Pay0019201 (gene) Melon (Payzawat) v1

Overview


Name	Pay0019201
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	ras-related protein Rab11C-like
Location	chr04: 24747312 .. 24750842 (-)
RNA-Seq Expression	Pay0019201
Synteny	Pay0019201

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTTTGTAAAGAAACCTTAACTTTTTTTCCTCTCCCATATTTCTCTTCGACAAAAGAAAGCTCCACCATGCGCGTCTTCCGTTTCTAATCGTTCGTCTGCTCGCGTCGATTCCAGCAGTCGTCGTCTGCTCACAGTGTCCGCCGCCAGTTCGATCGATCTCCTCAAGCTGCTGCCATTTCTGCTCTTTTCCAGTCCGATCTTCTCAAGTTGCCGTCGTTATCTGCTCACAGCATCCGCCACCAGTTCGATCGATCTCCTCAAGCTGTTGCCATTTTTGCCCTTTTCCAGTCCGATCTCCTCAAGTCGCCGTCGTCTGCTCGTTGTGTTCGCTGGTTCGTCCGCCAGCAGTTGCATCTGTCGTCATTTTTGCTCTTTGCAACCGCAACCATCACCAGGTTCTTAGCTCATTATTTATTTCTTTATTGCTTATTTTGCGTCACTGCTCAGTTTGTTTATTCAAGATTGGTGTGTCACTTGGGAATGGCTATGGTGGCCACTACCCTTTCGAACCTGTCTTTTGCCCTCTTCCATGGAAATTCACACAAAAATGAATTTGGGTTTATGGGTATGTGGAGATAGCCCATCAAGTATCTCAAATCCAATCTTAGAGCTCTAGTTGTGAGGTAATCGTTTCTATTTTTGTTCTTTTTAGACGTTTACTTCTTTTTTAGTTGTTTTCATGAGTTTAACTGGGTGGAGGTTTATGTAAGCTTGTGGTCTCCGTTCTTTTCACTATTTTTAAAAAAATCAATCATGGGTTTGGGATATTAGTTGCCTTTTTCATCTTTGTTTTGAGCTTTAGCTTTTGGGTCTCTTTGCAGATGTTCCTTTGTTCAAATGATATTGCAATAGAGATAATTATTGGTTTGAACTTGAAATTCTTATACCATATATTATCTTAACTTTCTCCTAAATTTACCTCTGGAAATAGTGTTGCGCTAATATCATTCCTGGTTGAACTTTCAATCTTCTTCCTTTAGCGTAGTTAGCGAATGAAATTCTTACAGGTTTCATGTTAACTCAAGGAGTTAGCAATGGATCTTGATTCATCCAAATTTGATATAGTTTTTGTTGTTTTGTTTAGGGTTGTTAGATGAAGGGAGAAGGATGTGGTTATGTGTTGTGGAACTTGTTTGCGTGGATGCCAATCAACTAACGTTGGTGAACCAAAAACAAAAAGAAATTTTCTTGACAATGCTAGCAATATTCTTACCAATTTGTTAAGTGGTGGAAATTTGGGATCTATGTCGATAGCTGAAGGTGCGGTCTCTGATTTGTTTGGCCGTCTACTCTTCTTTGCTCTATATGATTGGTTCTTATAGGTATTTGCATCTCATAAATCTCTTCGGTTTCAACTGAAATATTAGTTTCCTATAAGGACACTCACTCCCTCTTATAATGTTAATGTGATGTGCACCTTTTCATTTTGTCTGCTCATGAGATCTAAACATCTATTTCTTTTTATTCATTTTTTATTCTTCATCTGCAGCATAGATCTGTTTATAGACTTGCCTTTGGACCAAAAGCATTTGTTGTTGTATCAGAACACATTTGCTTTAGAACTTTTGAAGTGCTTTTTATCATGTTCTGTATACTTTCTTTTGGTTACAACTTGTAGGGCAGAGTTAGTAAAAGGGCTTGAAATTAAAAAAGGAGAATATAAATTTGGTTAAAACTATTCTATCACTGTTCTTTATGTTGCTACTGCAGCTTCTACTCCTAAAATTCATCATGATATCTCTAACATCTCTAATTTCCTCCTCTATAGCTTTTAAGTTCGACAGTAAGTACTGATTTGTATTGTTCTGTAGTTGTTCACTCCCAAATTGATATTGACATTCACTTGTTAGGCTTGGTCGAAATAGATCCAAACAAAAGAATGCCGCATTTCACCTCAGAGAGAAGAGGGTTAAATACATGGCTTTTCATTTCTTTTTTTTTACAAAGTAAAATGTTCTTTTAAGGAACTTCATTGCTAATTTTCATGGTATTTTTTTCTGTGGCTAATGTTATGTTTACCTTAGAATGTTTCGTATTTACTTTGATAGTTCATGATCTTCTTGTTCTTCATGATTTTCATATTTAATAGGAGGCTATTATCCCACCCCCAAGTTTTAATTCTCTTCCTTGACACCTACTAATATGCAGATCTATGCTCCAAGGTATTCATTCTTTTCTATACTAGAAAATTGTCGTCGTGCACTTCTTAATATCTTGTTGACTTGAGCTTCAGTTCTAGATTGTTGGTTCTAATTTTTTGGTTTGTGGTCATTTGATTTGTAACTTTGTTTGAAAATTCCACTGTTTACTCAATGATTCAATTCTATGAAGGATGAATTTTGTTATAGTTGTTTGAAATGAAACAAATTTTTGGTCTTGTGGCATTACACAATTGTGTGAATTTATAGATTTATACGTTTTTTTTTCTAGGTGTAGAAATGAAACAAATTTTTGGTCTTGTAGCATTACACGATTGTTCGGCTTATTTTAATGCATCTCTCAATATTTACCTGCTTTCTAAATAGATATGTACTCAAGAAAATGATCGCGGTTAGTTTTCTATTGTTCTCTGTTGCTAATGGAACCCCAATCTTTATAGTTAAAATGACCCATTCAAGATTTATACTTTTTTTTTCTGAGTGTAGAAATGAAACAAATTTTTGCTCTTATGGCAAAGTAAACAGAGAAGTTCAAGTGCACTGCCCACCAAGAGGTTAGTTTATTTAGAACCTATATCAACTATTTAATTGTTTGAAATACTACTTATTATTCCCAAGATATGATCAAATTGACTTGGTTCTGCCTTTGAAATTTGTCAACTACAAATGAATTGCTAGTTAACTCGGGGGGTAAATAAATAGCTATTAACTTAGGAAATGTTTAATGTCTGCCTCACATTCAACGATAATGCTTAATGCATGTTACAAAACATATCACATAGAAATTGGAGAAAATATAAAGAATCCGGGGATTCTTCAATTCGCTTTTCAATTTGGGGATTCTCTTGCTCCTTAAATGTTTCCGTTTCAGCTACCTACTACAAATGATTCCAATTCTTTCAATTTTGTTTACTCAATTGTTGAATTTGATGTTTTTGGATTAGGTTTGTTCAAGAAATCTAGGGCAGAGACTGCTATGGCTCATAAGGTAGACCACGAGTATGATTATTTGTTTAAGATTGTTCTGATTGGGGATTCCGACGTTGGGAAGTCCAACATTCTTTCGAGATTTACTAGAAACGAGTTTTGCTTGGAGTCCAAATCCACCATTGATCTTTTGGGTTAGATAAACAAGTTTTGTTGATACTAGATATAAGAGAACTAGTTTTGTTGATATTTTGTTAATACTGGATATAGGTGAACTAGTTTTGTTGATATTGGATATAGGTAAAAGACAAGTTTTGATATGGTATACCTTTAGGCTATACATATATTTTGTTTATACTGACATATAGATGGAATGTTTAGGCTATTGTTAGAAGTTTGGGCTGCACATATATATGTTGTAATGAAGTATGTAATGACCAAC

