Pay0019135 (gene) Melon (Payzawat) v1

Overview


Name	Pay0019135
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Reverse transcriptase
Location	chr11: 3178799 .. 3180025 (+)
RNA-Seq Expression	Pay0019135
Synteny	Pay0019135

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCACCACGTACTGGCAGACGACGCCGGCAGAATCAGGACGGGATGCAAGGTTCTGCCCAAGGTCCATCTGTAGGGGAATCTAGTACCCTAAGAGTTCGAGGTGGGGCAGGAAATGAGCAGTTTGCGAGAACAACACAGGAGATAGGAAGGCCAGATAGAGCAGAGCCTAATGATCCAGAAAAGGCATATGGAATTGAACGGCTGAAGAAGTTAGGGGCTACAGTGTTTAAGGGTTCCACAGATCCAGTTGATGCAGAGAACTGGTTGAATATGCTTGAAAAGTGTTTTGATGTGATGAATTGTCCTGAGGAGCGAAAGGTTAGATTGGCCACATTTTTGTTGCAAAAAGAGGCTGAAGGATGGTGGAAATCTATATTAGCAAGGCGCAGTGATGCACGTGCTTTAGACTGGCAGACTTTTAGAGTCATATTCGAAGATAAGTATTATCCCAGCACATACTGCGAAGCCAAGAGGGATGAATTTCTGGGGTTGAAACAAGGATCACTTTCAGTGGCTGAGTATGAGAGGAAGTATACCGAGCTTTCACGGTATGCTGACGTTATTGTGGCTTCTGAGAGTGACAGGTGCCGAAGGTTTGAAAGAGGGTTGCGTTTTGAAATACGTACCCCAGTTACAGCCATTGCTAAGTGGACGAATTTCTCTCAGTTAGTGGAGACTGCCCTTCGTGTGGAGCAGAGTATAACAGAAGAGAAATCAGCAGTGGAGCTTAGTCGTGGGACTTCAACAGCTAGTGGATTTAGAGGCCGTGAGCAGCGGAGGTTCACGCCTGGGATAAATATTTCAAGCCGTCAAGACTTTAAGAATCGCTCTGGAGGCCAAGCATCGAGGAACGTGAGTTATGGTAGTGTTTTTCAGAGACAGAGCCAGAGAATACCTAGTCAACCCACTAGATCAACAGTAAGATCGTAACCAGGTCAGGAGTCCGTTGCTAGTGCAGCCAGGCGAACACCATGCACGAGTTGTGGCAGGAACCATCGGGGTCAGTGTTTGGTGGGTGCCGGTGTATGTTACCAGTGCGGACAGCCAGGACATTTCAAGAAAGATTGTCCGCAGTTGAACATGACAGTTCAGAGAGATCAGGGAGTTGGGTCCCAGATAGTTGAGCAATCGAGAGTTTCAGTGGTTCCAACAGAGGGCAGCAGTGGTGCAAGGCAGAAGGGAGTTGTTGGAAGACCTAGGCAACAGGAAAAGTCTATGCTATGA

mRNA sequence

ATGCCACCACGTACTGGCAGACGACGCCGGCAGAATCAGGACGGGATGCAAGGTTCTGCCCAAGGTCCATCTGTAGGGGAATCTAGTACCCTAAGAGTTCGAGGTGGGGCAGGAAATGAGCAGTTTGCGAGAACAACACAGGAGATAGGAAGGCCAGATAGAGCAGAGCCTAATGATCCAGAAAAGGCATATGGAATTGAACGGCTGAAGAAGTTAGGGGCTACAGTGTTTAAGGGTTCCACAGATCCAGTTGATGCAGAGAACTGGTTGAATATGCTTGAAAAGTGTTTTGATGTGATGAATTGTCCTGAGGAGCGAAAGGTTAGATTGGCCACATTTTTGTTGCAAAAAGAGGCTGAAGGATGGTGGAAATCTATATTAGCAAGGCGCAGTGATGCACGTGCTTTAGACTGGCAGACTTTTAGAGTCATATTCGAAGATAAGTATTATCCCAGCACATACTGCGAAGCCAAGAGGGATGAATTTCTGGGGTTGAAACAAGGATCACTTTCAGTGGCTGAGTATGAGAGGAAGTATACCGAGCTTTCACGGTATGCTGACGTTATTGTGGCTTCTGAGAGTGACAGGTGCCGAAGGTTTGAAAGAGGGTTGCGTTTTGAAATACGTACCCCAGTTACAGCCATTGCTAAGTGGACGAATTTCTCTCAGTTAGTGGAGACTGCCCTTCGTGTGGAGCAGAGTATAACAGAAGAGAAATCAGCAGTGGAGCTTAGTCGTGGGACTTCAACAGCTAGTGGATTTAGAGGCCGTGAGCAGCGGAGGTTCACGCCTGGGATAAATATTTCAAGCCGTCAAGACTTTAAGAATCGCTCTGGAGGCCAAGCATCGAGGAACGTGAGTTATGGTAGTGTTTTTCAGAGACAGAGCCAGAGAATACCTAGTCAACCCACTAGATCAACAGTAAGATCGAACCATCGGGGTCAGTGTTTGGTGGGTGCCGGTGTATGTTACCAGTGCGGACAGCCAGGACATTTCAAGAAAGATTGTCCGCAGTTGAACATGACAGTTCAGAGAGATCAGGGAGTTGGGTCCCAGATAGTTGAGCAATCGAGAGTTTCAGTGGTTCCAACAGAGGGCAGCAGTGGTGCAAGGCAGAAGGGAGTTGTTGGAAGACCTAGGCAACAGGAAAAGTCTATGCTATGA

Coding sequence (CDS)

ATGCCACCACGTACTGGCAGACGACGCCGGCAGAATCAGGACGGGATGCAAGGTTCTGCCCAAGGTCCATCTGTAGGGGAATCTAGTACCCTAAGAGTTCGAGGTGGGGCAGGAAATGAGCAGTTTGCGAGAACAACACAGGAGATAGGAAGGCCAGATAGAGCAGAGCCTAATGATCCAGAAAAGGCATATGGAATTGAACGGCTGAAGAAGTTAGGGGCTACAGTGTTTAAGGGTTCCACAGATCCAGTTGATGCAGAGAACTGGTTGAATATGCTTGAAAAGTGTTTTGATGTGATGAATTGTCCTGAGGAGCGAAAGGTTAGATTGGCCACATTTTTGTTGCAAAAAGAGGCTGAAGGATGGTGGAAATCTATATTAGCAAGGCGCAGTGATGCACGTGCTTTAGACTGGCAGACTTTTAGAGTCATATTCGAAGATAAGTATTATCCCAGCACATACTGCGAAGCCAAGAGGGATGAATTTCTGGGGTTGAAACAAGGATCACTTTCAGTGGCTGAGTATGAGAGGAAGTATACCGAGCTTTCACGGTATGCTGACGTTATTGTGGCTTCTGAGAGTGACAGGTGCCGAAGGTTTGAAAGAGGGTTGCGTTTTGAAATACGTACCCCAGTTACAGCCATTGCTAAGTGGACGAATTTCTCTCAGTTAGTGGAGACTGCCCTTCGTGTGGAGCAGAGTATAACAGAAGAGAAATCAGCAGTGGAGCTTAGTCGTGGGACTTCAACAGCTAGTGGATTTAGAGGCCGTGAGCAGCGGAGGTTCACGCCTGGGATAAATATTTCAAGCCGTCAAGACTTTAAGAATCGCTCTGGAGGCCAAGCATCGAGGAACGTGAGTTATGGTAGTGTTTTTCAGAGACAGAGCCAGAGAATACCTAGTCAACCCACTAGATCAACAGTAAGATCGAACCATCGGGGTCAGTGTTTGGTGGGTGCCGGTGTATGTTACCAGTGCGGACAGCCAGGACATTTCAAGAAAGATTGTCCGCAGTTGAACATGACAGTTCAGAGAGATCAGGGAGTTGGGTCCCAGATAGTTGAGCAATCGAGAGTTTCAGTGGTTCCAACAGAGGGCAGCAGTGGTGCAAGGCAGAAGGGAGTTGTTGGAAGACCTAGGCAACAGGAAAAGTCTATGCTATGA

Protein sequence

MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDPEKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPTRSTVRSNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRPRQQEKSML

Homology

[Close]

BLAST of Pay0019135 vs. ExPASy TrEMBL
Match: A0A5A7U2V7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00630 PE=4 SV=1)

HSP 1 Score: 723.0 bits (1865), Expect = 6.6e-205
Identity = 370/405 (91.36%), Postives = 375/405 (92.59%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDP 60
           MPPRTGRRRRQNQDGMQG  QGPSVGESSTL VRGGAGNEQFARTTQEIGR DRAEP+DP
Sbjct: 1   MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 60

