVAYASRAFTKGESNKSTTEQELAAIHWAI 670

Query: 167 DKFSSYIVGSPEIVYTDHAAV-----------RLVRWILLLQEFNLTIKDRKGANNSVAD 214
             F  YI G    V TDH  +           +L R  L L+E+N T++  KG +N VAD
Sbjct: 671 IHFRPYIYGKHFTVKTDHRPLTYLFSMVNPSSKLTRIRLELEEYNFTVEYLKGKDNHVAD 730

BLAST of Pay0019253 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.4e-22
Identity = 71/199 (35.68%), Postives = 109/199 (54.77%), Query Frame = 0

Query: 46  VRSFLGSASFYRRFIKEFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQMLNLP----- 105
           +R FLGS ++ R+FI + S++  PL NLL+KDV +       +A +++KQ L  P     
Sbjct: 642 LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 106 ------FEIMCDASNLALGAVLGQR-IYKKLHAIYYASRTLNQAQSNYTTTEKEFLAIVF 165
                   +  DAS++A+GAVL Q+    K + + Y S  +++AQ NY+ ++KE LAI+ 
Sbjct: 702 FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 166 ALDKFSSYIVGS--PEIVYTDHAAV-------------RLVRWILLLQEFNLTIKDRKGA 218
           +L  +  Y+  +  P  + TDH  +             RL RW L LQ+FN  I  R G+
Sbjct: 762 SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

BLAST of Pay0019253 vs. ExPASy TrEMBL
Match: A0A1U8Q7Z8 (Reverse transcriptase OS=Nelumbo nucifera OX=4432 GN=LOC109113903 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.8e-75
Identity = 166/298 (55.70%), Postives = 187/298 (62.75%), Query Frame = 0

Query: 1   MPFGLCNALGTFQRCMMSIFSDFIEKCIEVFMDDFTVYGDSFDAY--------------- 60
           MPFGLCNALGTFQRCMMSIFS FIEKCIE+FMDDFTVYGDSFD Y               
Sbjct: 388 MPFGLCNALGTFQRCMMSIFSYFIEKCIEMFMDDFTVYGDSFDDYLNSLSKILNRCVETN 447

Query: 61  --------------------------------------------VRSFLGSASFYRRFIK 120
                                                       + SFLG A FY RFI+
Sbjct: 448 LVLNYEKCHFMVNEDIVISARGIEVDKAKIDLIVSLPYPTNVREIHSFLGHAGFYGRFIR 507

Query: 121 EFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQML-----------NLPFEIMCDASNL 180
           +FSKIAL L+NLLQKDVPF   D CK+AF  LK++L           NLPFEIM DASN 
Sbjct: 508 DFSKIALLLSNLLQKDVPFNFGDECKEAFGKLKRLLTIALIIQPPDWNLPFEIMSDASNY 567

Query: 181 ALGAVLGQRIYKKLHAIYYASRTLNQAQSNYTTTEKEFLAIVFALDKFSSYIVGSPEIVY 219
           A+GA LGQRI  K H IYYAS+TLN AQSNYTTTEKE LAIVFALDKF SY++GS  IV+
Sbjct: 568 AVGAALGQRIDGKSHVIYYASKTLNAAQSNYTTTEKELLAIVFALDKFRSYLLGSKVIVF 627

BLAST of Pay0019253 vs. ExPASy TrEMBL
Match: A0A392MXJ5 (Uncharacterized protein (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.8e-74
Identity = 158/280 (56.43%), Postives = 184/280 (65.71%), Query Frame = 0

Query: 1   MPFGLCNALGTFQRCMMSIFSDFIEKCIEVFMDDFTVYGDSFD----------------- 60
           MPFGLCNA GTFQRCM+SIFS+FIE C+EVFMDDFTVYG SF+                 
Sbjct: 28  MPFGLCNAPGTFQRCMISIFSEFIENCMEVFMDDFTVYGSSFEDCLNSLDKGIVLGHVIS 87

Query: 61  -----------------------AYVRSFLGSASFYRRFIKEFSKIALPLTNLLQKDVPF 120
                                    +RSFLG A FYRRFIK+FSKIALPL+NLLQKD+ F
Sbjct: 88  SKGMEVDPAKIDVISNLPFPTCVREIRSFLGHAGFYRRFIKDFSKIALPLSNLLQKDIIF 147

Query: 121 LIDDNCKKAFDDLKQML-----------NLPFEIMCDASNLALGAVLGQRIYKKLHAIYY 180
             DD CK+AFD LK+ L             PFEIMCDASN A+GAVL QR+ K  H I Y
Sbjct: 148 TFDDKCKRAFDCLKKALTSTPVIQPPDWTRPFEIMCDASNYAVGAVLAQRVDKVAHVISY 207