mRNA sequence

AAATTTTGTAAAGAAACCTTAACTTTTTTTCCTCTCCCATATTTCTCTTCGACAAAAGAAAGCTCCACCATGCGCGTCTTCCGTTTCTAATCGTTCGTCTGCTCGCGTCGATTCCAGCAGTCGTCGTCTGCTCACAGTGTCCGCCGCCAGTTCGATCGATCTCCTCAAGCTGCTGCCATTTCTGCTCTTTTCCAGTCCGATCTTCTCAAGTTGCCGTCGTTATCTGCTCACAGCATCCGCCACCAGTTCGATCGATCTCCTCAAGCTGTTGCCATTTTTGCCCTTTTCCAGTCCGATCTCCTCAAGTCGCCGTCGTCTGCTCGTTGTGTTCGCTGGTTCGTCCGCCAGCAGTTGCATCTGTCGTCATTTTTGCTCTTTGCAACCGCAACCATCACCAGGGTTGTTAGATGAAGGGAGAAGGATGTGGTTATGTGTTGTGGAACTTGTTTGCGTGGATGCCAATCAACTAACGTTGGTGAACCAAAAACAAAAAGAAATTTTCTTGACAATGCTAGCAATATTCTTACCAATTTGTTAAGTGGTGGAAATTTGGGATCTATGTCGATAGCTGAAGGTGCGGTCTCTGATTTGTTTGGCCGTCTACTCTTCTTTGCTCTATATGATTGGTTCTTATAGGTATTTGCATCTCATAAATCTCTTCGGTTTCAACTGAAATATTAGTTTCCTATAAGGACACTCACTCCCTCTTATAATGTTAATGTGATGTGCACCTTTTCATTTTGTCTGCTCATGAGATCTAAACATCTATTTCTTTTTATTCATTTTTTATTCTTCATCTGCAGCATAGATCTGTTTATAGACTTGCCTTTGGACCAAAAGCATTTGTTGTTGTATCAGAACACATTTGCTTTAGAACTTTTGAAGTGCTTTTTATCATGTTCTGTATACTTTCTTTTGGTTACAACTTGTAGGGCAGAGTTAGTAAAAGGGCTTGAAATTAAAAAAGGAGAATATAAATTTGGTTAAAACTATTCTATCACTGTTCTTTATGTTGCTACTGCAGCTTCTACTCCTAAAATTCATCATGATATCTCTAACATCTCTAATTTCCTCCTCTATAGCTTTTAAGTTCGACAGTAAGTACTGATTTGTATTGTTCTGTAGTTGTTCACTCCCAAATTGATATTGACATTCACTTGTTAGGCTTGGTCGAAATAGATCCAAACAAAAGAATGCCGCATTTCACCTCAGAGAGAAGAGGGTTAAATACATGGCTTTTCATTTCTTTTTTTTTACAAAGTAAAATGTTCTTTTAAGGAACTTCATTGCTAATTTTCATGGTATTTTTTTCTGTGGCTAATGTTATGTTTACCTTAGAATGTTTCGTATTTACTTTGATAGTTCATGATCTTCTTGTTCTTCATGATTTTCATATTTAATAGGAGGCTATTATCCCACCCCCAAGTTTTAATTCTCTTCCTTGACACCTACTAATATGCAGATCTATGCTCCAAGGTATTCATTCTTTTCTATACTAGAAAATTGTCGTCGTGCACTTCTTAATATCTTGTTGACTTGAGCTTCAGTTCTAGATTGTTGGTTCTAATTTTTTGGTTTGTGGTCATTTGATTTGTAACTTTGTTTGAAAATTCCACTGTTTACTCAATGATTCAATTCTATGAAGGATGAATTTTGTTATAGTTGTTTGAAATGAAACAAATTTTTGGTCTTGTGGCATTACACAATTGTGTGAATTTATAGATTTATACGTTTTTTTTTCTAGGTGTAGAAATGAAACAAATTTTTGGTCTTGTAGCATTACACGATTGTTCGGCTTATTTTAATGCATCTCTCAATATTTACCTGCTTTCTAAATAGATATGTACTCAAGAAAATGATCGCGGTTAGTTTTCTATTGTTCTCTGTTGCTAATGGAACCCCAATCTTTATAGTTAAAATGACCCATTCAAGATTTATACTTTTTTTTTCTGAGTGTAGAAATGAAACAAATTTTTGCTCTTATGGCAAAGTAAACAGAGAAGTTCAAGTGCACTGCCCACCAAGAGGTTTGTTCAAGAAATCTAGGGCAGAGACTGCTATGGCTCATAAGGTAGACCACGAGTATGATTATTTGTTTAAGATTGTTCTGATTGGGGATTCCGACGTTGGGAAGTCCAACATTCTTTCGAGATTTACTAGAAACGAGTTTTGCTTGGAGTCCAAATCCACCATTGATCTTTTGGGTTAGATAAACAAGTTTTGTTGATACTAGATATAAGAGAACTAGTTTTGTTGATATTTTGTTAATACTGGATATAGGTGAACTAGTTTTGTTGATATTGGATATAGGTAAAAGACAAGTTTTGATATGGTATACCTTTAGGCTATACATATATTTTGTTTATACTGACATATAGATGGAATGTTTAGGCTATTGTTAGAAGTTTGGGCTGCACATATATATGTTGTAATGAAGTATGTAATGACCAAC