Query: 61  EKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVF+GSTDP DAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120

Query: 121 GWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDARALDWQTFR IFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 121 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180

Query: 181 ELSRYADVIVASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240
           ELSRYADVI+ASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS
Sbjct: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Sbjct: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300

Query: 301 SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQL 360
           SQP RSTVRS                     NHRGQCLVGAGVCYQCGQPGHFKKDCPQL
Sbjct: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 360

Query: 361 NMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRPRQQEK 385
           NMTVQRDQGVGSQ +EQSRVSVVPTEG+SGARQKGVVGRPRQQ K
Sbjct: 361 NMTVQRDQGVGSQTIEQSRVSVVPTEGTSGARQKGVVGRPRQQGK 405

[Close]

BLAST of Pay0019135 vs. ExPASy TrEMBL
Match: A0A5D3BS67 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold509G00050 PE=4 SV=1)

HSP 1 Score: 723.0 bits (1865), Expect = 6.6e-205
Identity = 370/405 (91.36%), Postives = 375/405 (92.59%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDP 60
           MPPRTGRRRRQNQDGMQG  QGPSVGESSTL VRGGAGNEQFARTTQEIGR DRAEP+DP
Sbjct: 39  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 98

Query: 61  EKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVF+GSTDP DAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 99  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 158

Query: 121 GWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDARALDWQTFR IFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 159 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 218

Query: 181 ELSRYADVIVASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240
           ELSRYADVI+ASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS
Sbjct: 219 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 278

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Sbjct: 279 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 338

Query: 301 SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQL 360
           SQP RSTVRS                     NHRGQCLVGAGVCYQCGQPGHFKKDCPQL
Sbjct: 339 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 398

Query: 361 NMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRPRQQEK 385
           NMTVQRDQGVGSQ +EQSRVSVVPTEG+SGARQKGVVGRPRQQ K
Sbjct: 399 NMTVQRDQGVGSQTIEQSRVSVVPTEGTSGARQKGVVGRPRQQGK 443

[Close]

BLAST of Pay0019135 vs. ExPASy TrEMBL
Match: A0A5D3BHI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold115G00450 PE=4 SV=1)

HSP 1 Score: 723.0 bits (1865), Expect = 6.6e-205
Identity = 370/405 (91.36%), Postives = 375/405 (92.59%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDP 60
           MPPRTGRRRRQNQDGMQG  QGPSVGESSTL VRGGAGNEQFARTTQEIGR DRAEP+DP
Sbjct: 39  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 98

Query: 61  EKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVF+GSTDP DAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 99  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 158

Query: 121 GWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDARALDWQTFR IFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 159 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 218

Query: 181 ELSRYADVIVASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240
           ELSRYADVI+ASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS
Sbjct: 219 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 278

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Sbjct: 279 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 338

Query: 301 SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQL 360
           SQP RSTVRS                     NHRGQCLVGAGVCYQCGQPGHFKKDCPQL
Sbjct: 339 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 398

Query: 361 NMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRPRQQEK 385
           NMTVQRDQGVGSQ +EQSRVSVVPTEG+SGARQKGVVGRPRQQ K
Sbjct: 399 NMTVQRDQGVGSQTIEQSRVSVVPTEGTSGARQKGVVGRPRQQGK 443

[Close]

BLAST of Pay0019135 vs. ExPASy TrEMBL
Match: A0A5A7T1Y5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00980 PE=4 SV=1)

HSP 1 Score: 723.0 bits (1865), Expect = 6.6e-205
Identity = 370/405 (91.36%), Postives = 375/405 (92.59%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDP 60
           MPPRTGRRRRQNQDGMQG  QGPSVGESSTL VRGGAGNEQFARTTQEIGR DRAEP+DP
Sbjct: 39  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 98

Query: 61  EKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVF+GSTDP DAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 99  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 158

Query: 121 GWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDARALDWQTFR IFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 159 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 218

Query: 181 ELSRYADVIVASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240
           ELSRYADVI+ASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS
Sbjct: 219 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 278

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Sbjct: 279 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 338

Query: 301 SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQL 360
           SQP RSTVRS                     NHRGQCLVGAGVCYQCGQPGHFKKDCPQL
Sbjct: 339 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 398

Query: 361 NMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRPRQQEK 385
           NMTVQRDQGVGSQ +EQSRVSVVPTEG+SGARQKGVVGRPRQQ K
Sbjct: 399 NMTVQRDQGVGSQTIEQSRVSVVPTEGTSGARQKGVVGRPRQQGK 443

