Pay0018830 (gene) Melon (Payzawat) v1

Overview


Name	Pay0018830
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Mitochondrial import receptor subunit TOM7-1-like
Location	chr11: 9257583 .. 9258370 (+)
RNA-Seq Expression	Pay0018830
Synteny	Pay0018830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCGCAACAAGAGGAAGGTTCCAGCATTTTGCAGAGATCAAATTCTCCCATCAATGGCGTCGAAGGTTTCTCTTAGGAGCAAGGGGAAGAGCTCCAAGTCTTCATCCAAGTCAGAGAAATCCGCTACTCAAGCCTTCAAGGAGTGGACTACATGGGCCGTAAAGAAAGCTAAGGTCATCACCCACTACGGCTTTATTCCTCTGGTCATCATCATCGGCATGAACTCCGAGCCTAAGCCTCAGCTCTCCCAACTCCTCAGCCCCGTTTGATCTGATTGCTTTCTTCCATGATGGATCGGGTTTGTTTTATATGGATGTTTTTGTTGGGGGCTAGTTAGCGTATAAATTTTAGGTCAGTTTGAGTATAATGTTCACATGCTTGAACTACAGAAGACATGCAATAGTTTGAGGCGAAAGTTTTGATCTATTTTTTATTTCTTCTCAAATATCTGTTATTACTTCACCGGTATGAATCTTGGTAATACGCTTCGTTTTTTCTGAGTATTGTCTGTTTATTCAAATAATTGAACGGTTTTAGGGTTTATTTCCGCTATCTGATCCGTGATTCCTAAAGACTGTCATGGATTTAAGCATATAAGACTGATATGGGCTGTACTATCAAAAGCCCCATTTTGTAATGCCTGTTTGTCCTGCCTCTTATTTCAAGTTAATAGGAACTGATCAAGGATTTATAGTCACCATTGTACGAGTTGATTCTATTATCGTTCGTTATGTTCTATTATTTAAATCTTGGCTTTAAATTGTGATAATAAAGTGCCATGTCTGAG

mRNA sequence

AACCGCAACAAGAGGAAGGTTCCAGCATTTTGCAGAGATCAAATTCTCCCATCAATGGCGTCGAAGGTTTCTCTTAGGAGCAAGGGGAAGAGCTCCAAGTCTTCATCCAAGTCAGAGAAATCCGCTACTCAAGCCTTCAAGGAGTGGACTACATGGGCCGTAAAGAAAGCTAAGGTCATCACCCACTACGGCTTTATTCCTCTGGTCATCATCATCGGCATGAACTCCGAGCCTAAGCCTCAGCTCTCCCAACTCCTCAGCCCCGTTTGATCTGATTGCTTTCTTCCATGATGGATCGGGTTTGTTTTATATGGATGTTTTTGTTGGGGGCTAGTTAGCGTATAAATTTTAGGTCAGTTTGAGTATAATGTTCACATGCTTGAACTACAGAAGACATGCAATAGTTTGAGGCGAAAGTTTTGATCTATTTTTTATTTCTTCTCAAATATCTGTTATTACTTCACCGGTATGAATCTTGGTAATACGCTTCGTTTTTTCTGAGTATTGTCTGTTTATTCAAATAATTGAACGGTTTTAGGGTTTATTTCCGCTATCTGATCCGTGATTCCTAAAGACTGTCATGGATTTAAGCATATAAGACTGATATGGGCTGTACTATCAAAAGCCCCATTTTGTAATGCCTGTTTGTCCTGCCTCTTATTTCAAGTTAATAGGAACTGATCAAGGATTTATAGTCACCATTGTACGAGTTGATTCTATTATCGTTCGTTATGTTCTATTATTTAAATCTTGGCTTTAAATTGTGATAATAAAGTGCCATGTCTGAG

Coding sequence (CDS)

ATGGCGTCGAAGGTTTCTCTTAGGAGCAAGGGGAAGAGCTCCAAGTCTTCATCCAAGTCAGAGAAATCCGCTACTCAAGCCTTCAAGGAGTGGACTACATGGGCCGTAAAGAAAGCTAAGGTCATCACCCACTACGGCTTTATTCCTCTGGTCATCATCATCGGCATGAACTCCGAGCCTAAGCCTCAGCTCTCCCAACTCCTCAGCCCCGTTTGA

Protein sequence

MASKVSLRSKGKSSKSSSKSEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNSEPKPQLSQLLSPV

Homology

[Close]

BLAST of Pay0018830 vs. ExPASy Swiss-Prot
Match: Q3ECI7 (Mitochondrial import receptor subunit TOM7-2 OS=Arabidopsis thaliana OX=3702 GN=TOM7-2 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 4.5e-16
Identity = 47/77 (61.04%), Postives = 57/77 (74.03%), Query Frame = 0


Query: 1  MASKVSLRSKGK------SSKSSSKSEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIII 60
          MA+K +L+ KGK      SS SSS S  S  + FK+WT W+++KAKV THYGFIPL+III
Sbjct: 1  MAAKSTLKIKGKAKPSKGSSSSSSSSASSKYKVFKDWTNWSLQKAKVATHYGFIPLIIII 60

Query: 61 GMNSEPKPQLSQLLSPV 72
          GMNS+PKP L  LLSPV
Sbjct: 61 GMNSDPKPHLFHLLSPV 77

[Close]

BLAST of Pay0018830 vs. ExPASy Swiss-Prot
Match: Q9ASY8 (Mitochondrial import receptor subunit TOM7-1 OS=Arabidopsis thaliana OX=3702 GN=TOM7-1 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 5.9e-16
Identity = 47/75 (62.67%), Postives = 56/75 (74.67%), Query Frame = 0


Query: 1  MASKVSL---RSKGKSSK-SSSKSEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGM 60
          M S +SL   + KGK SK +SS  +KS     KEWT W++KKAKV+THYGFIPLVI +GM
Sbjct: 1  MESTISLKVNKGKGKGSKGASSSDDKSKFDVVKEWTNWSLKKAKVVTHYGFIPLVIFVGM 60

Query: 61 NSEPKPQLSQLLSPV 72
          NS+PKP L QLLSPV
Sbjct: 61 NSDPKPHLFQLLSPV 75

[Close]

BLAST of Pay0018830 vs. ExPASy Swiss-Prot
Match: O82067 (Mitochondrial import receptor subunit TOM7-1 OS=Solanum tuberosum OX=4113 GN=TOM7-1 PE=3 SV=3)

HSP 1 Score: 81.3 bits (199), Expect = 5.0e-15
Identity = 44/71 (61.97%), Postives = 53/71 (74.65%), Query Frame = 0


Query: 7  LRSKGKSSKSSSKSEKS------ATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNSEP 66
          L+ KGK++K ++ +++         +  KEW TW  KKAKVITHYGFIPLVIIIGMNSEP
Sbjct: 2  LKPKGKNTKKAAAADEDDGAVAVVGKFVKEWGTWTAKKAKVITHYGFIPLVIIIGMNSEP 61

Query: 67 KPQLSQLLSPV 72
          KP LSQLLSPV
Sbjct: 62 KPSLSQLLSPV 72

[Close]

BLAST of Pay0018830 vs. ExPASy TrEMBL
Match: A0A5A7STK0 (Mitochondrial import receptor subunit TOM7-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold465G00280 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.2e-27
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1  MASKVSLRSKGKSSKSSSKSEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNSEP 60
          MASKVSLRSKGKSSKSSSKSEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNSEP
Sbjct: 1  MASKVSLRSKGKSSKSSSKSEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNSEP 60

Query: 61 KPQLSQLLSPV 72
          KPQLSQLLSPV
Sbjct: 61 KPQLSQLLSPV 71

[Close]

BLAST of Pay0018830 vs. ExPASy TrEMBL
Match: A0A5D3BGU9 (Mitochondrial import receptor subunit TOM7-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00780 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.8e-26
Identity = 71/73 (97.26%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 1  MASKVSLRSKGKSSKSSSKS--EKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVSLRSKGKSSKSSSKS  EKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 72
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]

BLAST of Pay0018830 vs. ExPASy TrEMBL
Match: A0A1S3C1D2 (mitochondrial import receptor subunit TOM7-1-like OS=Cucumis melo OX=3656 GN=LOC103495918 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.8e-26
Identity = 71/73 (97.26%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 1  MASKVSLRSKGKSSKSSSKS--EKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVSLRSKGKSSKSSSKS  EKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 72
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]