Coding sequence (CDS)

ATGCATCTCTCAATATTTACCTGCTTTCTAAATAGATATGTACTCAAGAAAATGATCGCGGTTAGTTTTCTATTGTTCTCTGTTGCTAATGGAACCCCAATCTTTATAGTTAAAATGACCCATTCAAGATTTATACTTTTTTTTTCTGAGTGTAGAAATGAAACAAATTTTTGCTCTTATGGCAAAGTAAACAGAGAAGTTCAAGTGCACTGCCCACCAAGAGGTTTGTTCAAGAAATCTAGGGCAGAGACTGCTATGGCTCATAAGGTAGACCACGAGTATGATTATTTGTTTAAGATTGTTCTGATTGGGGATTCCGACGTTGGGAAGTCCAACATTCTTTCGAGATTTACTAGAAACGAGTTTTGCTTGGAGTCCAAATCCACCATTGATCTTTTGGGTTAG

Protein sequence

MHLSIFTCFLNRYVLKKMIAVSFLLFSVANGTPIFIVKMTHSRFILFFSECRNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG

Homology

[Close]

BLAST of Pay0019201 vs. ExPASy Swiss-Prot
Match: Q40193 (Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 7.0e-18
Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0


Query: 86  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 131
           MAH+VDHEYDYLFKIVLIGDS VGKSNILSRFTRNEFCLESKSTI
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]

BLAST of Pay0019201 vs. ExPASy Swiss-Prot
Match: Q39434 (Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.5e-17
Identity = 42/45 (93.33%), Postives = 44/45 (97.78%), Query Frame = 0


Query: 86  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 131
           MA++VDHEYDYLFKIVLIGDS VGKSNILSRFTRNEFCLESKSTI
Sbjct: 1   MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]

BLAST of Pay0019201 vs. ExPASy Swiss-Prot
Match: Q9LNW1 (Ras-related protein RABA2b OS=Arabidopsis thaliana OX=3702 GN=RABA2B PE=2 SV=2)

HSP 1 Score: 88.6 bits (218), Expect = 5.9e-17
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = 0


Query: 86  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 131
           MA+++DHEYDYLFKIVLIGDS VGKSNILSRFTRNEFCLESKSTI
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]

BLAST of Pay0019201 vs. ExPASy Swiss-Prot
Match: Q40523 (Ras-related protein Rab11A OS=Nicotiana tabacum OX=4097 GN=RAB11A PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.0e-16
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = 0


Query: 86  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 131
           MA++VDHEYDYLFK+VLIGDS VGKSNILSRFTRNEFCLESKSTI
Sbjct: 1   MANRVDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]

BLAST of Pay0019201 vs. ExPASy Swiss-Prot
Match: Q96283 (Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4)

