Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTTGAGAAAATTGGATAACTTCCCTATGCATAGATATACTCAATACCCACAGTTCGAAATCTTCCTACTGGAGGTATGAGACCGCTTCCTACGGTTCAGGCGCTGTGCAAATTGGTTACACAGCCTTGACATGGTGCAACATCCATGGACTTAGCCATGCGGAGATCTGTGCTAATTACCTCACAGCATTATCTTCTCTGTTCGATTATCTTTTTGATGTAGGAGTCACTGTAATGAAGTTCGTTGGATATGAAACAACTAAGCGAAACGGGTTTTCAGAAATGGTATCTACCGGAAATCCTGTAATGCCTTGGATTCAAAACCATCGCTCCATGGCTCTCATAGCTCAAGCTATCCTTATTCTTTTTGAGGATGTAAGCGATAGAGTGAGTTATGAAGACTCGATGAGAAACATAGCCATTGGATTGAAAGCAGCGGTGGGTTATGTAGGGAATGTAGGACCGACTGATGATTTTTGTGTGGATTTTAACGCTGCTTTCATGATTAAACGAATGCTTGGAAGTTCTCAATCGCTAGGAGCAAGTGTGATGATGGAGTTGATAGGAAACAGAAATGCTTCAGGTCCTGTTGGAGCAGTTCGTAGCTATGTTCGTGAAATCTTGAACTGGGCAGGAATGGATTATTTTGTTTGCATTTATGATACTCTTGTATTACCAAAATCTCCTGTTCTTAAGGATTGTAGAGTTCTTGCAGAAGTTGGAAAATATTGCTGA
mRNA sequence
ATGGCTTTGAGAAAATTGGATAACTTCCCTATGCATAGATATACTCAATACCCACAGTTCGAAATCTTCCTACTGGAGACCGCTTCCTACGGTTCAGGCGCTGTGCAAATTGGTTACACAGCCTTGACATGGTGCAACATCCATGGACTTAGCCATGCGGAGATCTGTGCTAATTACCTCACAGCATTATCTTCTCTGTTCGATTATCTTTTTGATGTAGGAGTCACTGTAATGAAGTTCGTTGGATATGAAACAACTAAGCGAAACGGGTTTTCAGAAATGGTATCTACCGGAAATCCTGTAATGCCTTGGATTCAAAACCATCGCTCCATGGCTCTCATAGCTCAAGCTATCCTTATTCTTTTTGAGGATGTAAGCGATAGAGTGAGTTATGAAGACTCGATGAGAAACATAGCCATTGGATTGAAAGCAGCGGTGGGTTATGTAGGGAATGTAGGACCGACTGATGATTTTTGTGTGGATTTTAACGCTGCTTTCATGATTAAACGAATGCTTGGAAGTTCTCAATCGCTAGGAGCAAGTGTGATGATGGAGTTGATAGGAAACAGAAATGCTTCAGGTCCTGTTGGAGCAGTTCGTAGCTATGTTCGTGAAATCTTGAACTGGGCAGGAATGGATTATTTTGTTTGCATTTATGATACTCTTGTATTACCAAAATCTCCTGTTCTTAAGGATTGTAGAGTTCTTGCAGAAGTTGGAAAATATTGCTGA
Coding sequence (CDS)
ATGGCTTTGAGAAAATTGGATAACTTCCCTATGCATAGATATACTCAATACCCACAGTTCGAAATCTTCCTACTGGAGACCGCTTCCTACGGTTCAGGCGCTGTGCAAATTGGTTACACAGCCTTGACATGGTGCAACATCCATGGACTTAGCCATGCGGAGATCTGTGCTAATTACCTCACAGCATTATCTTCTCTGTTCGATTATCTTTTTGATGTAGGAGTCACTGTAATGAAGTTCGTTGGATATGAAACAACTAAGCGAAACGGGTTTTCAGAAATGGTATCTACCGGAAATCCTGTAATGCCTTGGATTCAAAACCATCGCTCCATGGCTCTCATAGCTCAAGCTATCCTTATTCTTTTTGAGGATGTAAGCGATAGAGTGAGTTATGAAGACTCGATGAGAAACATAGCCATTGGATTGAAAGCAGCGGTGGGTTATGTAGGGAATGTAGGACCGACTGATGATTTTTGTGTGGATTTTAACGCTGCTTTCATGATTAAACGAATGCTTGGAAGTTCTCAATCGCTAGGAGCAAGTGTGATGATGGAGTTGATAGGAAACAGAAATGCTTCAGGTCCTGTTGGAGCAGTTCGTAGCTATGTTCGTGAAATCTTGAACTGGGCAGGAATGGATTATTTTGTTTGCATTTATGATACTCTTGTATTACCAAAATCTCCTGTTCTTAAGGATTGTAGAGTTCTTGCAGAAGTTGGAAAATATTGCTGA
Protein sequence
MALRKLDNFPMHRYTQYPQFEIFLLETASYGSGAVQIGYTALTWCNIHGLSHAEICANYLTALSSLFDYLFDVGVTVMKFVGYETTKRNGFSEMVSTGNPVMPWIQNHRSMALIAQAILILFEDVSDRVSYEDSMRNIAIGLKAAVGYVGNVGPTDDFCVDFNAAFMIKRMLGSSQSLGASVMMELIGNRNASGPVGAVRSYVREILNWAGMDYFVCIYDTLVLPKSPVLKDCRVLAEVGKYC
Homology
BLAST of Pay0019131 vs. ExPASy TrEMBL
Match:
A0A5A7U188 (Acetyl-CoA carboxytransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004580 PE=3 SV=1)
HSP 1 Score: 443.0 bits (1138), Expect = 8.2e-121
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0
Query: 26 ETASYGSGAVQIGYTALTWCNIHGLSHAEICANYLTALSSLFDYLFDVGVTVMKFVGYET 85
ETASYGSGAVQIGYTALTWCNIHGLSHAEICANYLTALSSLFDYLFDVGVTVMKFVGYET
Sbjct: 747 ETASYGSGAVQIGYTALTWCNIHGLSHAEICANYLTALSSLFDYLFDVGVTVMKFVGYET 806
Query: 86 TKRNGFSEMVSTGNPVMPWIQNHRSMALIAQAILILFEDVSDRVSYEDSMRNIAIGLKAA 145
TKRNGFSEMVSTGNPVMPWIQNHRSMALIAQAILILFEDVSDRVSYEDSMRNIAIGLKAA
Sbjct: 807 TKRNGFSEMVSTGNPVMPWIQNHRSMALIAQAILILFEDVSDRVSYEDSMRNIAIGLKAA 866
Query: 146 VGYVGNVGPTDDFCVDFNAAFMIKRMLGSSQSLGASVMMELIGNRNASGPVGAVRSYVRE 205
VGYVGNVGPTDDFCVDFNAAFMIKRMLGSSQSLGASVMMELIGNRNASGPVGAVRSYVRE
Sbjct: 867 VGYVGNVGPTDDFCVDFNAAFMIKRMLGSSQSLGASVMMELIGNRNASGPVGAVRSYVRE 926
Query: 206 ILNWAGMDYFVCIYDTLVLPKSPVLKDCRVLAEVGKYC 244
ILNWAGMDYFVCIYDTLVLPKSPVLKDCRVLAEVGKYC
Sbjct: 927 ILNWAGMDYFVCIYDTLVLPKSPVLKDCRVLAEVGKYC 964
BLAST of Pay0019131 vs. ExPASy TrEMBL
Match:
A0A0A0L6A6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122530 PE=4 SV=1)
HSP 1 Score: 177.2 bits (448), Expect = 8.4e-41
Identity = 91/106 (85.85%), Postives = 95/106 (89.62%), Query Frame = 0
Query: 135 MRNIAIGLKAAVGYVGNVGPTDDFCVDFNAAFMIKRMLGSSQSLGASVMMELIGNRNASG 194
MRN AIGLKAAVGYVGN+GPTDDFCV+FNAAF+IKRMLGSS SL ASVMMELI NRNA G
Sbjct: 1 MRNRAIGLKAAVGYVGNLGPTDDFCVEFNAAFIIKRMLGSSVSLRASVMMELIRNRNARG 60
Query: 195 PVGAVRSYVREILNWAGMDYFVCIYDTLVLPKSPVLKDCRVLAEVG 241
PVGAV S+V EILNWA MD VCIYDTLVLPKS VLKDCRVLAEVG
Sbjct: 61 PVGAVCSHVCEILNWAEMDDMVCIYDTLVLPKSHVLKDCRVLAEVG 106
BLAST of Pay0019131 vs. ExPASy TrEMBL
Match:
