Pay0018873 (gene) Melon (Payzawat) v1

Overview
NamePay0018873
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionUnknown protein
Locationchr10: 2624313 .. 2624804 (+)
RNA-Seq ExpressionPay0018873
SyntenyPay0018873
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGCTTCAATTCACAAATCCATTTACCAGTATATATATGTGAGTCACAAGTGGATGAAGATCAAAACTGTGTAATGAAAATGGCAGACCAAACCCAACACTTGGTTATGAGTTTTCTCCTCGTCTCTTTACTGATCATCTTCTTCAATACCGTCTCTGCATCAAGTACGCAATCCTCAAACTTTGTTTAATGAAATTACTTCCTTTAAAAATCTTACTTCATCTTAAGTTTCTATATTCCTTATCCACAGGGGCTACATTTATGGTCCACCTTGGTCAAGACTTTCCAGCTTCCCAAGCTGCAAACCAGGTACGTAAATATATGTGTGATTGATTTATAGAAATGATTTGGGCCTGATCGATTTCTTCAATGGCAGAAGAATCAGCCGCCGGAGAATTTGTGGAATGGCAGAATGGATTTGCAGTTCAATGACTATCAAATATTTGGAGCTAACCCTCGCCATACTCCAAAGCCAACAGGGAAAGTTTAA

mRNA sequence

ATGTGCTTCAATTCACAAATCCATTTACCAGTATATATATGTGAGTCACAAGTGGATGAAGATCAAAACTGTGTAATGAAAATGGCAGACCAAACCCAACACTTGGTTATGAGTTTTCTCCTCGTCTCTTTACTGATCATCTTCTTCAATACCGTCTCTGCATCAAGGGCTACATTTATGGTCCACCTTGGTCAAGACTTTCCAGCTTCCCAAGCTGCAAACCAGAAGAATCAGCCGCCGGAGAATTTGTGGAATGGCAGAATGGATTTGCAGTTCAATGACTATCAAATATTTGGAGCTAACCCTCGCCATACTCCAAAGCCAACAGGGAAAGTTTAA

Coding sequence (CDS)

ATGTGCTTCAATTCACAAATCCATTTACCAGTATATATATGTGAGTCACAAGTGGATGAAGATCAAAACTGTGTAATGAAAATGGCAGACCAAACCCAACACTTGGTTATGAGTTTTCTCCTCGTCTCTTTACTGATCATCTTCTTCAATACCGTCTCTGCATCAAGGGCTACATTTATGGTCCACCTTGGTCAAGACTTTCCAGCTTCCCAAGCTGCAAACCAGAAGAATCAGCCGCCGGAGAATTTGTGGAATGGCAGAATGGATTTGCAGTTCAATGACTATCAAATATTTGGAGCTAACCCTCGCCATACTCCAAAGCCAACAGGGAAAGTTTAA

Protein sequence

MCFNSQIHLPVYICESQVDEDQNCVMKMADQTQHLVMSFLLVSLLIIFFNTVSASRATFMVHLGQDFPASQAANQKNQPPENLWNGRMDLQFNDYQIFGANPRHTPKPTGKV
Homology
BLAST of Pay0018873 vs. ExPASy TrEMBL
Match: A0A1S3BEE6 (uncharacterized protein LOC103489129 OS=Cucumis melo OX=3656 GN=LOC103489129 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.3e-57
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0

Query: 1   MCFNSQIHLPVYICESQVDEDQNCVMKMADQTQHLVMSFLLVSLLIIFFNTVSASRATFM 60
           MCFNSQIHLPVYICESQVDEDQNCVMKMADQTQHLVMSFLL+SLLIIFFNTVSASRATFM
Sbjct: 1   MCFNSQIHLPVYICESQVDEDQNCVMKMADQTQHLVMSFLLLSLLIIFFNTVSASRATFM 60

Query: 61  VHLGQDFPASQAANQKNQPPENLWNGRMDLQFNDYQIFGANPRHTPKPTGKV 113
           VHLGQDFPASQAANQKNQPPENLWNGRMDLQFNDYQIFGANPRHTPKPTGKV
Sbjct: 61  VHLGQDFPASQAANQKNQPPENLWNGRMDLQFNDYQIFGANPRHTPKPTGKV 112

BLAST of Pay0018873 vs. ExPASy TrEMBL
Match: A0A5A7SX31 (Putative lipoprotein yfhM OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00360 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 4.3e-40
Identity = 84/85 (98.82%), Postives = 85/85 (100.00%), Query Frame = 0