BLAST of Pay0018830 vs. ExPASy TrEMBL
Match: A0A0A0LN99 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G424720 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 5.0e-26
Identity = 70/73 (95.89%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 1  MASKVSLRSKGKSSKSSSKS--EKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVSLRSKGKSSKSSSKS  EKSATQAFKEWTTWAVKKAKV+THYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVVTHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 72
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]

BLAST of Pay0018830 vs. ExPASy TrEMBL
Match: A0A6J1JHG5 (mitochondrial import receptor subunit TOM7-1-like OS=Cucurbita maxima OX=3661 GN=LOC111485747 PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 7.2e-25
Identity = 68/73 (93.15%), Postives = 69/73 (94.52%), Query Frame = 0


Query: 1  MASKVSLRSKGKSSKSSSKS--EKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVSLRSKGKSSK SSKS  +KS TQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKGSSKSSEDKSTTQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 72
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]

BLAST of Pay0018830 vs. NCBI nr
Match: KAA0032519.1 (mitochondrial import receptor subunit TOM7-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 131.7 bits (330), Expect = 2.5e-27
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1  MASKVSLRSKGKSSKSSSKSEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNSEP 60
          MASKVSLRSKGKSSKSSSKSEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNSEP
Sbjct: 1  MASKVSLRSKGKSSKSSSKSEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNSEP 60

Query: 61 KPQLSQLLSPV 72
          KPQLSQLLSPV
Sbjct: 61 KPQLSQLLSPV 71

[Close]

BLAST of Pay0018830 vs. NCBI nr
Match: XP_008455820.1 (PREDICTED: mitochondrial import receptor subunit TOM7-1-like [Cucumis melo] >TYJ98347.1 mitochondrial import receptor subunit TOM7-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 126.7 bits (317), Expect = 7.9e-26
Identity = 71/73 (97.26%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 1  MASKVSLRSKGKSSKSSSKS--EKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVSLRSKGKSSKSSSKS  EKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 72
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]

BLAST of Pay0018830 vs. NCBI nr
Match: XP_004151870.1 (mitochondrial import receptor subunit TOM7-1 [Cucumis sativus])

HSP 1 Score: 126.3 bits (316), Expect = 1.0e-25
Identity = 70/73 (95.89%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 1  MASKVSLRSKGKSSKSSSKS--EKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVSLRSKGKSSKSSSKS  EKSATQAFKEWTTWAVKKAKV+THYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVVTHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 72
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]

BLAST of Pay0018830 vs. NCBI nr
Match: KAE8652313.1 (hypothetical protein Csa_022175 [Cucumis sativus])

HSP 1 Score: 126.3 bits (316), Expect = 1.0e-25
Identity = 70/73 (95.89%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 1  MASKVSLRSKGKSSKSSSKS--EKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVSLRSKGKSSKSSSKS  EKSATQAFKEWTTWAVKKAKV+THYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKSSSKSSEEKSATQAFKEWTTWAVKKAKVVTHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 72
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]

BLAST of Pay0018830 vs. NCBI nr
Match: XP_038879584.1 (mitochondrial import receptor subunit TOM7-1-like [Benincasa hispida])

HSP 1 Score: 124.0 bits (310), Expect = 5.1e-25
Identity = 69/73 (94.52%), Postives = 70/73 (95.89%), Query Frame = 0


Query: 1  MASKVSLRSKGKSSKSSSKS--EKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60
          MASKVSLRSKGKSSK SSKS  EKSATQ+FKEWTTWAVKKAKVITHYGFIPLVIIIGMNS
Sbjct: 1  MASKVSLRSKGKSSKGSSKSSEEKSATQSFKEWTTWAVKKAKVITHYGFIPLVIIIGMNS 60

Query: 61 EPKPQLSQLLSPV 72
          EPKPQLSQLLSPV
Sbjct: 61 EPKPQLSQLLSPV 73

[Close]

BLAST of Pay0018830 vs. TAIR 10
Match: AT1G64220.1 (translocase of outer membrane 7 kDa subunit 2 )

