Pay0018960 (gene) Melon (Payzawat) v1

Overview


Name	Pay0018960
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Ribosome biogenesis regulatory protein
Location	chr02: 4298412 .. 4302215 (+)
RNA-Seq Expression	Pay0018960
Synteny	Pay0018960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTATACCTTTTTACCGGTTAGAATAAGAAAGAAAGCCTGAGGTTTTAGGGTTTCCAATTTCATTATAGAGAACCTCTGTCGTCGGCAACCTAGGTGGTCGGAGCATGGAGATCGAAAATCAGCATCCGTTCCAGATTGACCTTGGTCATCTAATGGCATTCAATCCTCACCATCAGTTTCCTTCAATTCCCCCCTCCAGGTTACTTCTTCTTCGTATTTGGACTCCTGATCATTCTTGGCAACTTGCTATTCTCTCCCTTTTTTTTGAACTTCATTCCTTAGTAGGAAGATGAAAAACAGTTGTTTGTAGCGATTTTTCTTTTCTGAATTTCTCATGTTCTGTCTGTCTCAATGAGGTTGAAGAGCACTTGTGTGGTGTAGTTTGGCTTTGGGATGTAATACTATGCACATTCCCTTGTAGTGTTTTTCTGAACTTTGGTGATGAAGATGGCCCGGGTGTCTGAGTTTTTCCATCTATGGTTGGCATAGACTCTGGGCAGATGACCTGAATAAACCCTAAACCCTTATACCCATGTCTGCATTGGCAACTTCCAAATGTTTCATCCTTGTCAATCCAATTAGAAATATCTAACTTTTGATTCTTAGCTTTCGTGTGTGTTTGGTTTAGCTTTTGAAGTCTTTTTTCTTAAATAAGTCATTTTGGAAACAATTGGATTGTTCTACAGCACTCAAGTAGCTGATTTTTCAGAATTTAATTGAAATAGGTTTTATCTGAAGAGCTCAAATGAAAACAAATTTTTGGAAAACCGCTTTTTTTTGTTTTCTTTCTCTAGTCTATCCAAAGATGGCACTTCATCTGTTTGAGGATTTTTCAAATGTTTAACTTTAGGGTATCTAATTGCTTGTTTTGTTTCAAGAGGATCTCTATTATCTTTGCTTATTTTAGTTATTTATTTTTTTAATTTGATTACTAGGGAGGAACTAATCAGTGAATGCCTGCAAAAGGGAACAGAGTTAGTTCAATCTATTGCCAATGATCTTTTCAACCTGCCTTCAACTGAAGACAGAGACGGCCCCCTTGTGAGGTTGCCTCCACCTACTACGAGATTGCCGAGAGAGAAACCCGTAAGACCTCATGCGACTCTATTGTCTCATTTACTTCTCTTTCAATCTATATGATTTCTTTACTTGGTAACAACTGTCGTTGATTGTACTCTATCCGTAAACAGTGGCTGAAAATATTAATTCTATAGTTTCTGGCTGAGGCGATCTTTTCTTTTTCTTTTCCAGCTTCCAAAGCCGAAACCTCCTACAAAATGGGAACTTTTTGCCCTAAAAAAAGGTCAGTTGTTTGGTATGCAGCCTATGCTAGGGTATTTTTGACAGAGCAATAGGACTTTTCCTTTCCTACGGAAAAAAGGGAAAAAAACAACCGAAAGAAGAAATAGCATTACTAACTTAGTTACTTTGATAACTATCTATTTTTTGTTTATAAATATTGTTTCAAAAATAATTTTGCAGGCATAAAAAAACGTAAAAAAGATAAGAGAGTGTATGATGAACAGACGCATACATGGAAACGTCGCCATGGTTATGATCGTGCAAATGACGAGGATAACATTCCCATAATTGAGGCCAAGATGACTGATGGTAGGGTTTTTTATTATTAATTTTTTTGATAACTATTATTATTTTTTAAAATTTTATAATTAATAGTTCCATTGGTTATCCTAGTTTTGATTTTTTTTTGGTTTCCTTTTTCCTTTTGCAAAATTGCACTCAGTTGGAACATTCAGATAACAAACTGATTATTCTATTTCATACTGGCTGCACTTTATGCCTATGACACATTAAAAGTGCCTACGTGGCTGTCATGTATCACGTTTGATTTGTCTTGCAGAGTCTGGGGAGGATCCATTTGCTGCAAGGCGAGCTGATAAGAAAAAACGAGTTGAAAAGCAAGAAAAGAATCGATTACAAAATCTGAAGCAAGCTGCAAAAGTTGGCGCTCTACCTAGGTTTACCTCTTATGACAGTTTTTTTCCAAACCTCAGTTTATAATTCACGAGTTTGATTGAAATTTTGTGGCTTGATCAATGTTTTGGCCAACTATTAGAGTTGAGACACTGTCCATGTTTTTCTCATGTTTTGCATTATGGTGTTCATCTTCATTCATATCTTCCTTTCCTCTTCATACAATCTATTCTTGATGGTCTCAAATTCACTGTTTCAGCCACATCCAACTAGCTGCCACCGCTTTGCCTATAACGGGAACTCAGGCTGCACCTAAGAAAATCACTAAAGATGAACTTGGAAATGTAGCTGGAATGGCAGCAACTTCAACAGCCAGTGGTGGAAAATTTGACAAGAAGTTTGCAGGAGAAAAACCTGCGAAACATCAAGGAAAATATCGCAAGGTTAATAGAATAAGCCTGTTGACATTCATTTATGCTATGGACTACGATTACTTCATGGCTTGTTTGGATTAACTTTCTAATTGTTTATAAATCTTTTTTGGATTCATAAACACTTATATAAATTCTTAAAAAGTCAATTGAAACACACTCTTATATTTCTCGTAAAATGTTGTGATTCATTTTTTGTGTTTGCATATAGTTTCTGCCTGTTGTGGAGGGAACAGGGATAGGGTCTCGAGAAAGAGAGCAAACTGAGAAAGTTCTTAGCAGATTAATTTCCAAGAATTCACATGAGATTCTCAACGTTAATAAGGTTTGACTGCTGAACTACATATCTCTACTTGTTGAAAATGATATATAGATGCGTATATTTTATTGTTTCATGCAATGCAACTCCTATGGTTTTGAATCTATCGATCTTTTGTACTGGGATGGCATGATATCGAGCATAATATCGTACCTCTTTTTGTTACTTCGTCTTAATTTGGAATAAGTAAATGCCATGCTACTTTTTTTTTAATCTTTGATAAATTTTTTATATTATATTATTTATTTACATGGTTGCAAATGGATCTTGTGATAACTATTCATGTATGATTTATCCTGCAAGCATCAACGATTAGTCTTATCAGACTAGAGAAGAAGGGATTTTCTAATCACTTTAAATTGTTTAGTTTTTTGGAATCATTTTTATTTTATTTTTTAGTAGGAATGAAGATTTGAATCTCTAGATTCTCTACATGTCGTTTACCATTGAGCTGTGCATTTTGGCGTTTTTGGAATTACTTATCTCTAAGCTTATTTTGGTCCTATTTTCAGACTGTCAACATGTTCAATTATTTGTTTGTTCATCTATTTTCATGCGAGTACCAACAATTAAGACGGCTTTTCTAATCTTATTAAATTCTAAGCCTTTTTGGAGTTATTTGATTTCACTAATTCCTTTTAGTACAGTAAAGCGAGAGAATGGAGATTTGGATCTCCAACATTCAAGTGAAAGATTCAAAGGCTTTGACTTCGTGGAATTATCTATCTCTAAGCTTATTTTGGATTTCTCATCTTTATTTTCAGGCTGTCAACATGTATAACGTTAAAAAAGAAAAGAAACAAAGAAACCAACAAGGAAAATCTTCATCGTCGTCGAGCAAGTTGAAGGCAAATAAGAAACTTCAGAAGAAGCCTTTGAAGAAAGGATCTTCAAAGCAAGGAAAGGCAAAATGATCAGATTACATTCTGGTTTAAGTTTTGAATGGATTATGTACCATCATTATCATCATTATTTAGTATTAGTAGTGAAGGAATGTGAGTTATTTAAAAATTTTCTTTTTCCCCAACTCATCTCTCCCATGTGATAAAAAGCAATTTTGTAAAAGTTCATTTCAGTTGTGAATTTTCTCAAAGCTAATTTAGATCCATTTTGCCC