HSP 1 Score: 87.0 bits (214), Expect = 1.7e-16
Identity = 41/45 (91.11%), Postives = 42/45 (93.33%), Query Frame = 0


Query: 86  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 131
           M H+VD EYDYLFKIVLIGDS VGKSNILSRFTRNEFCLESKSTI
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]

BLAST of Pay0019201 vs. ExPASy TrEMBL
Match: A0A5A7UGE0 (Ras-related protein Rab11C-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold148G00340 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.6e-41
Identity = 89/103 (86.41%), Postives = 93/103 (90.29%), Query Frame = 0


Query: 35  FIVKMTH-SRFILFFSE--CRNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVD 94
           F+ +  H S F+LF +    RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVD
Sbjct: 77  FVRQQLHLSSFLLFATATITRNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVD 136

Query: 95  HEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG 135
           HEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG
Sbjct: 137 HEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG 179

[Close]

BLAST of Pay0019201 vs. ExPASy TrEMBL
Match: A0A1S3CFF6 (ras-related protein Rab11C-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500284 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 6.1e-41
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 52  RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKS 111
           RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKS
Sbjct: 7   RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKS 66

Query: 112 NILSRFTRNEFCLESKSTIDLLG 135
           NILSRFTRNEFCLESKSTIDLLG
Sbjct: 67  NILSRFTRNEFCLESKSTIDLLG 89

[Close]

BLAST of Pay0019201 vs. ExPASy TrEMBL
Match: A0A1S3CFW6 (ras-related protein Rab11C-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500284 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 6.1e-41
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 52  RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKS 111
           RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKS
Sbjct: 6   RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKS 65

Query: 112 NILSRFTRNEFCLESKSTIDLLG 135
           NILSRFTRNEFCLESKSTIDLLG
Sbjct: 66  NILSRFTRNEFCLESKSTIDLLG 88

[Close]

BLAST of Pay0019201 vs. ExPASy TrEMBL
Match: A0A1S3BJ02 (ras-related protein Rab11C-like OS=Cucumis melo OX=3656 GN=LOC103490420 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 7.0e-37
Identity = 77/83 (92.77%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 52  RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKS 111
           RNETNFCSYGKVNREVQ+HCPPRGLFKKSR ET MAHKVDHEYDYLFKIV IGDS VGKS
Sbjct: 7   RNETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKS 66

Query: 112 NILSRFTRNEFCLESKSTIDLLG 135
           NILSRFTRNEF LESKSTIDLLG
Sbjct: 67  NILSRFTRNEFYLESKSTIDLLG 89

[Close]

BLAST of Pay0019201 vs. ExPASy TrEMBL
Match: A0A5D3BS78 (Ras-related protein Rab11C-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G001340 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 2.8e-22
Identity = 60/89 (67.42%), Postives = 65/89 (73.03%), Query Frame = 0


Query: 46  LFFSECRNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGD 105
           +F S+     +  S+  V   V+      GLFKKSR ET MAHKVDHEYDYLFKIV IGD
Sbjct: 1   MFLSQLPTSNDSDSFNFVYSIVEFDIFGSGLFKKSRVETTMAHKVDHEYDYLFKIVSIGD 60

Query: 106 SDVGKSNILSRFTRNEFCLESKSTIDLLG 135
           S VGKSNILSRFTRNEF LESKSTIDLLG
Sbjct: 61  SGVGKSNILSRFTRNEFYLESKSTIDLLG 89

[Close]

BLAST of Pay0019201 vs. NCBI nr
Match: KAA0052805.1 (ras-related protein Rab11C-like isoform X2 [Cucumis melo var. makuwa] >TYK04163.1 ras-related protein Rab11C-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 178.7 bits (452), Expect = 3.3e-41
Identity = 89/103 (86.41%), Postives = 93/103 (90.29%), Query Frame = 0


Query: 35  FIVKMTH-SRFILFFSE--CRNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVD 94
           F+ +  H S F+LF +    RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVD
Sbjct: 77  FVRQQLHLSSFLLFATATITRNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVD 136

Query: 95  HEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG 135
           HEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG
Sbjct: 137 HEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTIDLLG 179

[Close]

BLAST of Pay0019201 vs. NCBI nr
Match: XP_008461756.1 (PREDICTED: ras-related protein Rab11C-like isoform X2 [Cucumis melo])

HSP 1 Score: 176.8 bits (447), Expect = 1.3e-40
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 52  RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKS 111
           RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKS
Sbjct: 6   RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKS 65

Query: 112 NILSRFTRNEFCLESKSTIDLLG 135
           NILSRFTRNEFCLESKSTIDLLG
Sbjct: 66  NILSRFTRNEFCLESKSTIDLLG 88

[Close]

BLAST of Pay0019201 vs. NCBI nr
Match: XP_008461753.1 (PREDICTED: ras-related protein Rab11C-like isoform X1 [Cucumis melo] >XP_008461755.1 PREDICTED: ras-related protein Rab11C-like isoform X1 [Cucumis melo])

HSP 1 Score: 176.8 bits (447), Expect = 1.3e-40
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 52  RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKS 111
           RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKS
Sbjct: 7   RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKS 66

Query: 112 NILSRFTRNEFCLESKSTIDLLG 135
           NILSRFTRNEFCLESKSTIDLLG
Sbjct: 67  NILSRFTRNEFCLESKSTIDLLG 89

[Close]

BLAST of Pay0019201 vs. NCBI nr
Match: XP_008448132.1 (PREDICTED: ras-related protein Rab11C-like [Cucumis melo])

HSP 1 Score: 163.3 bits (412), Expect = 1.4e-36
Identity = 77/83 (92.77%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 52  RNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKS 111
           RNETNFCSYGKVNREVQ+HCPPRGLFKKSR ET MAHKVDHEYDYLFKIV IGDS VGKS
Sbjct: 7   RNETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKS 66

Query: 112 NILSRFTRNEFCLESKSTIDLLG 135
           NILSRFTRNEF LESKSTIDLLG
Sbjct: 67  NILSRFTRNEFYLESKSTIDLLG 89

[Close]

BLAST of Pay0019201 vs. NCBI nr
Match: TYK01106.1 (ras-related protein Rab11C-like [Cucumis melo var. makuwa])

HSP 1 Score: 114.8 bits (286), Expect = 5.9e-22
Identity = 60/89 (67.42%), Postives = 65/89 (73.03%), Query Frame = 0


Query: 46  LFFSECRNETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGD 105
           +F S+     +  S+  V   V+      GLFKKSR ET MAHKVDHEYDYLFKIV IGD
Sbjct: 1   MFLSQLPTSNDSDSFNFVYSIVEFDIFGSGLFKKSRVETTMAHKVDHEYDYLFKIVSIGD 60

Query: 106 SDVGKSNILSRFTRNEFCLESKSTIDLLG 135
           S VGKSNILSRFTRNEF LESKSTIDLLG
Sbjct: 61  SGVGKSNILSRFTRNEFYLESKSTIDLLG 89

[Close]

BLAST of Pay0019201 vs. TAIR 10
Match: AT1G07410.1 (RAB GTPase homolog A2B )

HSP 1 Score: 88.6 bits (218), Expect = 4.2e-18
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = 0


Query: 86  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 131
           MA+++DHEYDYLFKIVLIGDS VGKSNILSRFTRNEFCLESKSTI
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]

BLAST of Pay0019201 vs. TAIR 10
Match: AT3G46830.1 (RAB GTPase homolog A2C )

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-17
Identity = 41/45 (91.11%), Postives = 42/45 (93.33%), Query Frame = 0


Query: 86  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 131
           M H+VD EYDYLFKIVLIGDS VGKSNILSRFTRNEFCLESKSTI
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]

BLAST of Pay0019201 vs. TAIR 10
Match: AT5G59150.1 (RAB GTPase homolog A2D )

HSP 1 Score: 84.7 bits (208), Expect = 6.1e-17
Identity = 39/45 (86.67%), Postives = 43/45 (95.56%), Query Frame = 0


Query: 86  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 131
           MAH+V+ +YDYLFKIVLIGDS VGK+NILSRFTRNEFCLESKSTI
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTI 45

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BLAST of Pay0019201 vs. TAIR 10
Match: AT1G09630.1 (RAB GTPase 11C )

HSP 1 Score: 82.0 bits (201), Expect = 3.9e-16
Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = 0


Query: 86  MAHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 131
           MA + D EYDYLFK+VLIGDS VGKSN+LSRFTRNEFCLESKSTI
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTI 45

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BLAST of Pay0019201 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 77.4 bits (189), Expect = 9.7e-15
Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 0


Query: 87  AHKVDHEYDYLFKIVLIGDSDVGKSNILSRFTRNEFCLESKSTI 131
           A++ D EYDYLFK+VLIGDS VGKSN+LSRFTRNEF LESKSTI
Sbjct: 3   AYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTI 46

The following BLAST results are available for this feature:

BLAST of Pay0019201 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40193	7.0e-18	95.56	Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1	[more]
Q39434	4.5e-17	93.33	Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1	[more]
Q9LNW1	5.9e-17	91.11	Ras-related protein RABA2b OS=Arabidopsis thaliana OX=3702 GN=RABA2B PE=2 SV=2	[more]
Q40523	1.0e-16	91.11	Ras-related protein Rab11A OS=Nicotiana tabacum OX=4097 GN=RAB11A PE=2 SV=1	[more]
Q96283	1.7e-16	91.11	Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4	[more]

BLAST of Pay0019201 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UGE0	1.6e-41	86.41	Ras-related protein Rab11C-like isoform X2 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CFF6	6.1e-41	100.00	ras-related protein Rab11C-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1035002...	[more]
A0A1S3CFW6	6.1e-41	100.00	ras-related protein Rab11C-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1035002...	[more]
A0A1S3BJ02	7.0e-37	92.77	ras-related protein Rab11C-like OS=Cucumis melo OX=3656 GN=LOC103490420 PE=4 SV=...	[more]
A0A5D3BS78	2.8e-22	67.42	Ras-related protein Rab11C-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of Pay0019201 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052805.1	3.3e-41	86.41	ras-related protein Rab11C-like isoform X2 [Cucumis melo var. makuwa] >TYK04163....	[more]
XP_008461756.1	1.3e-40	100.00	PREDICTED: ras-related protein Rab11C-like isoform X2 [Cucumis melo]	[more]
XP_008461753.1	1.3e-40	100.00	PREDICTED: ras-related protein Rab11C-like isoform X1 [Cucumis melo] >XP_0084617...	[more]
XP_008448132.1	1.4e-36	92.77	PREDICTED: ras-related protein Rab11C-like [Cucumis melo]	[more]
TYK01106.1	5.9e-22	67.42	ras-related protein Rab11C-like [Cucumis melo var. makuwa]	[more]

BLAST of Pay0019201 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07410.1	4.2e-18	91.11	RAB GTPase homolog A2B	[more]
AT3G46830.1	1.2e-17	91.11	RAB GTPase homolog A2C	[more]
AT5G59150.1	6.1e-17	86.67	RAB GTPase homolog A2D	[more]
AT1G09630.1	3.9e-16	84.44	RAB GTPase 11C	[more]
AT5G60860.1	9.7e-15	81.82	RAB GTPase homolog A1F	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 99..130 e-value: 2.2E-7 score: 30.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 88..132 e-value: 1.9E-10 score: 42.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 93..131
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 86..130
None	No IPR available	PANTHER	PTHR47979:SF63	RAS-RELATED PROTEIN RAB11C	coord: 86..130
None	No IPR available	PROSITE	PS51419	RAB	coord: 93..134 score: 9.138267

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0019201.4	Pay0019201.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006878	cellular copper ion homeostasis
biological_process	GO:0035434	copper ion transmembrane transport
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005375	copper ion transmembrane transporter activity
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0004672	protein kinase activity