Query: 28  MADQTQHLVMSFLLVSLLIIFFNTVSASRATFMVHLGQDFPASQAANQKNQPPENLWNGR 87
           MADQTQHLVMSFLL+SLLIIFFNTVSASRATFMVHLGQDFPASQAANQKNQPPENLWNGR
Sbjct: 1   MADQTQHLVMSFLLLSLLIIFFNTVSASRATFMVHLGQDFPASQAANQKNQPPENLWNGR 60

Query: 88  MDLQFNDYQIFGANPRHTPKPTGKV 113
           MDLQFNDYQIFGANPRHTPKPTGKV
Sbjct: 61  MDLQFNDYQIFGANPRHTPKPTGKV 85

BLAST of Pay0018873 vs. ExPASy TrEMBL
Match: A0A0A0KQN6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G605220 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 2.0e-37
Identity = 80/85 (94.12%), Postives = 81/85 (95.29%), Query Frame = 0

Query: 28  MADQTQHLVMSFLLVSLLIIFFNTVSASRATFMVHLGQDFPASQAANQKNQPPENLWNGR 87
           MADQTQHLVMSF LVSLLIIFFNTVSASRAT M+HLGQDFPASQA NQKNQP ENLWNGR
Sbjct: 1   MADQTQHLVMSFFLVSLLIIFFNTVSASRATVMIHLGQDFPASQATNQKNQPLENLWNGR 60

Query: 88  MDLQFNDYQIFGANPRHTPKPTGKV 113
           MDLQFNDYQIFGANPRHTPKPTGKV
Sbjct: 61  MDLQFNDYQIFGANPRHTPKPTGKV 85

BLAST of Pay0018873 vs. ExPASy TrEMBL
Match: B9S8Y1 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0836660 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.0e-04
Identity = 34/84 (40.48%), Postives = 44/84 (52.38%), Query Frame = 0

Query: 25  VMKMADQTQHLVMSFLLVSLLIIFFNTVSASRATFMVHLGQDFPASQAANQKNQPPENLW 84
           ++KM  Q   LV+  L+ S L+   N  S SRA  + H GQ  P+S   N   Q    L 
Sbjct: 3   IIKMLHQ---LVIILLVFSQLLFSLNAASTSRANELFHGGQHVPSSSFENTYLQRMRKLG 62

Query: 85  NGRMDLQFNDYQIFGANPRHTPKP 109
           NGR D++ NDY   G N  HTP+P
Sbjct: 63  NGRKDIEVNDYSESGPNKSHTPEP 83

BLAST of Pay0018873 vs. ExPASy TrEMBL
Match: A0A7N2LBG0 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 5.0e-04
Identity = 34/90 (37.78%), Postives = 47/90 (52.22%), Query Frame = 0

Query: 24  CVMKMADQTQHLVMSFLLVSLLIIFF--NTVSASRATFMVHLGQDFPASQA---ANQKNQ 83
           C+M+MA  T HL++  L++     FF        R   ++H  QD  AS++   A+ K  
Sbjct: 8   CLMRMAGNTLHLLLIILILVFSNFFFLDAVPILPRGRSLLHASQDIVASRSIHRASTKQY 67

Query: 84  PPENLWNGRMDLQFNDYQIFGANPRHTPKP 109
             E L +GR DL+F DY   GAN  HTP P
Sbjct: 68  EEEELTHGRNDLEFTDYPGSGANNHHTPTP 97

BLAST of Pay0018873 vs. NCBI nr
Match: XP_008446367.1 (PREDICTED: uncharacterized protein LOC103489129 [Cucumis melo])

HSP 1 Score: 231.9 bits (590), Expect = 2.7e-57
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0

Query: 1   MCFNSQIHLPVYICESQVDEDQNCVMKMADQTQHLVMSFLLVSLLIIFFNTVSASRATFM 60
           MCFNSQIHLPVYICESQVDEDQNCVMKMADQTQHLVMSFLL+SLLIIFFNTVSASRATFM
Sbjct: 1   MCFNSQIHLPVYICESQVDEDQNCVMKMADQTQHLVMSFLLLSLLIIFFNTVSASRATFM 60

Query: 61  VHLGQDFPASQAANQKNQPPENLWNGRMDLQFNDYQIFGANPRHTPKPTGKV 113
           VHLGQDFPASQAANQKNQPPENLWNGRMDLQFNDYQIFGANPRHTPKPTGKV
Sbjct: 61  VHLGQDFPASQAANQKNQPPENLWNGRMDLQFNDYQIFGANPRHTPKPTGKV 112

BLAST of Pay0018873 vs. NCBI nr
Match: KAA0034426.1 (putative lipoprotein yfhM [Cucumis melo var. makuwa] >TYK17708.1 putative lipoprotein yfhM [Cucumis melo var. makuwa])

HSP 1 Score: 173.7 bits (439), Expect = 8.9e-40
Identity = 84/85 (98.82%), Postives = 85/85 (100.00%), Query Frame = 0