mRNA sequence

CTTTTATACCTTTTTACCGGTTAGAATAAGAAAGAAAGCCTGAGGTTTTAGGGTTTCCAATTTCATTATAGAGAACCTCTGTCGTCGGCAACCTAGGTGGTCGGAGCATGGAGATCGAAAATCAGCATCCGTTCCAGATTGACCTTGGTCATCTAATGGCATTCAATCCTCACCATCAGTTTCCTTCAATTCCCCCCTCCAGGGAGGAACTAATCAGTGAATGCCTGCAAAAGGGAACAGAGTTAGTTCAATCTATTGCCAATGATCTTTTCAACCTGCCTTCAACTGAAGACAGAGACGGCCCCCTTGTGAGGTTGCCTCCACCTACTACGAGATTGCCGAGAGAGAAACCCCTTCCAAAGCCGAAACCTCCTACAAAATGGGAACTTTTTGCCCTAAAAAAAGGCATAAAAAAACGTAAAAAAGATAAGAGAGTGTATGATGAACAGACGCATACATGGAAACGTCGCCATGGTTATGATCGTGCAAATGACGAGGATAACATTCCCATAATTGAGGCCAAGATGACTGATGAGTCTGGGGAGGATCCATTTGCTGCAAGGCGAGCTGATAAGAAAAAACGAGTTGAAAAGCAAGAAAAGAATCGATTACAAAATCTGAAGCAAGCTGCAAAAGTTGGCGCTCTACCTAGCCACATCCAACTAGCTGCCACCGCTTTGCCTATAACGGGAACTCAGGCTGCACCTAAGAAAATCACTAAAGATGAACTTGGAAATGTAGCTGGAATGGCAGCAACTTCAACAGCCAGTGGTGGAAAATTTGACAAGAAGTTTGCAGGAGAAAAACCTGCGAAACATCAAGGAAAATATCGCAAGTTTCTGCCTGTTGTGGAGGGAACAGGGATAGGGTCTCGAGAAAGAGAGCAAACTGAGAAAGTTCTTAGCAGATTAATTTCCAAGAATTCACATGAGATTCTCAACGTTAATAAGGCTGTCAACATGTATAACGTTAAAAAAGAAAAGAAACAAAGAAACCAACAAGGAAAATCTTCATCGTCGTCGAGCAAGTTGAAGGCAAATAAGAAACTTCAGAAGAAGCCTTTGAAGAAAGGATCTTCAAAGCAAGGAAAGGCAAAATGATCAGATTACATTCTGGTTTAAGTTTTGAATGGATTATGTACCATCATTATCATCATTATTTAGTATTAGTAGTGAAGGAATGTGAGTTATTTAAAAATTTTCTTTTTCCCCAACTCATCTCTCCCATGTGATAAAAAGCAATTTTGTAAAAGTTCATTTCAGTTGTGAATTTTCTCAAAGCTAATTTAGATCCATTTTGCCC

Coding sequence (CDS)

ATGGAGATCGAAAATCAGCATCCGTTCCAGATTGACCTTGGTCATCTAATGGCATTCAATCCTCACCATCAGTTTCCTTCAATTCCCCCCTCCAGGGAGGAACTAATCAGTGAATGCCTGCAAAAGGGAACAGAGTTAGTTCAATCTATTGCCAATGATCTTTTCAACCTGCCTTCAACTGAAGACAGAGACGGCCCCCTTGTGAGGTTGCCTCCACCTACTACGAGATTGCCGAGAGAGAAACCCCTTCCAAAGCCGAAACCTCCTACAAAATGGGAACTTTTTGCCCTAAAAAAAGGCATAAAAAAACGTAAAAAAGATAAGAGAGTGTATGATGAACAGACGCATACATGGAAACGTCGCCATGGTTATGATCGTGCAAATGACGAGGATAACATTCCCATAATTGAGGCCAAGATGACTGATGAGTCTGGGGAGGATCCATTTGCTGCAAGGCGAGCTGATAAGAAAAAACGAGTTGAAAAGCAAGAAAAGAATCGATTACAAAATCTGAAGCAAGCTGCAAAAGTTGGCGCTCTACCTAGCCACATCCAACTAGCTGCCACCGCTTTGCCTATAACGGGAACTCAGGCTGCACCTAAGAAAATCACTAAAGATGAACTTGGAAATGTAGCTGGAATGGCAGCAACTTCAACAGCCAGTGGTGGAAAATTTGACAAGAAGTTTGCAGGAGAAAAACCTGCGAAACATCAAGGAAAATATCGCAAGTTTCTGCCTGTTGTGGAGGGAACAGGGATAGGGTCTCGAGAAAGAGAGCAAACTGAGAAAGTTCTTAGCAGATTAATTTCCAAGAATTCACATGAGATTCTCAACGTTAATAAGGCTGTCAACATGTATAACGTTAAAAAAGAAAAGAAACAAAGAAACCAACAAGGAAAATCTTCATCGTCGTCGAGCAAGTTGAAGGCAAATAAGAAACTTCAGAAGAAGCCTTTGAAGAAAGGATCTTCAAAGCAAGGAAAGGCAAAATGA

Protein sequence

MEIENQHPFQIDLGHLMAFNPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPSTEDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFALKKGIKKRKKDKRVYDEQTHTWKRRHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGALPSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGKYRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGKSSSSSSKLKANKKLQKKPLKKGSSKQGKAK

Homology

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BLAST of Pay0018960 vs. ExPASy Swiss-Prot
Match: Q9SH88 (Ribosome biogenesis regulatory protein homolog OS=Arabidopsis thaliana OX=3702 GN=At2g37990 PE=2 SV=2)

HSP 1 Score: 405.6 bits (1041), Expect = 5.4e-112
Identity = 216/320 (67.50%), Postives = 259/320 (80.94%), Query Frame = 0


Query: 2   EIENQHPFQIDLGHLMAFNPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPSTE 61
           E+E +  +Q+D+G+L+AFNP+H+FPS P SR EL+ E L +GT+LVQ IAN LFN PSTE
Sbjct: 4   EMETEQIYQVDVGNLLAFNPNHRFPSAPSSRGELVKEILTEGTKLVQEIANKLFNFPSTE 63

Query: 62  DRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFALKKGIKKRKKDKRVYDEQTHTWKRR 121
             DGP+V+LPPPTT+LPREK +P+PKPPTKWE FALKKGI+KRKK+K V+DEQT+ +KRR
Sbjct: 64  TNDGPIVQLPPPTTKLPREKHIPRPKPPTKWEEFALKKGIQKRKKEKVVWDEQTNQFKRR 123

Query: 122 HGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGALP 181
           HGYDR ND++++PIIEAK +DE G DPFA R  DKKKRV KQEKNRLQNLK A K GALP
Sbjct: 124 HGYDRVNDDNDVPIIEAKESDEPGVDPFAKRLDDKKKRVGKQEKNRLQNLKAAEKAGALP 183

Query: 182 SHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGKY 241
           SH+QLAAT+LPI+GT+A PKKI KDELG+VAG+AATSTASGGKFDKK  GEKP K QGK+
Sbjct: 184 SHVQLAATSLPISGTKAQPKKIGKDELGDVAGLAATSTASGGKFDKKLPGEKPPKKQGKH 243

Query: 242 RKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGKS 301
            K+LPVV G G  + E+EQT  VLS++ SK+SHEILNV KA+NMYNVKKEKK+       
Sbjct: 244 HKYLPVVSGRGDVNAEKEQTNNVLSKIFSKHSHEILNVGKAINMYNVKKEKKK------- 303

Query: 302 SSSSSKLKANKKLQKKPLKK 322
           S  S KLK  K + KKP  K
Sbjct: 304 SGRSDKLKPKKDITKKPANK 316

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BLAST of Pay0018960 vs. ExPASy Swiss-Prot
Match: Q15050 (Ribosome biogenesis regulatory protein homolog OS=Homo sapiens OX=9606 GN=RRS1 PE=1 SV=2)

HSP 1 Score: 131.0 bits (328), Expect = 2.6e-29
Identity = 117/327 (35.78%), Postives = 171/327 (52.29%), Query Frame = 0


Query: 3   IENQHPFQIDLGHLMAF--NPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPST 62
           +  +   Q DLG+L+A   NP        P+ E  +    +  T+L   + N L+ LP+ 
Sbjct: 26  VHKELELQFDLGNLLASDRNPPTGLRCAGPTPEAELQALARDNTQL---LINQLWQLPTE 85

Query: 63  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFALKKGIKKRKKDKRVYDEQTHTWKR 122
              +  + RLP PTTRLPREKPLP+P+P T+W+ FA  KGI+ +KK   V+DE +  W+R
Sbjct: 86  RVEEAIVARLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRR 145

Query: 123 RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 182
           R GY RA D+    +IE     +  ED FA R   KK+RV K E NRL+NL +A K+  L
Sbjct: 146 RWGYQRARDDTKEWLIEVPGNADPLEDQFAKRIQAKKERVAKNELNRLRNLARAHKM-QL 205

Query: 183 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 242
           PS     A  L  TG Q      +K+ELG    +A  STAS G+F ++   EK  +  GK
Sbjct: 206 PS-----AAGLHPTGHQ------SKEELGRAMQVAKVSTASVGRFQERLPKEKVPRGSGK 265

Query: 243 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 302
            RKF P+    G  + E++   ++L  + SK     L+V +A N   +++E ++   + +
Sbjct: 266 KRKFQPLF---GDFAAEKKNQLELLRVMNSKKPQ--LDVTRATNK-QMREEDQEEAAKRR 325

Query: 303 SSSSSSKLKANKKLQKKPLKKGSSKQG 328
             S   K K  ++      K G   QG
Sbjct: 326 KMSQKGKRKGGRQGPGGKRKGGPPSQG 331

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BLAST of Pay0018960 vs. ExPASy Swiss-Prot
Match: Q2KIH4 (Ribosome biogenesis regulatory protein homolog OS=Bos taurus OX=9913 GN=RRS1 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 7.4e-29
Identity = 112/320 (35.00%), Postives = 171/320 (53.44%), Query Frame = 0


Query: 10  QIDLGHLMAF--NPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPSTEDRDGPL 69
           + DLG+L+A   NP        P++E  +    +  T+L   + N L+ LP+    +  +
Sbjct: 33  EFDLGNLLASDRNPPTGLRHAGPTQEAELRALARDNTQL---LINQLWQLPTERVEEALV 92

Query: 70  VRLPPPTTRLPREKPLPKPKPPTKWELFALKKGIKKRKKDKRVYDEQTHTWKRRHGYDRA 129
            RLP P+TRLPREKP+P+P+P T+W+ FA  KGI+ +KK   V+DE +  W+RR GY RA
Sbjct: 93  ARLPEPSTRLPREKPVPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGRWRRRWGYQRA 152

Query: 130 NDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGALPSHIQLA 189
            D+    +IE     +  ED FA R   KK+RV K E NRL+NL +A K+  LPS     
Sbjct: 153 RDDTKEWLIEVPGNADPMEDQFAKRIQAKKERVAKNELNRLRNLARAHKM-QLPS----- 212

Query: 190 ATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGKYRKFLPV 249
           A  +  TG Q      +K+ELG    +A  STAS G+F ++   EK  +  GK RKF P+
Sbjct: 213 AAGMHPTGHQ------SKEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGKKRKFQPL 272

Query: 250 VEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGKSSSSSSK 309
               G  + ER+   ++L  + SK     +++ +A N   +++E ++   + +  S   K
Sbjct: 273 F---GDFAAERKSQLEMLRVMNSKKPQ--MDITRATNK-QMREEDQEEAAKRRKMSQKGK 331

Query: 310 LKANKKLQKKPLKKGSSKQG 328
            K  ++      K G+  QG
Sbjct: 333 RKGGRQGPGSKRKGGTPSQG 331

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BLAST of Pay0018960 vs. ExPASy Swiss-Prot
Match: Q9CYH6 (Ribosome biogenesis regulatory protein homolog OS=Mus musculus OX=10090 GN=Rrs1 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.3e-28
Identity = 114/330 (34.55%), Postives = 173/330 (52.42%), Query Frame = 0


Query: 3   IENQHPFQIDLGHLMAF--NPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPST 62
           +  +   + DLG+L+A   NP        PS E  +    +  T+L   + N L+ LP+ 
Sbjct: 26  VHKELELEFDLGNLLASDRNPPTVLRQAGPSPEAELRALARDNTQL---LINQLWRLPTE 85

Query: 63  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFALKKGIKKRKKDKRVYDEQTHTWKR 122
              +  + RLP P TRLPREKPLP+P+P T+W+ FA  KGI+ +KK   V+DE +  W+R
Sbjct: 86  RVEEAVVARLPEPATRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEASGQWRR 145

Query: 123 RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 182
           R GY RA D+    +IE   + +  ED FA R   KK+RV K E NRL+NL +A K+  +
Sbjct: 146 RWGYKRARDDTKEWLIEVPGSADPMEDQFAKRTQAKKERVAKNELNRLRNLARAHKM-QM 205

Query: 183 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 242
           PS     +  L  TG Q      +K+ELG    +A  STAS G+F ++   EK  +  GK
Sbjct: 206 PS-----SAGLHPTGHQ------SKEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGK 265