A0A7J6DPH8 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_011901 PE=4 SV=1)
HSP 1 Score: 85.9 bits (211), Expect = 2.6e-13
Identity = 62/188 (32.98%), Postives = 97/188 (51.60%), Query Frame = 0
Query: 56 CANYLTALSSLFDYLFDVGVTVMKFVGYETTKRNGFSEMVSTGNPVM--PWIQNHRSMAL 115
CANYL+A++ L V V+ GY + E N + + ++ A+
Sbjct: 85 CANYLSAITIYLPSLVKVVKRVLGMKGYGVIE---LDEKGLDANDIKLEAAVNMDKTAAI 144
Query: 116 IAQAILILFEDVSDRVSYEDSMRNIAIGLKAAVGYVGNV--GPTDDFCVDFNAAFMIKRM 175
I Q ILILF++++++ SY+ +R A LKA V Y G + G +D ++ +A +I +
Sbjct: 145 IGQLILILFKNINEK-SYDTYIRKRAAALKAIVEYHGELIPGCDEDVLLNRESAEIISNV 204
Query: 176 LGSSQSLGASVMMELIGNRNASGPVGAVRSYVREILNWAGMDYFVCIYDTLVLPKSPVLK 235
LG+S L +++M +I N G G V YV I W M+ I+D ++ PKSPVL
Sbjct: 205 LGASCLLRSTIMHAVIANSKHEGSFGEVCGYVMGIAAWTKMNAIKHIFDAILAPKSPVLG 264
Query: 236 DCRVLAEV 240
R+ AEV
Sbjct: 265 VSRLAAEV 268
BLAST of Pay0019131 vs. ExPASy TrEMBL
Match:
A0A803R321 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 85.9 bits (211), Expect = 2.6e-13
Identity = 62/188 (32.98%), Postives = 97/188 (51.60%), Query Frame = 0
Query: 56 CANYLTALSSLFDYLFDVGVTVMKFVGYETTKRNGFSEMVSTGNPVM--PWIQNHRSMAL 115
CANYL+A++ L V V+ GY + E N + + ++ A+
Sbjct: 85 CANYLSAITIYLPSLVKVVKRVLGMKGYGVIE---LDEKGLDANDIKLEAAVNMDKTAAI 144
Query: 116 IAQAILILFEDVSDRVSYEDSMRNIAIGLKAAVGYVGNV--GPTDDFCVDFNAAFMIKRM 175
I Q ILILF++++++ SY+ +R A LKA V Y G + G +D ++ +A +I +
Sbjct: 145 IGQLILILFKNINEK-SYDTYIRKRAAALKAIVEYHGELIPGCDEDVLLNRESAEIISNV 204
Query: 176 LGSSQSLGASVMMELIGNRNASGPVGAVRSYVREILNWAGMDYFVCIYDTLVLPKSPVLK 235
LG+S L +++M +I N G G V YV I W M+ I+D ++ PKSPVL
Sbjct: 205 LGASCLLRSTIMHAVIANSKHEGSFGEVCGYVMGIAAWTKMNAIKHIFDAILAPKSPVLG 264
Query: 236 DCRVLAEV 240
R+ AEV
Sbjct: 265 VSRLAAEV 268
BLAST of Pay0019131 vs. ExPASy TrEMBL
Match:
A0A803R322 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 85.9 bits (211), Expect = 2.6e-13
Identity = 62/188 (32.98%), Postives = 97/188 (51.60%), Query Frame = 0
Query: 56 CANYLTALSSLFDYLFDVGVTVMKFVGYETTKRNGFSEMVSTGNPVM--PWIQNHRSMAL 115
CANYL+A++ L V V+ GY + E N + + ++ A+
Sbjct: 85 CANYLSAITIYLPSLVKVVKRVLGMKGYGVIE---LDEKGLDANDIKLEAAVNMDKTAAI 144
Query: 116 IAQAILILFEDVSDRVSYEDSMRNIAIGLKAAVGYVGNV--GPTDDFCVDFNAAFMIKRM 175
I Q ILILF++++++ SY+ +R A LKA V Y G + G +D ++ +A +I +
Sbjct: 145 IGQLILILFKNINEK-SYDTYIRKRAAALKAIVEYHGELIPGCDEDVLLNRESAEIISNV 204
Query: 176 LGSSQSLGASVMMELIGNRNASGPVGAVRSYVREILNWAGMDYFVCIYDTLVLPKSPVLK 235
LG+S L +++M +I N G G V YV I W M+ I+D ++ PKSPVL
Sbjct: 205 LGASCLLRSTIMHAVIANSKHEGSFGEVCGYVMGIAAWTKMNAIKHIFDAILAPKSPVLG 264
Query: 236 DCRVLAEV 240
R+ AEV
Sbjct: 265 VSRLAAEV 268
BLAST of Pay0019131 vs. NCBI nr
Match:
KAA0048978.1 (acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [Cucumis melo var. makuwa] >TYK17588.1 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [Cucumis melo var. makuwa])
HSP 1 Score: 443.0 bits (1138), Expect = 1.7e-120
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0
Query: 26 ETASYGSGAVQIGYTALTWCNIHGLSHAEICANYLTALSSLFDYLFDVGVTVMKFVGYET 85
ETASYGSGAVQIGYTALTWCNIHGLSHAEICANYLTALSSLFDYLFDVGVTVMKFVGYET
Sbjct: 747 ETASYGSGAVQIGYTALTWCNIHGLSHAEICANYLTALSSLFDYLFDVGVTVMKFVGYET 806
Query: 86 TKRNGFSEMVSTGNPVMPWIQNHRSMALIAQAILILFEDVSDRVSYEDSMRNIAIGLKAA 145
TKRNGFSEMVSTGNPVMPWIQNHRSMALIAQAILILFEDVSDRVSYEDSMRNIAIGLKAA
Sbjct: 807 TKRNGFSEMVSTGNPVMPWIQNHRSMALIAQAILILFEDVSDRVSYEDSMRNIAIGLKAA 866
Query: 146 VGYVGNVGPTDDFCVDFNAAFMIKRMLGSSQSLGASVMMELIGNRNASGPVGAVRSYVRE 205
VGYVGNVGPTDDFCVDFNAAFMIKRMLGSSQSLGASVMMELIGNRNASGPVGAVRSYVRE
Sbjct: 867 VGYVGNVGPTDDFCVDFNAAFMIKRMLGSSQSLGASVMMELIGNRNASGPVGAVRSYVRE 926
Query: 206 ILNWAGMDYFVCIYDTLVLPKSPVLKDCRVLAEVGKYC 244
ILNWAGMDYFVCIYDTLVLPKSPVLKDCRVLAEVGKYC
Sbjct: 927 ILNWAGMDYFVCIYDTLVLPKSPVLKDCRVLAEVGKYC 964
BLAST of Pay0019131 vs. NCBI nr
Match:
XP_031737793.1 (uncharacterized protein LOC105434816 [Cucumis sativus] >XP_031737794.1 uncharacterized protein LOC105434816 [Cucumis sativus] >KGN56529.1 hypothetical protein Csa_010129 [Cucumis sativus])
HSP 1 Score: 177.2 bits (448), Expect = 1.7e-40
Identity = 91/106 (85.85%), Postives = 95/106 (89.62%), Query Frame = 0
Query: 135 MRNIAIGLKAAVGYVGNVGPTDDFCVDFNAAFMIKRMLGSSQSLGASVMMELIGNRNASG 194
MRN AIGLKAAVGYVGN+GPTDDFCV+FNAAF+IKRMLGSS SL ASVMMELI NRNA G
Sbjct: 1 MRNRAIGLKAAVGYVGNLGPTDDFCVEFNAAFIIKRMLGSSVSLRASVMMELIRNRNARG 60
Query: 195 PVGAVRSYVREILNWAGMDYFVCIYDTLVLPKSPVLKDCRVLAEVG 241
PVGAV S+V EILNWA MD VCIYDTLVLPKS VLKDCRVLAEVG
Sbjct: 61 PVGAVCSHVCEILNWAEMDDMVCIYDTLVLPKSHVLKDCRVLAEVG 106
BLAST of Pay0019131 vs. NCBI nr
Match:
KAF4348001.1 (hypothetical protein G4B88_026821 [Cannabis sativa] >KAF4380979.1 hypothetical protein F8388_011901 [Cannabis sativa])
HSP 1 Score: 85.9 bits (211), Expect = 5.3e-13
Identity = 62/188 (32.98%), Postives = 97/188 (51.60%), Query Frame = 0
Query: 56 CANYLTALSSLFDYLFDVGVTVMKFVGYETTKRNGFSEMVSTGNPVM--PWIQNHRSMAL 115
CANYL+A++ L V V+ GY + E N + + ++ A+
Sbjct: 85 CANYLSAITIYLPSLVKVVKRVLGMKGYGVIE---LDEKGLDANDIKLEAAVNMDKTAAI 144
Query: 116 IAQAILILFEDVSDRVSYEDSMRNIAIGLKAAVGYVGNV--GPTDDFCVDFNAAFMIKRM 175
I Q ILILF++++++ SY+ +R A LKA V Y G + G +D ++ +A +I +
Sbjct: 145 IGQLILILFKNINEK-SYDTYIRKRAAALKAIVEYHGELIPGCDEDVLLNRESAEIISNV 204
Query: 176 LGSSQSLGASVMMELIGNRNASGPVGAVRSYVREILNWAGMDYFVCIYDTLVLPKSPVLK 235
LG+S L +++M +I N G G V YV I W M+ I+D ++ PKSPVL
Sbjct: 205 LGASCLLRSTIMHAVIANSKHEGSFGEVCGYVMGIAAWTKMNAIKHIFDAILAPKSPVLG 264
Query: 236 DCRVLAEV 240
R+ AEV
Sbjct: 265 VSRLAAEV 268
BLAST of Pay0019131 vs. NCBI nr
Match:
XP_030506189.1 (uncharacterized protein LOC115721086 [Cannabis sativa] >XP_030506190.1 uncharacterized protein LOC115721086 [Cannabis sativa] >KAF4379621.1 hypothetical protein F8388_023638 [Cannabis sativa])
HSP 1 Score: 85.9 bits (211), Expect = 5.3e-13
Identity = 62/188 (32.98%), Postives = 97/188 (51.60%), Query Frame = 0
Query: 56 CANYLTALSSLFDYLFDVGVTVMKFVGYETTKRNGFSEMVSTGNPVM--PWIQNHRSMAL 115
CANYL+A++ L V V+ GY + E N + + ++ A+
Sbjct: 85 CANYLSAITIYLPSLVKVVKRVLGMKGYGVIE---LDEKGLDANDIKLEAAVNMDKTAAI 144
Query: 116 IAQAILILFEDVSDRVSYEDSMRNIAIGLKAAVGYVGNV--GPTDDFCVDFNAAFMIKRM 175
I Q ILILF++++++ SY+ +R A LKA V Y G + G +D ++ +A +I +
Sbjct: 145 IGQLILILFKNINEK-SYDTYIRKRAAALKAIVEYHGELIPGCDEDVLLNRESAEIISNV 204
Query: 176 LGSSQSLGASVMMELIGNRNASGPVGAVRSYVREILNWAGMDYFVCIYDTLVLPKSPVLK 235
LG+S L +++M +I N G G V YV I W M+ I+D ++ PKSPVL
Sbjct: 205 LGASCLLRSTIMHAVIANSKHEGSFGEVCGYVMGIAAWTKMNAIKHIFDAILAPKSPVLG 264
Query: 236 DCRVLAEV 240
R+ AEV
Sbjct: 265 VSRLAAEV 268
BLAST of Pay0019131 vs. NCBI nr
Match:
KAD2394330.1 (hypothetical protein E3N88_41307 [Mikania micrantha])
HSP 1 Score: 80.5 bits (197), Expect = 2.2e-11
Identity = 64/264 (24.24%), Postives = 118/264 (44.70%), Query Frame = 0
Query: 18 PQFEIFLLETASYGSGAVQIGYTALTWCNIHGLSHAEICANYLTALSSLFDYLFDVGVTV 77
P + +L + + ++ I T++ CN + A YL+ LS F L + V
Sbjct: 37 PTRSVIMLVPTTQAATSIIIN-TSVVECNTCVDCPYQRTAFYLSVLSCFFPSLLPLSKEV 96
Query: 78 MKFVGYETT---------------------KRNGFSEMVSTGNPVMPWIQ---------- 137
++ GY T +R G + + G ++P+
Sbjct: 97 LRDRGYNVTEICDRSPDLYEQQERVLLSRRRREGRNNLCDCGRFLLPYENLQVCVCECKT 156
Query: 138 ------NHRSMALIAQAILILFEDVSDRVSYEDSMRNIAIGLKAAVGYVGNVGPTD-DFC 197
+ S+A+ Q LI+++++ +R SY MR+ A +K G V ++ P + D
Sbjct: 157 KAEPTIGNASLAVFGQLALIIYKNIDER-SYGREMRSWAAAIKHEAGVVCDLVPGEGDIV 216
Query: 198 VDFNAAFMIKRMLGSSQSLGASVMMELIGNRNASGPVGAVRSYVREILNWAGMDYFVCIY 244
+ + A +I R++G+S + ++ + NR+ P+ V +YV EI++W+ M ++
Sbjct: 217 LLVSTAKIIHRIMGNSSEIHVGLLNIFLANRDGVSPLSRVCNYVAEIISWSNMAQLKLVF 276
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7U188 | 8.2e-121 | 100.00 | Acetyl-CoA carboxytransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
A0A0A0L6A6 | 8.4e-41 | 85.85 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122530 PE=4 SV=1 | [more] |
A0A7J6DPH8 | 2.6e-13 | 32.98 | Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_011901 PE=4 SV=1 | [more] |
A0A803R321 | 2.6e-13 | 32.98 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803R322 | 2.6e-13 | 32.98 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KAA0048978.1 | 1.7e-120 | 100.00 | acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [Cucumis melo v... | [more] |
XP_031737793.1 | 1.7e-40 | 85.85 | uncharacterized protein LOC105434816 [Cucumis sativus] >XP_031737794.1 uncharact... | [more] |
KAF4348001.1 | 5.3e-13 | 32.98 | hypothetical protein G4B88_026821 [Cannabis sativa] >KAF4380979.1 hypothetical p... | [more] |
XP_030506189.1 | 5.3e-13 | 32.98 | uncharacterized protein LOC115721086 [Cannabis sativa] >XP_030506190.1 uncharact... | [more] |
KAD2394330.1 | 2.2e-11 | 24.24 | hypothetical protein E3N88_41307 [Mikania micrantha] | [more] |
Match Name | E-value | Identity | Description | |