Query: 28  MADQTQHLVMSFLLVSLLIIFFNTVSASRATFMVHLGQDFPASQAANQKNQPPENLWNGR 87
           MADQTQHLVMSFLL+SLLIIFFNTVSASRATFMVHLGQDFPASQAANQKNQPPENLWNGR
Sbjct: 1   MADQTQHLVMSFLLLSLLIIFFNTVSASRATFMVHLGQDFPASQAANQKNQPPENLWNGR 60

Query: 88  MDLQFNDYQIFGANPRHTPKPTGKV 113
           MDLQFNDYQIFGANPRHTPKPTGKV
Sbjct: 61  MDLQFNDYQIFGANPRHTPKPTGKV 85

BLAST of Pay0018873 vs. NCBI nr
Match: KGN51928.1 (hypothetical protein Csa_009059 [Cucumis sativus])

HSP 1 Score: 164.9 bits (416), Expect = 4.1e-37
Identity = 80/85 (94.12%), Postives = 81/85 (95.29%), Query Frame = 0

Query: 28  MADQTQHLVMSFLLVSLLIIFFNTVSASRATFMVHLGQDFPASQAANQKNQPPENLWNGR 87
           MADQTQHLVMSF LVSLLIIFFNTVSASRAT M+HLGQDFPASQA NQKNQP ENLWNGR
Sbjct: 1   MADQTQHLVMSFFLVSLLIIFFNTVSASRATVMIHLGQDFPASQATNQKNQPLENLWNGR 60

Query: 88  MDLQFNDYQIFGANPRHTPKPTGKV 113
           MDLQFNDYQIFGANPRHTPKPTGKV
Sbjct: 61  MDLQFNDYQIFGANPRHTPKPTGKV 85

BLAST of Pay0018873 vs. NCBI nr
Match: KAG7032221.1 (hypothetical protein SDJN02_06264, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 97.8 bits (242), Expect = 6.2e-17
Identity = 51/85 (60.00%), Postives = 61/85 (71.76%), Query Frame = 0

Query: 28  MADQTQHLVMSFLLVSLLIIFFNTVSASRATFMVHLGQDFPASQAANQKNQPPENLWNGR 87
           MA QTQH +M  +L+SLL+      SAS A  M+HLGQDF ASQAA+Q  QP + L N R
Sbjct: 1   MAGQTQHFLMVLILLSLLL------SASGAAIMIHLGQDFSASQAAHQTKQPLQKLLNDR 60

Query: 88  MDLQFNDYQIFGANPRHTPKPTGKV 113
           MDLQ+NDY +  AN RHTPKPTG+V
Sbjct: 61  MDLQYNDYPVSEANHRHTPKPTGRV 79

BLAST of Pay0018873 vs. NCBI nr
Match: KAG6601439.1 (hypothetical protein SDJN03_06672, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 88.2 bits (217), Expect = 4.9e-14
Identity = 46/76 (60.53%), Postives = 55/76 (72.37%), Query Frame = 0

Query: 37  MSFLLVSLLIIFFNTVSASRATFMVHLGQDFPASQAANQKNQPPENLWNGRMDLQFNDYQ 96
           M  +L+SLL+      SAS A  M+HLGQDF ASQAA+QK QP + L N RMDLQ+NDY 
Sbjct: 1   MVLILLSLLL------SASGAAIMIHLGQDFSASQAAHQKKQPLQKLLNDRMDLQYNDYP 60

Query: 97  IFGANPRHTPKPTGKV 113
           +  AN RHTPKPTG+V
Sbjct: 61  VSEANHRHTPKPTGRV 70

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3BEE61.3e-5799.11uncharacterized protein LOC103489129 OS=Cucumis melo OX=3656 GN=LOC103489129 PE=... [more]
A0A5A7SX314.3e-4098.82Putative lipoprotein yfhM OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A0A0KQN62.0e-3794.12Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G605220 PE=4 SV=1[more]
B9S8Y11.0e-0440.48Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0836660 PE=4 SV=1[more]
A0A7N2LBG05.0e-0437.78Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_008446367.12.7e-5799.11PREDICTED: uncharacterized protein LOC103489129 [Cucumis melo][more]
KAA0034426.18.9e-4098.82putative lipoprotein yfhM [Cucumis melo var. makuwa] >TYK17708.1 putative lipopr... [more]
KGN51928.14.1e-3794.12hypothetical protein Csa_009059 [Cucumis sativus][more]
KAG7032221.16.2e-1760.00hypothetical protein SDJN02_06264, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6601439.14.9e-1460.53hypothetical protein SDJN03_06672, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0018873.1Pay0018873.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane