Pay0019133 (gene) Melon (Payzawat) v1

Overview


Name	Pay0019133
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Unknown protein
Location	chr03: 21117021 .. 21118733 (+)
RNA-Seq Expression	Pay0019133
Synteny	Pay0019133

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACGAATCTTCCCGGTGATGCTTGTTTGGTTCTCACGTCAGATCCGAAGGCACGCCTCCGTTGGACGGCAGAGCTTCATGAACGACACGTTGACGCTGTCACTCAGCTTGGTGGCAAAGACAGTGAGTTTGTTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAATTGCTTCTTTTTAGTTCTCTATCTGAAATTTGGTCTCTATGTTTGTGCAATGTTTAATTTAATGTGTTAGGATTTTTTTTTCTTCTTTTTTTGCAATGTGTGATTAACCTAGAACTTGTATAACTGCTTAGAACATGACTTCTGAACAATTTTCAATATCTCCAAATTGTTACGAGCAAAGCCACCCACCTTTTAATTCTATGCTCATTTTACTTTTTAAGTTCTACTTTAATTTTGGATGCACATTTGATATATATGAGTTATTAGATTTTGAATGTTTGAGAGAAAAAGTTTGAAGGAAGCCGTTAGAAAATTGGAGGCACAAAAATTTTCAAGCTTGGAAAGGTAATTCCATCCTTGTTAAGTCATCTTCAAGATGGTTAAATATAAGTTTTCTTCATTTTTTTTCTCAATTAACTTTTATTGGGTCCTTACTTGTTGTGCAGTGTACTTTTATATTATTGTTTTGTAAATTTTGGTAGTAGCGAATCAAAATTACCATTTTGTGTATATTGCTCCTGAGGTGTTGCTTAAGAAAGAGTATGGTGAAAAGGTAAATGTTATAGTATAATTATATATATATACATGTGTATCAATATGCCCATTCTATCTTGTGATTTGTTTTAAGGTTGAGATTATTTCTCTTTTTTGGGTCTACCAATGATGCATTTTAGATTGCAGATGTGTGGTCGTGTGGGGTGACCTTATATGTTCTTTGGTTTGTTATTTATTTGTTATAATTAATAGCAAAATTAGATATTGTTATTGGCTACATATGTTTCCTCTGTGCTCCTAAAAAATGGTTGATTTGTTCTTCATGTTGACAACAAGATATTGCTTTGCAATAGGAGCTAACTCAACAACGCCTTTGTCGAATCCTAAGGTACCGTAACTCAAAAATGCATTTTAACTTTTTTCTGGTTTTTTAAACCTATATTGATGGTTTTGTGAAATATATTGATGGTTTTATGAAATATATTGTTGGCTATGTGATAAAACATTTTGGTAGCTTACAATGTGTTTGATGAAATGCCTCAATGAAGCATTTGGTTGATTTTTAATTGATTTTTGTTTGTTTGAATTAGAAAATCAAGGCCAAGGGAGATTTCATGGCTATGGGAGGAAGTTTTGAGAAAAAGAGAATGAAAAATGAATGGTTAGATTTTAAACTTTGATAATGTGTAGGGCCTTTAAGCATTTTTTAGAATTTAGTTGTTACGGTCATACATGTTTAGTGTTAGGTTTTATTTCTAGTAGGGTAGAAACTTCAATCTCCTCTCTTATTGAAAAGAATATATAGTCTTAGGATGTATTTAGGATTGTTTCTCAAGTAATGACTTTTTGGAATGAATGAAAAATCATTTGGATACTTGATTTTATATTCTGCTATGGTTTCTTATATAGCACTTTAAGGATGGCCTTCATCACACTTTCGCTTTCTTGAACAAATCCAGGTTGAACTCAACCAAGTGATGAGTTTATTTTGTAGCTTGAACTCAACCAAACGTGCCATTTGTTTGCATATATATCGTGCCTGA

mRNA sequence

ATGGAACGAATCTTCCCGGTGATGCTTGTTTGGTTCTCACGTCAGATCCGAAGGCACGCCTCCGTTGGACGGCAGAGCTTCATGAACGACACGTTGACGCTGTCACTCAGCTTGGTGGCAAAGACAGAGCTAACTCAACAACGCCTTTGTCGAATCCTAAGGTACCGTAACTCAAAAATGCATTTTAACTTTTTTCTGAAAATCAAGGCCAAGGGAGATTTCATGGCTATGGGAGGAAGTTTTGAGAAAAAGAGAATGAAAAATGAATGCTTGAACTCAACCAAACGTGCCATTTGTTTGCATATATATCGTGCCTGA