Query: 181 ASRTLNQAQSNYTTTEKEFLAIVFALDKFSSYIVGSPEIVYTDHAAV-----------RL 219
           ASRTL+ AQSNYTTTEKE LAIVFALDKF SY++GS  +++TDHAA+           RL
Sbjct: 208 ASRTLDSAQSNYTTTEKELLAIVFALDKFRSYLLGSKVVIFTDHAALKYLLKKSDAKPRL 267

BLAST of Pay0019253 vs. ExPASy TrEMBL
Match: A0A6P6UZG4 (Reverse transcriptase OS=Coffea arabica OX=13443 GN=LOC113716121 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.3e-72
Identity = 150/256 (58.59%), Postives = 180/256 (70.31%), Query Frame = 0

Query: 1   MPFGLCNALGTFQRCMMSIFSDFIEKCIEVFMDDFTVYGDSFD----------------A 60
           MPFGLCNA  TFQRCM+SIFS+++EK IEVFMDDF+VYG   D                 
Sbjct: 624 MPFGLCNAPATFQRCMVSIFSEYVEKIIEVFMDDFSVYGIEVDKAKIDVIYTLPYPASVR 683

Query: 61  YVRSFLGSASFYRRFIKEFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQML------- 120
            VRSFLG A FYRRFIK+FSKI  PL  LLQKDV F  D+ CK AF+ LK++L       
Sbjct: 684 EVRSFLGHAGFYRRFIKDFSKIGAPLFQLLQKDVSFEFDETCKGAFNKLKELLTTSPIIQ 743

Query: 121 ----NLPFEIMCDASNLALGAVLGQRIYKKLHAIYYASRTLNQAQSNYTTTEKEFLAIVF 180
               NLPFEIMCDAS+ A+GAVLGQR+ K  HAIYYASR LN AQ NY+TTEKE LA+VF
Sbjct: 744 PPDWNLPFEIMCDASDYAVGAVLGQRVGKAAHAIYYASRALNGAQLNYSTTEKELLAVVF 803

Query: 181 ALDKFSSYIVGSPEIVYTDHAAV-----------RLVRWILLLQEFNLTIKDRKGANNSV 219
           AL+KF SY++G+  I+++DHAA+           RL+RWILLLQEFNL I+D+KGA N V
Sbjct: 804 ALEKFRSYLLGAKVIIFSDHAALRYLLTKKEAKPRLIRWILLLQEFNLEIRDKKGAENLV 863

BLAST of Pay0019253 vs. ExPASy TrEMBL
Match: A0A151QKV4 (Retrovirus-related Pol polyprotein from transposon 17.6 (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_049680 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 2.2e-72
Identity = 162/303 (53.47%), Postives = 183/303 (60.40%), Query Frame = 0

Query: 1   MPFGLCNALGTFQRCMMSIFSDFIEKCIEVFMDDFTVYGDSFDA---------------- 60
           MPFGLCNA GTFQRCM+SIFSDF+E CIEVFMDDFTVYG SFDA                
Sbjct: 18  MPFGLCNAPGTFQRCMLSIFSDFLENCIEVFMDDFTVYGSSFDACLDSLDRVLNRCIETN 77

Query: 61  -----------------------------------------------YVRSFLGSASFYR 120
                                                           VRSFLG A FYR
Sbjct: 78  LVLNFEKCHFMVEQGIVLGHIISSKGIEVDPAKVSVISQLPYPSCVREVRSFLGHAGFYR 137

Query: 121 RFIKEFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQML-----------NLPFEIMCD 180
           RF+KEFSK ALPL+NLLQKDV F+ DD CK+AFD LK+ L            +PFE+MCD
Sbjct: 138 RFVKEFSKKALPLSNLLQKDVDFVFDDRCKQAFDCLKEALTTTPIIQAPDWTVPFELMCD 197

Query: 181 ASNLALGAVLGQRIYKKLHAIYYASRTLNQAQSNYTTTEKEFLAIVFALDKFSSYIVGSP 219
           ASN ALGAVL QR+ K    IYYASRTL+ AQ+NYTTTEKE LAIVFALDKF SY++GS 
Sbjct: 198 ASNYALGAVLAQRVDKLPRVIYYASRTLDAAQANYTTTEKELLAIVFALDKFRSYLLGSR 257

BLAST of Pay0019253 vs. ExPASy TrEMBL
Match: A0A2G9G7U9 (DNA-directed DNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_26122 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 2.2e-72
Identity = 154/267 (57.68%), Postives = 181/267 (67.79%), Query Frame = 0

Query: 1    MPFGLCNALGTFQRCMMSIFSDFIEKCIEVFMDDFTVYG--------------------- 60
            MPFGLCNA  TFQRCM+SIFSD++E  IEVFMDDFTVYG                     
Sbjct: 851  MPFGLCNAPATFQRCMVSIFSDYVESIIEVFMDDFTVYGIILGHIVSGKGIEVDKAKIEV 910

Query: 61   -DSFD-----AYVRSFLGSASFYRRFIKEFSKIALPLTNLLQKDVPFLIDDNCKKAFDDL 120
              +F        VRSFLG A FYRRFIK+FSKI  PL  LLQKDV F  D  CK AFD+L
Sbjct: 911  IKTFPYPVSVREVRSFLGHAGFYRRFIKDFSKITRPLCKLLQKDVQFDFDKECKTAFDEL 970

Query: 121  KQML-----------NLPFEIMCDASNLALGAVLGQRIYKKLHAIYYASRTLNQAQSNYT 180
            K+ L           NLPFEIMCDASN A+GAVLGQRI K  H IYYASRTL+ AQSNY+
Sbjct: 971  KEALTSAPIIQPPNWNLPFEIMCDASNYAVGAVLGQRIGKTPHVIYYASRTLDNAQSNYS 1030

Query: 181  TTEKEFLAIVFALDKFSSYIVGSPEIVYTDHAAV-----------RLVRWILLLQEFNLT 219
            TTEKE LAI+FAL+KF SY++G+  IVY+DHAA+           RL+RWILLLQEFNL 
Sbjct: 1031 TTEKELLAIIFALEKFRSYLLGTKVIVYSDHAALKYLLSKKEAKPRLIRWILLLQEFNLE 1090

BLAST of Pay0019253 vs. NCBI nr
Match: XP_019054205.1 (PREDICTED: uncharacterized protein LOC109113903 [Nelumbo nucifera])

HSP 1 Score: 291.6 bits (745), Expect = 5.7e-75
Identity = 166/298 (55.70%), Postives = 187/298 (62.75%), Query Frame = 0

Query: 1   MPFGLCNALGTFQRCMMSIFSDFIEKCIEVFMDDFTVYGDSFDAY--------------- 60
           MPFGLCNALGTFQRCMMSIFS FIEKCIE+FMDDFTVYGDSFD Y               
Sbjct: 388 MPFGLCNALGTFQRCMMSIFSYFIEKCIEMFMDDFTVYGDSFDDYLNSLSKILNRCVETN 447

Query: 61  --------------------------------------------VRSFLGSASFYRRFIK 120
                                                       + SFLG A FY RFI+
Sbjct: 448 LVLNYEKCHFMVNEDIVISARGIEVDKAKIDLIVSLPYPTNVREIHSFLGHAGFYGRFIR 507

Query: 121 EFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQML-----------NLPFEIMCDASNL 180
           +FSKIAL L+NLLQKDVPF   D CK+AF  LK++L           NLPFEIM DASN 
Sbjct: 508 DFSKIALLLSNLLQKDVPFNFGDECKEAFGKLKRLLTIALIIQPPDWNLPFEIMSDASNY 567

Query: 181 ALGAVLGQRIYKKLHAIYYASRTLNQAQSNYTTTEKEFLAIVFALDKFSSYIVGSPEIVY 219
           A+GA LGQRI  K H IYYAS+TLN AQSNYTTTEKE LAIVFALDKF SY++GS  IV+
Sbjct: 568 AVGAALGQRIDGKSHVIYYASKTLNAAQSNYTTTEKELLAIVFALDKFRSYLLGSKVIVF 627

BLAST of Pay0019253 vs. NCBI nr
Match: XP_019198426.1 (PREDICTED: uncharacterized protein LOC109192308 [Ipomoea nil])

HSP 1 Score: 289.3 bits (739), Expect = 2.8e-74
Identity = 154/263 (58.56%), Postives = 183/263 (69.58%), Query Frame = 0

Query: 1    MPFGLCNALGTFQRCMMSIFSDFIEKCIEVFMDDFTVYGDSFDA---------------- 60
            MPFGLCNA GTFQRCMMSIFS+FIE CIEVFMDDFTVYG    A                
Sbjct: 901  MPFGLCNAPGTFQRCMMSIFSEFIESCIEVFMDDFTVYGHVISAKGIEVDKAKVDLIVNL 960

Query: 61   -------YVRSFLGSASFYRRFIKEFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQML 120
                    VRSFLG   FYR+FIK+FS+IA+PL+ LLQK+V F     C++AFD LK +L
Sbjct: 961  PYPTNVREVRSFLGHTGFYRKFIKDFSRIAVPLSKLLQKEVTFEFGKECQEAFDKLKALL 1020

Query: 121  -----------NLPFEIMCDASNLALGAVLGQRIYKKLHAIYYASRTLNQAQSNYTTTEK 180
                        LPFEIMCDASN A+GAVLGQR+ K+ H IYYASRTLN AQ +Y+TTEK
Sbjct: 1021 TSAPVIQPLNWELPFEIMCDASNYAVGAVLGQRVGKQSHVIYYASRTLNAAQCSYSTTEK 1080

Query: 181  EFLAIVFALDKFSSYIVGSPEIVYTDHAAV-----------RLVRWILLLQEFNLTIKDR 219
            E LA++FALDKF SY++GS  IV++DH A+           RL+RWILLLQEF+LTIKDR
Sbjct: 1081 ELLAVIFALDKFRSYLLGSKVIVFSDHTALKYLLGRKESKPRLIRWILLLQEFDLTIKDR 1140

BLAST of Pay0019253 vs. NCBI nr
Match: MCH92231.1 (hypothetical protein [Trifolium medium])

HSP 1 Score: 288.9 bits (738), Expect = 3.7e-74
Identity = 158/280 (56.43%), Postives = 184/280 (65.71%), Query Frame = 0

Query: 1   MPFGLCNALGTFQRCMMSIFSDFIEKCIEVFMDDFTVYGDSFD----------------- 60
           MPFGLCNA GTFQRCM+SIFS+FIE C+EVFMDDFTVYG SF+                 
Sbjct: 28  MPFGLCNAPGTFQRCMISIFSEFIENCMEVFMDDFTVYGSSFEDCLNSLDKGIVLGHVIS 87

Query: 61  -----------------------AYVRSFLGSASFYRRFIKEFSKIALPLTNLLQKDVPF 120
                                    +RSFLG A FYRRFIK+FSKIALPL+NLLQKD+ F
Sbjct: 88  SKGMEVDPAKIDVISNLPFPTCVREIRSFLGHAGFYRRFIKDFSKIALPLSNLLQKDIIF 147

Query: 121 LIDDNCKKAFDDLKQML-----------NLPFEIMCDASNLALGAVLGQRIYKKLHAIYY 180
             DD CK+AFD LK+ L             PFEIMCDASN A+GAVL QR+ K  H I Y
Sbjct: 148 TFDDKCKRAFDCLKKALTSTPVIQPPDWTRPFEIMCDASNYAVGAVLAQRVDKVAHVISY 207

Query: 181 ASRTLNQAQSNYTTTEKEFLAIVFALDKFSSYIVGSPEIVYTDHAAV-----------RL 219
           ASRTL+ AQSNYTTTEKE LAIVFALDKF SY++GS  +++TDHAA+           RL
Sbjct: 208 ASRTLDSAQSNYTTTEKELLAIVFALDKFRSYLLGSKVVIFTDHAALKYLLKKSDAKPRL 267

BLAST of Pay0019253 vs. NCBI nr
Match: XP_017233173.1 (PREDICTED: uncharacterized protein LOC108207223 [Daucus carota subsp. sativus])

HSP 1 Score: 288.5 bits (737), Expect = 4.8e-74
Identity = 155/266 (58.27%), Postives = 186/266 (69.92%), Query Frame = 0

Query: 1    MPFGLCNALGTFQRCMMSIFSDFIEKCIEVFMDDFTVYGDSFD----------------- 60
            + FG CNA GTFQRCMMSIFSD++ K IEVFMDDF+V+GDSFD                 
Sbjct: 972  LSFGQCNAPGTFQRCMMSIFSDYVGKIIEVFMDDFSVFGDSFDDCLKNLGFVDKSKIDLI 1031

Query: 61   ---------AYVRSFLGSASFYRRFIKEFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLK 120
                       +RSFLG A FYRRFI++FSKI  PLTNLLQKDV F  +D CK AF++LK
Sbjct: 1032 RYLPTPSSVKEIRSFLGHAGFYRRFIQDFSKITRPLTNLLQKDVLFEFNDECKVAFEELK 1091

Query: 121  QML-----------NLPFEIMCDASNLALGAVLGQRIYKKLHAIYYASRTLNQAQSNYTT 180
            Q L           +LPFEIMCDAS+ A+GAVLGQR  KK+HAIYYASRTLN AQ NY T
Sbjct: 1092 QKLTSSPIIQAPDWSLPFEIMCDASDYAVGAVLGQRKDKKVHAIYYASRTLNDAQLNYAT 1151