Query: 243 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 302
            RKF P+    G  + E++   ++L  + SK     L+V +A N   +++E ++   + +
Sbjct: 266 KRKFQPLF---GDFAAEKKNQLELLRVMNSKKPR--LDVTRATNK-QMREEDQEEAAKRR 325

Query: 303 SSSSSSKLKANKKLQKKPLKKGSSKQGKAK 331
             S   K K  ++      K G   QG+ +
Sbjct: 326 KMSQKGKRKGGRQGPSGKRKGGPPGQGEKR 334

[Close]

BLAST of Pay0018960 vs. ExPASy Swiss-Prot
Match: A1A5P2 (Ribosome biogenesis regulatory protein homolog OS=Rattus norvegicus OX=10116 GN=Rrs1 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.7e-28
Identity = 114/330 (34.55%), Postives = 173/330 (52.42%), Query Frame = 0


Query: 3   IENQHPFQIDLGHLMAF--NPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPST 62
           +  +   + DLG+L+A   NP        PS E  +    +  T+L   + N L+ LP+ 
Sbjct: 26  VHKELELEFDLGNLLASDRNPPTVLRQAGPSPEAELRALARDNTQL---LVNQLWQLPTE 85

Query: 63  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFALKKGIKKRKKDKRVYDEQTHTWKR 122
              +  + RLP P TRLPREKPLP+P+P T+W+ FA  KGI+ +KK   V+DE +  W+R
Sbjct: 86  RVEEAVVARLPEPATRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRR 145

Query: 123 RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 182
           R GY RA D+    +IE   + +  ED FA R   KK+RV K E NRL+NL +A K+  +
Sbjct: 146 RWGYKRARDDTKEWLIEVPGSADPMEDQFAKRIRAKKERVAKNELNRLRNLARAHKM-QM 205

Query: 183 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 242
           PS     +  L  TG Q      +K+ELG    +A  STAS G+F ++   EK  +  GK
Sbjct: 206 PS-----SAGLHPTGHQ------SKEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGK 265

Query: 243 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 302
            RKF P+    G  + E++   ++L  + SK     L+V +A N   +++E ++   + +
Sbjct: 266 KRKFQPLF---GDFAAEKKNQLELLRVMNSKKPQ--LDVTRATNK-QMREEDQEEAAKRR 325

Query: 303 SSSSSSKLKANKKLQKKPLKKGSSKQGKAK 331
             S   K K  ++      K G   QG+ +
Sbjct: 326 KMSQKGKKKGGRQGPSGRRKGGPPSQGEKR 334

[Close]

BLAST of Pay0018960 vs. ExPASy TrEMBL
Match: A0A5A7TFQ4 (Ribosome biogenesis regulatory protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G00350 PE=3 SV=1)

HSP 1 Score: 624.8 bits (1610), Expect = 2.1e-175
Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0


Query: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPST 60
           MEIENQHPFQIDLGHLMAFNPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPST
Sbjct: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPST 60

Query: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFALKKGIKKRKKDKRVYDEQTHTWKR 120
           EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFALKKGIKKRKKDKRVYDEQTHTWKR
Sbjct: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFALKKGIKKRKKDKRVYDEQTHTWKR 120

Query: 121 RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 180
           RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL
Sbjct: 121 RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 180

Query: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240
           PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK
Sbjct: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300
           YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK
Sbjct: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300

Query: 301 SSSSSSKLKANKKLQKKPLKKGSSKQGKAK 331
           SSSSSSKLKANKKLQKKPLKKGSSKQGKAK
Sbjct: 301 SSSSSSKLKANKKLQKKPLKKGSSKQGKAK 330

[Close]

BLAST of Pay0018960 vs. ExPASy TrEMBL
Match: A0A0A0LZY0 (Ribosome biogenesis regulatory protein OS=Cucumis sativus OX=3659 GN=Csa_1G605610 PE=3 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 1.7e-169
Identity = 321/330 (97.27%), Postives = 324/330 (98.18%), Query Frame = 0


Query: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPST 60
           MEIENQHPFQIDLGHLMAFNPHHQFPS+P SRE+L+SECLQKGTELVQSIANDLFNLPST
Sbjct: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSLPSSREDLVSECLQKGTELVQSIANDLFNLPST 60

Query: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFALKKGIKKRKKDKRVYDEQTHTWKR 120
           EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFA KKGIK RKKDKRVYDEQTHTWKR
Sbjct: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKR 120

Query: 121 RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 180
           RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL
Sbjct: 121 RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 180

Query: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240
           PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK
Sbjct: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300
           YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRN QGK
Sbjct: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRN-QGK 300

Query: 301 SSSSSSKLKANKKLQKKPLKKGSSKQGKAK 331
           SSS SSKLK NKKLQKKPLKKGSSKQGKAK
Sbjct: 301 SSSMSSKLKPNKKLQKKPLKKGSSKQGKAK 329

[Close]

BLAST of Pay0018960 vs. ExPASy TrEMBL
Match: A0A1S4DY55 (Ribosome biogenesis regulatory protein OS=Cucumis melo OX=3656 GN=LOC103492493 PE=3 SV=1)

HSP 1 Score: 602.1 bits (1551), Expect = 1.4e-168
Identity = 321/330 (97.27%), Postives = 322/330 (97.58%), Query Frame = 0


Query: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPST 60
           MEIENQHPFQIDLGHLMAFNPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPST
Sbjct: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPST 60

Query: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFALKKGIKKRKKDKRVYDEQTHTWKR 120
           EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFA       +KKDKRVYDEQ HTWKR
Sbjct: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFA-------QKKDKRVYDEQMHTWKR 120

Query: 121 RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 180
           RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL
Sbjct: 121 RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 180

Query: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240
           PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK
Sbjct: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300
           YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK
Sbjct: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300

Query: 301 SSSSSSKLKANKKLQKKPLKKGSSKQGKAK 331
           SSSSSSKLKANKKLQKKPLKKGSSKQGKAK
Sbjct: 301 SSSSSSKLKANKKLQKKPLKKGSSKQGKAK 323

[Close]

BLAST of Pay0018960 vs. ExPASy TrEMBL
Match: A0A6J1F066 (Ribosome biogenesis regulatory protein OS=Cucurbita moschata OX=3662 GN=LOC111440969 PE=3 SV=1)

HSP 1 Score: 556.2 bits (1432), Expect = 9.1e-155
Identity = 294/331 (88.82%), Postives = 314/331 (94.86%), Query Frame = 0


Query: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPST 60
           ME+ENQ PFQIDLG+LMAFNPHHQ+PS+  SRE+L+SECLQKG EL Q IANDLFNLPST
Sbjct: 1   MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPST 60

Query: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFALKKGIKKRKKDKRVYDEQTHTWKR 120
           EDRDGPLVRLPPP+TRLPREKPLPKPKPPTKWELFA K+GIK RKKDK VYD+QT +WKR
Sbjct: 61  EDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKDKIVYDDQTGSWKR 120

Query: 121 RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 180
           RHGYDRANDE+NIPIIEAKMTDE G DPFAARRA+KK RVEKQE+N+LQNLKQAAKVGAL
Sbjct: 121 RHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGAL 180

Query: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240
           PSH+QLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKK AGEKPAKHQGK
Sbjct: 181 PSHVQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300
           YRKFLPVVEGTGIGS+EREQTEKVL+RLISKNSHEILN+NKAVNMYNVKKEKKQRNQ+GK
Sbjct: 241 YRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK 300

Query: 301 SSS-SSSKLKANKKLQKKPLKKGSSKQGKAK 331
           SSS SS+KLK NKKLQKKPLKKGSSK GKAK
Sbjct: 301 SSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK 331

[Close]

BLAST of Pay0018960 vs. ExPASy TrEMBL
Match: A0A6J1HW20 (Ribosome biogenesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC111467179 PE=3 SV=1)

HSP 1 Score: 555.8 bits (1431), Expect = 1.2e-154
Identity = 294/331 (88.82%), Postives = 314/331 (94.86%), Query Frame = 0


Query: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPST 60
           ME+ENQ PFQIDLG+LMAFNPHH+FPS+  SRE+L+SECLQKG EL Q IANDLFNLPST
Sbjct: 1   MEMENQQPFQIDLGNLMAFNPHHKFPSLSSSREDLVSECLQKGAELAQFIANDLFNLPST 60

Query: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFALKKGIKKRKKDKRVYDEQTHTWKR 120
           EDRDGPLVRLPPP+TRLPREKPLPKPKPPTKWELFA K+GIK RKKDK VYD+QT +WKR
Sbjct: 61  EDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKDKIVYDDQTGSWKR 120

Query: 121 RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 180
           RHGYDRANDE+NIPIIEAKMTDE G DPFAARRA+KK RVEKQE+N+LQNLKQAAKVGAL
Sbjct: 121 RHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGAL 180

Query: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240
           PSH+QLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKK AGEKPAKHQGK
Sbjct: 181 PSHVQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300
           YRKFLPVVEGTGIGS+EREQTEKVL+RLISKNSHEILN+NKAVNMYNVKKEKKQRNQ+GK
Sbjct: 241 YRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK 300

Query: 301 SSS-SSSKLKANKKLQKKPLKKGSSKQGKAK 331
           SSS SS+KLK NKKLQKKPLKKGSSK GKAK
Sbjct: 301 SSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK 331

[Close]

BLAST of Pay0018960 vs. NCBI nr
Match: KAA0042254.1 (ribosome biogenesis regulatory protein-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 624.8 bits (1610), Expect = 4.3e-175
Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0


Query: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPST 60
           MEIENQHPFQIDLGHLMAFNPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPST
Sbjct: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPST 60

Query: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFALKKGIKKRKKDKRVYDEQTHTWKR 120
           EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFALKKGIKKRKKDKRVYDEQTHTWKR
Sbjct: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFALKKGIKKRKKDKRVYDEQTHTWKR 120

Query: 121 RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 180
           RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL
Sbjct: 121 RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 180

Query: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240
           PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK
Sbjct: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300
           YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK
Sbjct: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300

Query: 301 SSSSSSKLKANKKLQKKPLKKGSSKQGKAK 331
           SSSSSSKLKANKKLQKKPLKKGSSKQGKAK
Sbjct: 301 SSSSSSKLKANKKLQKKPLKKGSSKQGKAK 330

[Close]

BLAST of Pay0018960 vs. NCBI nr
Match: XP_004149022.1 (ribosome biogenesis regulatory protein homolog [Cucumis sativus] >KGN66432.1 hypothetical protein Csa_007676 [Cucumis sativus])

HSP 1 Score: 605.1 bits (1559), Expect = 3.5e-169
Identity = 321/330 (97.27%), Postives = 324/330 (98.18%), Query Frame = 0


Query: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPST 60
           MEIENQHPFQIDLGHLMAFNPHHQFPS+P SRE+L+SECLQKGTELVQSIANDLFNLPST
Sbjct: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSLPSSREDLVSECLQKGTELVQSIANDLFNLPST 60

Query: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFALKKGIKKRKKDKRVYDEQTHTWKR 120
           EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFA KKGIK RKKDKRVYDEQTHTWKR
Sbjct: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKR 120

Query: 121 RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 180
           RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL
Sbjct: 121 RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 180

Query: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240
           PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK
Sbjct: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300
           YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRN QGK
Sbjct: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRN-QGK 300

Query: 301 SSSSSSKLKANKKLQKKPLKKGSSKQGKAK 331
           SSS SSKLK NKKLQKKPLKKGSSKQGKAK
Sbjct: 301 SSSMSSKLKPNKKLQKKPLKKGSSKQGKAK 329

[Close]

BLAST of Pay0018960 vs. NCBI nr
Match: XP_016900912.1 (PREDICTED: ribosome biogenesis regulatory protein homolog [Cucumis melo])

HSP 1 Score: 602.1 bits (1551), Expect = 3.0e-168
Identity = 321/330 (97.27%), Postives = 322/330 (97.58%), Query Frame = 0


Query: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPST 60
           MEIENQHPFQIDLGHLMAFNPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPST
Sbjct: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPST 60

Query: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFALKKGIKKRKKDKRVYDEQTHTWKR 120
           EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFA       +KKDKRVYDEQ HTWKR
Sbjct: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFA-------QKKDKRVYDEQMHTWKR 120

Query: 121 RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 180
           RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL
Sbjct: 121 RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 180

Query: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240
           PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK
Sbjct: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300
           YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK
Sbjct: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300

Query: 301 SSSSSSKLKANKKLQKKPLKKGSSKQGKAK 331
           SSSSSSKLKANKKLQKKPLKKGSSKQGKAK
Sbjct: 301 SSSSSSKLKANKKLQKKPLKKGSSKQGKAK 323

[Close]

BLAST of Pay0018960 vs. NCBI nr
Match: XP_038878495.1 (ribosome biogenesis regulatory protein homolog [Benincasa hispida])

HSP 1 Score: 582.4 bits (1500), Expect = 2.4e-162
Identity = 306/330 (92.73%), Postives = 318/330 (96.36%), Query Frame = 0


Query: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPST 60
           MEIENQHPFQ+DLG+LMAFNPHH FPS+P SREEL++ECLQKGTELVQ IANDLFNLPST
Sbjct: 1   MEIENQHPFQVDLGNLMAFNPHHHFPSLPSSREELVNECLQKGTELVQFIANDLFNLPST 60

Query: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFALKKGIKKRKKDKRVYDEQTHTWKR 120
           EDRDGPLV+LPPPTTRLPREKPLPKPKPPTKWELFA KKGIKKRKKDKRVYDEQ  TWKR
Sbjct: 61  EDRDGPLVKLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKKRKKDKRVYDEQAGTWKR 120

Query: 121 RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 180
           RHGYDRANDE+NIPIIEAKMTDE GEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL
Sbjct: 121 RHGYDRANDEENIPIIEAKMTDEPGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 180

Query: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240
           PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKK  GEKPAKHQGK
Sbjct: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLTGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300
           YRKFLPVVEGTGIGS+E+EQTEKVL+RLISKNSHEILNV+KAVNMYNVKKEKKQRNQ+GK
Sbjct: 241 YRKFLPVVEGTGIGSQEKEQTEKVLNRLISKNSHEILNVSKAVNMYNVKKEKKQRNQRGK 300

Query: 301 SSSSSSKLKANKKLQKKPLKKGSSKQGKAK 331
           SSS SSKLK NKKLQKKPLKKGSSK GKAK
Sbjct: 301 SSSMSSKLKPNKKLQKKPLKKGSSKHGKAK 330

[Close]

BLAST of Pay0018960 vs. NCBI nr
Match: XP_022933585.1 (ribosome biogenesis regulatory protein homolog [Cucurbita moschata] >XP_022933586.1 ribosome biogenesis regulatory protein homolog [Cucurbita moschata] >XP_022933587.1 ribosome biogenesis regulatory protein homolog [Cucurbita moschata] >KAG6588164.1 Ribosome biogenesis regulatory protein-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 556.2 bits (1432), Expect = 1.9e-154
Identity = 294/331 (88.82%), Postives = 314/331 (94.86%), Query Frame = 0


Query: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPST 60
           ME+ENQ PFQIDLG+LMAFNPHHQ+PS+  SRE+L+SECLQKG EL Q IANDLFNLPST
Sbjct: 1   MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPST 60

Query: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFALKKGIKKRKKDKRVYDEQTHTWKR 120
           EDRDGPLVRLPPP+TRLPREKPLPKPKPPTKWELFA K+GIK RKKDK VYD+QT +WKR
Sbjct: 61  EDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKDKIVYDDQTGSWKR 120

Query: 121 RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 180
           RHGYDRANDE+NIPIIEAKMTDE G DPFAARRA+KK RVEKQE+N+LQNLKQAAKVGAL
Sbjct: 121 RHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGAL 180

Query: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240
           PSH+QLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKK AGEKPAKHQGK
Sbjct: 181 PSHVQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300
           YRKFLPVVEGTGIGS+EREQTEKVL+RLISKNSHEILN+NKAVNMYNVKKEKKQRNQ+GK
Sbjct: 241 YRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK 300

Query: 301 SSS-SSSKLKANKKLQKKPLKKGSSKQGKAK 331
           SSS SS+KLK NKKLQKKPLKKGSSK GKAK
Sbjct: 301 SSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK 331

[Close]

BLAST of Pay0018960 vs. TAIR 10
Match: AT2G37990.1 (ribosome biogenesis regulatory protein (RRS1) family protein )

HSP 1 Score: 405.6 bits (1041), Expect = 3.8e-113
Identity = 216/320 (67.50%), Postives = 259/320 (80.94%), Query Frame = 0


Query: 2   EIENQHPFQIDLGHLMAFNPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPSTE 61
           E+E +  +Q+D+G+L+AFNP+H+FPS P SR EL+ E L +GT+LVQ IAN LFN PSTE
Sbjct: 4   EMETEQIYQVDVGNLLAFNPNHRFPSAPSSRGELVKEILTEGTKLVQEIANKLFNFPSTE 63

Query: 62  DRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFALKKGIKKRKKDKRVYDEQTHTWKRR 121
             DGP+V+LPPPTT+LPREK +P+PKPPTKWE FALKKGI+KRKK+K V+DEQT+ +KRR
Sbjct: 64  TNDGPIVQLPPPTTKLPREKHIPRPKPPTKWEEFALKKGIQKRKKEKVVWDEQTNQFKRR 123

Query: 122 HGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGALP 181
           HGYDR ND++++PIIEAK +DE G DPFA R  DKKKRV KQEKNRLQNLK A K GALP
Sbjct: 124 HGYDRVNDDNDVPIIEAKESDEPGVDPFAKRLDDKKKRVGKQEKNRLQNLKAAEKAGALP 183

Query: 182 SHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGKY 241
           SH+QLAAT+LPI+GT+A PKKI KDELG+VAG+AATSTASGGKFDKK  GEKP K QGK+
Sbjct: 184 SHVQLAATSLPISGTKAQPKKIGKDELGDVAGLAATSTASGGKFDKKLPGEKPPKKQGKH 243

Query: 242 RKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGKS 301
            K+LPVV G G  + E+EQT  VLS++ SK+SHEILNV KA+NMYNVKKEKK+       
Sbjct: 244 HKYLPVVSGRGDVNAEKEQTNNVLSKIFSKHSHEILNVGKAINMYNVKKEKKK------- 303

Query: 302 SSSSSKLKANKKLQKKPLKK 322
           S  S KLK  K + KKP  K
Sbjct: 304 SGRSDKLKPKKDITKKPANK 316

The following BLAST results are available for this feature:

BLAST of Pay0018960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SH88	5.4e-112	67.50	Ribosome biogenesis regulatory protein homolog OS=Arabidopsis thaliana OX=3702 G...	[more]
Q15050	2.6e-29	35.78	Ribosome biogenesis regulatory protein homolog OS=Homo sapiens OX=9606 GN=RRS1 P...	[more]
Q2KIH4	7.4e-29	35.00	Ribosome biogenesis regulatory protein homolog OS=Bos taurus OX=9913 GN=RRS1 PE=...	[more]
Q9CYH6	1.3e-28	34.55	Ribosome biogenesis regulatory protein homolog OS=Mus musculus OX=10090 GN=Rrs1 ...	[more]
A1A5P2	1.7e-28	34.55	Ribosome biogenesis regulatory protein homolog OS=Rattus norvegicus OX=10116 GN=...	[more]

BLAST of Pay0018960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TFQ4	2.1e-175	100.00	Ribosome biogenesis regulatory protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0LZY0	1.7e-169	97.27	Ribosome biogenesis regulatory protein OS=Cucumis sativus OX=3659 GN=Csa_1G60561...	[more]
A0A1S4DY55	1.4e-168	97.27	Ribosome biogenesis regulatory protein OS=Cucumis melo OX=3656 GN=LOC103492493 P...	[more]
A0A6J1F066	9.1e-155	88.82	Ribosome biogenesis regulatory protein OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1HW20	1.2e-154	88.82	Ribosome biogenesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC1114671...	[more]

BLAST of Pay0018960 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042254.1	4.3e-175	100.00	ribosome biogenesis regulatory protein-like protein [Cucumis melo var. makuwa]	[more]
XP_004149022.1	3.5e-169	97.27	ribosome biogenesis regulatory protein homolog [Cucumis sativus] >KGN66432.1 hyp...	[more]
XP_016900912.1	3.0e-168	97.27	PREDICTED: ribosome biogenesis regulatory protein homolog [Cucumis melo]	[more]
XP_038878495.1	2.4e-162	92.73	ribosome biogenesis regulatory protein homolog [Benincasa hispida]	[more]
XP_022933585.1	1.9e-154	88.82	ribosome biogenesis regulatory protein homolog [Cucurbita moschata] >XP_02293358...	[more]

BLAST of Pay0018960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37990.1	3.8e-113	67.50	ribosome biogenesis regulatory protein (RRS1) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 151..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 287..330
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 310..330
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..161
None	No IPR available	PANTHER	PTHR17602:SF5	RIBOSOME BIOGENESIS REGULATORY PROTEIN	coord: 1..319
IPR007023	Ribosomal biogenesis regulatory protein	PFAM	PF04939	RRS1	coord: 8..171 e-value: 2.4E-54 score: 183.6
IPR007023	Ribosomal biogenesis regulatory protein	PANTHER	PTHR17602	RIBOSOME BIOGENESIS REGULATORY PROTEIN	coord: 1..319

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0018960.1	Pay0018960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000447	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0042273	ribosomal large subunit biogenesis
biological_process	GO:0000055	ribosomal large subunit export from nucleus
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0030687	preribosome, large subunit precursor
cellular_component	GO:0005634	nucleus