Coding sequence (CDS)

ATGGAACGAATCTTCCCGGTGATGCTTGTTTGGTTCTCACGTCAGATCCGAAGGCACGCCTCCGTTGGACGGCAGAGCTTCATGAACGACACGTTGACGCTGTCACTCAGCTTGGTGGCAAAGACAGAGCTAACTCAACAACGCCTTTGTCGAATCCTAAGGTACCGTAACTCAAAAATGCATTTTAACTTTTTTCTGAAAATCAAGGCCAAGGGAGATTTCATGGCTATGGGAGGAAGTTTTGAGAAAAAGAGAATGAAAAATGAATGCTTGAACTCAACCAAACGTGCCATTTGTTTGCATATATATCGTGCCTGA

Protein sequence

MERIFPVMLVWFSRQIRRHASVGRQSFMNDTLTLSLSLVAKTELTQQRLCRILRYRNSKMHFNFFLKIKAKGDFMAMGGSFEKKRMKNECLNSTKRAICLHIYRA

Homology

[Close]

BLAST of Pay0019133 vs. ExPASy TrEMBL
Match: A0A1S3C548 (uncharacterized protein LOC103496562 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496562 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.3e-35
Identity = 86/105 (81.90%), Postives = 86/105 (81.90%), Query Frame = 0


Query: 1   MERIFPVMLVWFSRQIRRHASVGRQSFMNDTLTLSLSLVAKTELTQQRLCRILRYRNSKM 60
           MERIF VMLVWFSRQIRRHASVGRQSFMNDTLTLSLS VAKTELTQQ LC          
Sbjct: 1   MERIFSVMLVWFSRQIRRHASVGRQSFMNDTLTLSLSFVAKTELTQQHLC---------- 60

Query: 61  HFNFFLKIKAKGDFMAMGGSFEKKRMKNECLNSTKRAICLHIYRA 106
              F  KIKAKGDFMAMGGSFEKKRMKNE LNSTKRAICLHIYRA
Sbjct: 61  --PFPKKIKAKGDFMAMGGSFEKKRMKNEWLNSTKRAICLHIYRA 93

[Close]

BLAST of Pay0019133 vs. ExPASy TrEMBL
Match: A0A1S4E176 (uncharacterized protein LOC103496562 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496562 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.2e-30
Identity = 78/105 (74.29%), Postives = 78/105 (74.29%), Query Frame = 0


Query: 1   MERIFPVMLVWFSRQIRRHASVGRQSFMNDTLTLSLSLVAKTELTQQRLCRILRYRNSKM 60
           MERIF VMLVWFSRQIRRHASVGRQSFMNDTLTLSLS VAKT                  
Sbjct: 1   MERIFSVMLVWFSRQIRRHASVGRQSFMNDTLTLSLSFVAKT------------------ 60

Query: 61  HFNFFLKIKAKGDFMAMGGSFEKKRMKNECLNSTKRAICLHIYRA 106
                 KIKAKGDFMAMGGSFEKKRMKNE LNSTKRAICLHIYRA
Sbjct: 61  ------KIKAKGDFMAMGGSFEKKRMKNEWLNSTKRAICLHIYRA 81

[Close]

BLAST of Pay0019133 vs. ExPASy TrEMBL
Match: A0A1S4E180 (uncharacterized protein LOC103496562 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496562 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.5e-29
Identity = 76/95 (80.00%), Postives = 76/95 (80.00%), Query Frame = 0


Query: 1  MERIFPVMLVWFSRQIRRHASVGRQSFMNDTLTLSLSLVAKTELTQQRLCRILRYRNSKM 60
          MERIF VMLVWFSRQIRRHASVGRQSFMNDTLTLSLS VAKTELTQQ LC          
Sbjct: 1  MERIFSVMLVWFSRQIRRHASVGRQSFMNDTLTLSLSFVAKTELTQQHLC---------- 60

Query: 61 HFNFFLKIKAKGDFMAMGGSFEKKRMKNECLNSTK 96
             F  KIKAKGDFMAMGGSFEKKRMKNE LNSTK
Sbjct: 61 --PFPKKIKAKGDFMAMGGSFEKKRMKNEWLNSTK 83