HSP 1 Score: 84.7 bits (208), Expect = 3.2e-17
Identity = 47/77 (61.04%), Postives = 57/77 (74.03%), Query Frame = 0


Query: 1  MASKVSLRSKGK------SSKSSSKSEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIII 60
          MA+K +L+ KGK      SS SSS S  S  + FK+WT W+++KAKV THYGFIPL+III
Sbjct: 1  MAAKSTLKIKGKAKPSKGSSSSSSSSASSKYKVFKDWTNWSLQKAKVATHYGFIPLIIII 60

Query: 61 GMNSEPKPQLSQLLSPV 72
          GMNS+PKP L  LLSPV
Sbjct: 61 GMNSDPKPHLFHLLSPV 77

[Close]

BLAST of Pay0018830 vs. TAIR 10
Match: AT5G41685.1 (Mitochondrial outer membrane translocase complex, subunit Tom7 )

HSP 1 Score: 84.3 bits (207), Expect = 4.2e-17
Identity = 47/75 (62.67%), Postives = 56/75 (74.67%), Query Frame = 0


Query: 1  MASKVSL---RSKGKSSK-SSSKSEKSATQAFKEWTTWAVKKAKVITHYGFIPLVIIIGM 60
          M S +SL   + KGK SK +SS  +KS     KEWT W++KKAKV+THYGFIPLVI +GM
Sbjct: 1  MESTISLKVNKGKGKGSKGASSSDDKSKFDVVKEWTNWSLKKAKVVTHYGFIPLVIFVGM 60

Query: 61 NSEPKPQLSQLLSPV 72
          NS+PKP L QLLSPV
Sbjct: 61 NSDPKPHLFQLLSPV 75

The following BLAST results are available for this feature:

BLAST of Pay0018830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3ECI7	4.5e-16	61.04	Mitochondrial import receptor subunit TOM7-2 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9ASY8	5.9e-16	62.67	Mitochondrial import receptor subunit TOM7-1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
O82067	5.0e-15	61.97	Mitochondrial import receptor subunit TOM7-1 OS=Solanum tuberosum OX=4113 GN=TOM...	[more]

BLAST of Pay0018830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7STK0	1.2e-27	100.00	Mitochondrial import receptor subunit TOM7-1-like OS=Cucumis melo var. makuwa OX...	[more]
A0A5D3BGU9	3.8e-26	97.26	Mitochondrial import receptor subunit TOM7-1-like OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3C1D2	3.8e-26	97.26	mitochondrial import receptor subunit TOM7-1-like OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A0A0LN99	5.0e-26	95.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G424720 PE=3 SV=1	[more]
A0A6J1JHG5	7.2e-25	93.15	mitochondrial import receptor subunit TOM7-1-like OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of Pay0018830 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032519.1	2.5e-27	100.00	mitochondrial import receptor subunit TOM7-1-like [Cucumis melo var. makuwa]	[more]
XP_008455820.1	7.9e-26	97.26	PREDICTED: mitochondrial import receptor subunit TOM7-1-like [Cucumis melo] >TYJ...	[more]
XP_004151870.1	1.0e-25	95.89	mitochondrial import receptor subunit TOM7-1 [Cucumis sativus]	[more]
KAE8652313.1	1.0e-25	95.89	hypothetical protein Csa_022175 [Cucumis sativus]	[more]
XP_038879584.1	5.1e-25	94.52	mitochondrial import receptor subunit TOM7-1-like [Benincasa hispida]	[more]

BLAST of Pay0018830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64220.1	3.2e-17	61.04	translocase of outer membrane 7 kDa subunit 2	[more]
AT5G41685.1	4.2e-17	62.67	Mitochondrial outer membrane translocase complex, subunit Tom7	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012621	Mitochondrial import receptor subunit TOM7	PFAM	PF08038	Tom7	coord: 29..68 e-value: 2.1E-17 score: 62.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR34944	MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM7	coord: 1..71
None	No IPR available	PANTHER	PTHR34944:SF2	MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM7	coord: 1..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0018830.1	Pay0018830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030150	protein import into mitochondrial matrix
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005742	mitochondrial outer membrane translocase complex