[Close]

BLAST of Pay0019135 vs. ExPASy TrEMBL
Match: A0A5A7UNA3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold73G00100 PE=4 SV=1)

HSP 1 Score: 723.0 bits (1865), Expect = 6.6e-205
Identity = 370/405 (91.36%), Postives = 375/405 (92.59%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDP 60
           MPPRTGRRRRQNQDGMQG  QGPSVGESSTL VRGGAGNEQFARTTQEIGR DRAEP+DP
Sbjct: 250 MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 309

Query: 61  EKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVF+GSTDP DAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 310 EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 369

Query: 121 GWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDARALDWQTFR IFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 370 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 429

Query: 181 ELSRYADVIVASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240
           ELSRYADVI+ASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS
Sbjct: 430 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 489

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Sbjct: 490 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 549

Query: 301 SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQL 360
           SQP RSTVRS                     NHRGQCLVGAGVCYQCGQPGHFKKDCPQL
Sbjct: 550 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 609

Query: 361 NMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRPRQQEK 385
           NMTVQRDQGVGSQ +EQSRVSVVPTEG+SGARQKGVVGRPRQQ K
Sbjct: 610 NMTVQRDQGVGSQTIEQSRVSVVPTEGTSGARQKGVVGRPRQQGK 654

[Close]

BLAST of Pay0019135 vs. NCBI nr
Match: KAA0066849.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 723.0 bits (1865), Expect = 1.4e-204
Identity = 370/405 (91.36%), Postives = 375/405 (92.59%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDP 60
           MPPRTGRRRRQNQDGMQG  QGPSVGESSTL VRGGAGNEQFARTTQEIGR DRAEP+DP
Sbjct: 39  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 98

Query: 61  EKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVF+GSTDP DAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 99  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 158

Query: 121 GWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDARALDWQTFR IFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 159 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 218

Query: 181 ELSRYADVIVASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240
           ELSRYADVI+ASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS
Sbjct: 219 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 278

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Sbjct: 279 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 338

Query: 301 SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQL 360
           SQP RSTVRS                     NHRGQCLVGAGVCYQCGQPGHFKKDCPQL
Sbjct: 339 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 398

Query: 361 NMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRPRQQEK 385
           NMTVQRDQGVGSQ +EQSRVSVVPTEG+SGARQKGVVGRPRQQ K
Sbjct: 399 NMTVQRDQGVGSQTIEQSRVSVVPTEGTSGARQKGVVGRPRQQGK 443

[Close]

BLAST of Pay0019135 vs. NCBI nr
Match: KAA0035455.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK01987.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK03719.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK25877.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 723.0 bits (1865), Expect = 1.4e-204
Identity = 370/405 (91.36%), Postives = 375/405 (92.59%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDP 60
           MPPRTGRRRRQNQDGMQG  QGPSVGESSTL VRGGAGNEQFARTTQEIGR DRAEP+DP
Sbjct: 39  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 98

Query: 61  EKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVF+GSTDP DAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 99  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 158

Query: 121 GWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDARALDWQTFR IFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 159 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 218

Query: 181 ELSRYADVIVASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240
           ELSRYADVI+ASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS
Sbjct: 219 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 278

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Sbjct: 279 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 338

Query: 301 SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQL 360
           SQP RSTVRS                     NHRGQCLVGAGVCYQCGQPGHFKKDCPQL
Sbjct: 339 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 398

Query: 361 NMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRPRQQEK 385
           NMTVQRDQGVGSQ +EQSRVSVVPTEG+SGARQKGVVGRPRQQ K
Sbjct: 399 NMTVQRDQGVGSQTIEQSRVSVVPTEGTSGARQKGVVGRPRQQGK 443

[Close]

BLAST of Pay0019135 vs. NCBI nr
Match: TYK06334.1 (putative polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 723.0 bits (1865), Expect = 1.4e-204
Identity = 370/405 (91.36%), Postives = 375/405 (92.59%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDP 60
           MPPRTGRRRRQNQDGMQG  QGPSVGESSTL VRGGAGNEQFARTTQEIGR DRAEP+DP
Sbjct: 1   MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 60

Query: 61  EKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVF+GSTDP DAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120

Query: 121 GWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDARALDWQTFR IFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 121 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180

Query: 181 ELSRYADVIVASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240
           ELSRYADVI+ASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS
Sbjct: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Sbjct: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300