[Close]

BLAST of Pay0019133 vs. NCBI nr
Match: XP_008456692.1 (PREDICTED: uncharacterized protein LOC103496562 isoform X1 [Cucumis melo])

HSP 1 Score: 158.7 bits (400), Expect = 2.8e-35
Identity = 86/105 (81.90%), Postives = 86/105 (81.90%), Query Frame = 0


Query: 1   MERIFPVMLVWFSRQIRRHASVGRQSFMNDTLTLSLSLVAKTELTQQRLCRILRYRNSKM 60
           MERIF VMLVWFSRQIRRHASVGRQSFMNDTLTLSLS VAKTELTQQ LC          
Sbjct: 1   MERIFSVMLVWFSRQIRRHASVGRQSFMNDTLTLSLSFVAKTELTQQHLC---------- 60

Query: 61  HFNFFLKIKAKGDFMAMGGSFEKKRMKNECLNSTKRAICLHIYRA 106
              F  KIKAKGDFMAMGGSFEKKRMKNE LNSTKRAICLHIYRA
Sbjct: 61  --PFPKKIKAKGDFMAMGGSFEKKRMKNEWLNSTKRAICLHIYRA 93

[Close]

BLAST of Pay0019133 vs. NCBI nr
Match: XP_016901979.1 (PREDICTED: uncharacterized protein LOC103496562 isoform X3 [Cucumis melo])

HSP 1 Score: 141.4 bits (355), Expect = 4.6e-30
Identity = 78/105 (74.29%), Postives = 78/105 (74.29%), Query Frame = 0


Query: 1   MERIFPVMLVWFSRQIRRHASVGRQSFMNDTLTLSLSLVAKTELTQQRLCRILRYRNSKM 60
           MERIF VMLVWFSRQIRRHASVGRQSFMNDTLTLSLS VAKT                  
Sbjct: 1   MERIFSVMLVWFSRQIRRHASVGRQSFMNDTLTLSLSFVAKT------------------ 60

Query: 61  HFNFFLKIKAKGDFMAMGGSFEKKRMKNECLNSTKRAICLHIYRA 106
                 KIKAKGDFMAMGGSFEKKRMKNE LNSTKRAICLHIYRA
Sbjct: 61  ------KIKAKGDFMAMGGSFEKKRMKNEWLNSTKRAICLHIYRA 81

[Close]

BLAST of Pay0019133 vs. NCBI nr
Match: XP_016901978.1 (PREDICTED: uncharacterized protein LOC103496562 isoform X2 [Cucumis melo])

HSP 1 Score: 137.9 bits (346), Expect = 5.1e-29
Identity = 76/95 (80.00%), Postives = 76/95 (80.00%), Query Frame = 0


Query: 1  MERIFPVMLVWFSRQIRRHASVGRQSFMNDTLTLSLSLVAKTELTQQRLCRILRYRNSKM 60
          MERIF VMLVWFSRQIRRHASVGRQSFMNDTLTLSLS VAKTELTQQ LC          
Sbjct: 1  MERIFSVMLVWFSRQIRRHASVGRQSFMNDTLTLSLSFVAKTELTQQHLC---------- 60

Query: 61 HFNFFLKIKAKGDFMAMGGSFEKKRMKNECLNSTK 96
             F  KIKAKGDFMAMGGSFEKKRMKNE LNSTK
Sbjct: 61 --PFPKKIKAKGDFMAMGGSFEKKRMKNEWLNSTK 83

The following BLAST results are available for this feature:

BLAST of Pay0019133 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0019133 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C548	1.3e-35	81.90	uncharacterized protein LOC103496562 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4E176	2.2e-30	74.29	uncharacterized protein LOC103496562 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4E180	2.5e-29	80.00	uncharacterized protein LOC103496562 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Pay0019133 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456692.1	2.8e-35	81.90	PREDICTED: uncharacterized protein LOC103496562 isoform X1 [Cucumis melo]	[more]
XP_016901979.1	4.6e-30	74.29	PREDICTED: uncharacterized protein LOC103496562 isoform X3 [Cucumis melo]	[more]
XP_016901978.1	5.1e-29	80.00	PREDICTED: uncharacterized protein LOC103496562 isoform X2 [Cucumis melo]	[more]

BLAST of Pay0019133 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0019133.1	Pay0019133.1	mRNA