Query: 181  TEKEFLAIVFALDKFSSYIVGSPEIVYTDHAAV-----------RLVRWILLLQEFNLTI 219
            TEKE LA+VFAL+KF SY++G+  IV+TDHAA+           RL+RWILLLQEF+L I
Sbjct: 1152 TEKELLAVVFALEKFRSYLLGTKVIVFTDHAALKYLLAKKEAKPRLIRWILLLQEFDLEI 1211

BLAST of Pay0019253 vs. NCBI nr
Match: XP_031112037.1 (uncharacterized protein LOC116016008 [Ipomoea triloba])

HSP 1 Score: 284.6 bits (727), Expect = 7.0e-73
Identity = 158/303 (52.15%), Postives = 189/303 (62.38%), Query Frame = 0

Query: 1    MPFGLCNALGTFQRCMMSIFSDFIEKCIEVFMDDFTVYGDSFDA---------------- 60
            MPFGLCNA GTFQRCMMSIFS+FIE CIEVFMDDFTVYGDSF+                 
Sbjct: 780  MPFGLCNAPGTFQRCMMSIFSEFIESCIEVFMDDFTVYGDSFEVCLNNLSKVLKRCIDAN 839

Query: 61   -----------------------------------------------YVRSFLGSASFYR 120
                                                            VRSFLG A FYR
Sbjct: 840  LVLNYEKCHFMVSQGIVLGHVISAKGIEVDKAKVDLIVNLPYPTKVREVRSFLGHAGFYR 899

Query: 121  RFIKEFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQML-----------NLPFEIMCD 180
            RFIK+FS+IA+PL+ LLQK+V F     C++AFD LK +L            LPFEIMCD
Sbjct: 900  RFIKDFSRIAVPLSKLLQKEVTFEFGKECQEAFDKLKALLTSAPIIQPPNWELPFEIMCD 959

Query: 181  ASNLALGAVLGQRIYKKLHAIYYASRTLNQAQSNYTTTEKEFLAIVFALDKFSSYIVGSP 219
            ASN A+GAVLGQ++ K+ H IYYASRTLN AQ +Y+TTEKE LA++FALDKF SY++GS 
Sbjct: 960  ASNYAVGAVLGQKVGKQSHVIYYASRTLNTAQCSYSTTEKELLAVIFALDKFRSYLLGSK 1019

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8I7P93.5e-2737.37Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast... [more]
P043238.7e-2631.53Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast... [more]
P208251.9e-2532.21Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste... [more]
P103946.9e-2339.15Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaste... [more]
Q9UR073.4e-2235.68Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
Match NameE-valueIdentityDescription
A0A1U8Q7Z82.8e-7555.70Reverse transcriptase OS=Nelumbo nucifera OX=4432 GN=LOC109113903 PE=4 SV=1[more]
A0A392MXJ51.8e-7456.43Uncharacterized protein (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1[more]
A0A6P6UZG41.3e-7258.59Reverse transcriptase OS=Coffea arabica OX=13443 GN=LOC113716121 PE=4 SV=1[more]
A0A151QKV42.2e-7253.47Retrovirus-related Pol polyprotein from transposon 17.6 (Fragment) OS=Cajanus ca... [more]
A0A2G9G7U92.2e-7257.68DNA-directed DNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_261... [more]
Match NameE-valueIdentityDescription
XP_019054205.15.7e-7555.70PREDICTED: uncharacterized protein LOC109113903 [Nelumbo nucifera][more]
XP_019198426.12.8e-7458.56PREDICTED: uncharacterized protein LOC109192308 [Ipomoea nil][more]
MCH92231.13.7e-7456.43hypothetical protein [Trifolium medium][more]
XP_017233173.14.8e-7458.27PREDICTED: uncharacterized protein LOC108207223 [Daucus carota subsp. sativus][more]
XP_031112037.17.0e-7352.15uncharacterized protein LOC116016008 [Ipomoea triloba][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 98..178
e-value: 3.1E-24
score: 85.3
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 48..114
e-value: 2.5E-16
score: 61.5
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 1..47
e-value: 9.4E-11
score: 43.7
NoneNo IPR availablePANTHERPTHR24559:SF324TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEINcoord: 46..183
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 46..183
NoneNo IPR availableCDDcd09274RNase_HI_RT_Ty3coord: 102..210
e-value: 1.21279E-50
score: 158.425
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 1..192

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0019253.1Pay0019253.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
molecular_function GO:0016740 transferase activity