Query: 301 SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQL 360
           SQP RSTVRS                     NHRGQCLVGAGVCYQCGQPGHFKKDCPQL
Sbjct: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 360

Query: 361 NMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRPRQQEK 385
           NMTVQRDQGVGSQ +EQSRVSVVPTEG+SGARQKGVVGRPRQQ K
Sbjct: 361 NMTVQRDQGVGSQTIEQSRVSVVPTEGTSGARQKGVVGRPRQQGK 405

[Close]

BLAST of Pay0019135 vs. NCBI nr
Match: TYK27507.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 723.0 bits (1865), Expect = 1.4e-204
Identity = 370/405 (91.36%), Postives = 375/405 (92.59%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDP 60
           MPPRTGRRRRQNQDGMQG  QGPSVGESSTL VRGGAGNEQFARTTQEIGR DRAEP+DP
Sbjct: 1   MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 60

Query: 61  EKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVF+GSTDP DAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120

Query: 121 GWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDARALDWQTFR IFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 121 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180

Query: 181 ELSRYADVIVASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240
           ELSRYADVI+ASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS
Sbjct: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Sbjct: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300

Query: 301 SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQL 360
           SQP RSTVRS                     NHRGQCLVGAGVCYQCGQPGHFKKDCPQL
Sbjct: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 360

Query: 361 NMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRPRQQEK 385
           NMTVQRDQGVGSQ +EQSRVSVVPTEG+SGARQKGVVGRPRQQ K
Sbjct: 361 NMTVQRDQGVGSQTIEQSRVSVVPTEGTSGARQKGVVGRPRQQGK 405

[Close]

BLAST of Pay0019135 vs. NCBI nr
Match: KAA0056684.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 723.0 bits (1865), Expect = 1.4e-204
Identity = 370/405 (91.36%), Postives = 375/405 (92.59%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQDGMQGSAQGPSVGESSTLRVRGGAGNEQFARTTQEIGRPDRAEPNDP 60
           MPPRTGRRRRQNQDGMQG  QGPSVGESSTL VRGGAGNEQFARTTQEIGR DRAEP+DP
Sbjct: 250 MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 309

Query: 61  EKAYGIERLKKLGATVFKGSTDPVDAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVF+GSTDP DAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 310 EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 369

Query: 121 GWWKSILARRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDARALDWQTFR IFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 370 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 429

Query: 181 ELSRYADVIVASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240
           ELSRYADVI+ASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS
Sbjct: 430 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 489

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Sbjct: 490 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 549

Query: 301 SQPTRSTVRS---------------------NHRGQCLVGAGVCYQCGQPGHFKKDCPQL 360
           SQP RSTVRS                     NHRGQCLVGAGVCYQCGQPGHFKKDCPQL
Sbjct: 550 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 609

Query: 361 NMTVQRDQGVGSQIVEQSRVSVVPTEGSSGARQKGVVGRPRQQEK 385
           NMTVQRDQGVGSQ +EQSRVSVVPTEG+SGARQKGVVGRPRQQ K
Sbjct: 610 NMTVQRDQGVGSQTIEQSRVSVVPTEGTSGARQKGVVGRPRQQGK 654

The following BLAST results are available for this feature:

BLAST of Pay0019135 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0019135 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U2V7	6.6e-205	91.36	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5D3BS67	6.6e-205	91.36	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold50...	[more]
A0A5D3BHI1	6.6e-205	91.36	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7T1Y5	6.6e-205	91.36	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold43...	[more]
A0A5A7UNA3	6.6e-205	91.36	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold73...	[more]

BLAST of Pay0019135 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0066849.1	1.4e-204	91.36	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0035455.1	1.4e-204	91.36	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1...	[more]
TYK06334.1	1.4e-204	91.36	putative polyprotein [Cucumis melo var. makuwa]	[more]
TYK27507.1	1.4e-204	91.36	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0056684.1	1.4e-204	91.36	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]

BLAST of Pay0019135 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 322..338 e-value: 8.9E-6 score: 35.2
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 322..338 e-value: 1.8E-7 score: 30.9
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 323..338 score: 11.465827
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 110..205 e-value: 1.6E-14 score: 53.9
None	No IPR available	GENE3D	4.10.60.10		coord: 319..385 e-value: 6.8E-8 score: 34.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 361..387
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 269..310
None	No IPR available	PANTHER	PTHR34482:SF4	POLYMERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 80..338
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 80..338
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 307..339

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0019135.1	Pay0019135.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding