Pay0018724 (gene) Melon (Payzawat) v1

Overview


Name	Pay0018724
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	RNA pseudouridine synthase 6, chloroplastic-like
Location	chr12: 23745411 .. 23756249 (-)
RNA-Seq Expression	Pay0018724
Synteny	Pay0018724

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTCTCTCTGGTGGCCGCCCATGGTTGTCGTGGCCTCAGTACATCACTTACCCTGCTGCGCGAAGTGGCGAGAACTCGTGCTAATCTCAGTGCTCCCATTTCCACCACTTGCTTTACTGCTCGGCGTTCTTTTAGTTTGAATAGTAGCGCGTTCCCTTGTGAATCCTCAACAACAGACGTGAACGTTACACAAACTGCTACTAATTCTGCAGAAAATGGGTATTGCTAATTTTCTTTCTCATACCTTCTTGTTTACTAGTTTGATTGCTAGTTTGAATGGGAATACTGTTGCTTAATTATGTTTTAATAATAGTGTAAACGTGAGCTTAAGACTTATGTGAGTTGTTTGAATGTTTTTGTCAATGGCGTGGTGGGAGATTTCATCTTTGGTCATTCCAAGATTTATACTTTATGCATTAGGATCTTGTTTTTCTATGTGTATTGCTTGTATTGTGAGAAAAGTTGAAGAAAATAGCAAAATTGAAGGTTGAGGAAAAAAGGGAAAGAGAAAAGAAAATCCATGGCTGATGGCTCAAACTTTATATGTTATATATGGACTATGAATCTCGAGCATTGAATCCTTCTCCACCGGTTAGCACTTGAAAAACTCGTAGCTGTCGTCAAAACTTACCTTTTAGCAGCCCCAAACTTTCAATTTTGCCTTCTACTGTCAGATAAAGAAGAATAAAAAGGTTTCCTGGCACCTTTGCTGATTACTCTGTTAGATGCTTGATGCACTTGCAATAATCATGGATTCATGATTTGTTATTGGATTTTTTCGTTCTCCGAACCTCTGGTATCGATTCCCTTTTTATGATTCCTTTAGGATTTAGCATCCTCCGACTGAAATTAATTTCAGGTATCCTGAATATCATCGTTTGCTTCCATGTACTTCATTCAATGCCCCACCACGAGTTGAACATCTGGTCGTTTTGGAAGGGGGACCTGTTATGGAATACATCTCTAAATCCTTGGATCTTCCTCCTATGTAAGTTCTATCTTTTTTGTTGATTATGCAACATAGTATTAAGTATCCCATGTAAGTATTGAATTTAGTTTCATTTTTTGAAGGTATGTTGCAGATCTCATTCATTTTGGTGCAGTATATTATGCCCTAGTATGCCCACAGCCTCCGCCAACTGCATCCTCCGAGGAAATTAGACTATTCAAAAAATTTACACAACCATCATTTTTGATAGGGCGAAAATCTATCAAGGGGAAAACCTTGAGAGAAGCACAGAAGACTTTCCGGATAACTCATATCGATGAGTTTGTTGAAGTTGGAACATACTTGCGTGTTTATGTGCATCCCAAACGCTTTCCAAGGTGAAATGAACTACATGTTTTTCTTTTCAAAAGTAAAATAATGTTCATGATGGAATGATGCTAGTGAAAATTTATAATCAATCAGGTGCTATGAAATTGATTGGAAATCGAGAATTATCGCTGTGACAGATTCCTATGTGGTTTTGGACAAACCTGCTGGTACATCGGTCTGTGGTTTGAACGCTTGAACCATTAATCTCTGGCTTGAGGAATTATTTGCATTGCCTTCTATTTGTGGTGACTGTTGGTAGTTGCATTGTTTCTTCCTGTAAACATTCTGCAAATTTTTATCCATAATAGTATATGCATTTTGGTAATATGGAATTTACCTATGTAGAACTGATTACGTAAATAATAACGCTTGTAGAGAACGACACATTTTATTTGCATCAGTACCATCTAGCGGACATTCATTTTTTAGCTGTTAAGAATTGAAATTGTTCTGTCAGGTTGGAGGCACTACTAACAACATCGAAGAAACTTGCGTAACCTTTGCAACTCGTGCTTTAGGATTAACATCTCCTTTGTGGACTACCCATCAGATTGACAACTGCACCGAGGGCTGGTAATGATGTTTCTTATAGAGATGCTCATGTCTAAAGTAATGCCTCTCTTCAAAATACTTGTTTTCAATCATTTACACTTTTCTGCAGCGTCATTCTTGCTAGGACAAAAGAATATTGCTCCATCTTCCATCGTAAAATCAGAGTAAGTTTCATGGTCTTATTTCTCGTGTTAGACCATTGCAATTATTATTTTTTTTTTTTTTGGGGGGGGGGGGGGGGTGTGGGGATCTTCAAATCTCTGTTCTTTCACTCATTTTCCAGTCTACCATGTGCTTTGAATATGAAGTAGTTAAATATTTCCACATATCTTCTTCATTCTCACAATACTAAAAACTAAAATATAAGAATGCTCCTATTATTCTCTCCCTAAATATGAAGTCTTACCTCTATGATAAACAGGCACCAAGGGAACGAGAGTGAAAACGAGTCACAAACATTACATTTGAGATTTTTATTTTTAAGCACTTTGCAACAAGGGTAAGTGAATAAGAGGAAATTAAAATGGATTTCTACTGTGATATATATGTTCATGATAAACAAAGATGCACAAGCTGACAAGTTATTTTATTTTTAATGGTCTTGGTAGAATATCCATTATACATATTTGAAATTTTAGTAAAGTTGTTTGTGTTGATGCTCTTCATTTCTTAATTTGATAGTAATGCTTCACAAATTTTTCTTTATAGGAGAAAAAGGTTATGAAGCTTTATCTTGCTCTTGCTGCTGTTCCCCTGCCAAAGGGAATAATGACACACTATATGCGGCCAATTAATTTGGCTCCTAGACTCGTTTCAAGAGGCAAGTTTCACAATCAAGCATTCAAATAATTATTGGATATTGCTTTGAACTATTTGTTACAATTTCTTATATCGGGGATCATATATCTACAGTTTGATTATTGATTTGCAGCCACAAACTCAAGCACCTAGAAAATCAGCCTTAACTATTCTTCCAGCAAATTAACATGCAAAAGTTATTTATATTTTCAACTCCCTCCCAACCTGATACCTAGGATGGACACCTCAACCTTCAACCCTGACCACATGTGTATCCGTACCAAGGTGTGATAAGCAGTTTACGTCTTTTGGTCACTTTAAACATCTTCTTGCAGATTGTATTGATGGATGGAACTTGTGTCAGCTTGAGGTGTTGGAATGCAGAGAGGTTTCATGGCCAGATGCTGATATTGAAGCAAAATACAGTATTGAAGATTGTGGGTGGCCCTCCAAAAAGAAAGCATTTGAATGTAAAATCAACCTCTTGACTGGTCGGACACATCAGGTTCTTAGAGTAGTAGTCTTTCTGTTTCTGCAATCGTCTTTGTTATTTTGAAACCATCTTCAGAAACTCTTGCATTCATTGTTCTTAAAATAGACACGATATTTCCTGATGATGCAGATTCGAGCACAACTGGCTGATTATGGAGCACCATTGGTTGGTGATTCCATCTACATGCCTGCAGCAGTTGCAGAGATGGCTAATCCTGGGTTGAATCCATTTGGAAAATGTAAGAAAGAGTATACAAGCGAAGAAGATAAAGAAAATGCAGTGGCAGAGTGGATTGCTCTTCACGGAAAAGAACCAGCCGTTGCTATTGGACTGCAGGCTTATGAGATTTCATGGGATTCAGGGAAGCACATTTACAATGCTGGTACTCCATGGTGGAGGCAGGAACAGTTATAGCTCGATATCGACTCCAAGCCATCATTTTGCATTCGCCAACATTCTCCAAATCTGCAAGGTTATTTCTACCACTCACACATAAAATACATAAAATAGTTGAGAAAGATTCTAGATTTGTTTGGATTGACTTTCTAAATGCTCAATGACACTTTTTTGAACACTTGGAAAATCAACCTAAACATGCCTGTTTAGTATTTTGTATTGCTTTAAAGTCAAGTTTACTATTTACAATTATATCTCAACCATCTATAACCAGCTTGGTATAGAAAGTTTAGGAACGAAAGTAACAACATTCAATCATCAAATTTGTCGTGTACAGGCAATTACATTAATAATTCTCATATAACTCAGTGGTGCTCCCTTGCTTAGATCACTTTCCTTGACGCAGCTGCAATGACATTGTGACACATCAAAGTTTGGAAAATGATTTGGAGTTCTCTTCAGAGTGGGATGATAATCTTCAGGTAAAGCCCAAACCTTTCATTTTATATATCCATTCAGCCATTCAAATTTGTCCAGCAAAGACTACCCTCTCACGTATGCTCCTTCTCTGAGCAAGCACCACATTATATACTATCGGGACAAGCTGTCAATTCAACCATGGCCACACAAAGAGAAGCTCTGGTTTTCAATTGGACCATTGGATGGATATAGTTAAACTCAAAATTTTGTTTCTACAGATACTCTATGCCTCTGTGGATGTCATAAAGTTCGATGTTATATCTATGAATTCAAAAGTATAGTCTATGAGTGGTGTCCCTCGAAGCATTAGATCTTTGTTGGGGCTAAATCCCTTTGTCTAAAAATTTATTCGGTAATGAAGTTGATGCACTACGGTTCCCTATATGAACTGTTAGAAGGATATGGAAAAAAATTGCATACACCTTAGAAACCACCTAATACAAAGATATAAATCTAAAATAATTTTCTTTCCTAATTATTATAAATGACAAAACTAAAAAAAAGAAACAAACAAAATTTCAGTTTTTATTGATGTTTATTATAGAAAAATTTTAAAATTTTATTATATTTTATAAATATTTTTGTGCGATTTTGAGAATGTTATTAATTTTCTTTGATGTCTCTGTTAAAATTTATGGGTTGATCAAATTTTTTAATTATTATTTTTTACTAATTTAGCCCTCCCTCAAAATAGTTAATTGCTCCAGTGAAATCATTCTCTAGAAATTACCATTCTCTCAAAATGAAATTTTGAATTTTTAGGTTATGGATGGACAATTTTTTAATTTACCATAAAAAAAAATTAAAATACAATTTGGCCTCTCTACATGAATTTGTTTAATATCGTGGTCCGTTTGGATTGGCTTAAAGAAAAAATATTTTTTTAAAAAAAAATTATTTTTGAAAATACACCTTTGAAAATAGTTTCAAGTAGCTTCCAAAAACTTTAATTTTTTTAATACAATTTTTAAATAGTCCCATTATTTTTAAATACAATTTTGATCTCTTTATATAAATTCGTTTAATACTAGTCTTCGTGTTCTTAGATGTTTAATTTTAGATATCCCTAAACCTTATAAAAATTATTTTCAATAATAAAATTATAAAAAATATTTACAAATACAGTTACTAACTATTATTTTAATTTATCACAATCACTGATACAAAATGTTAAGGGAAATTGCATAAGATGACAAAAAATAAAAAAAAAACTGCTCATAGCATCTATTTTTTACATATTACAAATTTGACAAATATGATGACTATAGACGGTTATTGAAGGGTTATCATATACATTCTTAAATTTGCTATTTTTACAATTTAGAAAATGTAGTGATATAGATTTTATTTTCATAATTTTTTTTTGCTATTTTTGCAAAAGCTGGAATATTAAATTGTAAGGATGTATTGAAAATGAAAAGTAAAATCTTCTGTTTAATTTAATATAATTTTACTATATTTAAAAAAATTAATCAATAAACGTATAAAATAATTTATTTGTAAATTTTGGACGAGGCCGAAATTTAGGATAGCTATAAGCCTATGGCATCATTTGGGTGTCATCAGTCCATCCCAGCTCCAAAGACTCCAAAGGATGCTGGCTTCCATGAATATAGCTCTGGTGGCCACCCATGGTTGCCGTGGCCTCGGTAGTACATCACTATCCCTGCTGCGCACACTGGCAAGAACTCGTGCTAGTCCCAATGCTGCCAGTTGCTGCGATTACTTTGCTCCTCGGCGTTCTTTTAGTTCGATTAGCAGCGCATTCCCTTGTAAATCCTCAATAACAGATGTTACAGTCACAAAAACTGCAACTGATTCTGCAGAAAATGGGTGCCGCTAATTTTCTTTTTCTTATTATACCTTCTTGTTTATTAGTTTGATTGCTATTTATTTTTTTAATATAAGACGTTTGATTGCTAGTTTGAGCAGTTACGGTGTTGTTTAGCTGTGTATTAATGGCATAAATGTGACATAACTACTTACATGTTTAAATTGTTTGAATGTTTATTTAGTTGCTTGTGGGAAATTTCATAGTTGGTCAATTCCAAGATTTCTGGTTTATTTAAATCGTTGAATTGGGTTAGTATCTTGTTTTTCTTTGCGTATTGCTTTTCTTGTGGAAAAAGTTGCAGAATAAGAGCTAAAGTGGAAGGAAGAAGAAAAGAGAAAGGTTGTATTATATTTGGACTACAGACTTACAAGCGCTGAAAATTTGCATTAATTGACTTACTTGTTCGTAGGTCCAATTCAGTTTGCCTTCTGCTATCAGATAAAAGGGGAAAAAGGGGTTTCCTAGAACCACCAACCACCACAAACCAAAAGTTTAAGTTGATGAGTTGGAATAAATATTAATTGAAAGGAAACGACATTATAAGTTTAAATACAGAACTGACCTCCTACCTTGATAGTATGTTAAATCAAATCACCTTTCAACTAAGAAACTCAAGTTGAATGGTGATTGGGTTTTTTTCATTCTCCCAACCACTTGTATTGAATTCCCATTTTATGATTCTTTTGGGATTTAGCTTGCTGAGACTGAAATTAATTTCAGGTATCCTCAATATCATCGTTTGCTTCCATGCCCCTCATTTAGTAAACTTCCACGAGTTGAACATATGGTCGTTGTGGAAGCAGGACCTGTTATGGAATACATCTGTAAATCATTGGACCTTCCTCCTCTGTAAGTTATACTACTTTTTGTTGTTCATAATAATTTATTCTGCAACATAAGATCAACTCTAATTTGGATGAAGCAATGAATTCATGATTTCATTGTTTGAAGGTATGTTGCAGACCTTATTCATTTTGGTGCAGTATATTATGCCCTAGTATGCCCACAGCCTCCTAAAACTGCAACTCCCGAGCAAATTAGACTATTCAAAAAATTTACAGAACCATCATTCTTGAAAGGGCGAAAATCCATCAAAGGGAAAACTGTGAGAGAGGCACAGAAGACTTTCCGGATAACTCATGTTGATGAGTTTGTGGAAGTTGGAACGTACTTGCGTGTTCACGTGCATCCCAAACGCTTTCCAAGGTGGAATCAGCTACCTTTTTTTCTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTAATTTTATTTTAAAAAATCGATGTTCATAATGAAATTATGCTTGTTGACATTTACAATTAATCAGGTGCTATGACATTGATTGGAAATCAAGAATTATTGCTGTCACAGAATCCTATGTGGTTTTGGACAAACCTGCTGGTACATCGGTCTGTAGTTGAACACTTGAACTGTTCTCTCTGGCTTGAGAAATTATTTTCATTGCCTTCTATTTGTGGCAACTATTGACTTTTGCATTCTATCTTCCTGTGACATTCTGAAAATTTGATCAAGACTGACATGGGCACTAGGCATTTTGGTGGTCTGGATAAATTTACTGATCTTTCAGTAACATGCCACCTCTCAAGTAATAAAATTTGATGATGTAAACAATAAACCCATGCCACCACTCATTTGCATCGTTTTTTTTTTGTTAATAAAACAATTTATTTACATCAGTACCATCTAGCTGAACATTCACTTCTTAGGCTTTAAGTAAGACAAATATTCTGTCAGGTTGGAGGCACTACTGACAACATTGAAGAAAGTTGTGCAACCTTTGCAACTCGTGCTTTGGGATTGACTTCTCCTTTGTGGACTACCCATCAGATCGACAACTGCACTGAAGGCTGGTAATGATGCTTCTTATATATGTTTCTATGTCTAATTCTAATTCCTCTATTCAAAAGACTTGTTTTCATTCATTTACACTTTTGCAGCGTCATTCTTGCTAGGACAAAAGAATATTGCTCCATCTTCCATCGTAAAATCAGAGTAAGTTTCATGGTCTTATTTCTTGAGTTTGACCATTGCGGTTAGCTTACTTTACTAACTGGTAAAATTATTTCCAAGACAATGCTTAAAAGTGACAGCTCTATTCCCATAATGTAAAGTAAAACTATTTTTTTTAGCCATCTTTAAACCTCTGTTTATTTTCTCCTTTTCCATTATTTATTTGTGTTATAATTTGGATATGGTGTAGTAAAATATTCCTGCCAAATCTTCGTTATGCTCACTATACTGGTAAAATGTAAAAATGGTCGTATTATTCTCGCTCTAAATATAGTCTAATCTCTATGATAAAGATGTCTATCAAGGGAACAAGAATGTAAGCTAGTCCTTAGACTTTGCAGTTGAGATTGTCATTTTTAAGCACTTCACAACAAGGGGAAGTGAAAGATAAAGGAAGTAAAAATGAATTTTACTTGGCACGAGCTGATGAGTTATTTTATTTTCAGTGGCGTTGTTAGAATATCCATTAATCATTATACATATTTGGAATTTACTAGTTAAGTTATTTTTCTTGATGTTTTTCATCTCTTAATTTGATAGTAATGCTTTACAATTCTTCTTAATAGGAGAAAAGGGTTATGAAGCATTATCTTGCGCTTTCTGCTGCTCCCGTCCCAATGGGAATAATAACACACTACATGCGGCCAATTAATATAGCTCCCAGACTTGTTTCAAAAGGTAAGTCTCCCGATCAAGCATTCAAATTAATAATAAGTCTCCCGATCAAGCATTCAAATAATAATAAGCTATTGCCTTGAACTATTTGTTGCAATTTGATATGTTGAGGAACATATGCATACCGTTTAATTATTATTTTGCAGCCATAAACTCAAGCACTTAAAATACTAGTCTTAGCTTTTCTGCCAACTAATTATTAATATACAAATGGAAAGGTCATCCCAGTCATATTAGCATTTTAACTCCCACCCAACCTGGTACGTACAATCTCAACCCTAGCCACAAACATATCGTGTATCCATAATAAGTATTAGATAGTATATGATTTCATTCATAACCAATTGAAGTGATAGGAGTCTCATCTATTTTATAAGGAGTGTGAAGGCCTTTGATTTTATCAATGTGAGATTCTTTTGGGTTCACCATTTCTTTTTTATTAGACTGAATACCCGTTTGGGTTTTTGAGGCTCTTATACCATATTAGATAGTGCGGGGTTTCATTTCAAAACCGATTGGATTTAAGAAGTATGAGTTCCTTCGATCTTTCGAATGTGGGATTTCCAATTATAAGTCATGATTGGCAGAAGTTCTTTAGGTCGCTTTAAACTTCTTCTCCTTGCAGATTGTATTGATGGATGGATCCTTTGTCAGCTAGAGGTGTTGGAATGCAGAGAGGTTTCATGGCCGGATGTTGATATTGAAGCAAAATACTGCTTTGAAGATGGTGGATGGCCCTCCAAAAAGAAAGCTTATGAATGTAAAATAAACCTCTTGACTGGTCGGACACATCAGGTTCTTAGTGCAGTCATTCTGTTTTGTAGCTATCTGTATAATTTTGAAACCATCTTCACAAATACTTGCAGCCAGAGATGGGACATTGAAAACAGTTCTTAAAATGAATATGCTGTTTCCTGATGATGCAGATTCGAGCACAGCTGGCTGATTGTGGAGCACCGTTGGTTGGTGATTCCATGTATATGCCTGCTGTGGTTGCAGAGATGGGTAGTCCTGGGTTGAATCCATTTGGAAAATGTAAGAAAGAGTATACCAGTGAAGAAGATAAAGAAACTGCAGTGGCAGAGTGGATTGCTCTTCATGGAAAAGAACCAGCCGTTGCTATTGGACTGCAGGCTTATGAGATTTCATGGGATTCGAGGGAGCACATTTACAATGCTGGTACTCCATGGTGGAGGCAGGAACAATTGTAGCTCGATGTTGACTCCAAACCATCATTTTGCATTAGCCAACATTCTCCAAATCTATAAGGTTATTTCAACTGCCCACTACACACACGGAAAAGAGTTGAGAAATATGCTCTTTATTTTGTTTTGCTCTAAAATCAAGTCTTTTGTTTACAAAGATACCAAAACCATCTACATCTATAACCAGCTTAGAAAGTTAATAACCGAAGCTAACAGCATTCAACTATTAAATCAGTCGTGTACAAGCAATTACATTGACAATTCTCATATAATATAGGGGCGCTGCTTGCTTAGATCACTTTCTTGGACATTGAACTGACGTTGTTGCTCATCAAAATTTGAGCAATGAAATTTTTGTACCAAAAGGTTGATAGCTTGGGTGTTCTCTTCAGAGTTGTATAGTCTACATGGCAAAGCCCAAACCTTTCAGTATATCCATTCATCCATTCAAAGTTATCCAGCAAAGACCAGGCAAAGTACCCTCTCACATCTGCTCCTTCTCTGAACATGCATCACATCATATACAATCAAGACAAGCTTCAACACAATCACCACTGCATAAAGCGAAACTCTTGCTTTCTATTGGACCATTGGATGTATGTTATTAGATAAATTCAAAATTTTCATTCTGTACGCCCAATGGATGTAATCAAGTTTGATGTTAAAGCATGAATTGGAAAGTATATAGTCTAGTGTTGTTCCTAAAGCATTATTTCTCTATGGAGTGGAACGCTGTAAATTTGGGTTCTTGTTTTCTTCATTTAATAATCTTTTTTTCTGGGGAAGCTAAATCCCCTTTTGCATGTCTCCTTAGAAATTATTGGTCAAAATGATTCTGTTTCTTGCTATTTTACCCCTCCCTCAGAATAGTTAGTTGCCCAAGTGAAATCATTATCCAGTAAAGTACTTGTCTGTTTAGTATTTATTTGAAAGATTTTGTTCCTTCAGGACCGAAGAAAATATTTTGAACCATAGAAGAGTGGCGAAGTTTATGGAAAAGTTCCTTGACCATCTGGGTCTAGCTTAAGAGAAACTTAAAAGACCTCTAAAAGTTC

mRNA sequence

ATGGATGTCTCTCTGGTGGCCGCCCATGGTTGTCGTGGCCTCAGTACATCACTTACCCTGCTGCGCGAAGTGGCGAGAACTCGTGCTAATCTCAGTGCTCCCATTTCCACCACTTGCTTTACTGCTCGGCGTTCTTTTAGTTTGAATAGTAGCGCGTTCCCTTGTGAATCCTCAACAACAGACGTGAACGTTACACAAACTGCTACTAATTCTGCAGAAAATGGGTATCCTGAATATCATCGTTTGCTTCCATGTACTTCATTCAATGCCCCACCACGAGTTGAACATCTGGTCGTTTTGGAAGGGGGACCTGTTATGGAATACATCTCTAAATCCTTGGATCTTCCTCCTATGTATGTTGCAGATCTCATTCATTTTGGTGCAGTATATTATGCCCTAGTATGCCCACAGCCTCCGCCAACTGCATCCTCCGAGGAAATTAGACTATTCAAAAAATTTACACAACCATCATTTTTGATAGGGCGAAAATCTATCAAGGGGAAAACCTTGAGAGAAGCACAGAAGACTTTCCGGATAACTCATATCGATGAGTTTGTTGAAGTTGGAACATACTTGCGTGTTTATGTGCATCCCAAACGCTTTCCAAGGTGCTATGACATTGATTGGAAATCAAGAATTATTGCTGTCACAGAATCCTATGTGGTTTTGGACAAACCTGCTGGTACATCGGTTGGAGGCACTACTGACAACATTGAAGAAAGTTGTGCAACCTTTGCAACTCGTGCTTTGGGATTGACTTCTCCTTTGTGGACTACCCATCAGATCGACAACTGCACTGAAGGCTGCGTCATTCTTGCTAGGACAAAAGAATATTGCTCCATCTTCCATCGTAAAATCAGAGAGAAAAGGGTTATGAAGCATTATCTTGCGCTTTCTGCTGCTCCCGTCCCAATGGGAATAATAACACACTACATGCGGCCAATTAATATAGCTCCCAGACTTGTTTCAAAAGATTGTATTGATGGATGGATCCTTTGTCAGCTAGAGGTGTTGGAATGCAGAGAGGTTTCATGGCCGGATGTTGATATTGAAGCAAAATACTGCTTTGAAGATGGTGGATGGCCCTCCAAAAAGAAAGCTTATGAATGTAAAATAAACCTCTTGACTGGTCGGACACATCAGATTCGAGCACAGCTGGCTGATTGTGGAGCACCGTTGGTTGGTGATTCCATGTATATGCCTGCTGTGGTTGCAGAGATGGGTAGTCCTGGGTTGAATCCATTTGGAAAATGTAAGAAAGAGTATACCAGTGAAGAAGATAAAGAAACTGCAGTGGCAGAGTGGATTGCTCTTCATGGAAAAGAACCAGCCGTTGCTATTGGACTGCAGGCTTATGAGATTTCATGGGATTCGAGGGAGCACATTTACAATGCTGGTACTCCATGGTGGAGGCAGGAACAATTGTAGCTCGATGTTGACTCCAAACCATCATTTTGCATTAGCCAACATTCTCCAAATCTATAAGGGGCGCTGCTTGCTTAGATCACTTTCTTGGACATTGAACTGACGTTGTTGCTCATCAAAATTTGAGCAATGAAATTTTTGTACCAAAAGGTTGATAGCTTGGGTGTTCTCTTCAGAGTTGTATAGTCTACATGGCAAAGCCCAAACCTTTCAGTATATCCATTCATCCATTCAAAGTTATCCAGCAAAGACCAGGCAAAGTACCCTCTCACATCTGCTCCTTCTCTGAACATGCATCACATCATATACAATCAAGACAAGCTTCAACACAATCACCACTGCATAAAGCGAAACTCTTGCTTTCTATTGGACCATTGGATGTATGTTATTAGATAAATTCAAAATTTTCATTCTGTACGCCCAATGGATGTAATCAAGTTTGATGTTAAAGCATGAATTGGAAAGTATATAGTCTAGTGTTGTTCCTAAAGCATTATTTCTCTATGGAGTGGAACGCTGTAAATTTGGGTTCTTGTTTTCTTCATTTAATAATCTTTTTTTCTGGGGAAGCTAAATCCCCTTTTGCATGTCTCCTTAGAAATTATTGGTCAAAATGATTCTGTTTCTTGCTATTTTACCCCTCCCTCAGAATAGTTAGTTGCCCAAGTGAAATCATTATCCAGTAAAGTACTTGTCTGTTTAGTATTTATTTGAAAGATTTTGTTCCTTCAGGACCGAAGAAAATATTTTGAACCATAGAAGAGTGGCGAAGTTTATGGAAAAGTTCCTTGACCATCTGGGTCTAGCTTAAGAGAAACTTAAAAGACCTCTAAAAGTTC

Coding sequence (CDS)

ATGGATGTCTCTCTGGTGGCCGCCCATGGTTGTCGTGGCCTCAGTACATCACTTACCCTGCTGCGCGAAGTGGCGAGAACTCGTGCTAATCTCAGTGCTCCCATTTCCACCACTTGCTTTACTGCTCGGCGTTCTTTTAGTTTGAATAGTAGCGCGTTCCCTTGTGAATCCTCAACAACAGACGTGAACGTTACACAAACTGCTACTAATTCTGCAGAAAATGGGTATCCTGAATATCATCGTTTGCTTCCATGTACTTCATTCAATGCCCCACCACGAGTTGAACATCTGGTCGTTTTGGAAGGGGGACCTGTTATGGAATACATCTCTAAATCCTTGGATCTTCCTCCTATGTATGTTGCAGATCTCATTCATTTTGGTGCAGTATATTATGCCCTAGTATGCCCACAGCCTCCGCCAACTGCATCCTCCGAGGAAATTAGACTATTCAAAAAATTTACACAACCATCATTTTTGATAGGGCGAAAATCTATCAAGGGGAAAACCTTGAGAGAAGCACAGAAGACTTTCCGGATAACTCATATCGATGAGTTTGTTGAAGTTGGAACATACTTGCGTGTTTATGTGCATCCCAAACGCTTTCCAAGGTGCTATGACATTGATTGGAAATCAAGAATTATTGCTGTCACAGAATCCTATGTGGTTTTGGACAAACCTGCTGGTACATCGGTTGGAGGCACTACTGACAACATTGAAGAAAGTTGTGCAACCTTTGCAACTCGTGCTTTGGGATTGACTTCTCCTTTGTGGACTACCCATCAGATCGACAACTGCACTGAAGGCTGCGTCATTCTTGCTAGGACAAAAGAATATTGCTCCATCTTCCATCGTAAAATCAGAGAGAAAAGGGTTATGAAGCATTATCTTGCGCTTTCTGCTGCTCCCGTCCCAATGGGAATAATAACACACTACATGCGGCCAATTAATATAGCTCCCAGACTTGTTTCAAAAGATTGTATTGATGGATGGATCCTTTGTCAGCTAGAGGTGTTGGAATGCAGAGAGGTTTCATGGCCGGATGTTGATATTGAAGCAAAATACTGCTTTGAAGATGGTGGATGGCCCTCCAAAAAGAAAGCTTATGAATGTAAAATAAACCTCTTGACTGGTCGGACACATCAGATTCGAGCACAGCTGGCTGATTGTGGAGCACCGTTGGTTGGTGATTCCATGTATATGCCTGCTGTGGTTGCAGAGATGGGTAGTCCTGGGTTGAATCCATTTGGAAAATGTAAGAAAGAGTATACCAGTGAAGAAGATAAAGAAACTGCAGTGGCAGAGTGGATTGCTCTTCATGGAAAAGAACCAGCCGTTGCTATTGGACTGCAGGCTTATGAGATTTCATGGGATTCGAGGGAGCACATTTACAATGCTGGTACTCCATGGTGGAGGCAGGAACAATTGTAG

Protein sequence

MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPCESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVLEGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHYLALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYCFEDGGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCKKEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL

Homology

[Close]

BLAST of Pay0018724 vs. ExPASy Swiss-Prot
Match: Q9SVS0 (RNA pseudouridine synthase 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g21770 PE=2 SV=1)

HSP 1 Score: 623.2 bits (1606), Expect = 2.4e-177
Identity = 308/470 (65.53%), Postives = 366/470 (77.87%), Query Frame = 0


Query: 10  GCRGLSTSLTLLREVARTRANLSAPISTTCFTARR---SFSLNSSAFPCES-STTDVNVT 69
           G R L+  ++LLR +A TR      ++T  F + +    F  +   F C S   TD    
Sbjct: 9   GYRNLTAPVSLLRTLASTR------VTTPLFRSNKHSPRFISSPKRFTCLSLLKTDSQNQ 68

Query: 70  QTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVLEGGP-VMEYISKSLDLPPMYVADLI 129
            T ++S+ +GY EY+RL+PC ++N PPR+EH+VVLE    V E+ISK LDLPP+YVADLI
Sbjct: 69  TTLSSSSNSGYHEYNRLMPCPAYNLPPRIEHMVVLEDDVLVSEFISKQLDLPPLYVADLI 128

Query: 130 HFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDE 189
            FGAV+YALVCP+PPPTA+ EEI LF++ T PS L  R SIKGKT+REAQKTFR+TH ++
Sbjct: 129 RFGAVHYALVCPKPPPTATPEEIILFEEVTSPSVLKKRSSIKGKTVREAQKTFRVTHTNQ 188

Query: 190 FVEVGTYLRVYVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCAT 249
           + E GTYLRV+VHPKR PRCY+IDWKSRI+AVT+SYV+LDKPAGT+VGGTTDNIEESCAT
Sbjct: 189 YAEAGTYLRVHVHPKRSPRCYEIDWKSRIVAVTDSYVILDKPAGTTVGGTTDNIEESCAT 248

Query: 250 FATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHYLALSAAPVP 309
           FA+RAL L  PL TTHQIDNCTEGCV+ ARTKEYCS+FH KIR K V K Y AL+AAP+P
Sbjct: 249 FASRALDLPEPLKTTHQIDNCTEGCVVFARTKEYCSVFHTKIRNKEVKKLYRALAAAPLP 308

Query: 310 MGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYCFEDGGWPSK 369
           +GII+HYMRP N+APRLV++D I GW LCQLEVLEC+++ WPD   E K+  ED GW SK
Sbjct: 309 IGIISHYMRPKNMAPRLVAEDSIQGWHLCQLEVLECKKIPWPDAATEKKHDIEDCGWTSK 368

Query: 370 KKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCKKEYTS 429
           + AYEC INLLTG+THQIRAQLA CGAPLVGDSMYMPA +AEMG+P  NP+GK KK YT 
Sbjct: 369 EFAYECTINLLTGKTHQIRAQLAACGAPLVGDSMYMPAAIAEMGNPDTNPYGKAKKHYTM 428

Query: 430 EED-KETAVAEWIALHGKEPAVAIGLQAYEISW--DSREHIYNAGTPWWR 472
           EE+ KETAVAEWI  HGKEP V IGLQA +ISW  D  EH Y AGTPWWR
Sbjct: 429 EENQKETAVAEWIDRHGKEPRVGIGLQACQISWDDDDGEHFYEAGTPWWR 472

[Close]

BLAST of Pay0018724 vs. ExPASy Swiss-Prot
Match: A3BN26 (RNA pseudouridine synthase 6, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0660400 PE=2 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 1.8e-156
Identity = 265/440 (60.23%), Postives = 329/440 (74.77%), Query Frame = 0


Query: 36  STTCFTARRSFSLNSSAFPCESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVE 95
           S++    R   +L+S A P  ++    +   T    A   YP Y RLLPC   + PPR+E
Sbjct: 32  SSSPLLRRHRAALHSPAAPLSAAAVSTSAA-TVEAPATAAYPVYGRLLPCPLQDDPPRIE 91

Query: 96  HLVVLEGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQ 155
           HLV  E    +++IS+SL LPP+YVADLI FGAVYYALV PQPPP A+ E +R+F++ T+
Sbjct: 92  HLVAREDEVAVDFISRSLTLPPLYVADLIKFGAVYYALVAPQPPPHAAPEHVRIFREVTE 151

Query: 156 PSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKRFPRCYDIDWKSRIIA 215
           PS L  RKSIKGKT+REAQKTFR+T  ++ +E GTYLRV+VHPKRFPRCY+IDWKSR+IA
Sbjct: 152 PSVLCRRKSIKGKTVREAQKTFRVTDPNQRLEAGTYLRVHVHPKRFPRCYEIDWKSRVIA 211

Query: 216 VTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILART 275
           VT++YVVLDKPA TSVGG TDNIEESC  F +RALGL +PL TTHQIDNC+EGCV+L++T
Sbjct: 212 VTDNYVVLDKPAATSVGGATDNIEESCVVFTSRALGLETPLMTTHQIDNCSEGCVVLSKT 271

Query: 276 KEYCSIFHRKIREKRVMKHYLALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQL 335
           KE+CS+FH  IREK+V K YLAL+ APV  GIITHYMRPIN APRLVS+D I GW +CQ+
Sbjct: 272 KEFCSVFHGMIREKQVNKRYLALTTAPVSTGIITHYMRPINRAPRLVSEDHIKGWHVCQM 331

Query: 336 EVLECREVSWPDVDIEAKYCFEDGGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVG 395
           E+L+C++V WP   I   +  ++ GWP ++ AYECKINLLTG+THQIRAQLA  G P+VG
Sbjct: 332 EILDCKKVPWPSSLIRKVHKVDNCGWPQQEAAYECKINLLTGKTHQIRAQLAAIGTPIVG 391

Query: 396 DSMYMPAVVAEMGSPGLNPFGKCKKEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEIS 455
           DS YM A +A + +P +NPFG+  + Y SE++K  AV  WI+ HGKEP   IGLQA EIS
Sbjct: 392 DSAYMTAAMAAIVNPSINPFGRWGQNYDSEDEKAAAVEAWISCHGKEPKSVIGLQASEIS 451

Query: 456 WD--SREHIYNAGTPWWRQE 474
           WD     H Y AG PWWRQ+
Sbjct: 452 WDYEGEHHSYKAGVPWWRQD 470

[Close]

BLAST of Pay0018724 vs. ExPASy Swiss-Prot
Match: P75485 (Uncharacterized RNA pseudouridine synthase MG209 homolog OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129) OX=272634 GN=MPN_292 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.4e-07
Identity = 64/246 (26.02%), Postives = 105/246 (42.68%), Query Frame = 0


Query: 161 GRKSIKGKTLRE----AQKTFRITHIDEFVEVGTYLRVYVHPKRFPRCYDIDWKSRIIAV 220
           G  S+ GK + +     Q   R+ H++   E+   + V V P  FP    +D    I+  
Sbjct: 35  GLVSVNGKKITKNGWLVQPEDRV-HVNWSEELFEKVPVEVQPYDFP----LD----ILYE 94

Query: 221 TESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTK 280
            E  +V++KP G     T+ N  ES    A        P++  H++D  T G ++LA+ +
Sbjct: 95  DEQIMVVNKPNGLISHPTSFNESESLLGAALFHCN-HQPVFLVHRLDRDTSGVIMLAKNQ 154

Query: 281 EYCSIFHRKIREKRVMKHYLALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLE 340
                  ++++++ + ++YLAL   P+                     D + G I   LE
Sbjct: 155 SSLLHLQKQLQQRVMKRYYLALVHFPL---------------------DSLSGTISAPLE 214

Query: 341 VLECREVSWP--DVDIEAKYCF-EDGGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPL 400
            +   +V W   +   +AK  F +       +KA   K  LLTGRTHQIR  L     P+
Sbjct: 215 RVGNNKVMWKVGNSSNKAKNAFTKFTVLNQNEKAALIKCELLTGRTHQIRVHLQFIKHPV 249

[Close]

BLAST of Pay0018724 vs. ExPASy Swiss-Prot
Match: Q8PHN2 (Ribosomal large subunit pseudouridine synthase D OS=Xanthomonas axonopodis pv. citri (strain 306) OX=190486 GN=rluD PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 6.7e-07
Identity = 52/205 (25.37%), Postives = 80/205 (39.02%), Query Frame = 0


Query: 218 ESYVVLDKPAGTSV---GGTTDNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILAR 277
           E  +V+DKPAG  V    G  D    +   F   AL         H++D  T G +++AR
Sbjct: 97  EQVLVIDKPAGLVVHPGAGNPDRTLVNALLFRDPALASVPRAGVVHRLDKDTSGVMVVAR 156

Query: 278 TKEYCSIFHRKIREKRVMKHYLALSAAPVPMG------IITHYMRPINIAPRLVSKDCID 337
           T +  +    ++  + V + YLA+    +  G      I  H    + +A R   +D + 
Sbjct: 157 TVQAQTALVEQLSAREVHRQYLAVVVGALVSGGTANAPIDRHPRDRLKMAVRDDGRDAVT 216

Query: 338 GWILCQL----EVLECREVSWPDVDIEAKYCFEDGGWPSKKKAYECKINLLTGRTHQIRA 397
            + L +       LECR                                L TGRTHQIR 
Sbjct: 217 HYRLRERFRAHTALECR--------------------------------LETGRTHQIRV 269

Query: 398 QLADCGAPLVGDSMYMPAVVAEMGS 410
            +A   +P+VGD +Y  A+    G+
Sbjct: 277 HMAHLKSPIVGDPLYGGALKLPKGA 269

[Close]

BLAST of Pay0018724 vs. ExPASy Swiss-Prot
Match: Q8P682 (Ribosomal large subunit pseudouridine synthase D OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) OX=190485 GN=rluD PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.3e-05
Identity = 50/202 (24.75%), Postives = 78/202 (38.61%), Query Frame = 0


Query: 221 VVLDKPAGTSV---GGTTDNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKE 280
           +V+DKPAG  V    G  D    +   F    L         H++D  T G +++ART +
Sbjct: 100 LVIDKPAGLVVHPGAGNPDGTLVNALLFRDPNLAAVPRAGVVHRLDKDTSGVMVVARTLQ 159

Query: 281 YCSIFHRKIREKRVMKHYLALSAAPVPMG------IITHYMRPINIAPRLVSKDCIDGWI 340
             +    ++  + V + YLA+    +  G      I  H    + +A R   +D +  + 
Sbjct: 160 AQTALVEQLSARDVHRQYLAVVVGALVSGGTADAPIDRHPRDRLKMAVRDDGRDAVTHYR 219

Query: 341 LCQL----EVLECREVSWPDVDIEAKYCFEDGGWPSKKKAYECKINLLTGRTHQIRAQLA 400
           L +       LECR                                L TGRTHQIR  +A
Sbjct: 220 LRERFRAHTALECR--------------------------------LETGRTHQIRVHMA 269

Query: 401 DCGAPLVGDSMYMPAVVAEMGS 410
              +P+VGD +Y  A+    G+
Sbjct: 280 HLKSPIVGDPLYGGALKLPKGA 269

[Close]

BLAST of Pay0018724 vs. ExPASy TrEMBL
Match: A0A1S3B3P1 (RNA pseudouridine synthase 6, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485438 PE=4 SV=1)

HSP 1 Score: 922.9 bits (2384), Expect = 5.3e-265
Identity = 446/475 (93.89%), Postives = 460/475 (96.84%), Query Frame = 0


Query: 1   MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPCESSTT 60
           MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFP ESSTT
Sbjct: 1   MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTT 60

Query: 61  DVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVLEGGPVMEYISKSLDLPPMYV 120
           DVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVLEGGPVMEYISKSLDLPPMYV
Sbjct: 61  DVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVLEGGPVMEYISKSLDLPPMYV 120

Query: 121 ADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRIT 180
           ADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRIT
Sbjct: 121 ADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRIT 180

Query: 181 HIDEFVEVGTYLRVYVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEE 240
           HIDEFVEVGTYLRVYVHPKRFPRCY+IDWKSRIIAVT+SYVVLDKPAGTSVGGTT+NIEE
Sbjct: 181 HIDEFVEVGTYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEE 240

Query: 241 SCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHYLALSA 300
           +C TFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREK+VMK YLAL+A
Sbjct: 241 TCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA 300

Query: 301 APVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYCFEDGG 360
            P+P GI+THYMRPIN+APRLVS+DCIDGW LCQLEVLECREVSWPD DIEAKY  ED G
Sbjct: 301 VPLPKGIMTHYMRPINLAPRLVSRDCIDGWNLCQLEVLECREVSWPDADIEAKYSIEDCG 360

Query: 361 WPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCKK 420
           WPSKKKA+ECKINLLTGRTHQIRAQLAD GAPLVGDS+YMPA VAEM +PGLNPFGKCKK
Sbjct: 361 WPSKKKAFECKINLLTGRTHQIRAQLADYGAPLVGDSIYMPAAVAEMANPGLNPFGKCKK 420

Query: 421 EYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL 476
           EYTSEEDKE AVAEWIALHGKEPAVAIGLQAYEISWDS +HIYNAGTPWWRQEQL
Sbjct: 421 EYTSEEDKENAVAEWIALHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWRQEQL 475

[Close]

BLAST of Pay0018724 vs. ExPASy TrEMBL
Match: A0A5A7UTP1 (RNA pseudouridine synthase 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005920 PE=4 SV=1)

HSP 1 Score: 911.4 bits (2354), Expect = 1.6e-261
Identity = 444/484 (91.74%), Postives = 458/484 (94.63%), Query Frame = 0


Query: 1   MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPCESSTT 60
           MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFP ESSTT
Sbjct: 1   MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTT 60

Query: 61  DVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVLEGGPVMEYISKSLDLPPMYV 120
           DVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVLEGGPVMEYISKSLDLPPMYV
Sbjct: 61  DVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVLEGGPVMEYISKSLDLPPMYV 120

Query: 121 ADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRIT 180
           ADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRIT
Sbjct: 121 ADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRIT 180

Query: 181 HIDEFVEVGTYLRVYVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEE 240
           HIDEFVEVGTYLRVYVHPKRFPRCY+IDWKSRIIAVT+SYVVLDKPAGTSVGGTT+NIEE
Sbjct: 181 HIDEFVEVGTYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEE 240

Query: 241 SCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHYLALSA 300
           +C TFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREK+VMK YLAL+A
Sbjct: 241 TCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA 300

Query: 301 APVPMGIITHYMRPINIAPRLVSK---------DCIDGWILCQLEVLECREVSWPDVDIE 360
            P+P GI+THYMRPIN+APRL +          DCIDGW LCQLEVLECREVSWPD DIE
Sbjct: 301 VPLPKGIMTHYMRPINLAPRLFTSFGHFKHLLADCIDGWNLCQLEVLECREVSWPDADIE 360

Query: 361 AKYCFEDGGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPG 420
           AKY  ED GWPSKKKA+ECKINLLTGRTHQIRAQLAD GAPLVGDS+YMPA VAEM +PG
Sbjct: 361 AKYSIEDCGWPSKKKAFECKINLLTGRTHQIRAQLADYGAPLVGDSIYMPAAVAEMANPG 420

Query: 421 LNPFGKCKKEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWR 476
           LNPFGKCKKEYTSEEDKE AVAEWIALHGKEPAVAIGLQAYEISWDS +HIYNAGTPWWR
Sbjct: 421 LNPFGKCKKEYTSEEDKENAVAEWIALHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWR 480

[Close]

BLAST of Pay0018724 vs. ExPASy TrEMBL
Match: A0A0A0LU97 (PseudoU_synth_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G063630 PE=4 SV=1)

HSP 1 Score: 900.2 bits (2325), Expect = 3.7e-258
Identity = 434/475 (91.37%), Postives = 449/475 (94.53%), Query Frame = 0


Query: 1   MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPCESSTT 60
           MDVSLVAAHGC GLSTSL L REVARTRANLSA IS+TCF A RSFS NS AFPCESSTT
Sbjct: 1   MDVSLVAAHGCPGLSTSLNLPREVARTRANLSASISSTCFAALRSFSFNSKAFPCESSTT 60

Query: 61  DVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVLEGGPVMEYISKSLDLPPMYV 120
           DVNVTQTATNSAENGYP+YHRLLPCTSFN PPRVEHLVVLEGGPVMEYISKSLDLPPMYV
Sbjct: 61  DVNVTQTATNSAENGYPQYHRLLPCTSFNVPPRVEHLVVLEGGPVMEYISKSLDLPPMYV 120

Query: 121 ADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRIT 180
           ADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRIT
Sbjct: 121 ADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRIT 180

Query: 181 HIDEFVEVGTYLRVYVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEE 240
           HIDEFVEVGTYLRVYVHPKRFPRCY++DWKSRIIAVT+SYVVLDKPAGTSVGGTT+NIEE
Sbjct: 181 HIDEFVEVGTYLRVYVHPKRFPRCYEVDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEE 240

Query: 241 SCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHYLALSA 300
           +C TFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREK+V K YLAL A
Sbjct: 241 TCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVTKLYLALVA 300

Query: 301 APVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYCFEDGG 360
            P+P GI+THYMRP N+APRLVS+DCIDGW LCQLEVLECREVSWPD DIEAKY  ED G
Sbjct: 301 VPLPKGIMTHYMRPNNLAPRLVSRDCIDGWNLCQLEVLECREVSWPDADIEAKYSIEDCG 360

Query: 361 WPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCKK 420
           WPSKKKA+ECKINLLTGRTHQIRAQLAD GAPLVGDS+YMPA VAEM +PGLNPFGKCKK
Sbjct: 361 WPSKKKAFECKINLLTGRTHQIRAQLADYGAPLVGDSIYMPAAVAEMANPGLNPFGKCKK 420

Query: 421 EYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL 476
           EYTSEEDKE AVAEWIALHGKEPAVAIGLQAYEISWDS EHIYNAGTPWWRQEQL
Sbjct: 421 EYTSEEDKENAVAEWIALHGKEPAVAIGLQAYEISWDSGEHIYNAGTPWWRQEQL 475

[Close]

BLAST of Pay0018724 vs. ExPASy TrEMBL
Match: A0A5D3BM17 (RNA pseudouridine synthase 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005930 PE=4 SV=1)

HSP 1 Score: 895.2 bits (2312), Expect = 1.2e-256
Identity = 433/476 (90.97%), Postives = 452/476 (94.96%), Query Frame = 0


Query: 1   MDVSLVAAHGCRGL-STSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPCESST 60
           M+++LVA HGCRGL STSL+LLR +ARTRA+ SA      F  RRSFS  SSAFPC+SS 
Sbjct: 5   MNIALVATHGCRGLGSTSLSLLRTLARTRASPSAASCCDYFAPRRSFSSISSAFPCKSSI 64

Query: 61  TDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVLEGGPVMEYISKSLDLPPMY 120
           TDV VT+TAT+SAENGYP+YHRLLPC SF+  PRVEH+VVLE GPVMEYI KSLDLPP+Y
Sbjct: 65  TDVTVTKTATDSAENGYPQYHRLLPCPSFSKLPRVEHMVVLEAGPVMEYICKSLDLPPLY 124

Query: 121 VADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRI 180
           VADLIHFGAVYYALVCPQPP TA+ E+IRLFKKFT+PSFL GRKSIKGKT+REAQKTFRI
Sbjct: 125 VADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKTFRI 184

Query: 181 THIDEFVEVGTYLRVYVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIE 240
           TH+DEFVEVGTYLRV+VHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIE
Sbjct: 185 THVDEFVEVGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIE 244

Query: 241 ESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHYLALS 300
           ESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHYLALS
Sbjct: 245 ESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHYLALS 304

Query: 301 AAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYCFEDG 360
           AAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYCFEDG
Sbjct: 305 AAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYCFEDG 364

Query: 361 GWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCK 420
           GWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCK
Sbjct: 365 GWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCK 424

Query: 421 KEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL 476
           KEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL
Sbjct: 425 KEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL 480

[Close]

BLAST of Pay0018724 vs. ExPASy TrEMBL
Match: A0A1S3B303 (RNA pseudouridine synthase 6, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC107990285 PE=4 SV=1)

HSP 1 Score: 895.2 bits (2312), Expect = 1.2e-256
Identity = 433/476 (90.97%), Postives = 452/476 (94.96%), Query Frame = 0


Query: 1   MDVSLVAAHGCRGL-STSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPCESST 60
           M+++LVA HGCRGL STSL+LLR +ARTRA+ SA      F  RRSFS  SSAFPC+SS 
Sbjct: 5   MNIALVATHGCRGLGSTSLSLLRTLARTRASPSAASCCDYFAPRRSFSSISSAFPCKSSI 64

Query: 61  TDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVLEGGPVMEYISKSLDLPPMY 120
           TDV VT+TAT+SAENGYP+YHRLLPC SF+  PRVEH+VVLE GPVMEYI KSLDLPP+Y
Sbjct: 65  TDVTVTKTATDSAENGYPQYHRLLPCPSFSKLPRVEHMVVLEAGPVMEYICKSLDLPPLY 124

Query: 121 VADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRI 180
           VADLIHFGAVYYALVCPQPP TA+ E+IRLFKKFT+PSFL GRKSIKGKT+REAQKTFRI
Sbjct: 125 VADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKTFRI 184

Query: 181 THIDEFVEVGTYLRVYVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIE 240
           TH+DEFVEVGTYLRV+VHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIE
Sbjct: 185 THVDEFVEVGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIE 244

Query: 241 ESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHYLALS 300
           ESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHYLALS
Sbjct: 245 ESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHYLALS 304

Query: 301 AAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYCFEDG 360
           AAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYCFEDG
Sbjct: 305 AAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYCFEDG 364

Query: 361 GWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCK 420
           GWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCK
Sbjct: 365 GWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCK 424

Query: 421 KEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL 476
           KEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL
Sbjct: 425 KEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL 480

[Close]

BLAST of Pay0018724 vs. NCBI nr
Match: XP_008441263.1 (PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X1 [Cucumis melo] >XP_008441272.1 PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X1 [Cucumis melo] >XP_008441288.1 PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X1 [Cucumis melo] >XP_008441297.1 PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 922.9 bits (2384), Expect = 1.1e-264
Identity = 446/475 (93.89%), Postives = 460/475 (96.84%), Query Frame = 0


Query: 1   MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPCESSTT 60
           MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFP ESSTT
Sbjct: 1   MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTT 60

Query: 61  DVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVLEGGPVMEYISKSLDLPPMYV 120
           DVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVLEGGPVMEYISKSLDLPPMYV
Sbjct: 61  DVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVLEGGPVMEYISKSLDLPPMYV 120

Query: 121 ADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRIT 180
           ADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRIT
Sbjct: 121 ADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRIT 180

Query: 181 HIDEFVEVGTYLRVYVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEE 240
           HIDEFVEVGTYLRVYVHPKRFPRCY+IDWKSRIIAVT+SYVVLDKPAGTSVGGTT+NIEE
Sbjct: 181 HIDEFVEVGTYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEE 240

Query: 241 SCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHYLALSA 300
           +C TFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREK+VMK YLAL+A
Sbjct: 241 TCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA 300

Query: 301 APVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYCFEDGG 360
            P+P GI+THYMRPIN+APRLVS+DCIDGW LCQLEVLECREVSWPD DIEAKY  ED G
Sbjct: 301 VPLPKGIMTHYMRPINLAPRLVSRDCIDGWNLCQLEVLECREVSWPDADIEAKYSIEDCG 360

Query: 361 WPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCKK 420
           WPSKKKA+ECKINLLTGRTHQIRAQLAD GAPLVGDS+YMPA VAEM +PGLNPFGKCKK
Sbjct: 361 WPSKKKAFECKINLLTGRTHQIRAQLADYGAPLVGDSIYMPAAVAEMANPGLNPFGKCKK 420

Query: 421 EYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL 476
           EYTSEEDKE AVAEWIALHGKEPAVAIGLQAYEISWDS +HIYNAGTPWWRQEQL
Sbjct: 421 EYTSEEDKENAVAEWIALHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWRQEQL 475

[Close]

BLAST of Pay0018724 vs. NCBI nr
Match: KAA0056871.1 (RNA pseudouridine synthase 6 [Cucumis melo var. makuwa] >TYJ99374.1 RNA pseudouridine synthase 6 [Cucumis melo var. makuwa])

HSP 1 Score: 911.4 bits (2354), Expect = 3.3e-261
Identity = 444/484 (91.74%), Postives = 458/484 (94.63%), Query Frame = 0


Query: 1   MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPCESSTT 60
           MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFP ESSTT
Sbjct: 1   MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTT 60

Query: 61  DVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVLEGGPVMEYISKSLDLPPMYV 120
           DVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVLEGGPVMEYISKSLDLPPMYV
Sbjct: 61  DVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVLEGGPVMEYISKSLDLPPMYV 120

Query: 121 ADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRIT 180
           ADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRIT
Sbjct: 121 ADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRIT 180

Query: 181 HIDEFVEVGTYLRVYVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEE 240
           HIDEFVEVGTYLRVYVHPKRFPRCY+IDWKSRIIAVT+SYVVLDKPAGTSVGGTT+NIEE
Sbjct: 181 HIDEFVEVGTYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEE 240

Query: 241 SCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHYLALSA 300
           +C TFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREK+VMK YLAL+A
Sbjct: 241 TCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA 300

Query: 301 APVPMGIITHYMRPINIAPRLVSK---------DCIDGWILCQLEVLECREVSWPDVDIE 360
            P+P GI+THYMRPIN+APRL +          DCIDGW LCQLEVLECREVSWPD DIE
Sbjct: 301 VPLPKGIMTHYMRPINLAPRLFTSFGHFKHLLADCIDGWNLCQLEVLECREVSWPDADIE 360

Query: 361 AKYCFEDGGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPG 420
           AKY  ED GWPSKKKA+ECKINLLTGRTHQIRAQLAD GAPLVGDS+YMPA VAEM +PG
Sbjct: 361 AKYSIEDCGWPSKKKAFECKINLLTGRTHQIRAQLADYGAPLVGDSIYMPAAVAEMANPG 420

Query: 421 LNPFGKCKKEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWR 476
           LNPFGKCKKEYTSEEDKE AVAEWIALHGKEPAVAIGLQAYEISWDS +HIYNAGTPWWR
Sbjct: 421 LNPFGKCKKEYTSEEDKENAVAEWIALHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWR 480

[Close]

BLAST of Pay0018724 vs. NCBI nr
Match: XP_011652781.1 (RNA pseudouridine synthase 6, chloroplastic isoform X1 [Cucumis sativus] >XP_011652785.1 RNA pseudouridine synthase 6, chloroplastic isoform X1 [Cucumis sativus] >XP_011652787.1 RNA pseudouridine synthase 6, chloroplastic isoform X1 [Cucumis sativus] >KGN64539.1 hypothetical protein Csa_013284 [Cucumis sativus])

HSP 1 Score: 900.2 bits (2325), Expect = 7.6e-258
Identity = 434/475 (91.37%), Postives = 449/475 (94.53%), Query Frame = 0


Query: 1   MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPCESSTT 60
           MDVSLVAAHGC GLSTSL L REVARTRANLSA IS+TCF A RSFS NS AFPCESSTT
Sbjct: 1   MDVSLVAAHGCPGLSTSLNLPREVARTRANLSASISSTCFAALRSFSFNSKAFPCESSTT 60

Query: 61  DVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVLEGGPVMEYISKSLDLPPMYV 120
           DVNVTQTATNSAENGYP+YHRLLPCTSFN PPRVEHLVVLEGGPVMEYISKSLDLPPMYV
Sbjct: 61  DVNVTQTATNSAENGYPQYHRLLPCTSFNVPPRVEHLVVLEGGPVMEYISKSLDLPPMYV 120

Query: 121 ADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRIT 180
           ADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRIT
Sbjct: 121 ADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRIT 180

Query: 181 HIDEFVEVGTYLRVYVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEE 240
           HIDEFVEVGTYLRVYVHPKRFPRCY++DWKSRIIAVT+SYVVLDKPAGTSVGGTT+NIEE
Sbjct: 181 HIDEFVEVGTYLRVYVHPKRFPRCYEVDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEE 240

Query: 241 SCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHYLALSA 300
           +C TFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREK+V K YLAL A
Sbjct: 241 TCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVTKLYLALVA 300

Query: 301 APVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYCFEDGG 360
            P+P GI+THYMRP N+APRLVS+DCIDGW LCQLEVLECREVSWPD DIEAKY  ED G
Sbjct: 301 VPLPKGIMTHYMRPNNLAPRLVSRDCIDGWNLCQLEVLECREVSWPDADIEAKYSIEDCG 360

Query: 361 WPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCKK 420
           WPSKKKA+ECKINLLTGRTHQIRAQLAD GAPLVGDS+YMPA VAEM +PGLNPFGKCKK
Sbjct: 361 WPSKKKAFECKINLLTGRTHQIRAQLADYGAPLVGDSIYMPAAVAEMANPGLNPFGKCKK 420

Query: 421 EYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL 476
           EYTSEEDKE AVAEWIALHGKEPAVAIGLQAYEISWDS EHIYNAGTPWWRQEQL
Sbjct: 421 EYTSEEDKENAVAEWIALHGKEPAVAIGLQAYEISWDSGEHIYNAGTPWWRQEQL 475

[Close]

BLAST of Pay0018724 vs. NCBI nr
Match: XP_008441255.1 (PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform X1 [Cucumis melo] >KAA0056872.1 RNA pseudouridine synthase 6 [Cucumis melo var. makuwa] >TYJ99375.1 RNA pseudouridine synthase 6 [Cucumis melo var. makuwa])

HSP 1 Score: 895.2 bits (2312), Expect = 2.5e-256
Identity = 433/476 (90.97%), Postives = 452/476 (94.96%), Query Frame = 0


Query: 1   MDVSLVAAHGCRGL-STSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPCESST 60
           M+++LVA HGCRGL STSL+LLR +ARTRA+ SA      F  RRSFS  SSAFPC+SS 
Sbjct: 5   MNIALVATHGCRGLGSTSLSLLRTLARTRASPSAASCCDYFAPRRSFSSISSAFPCKSSI 64

Query: 61  TDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVLEGGPVMEYISKSLDLPPMY 120
           TDV VT+TAT+SAENGYP+YHRLLPC SF+  PRVEH+VVLE GPVMEYI KSLDLPP+Y
Sbjct: 65  TDVTVTKTATDSAENGYPQYHRLLPCPSFSKLPRVEHMVVLEAGPVMEYICKSLDLPPLY 124

Query: 121 VADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRI 180
           VADLIHFGAVYYALVCPQPP TA+ E+IRLFKKFT+PSFL GRKSIKGKT+REAQKTFRI
Sbjct: 125 VADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKTFRI 184

Query: 181 THIDEFVEVGTYLRVYVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIE 240
           TH+DEFVEVGTYLRV+VHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIE
Sbjct: 185 THVDEFVEVGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIE 244

Query: 241 ESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHYLALS 300
           ESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHYLALS
Sbjct: 245 ESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHYLALS 304

Query: 301 AAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYCFEDG 360
           AAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYCFEDG
Sbjct: 305 AAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYCFEDG 364

Query: 361 GWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCK 420
           GWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCK
Sbjct: 365 GWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCK 424

Query: 421 KEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL 476
           KEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL
Sbjct: 425 KEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL 480

[Close]

BLAST of Pay0018724 vs. NCBI nr
Match: XP_038894435.1 (RNA pseudouridine synthase 6, chloroplastic-like isoform X1 [Benincasa hispida])

HSP 1 Score: 861.3 bits (2224), Expect = 3.9e-246
Identity = 414/475 (87.16%), Postives = 439/475 (92.42%), Query Frame = 0


Query: 1   MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPCESSTT 60
           M++SLVAAHGCRGL TSLTLLR++ARTRANLSA I   CF ARRSF L S+AFPCESST 
Sbjct: 5   MNISLVAAHGCRGLCTSLTLLRKLARTRANLSAAICGNCFAARRSFRLKSNAFPCESSTA 64

Query: 61  DVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVLEGGPVMEYISKSLDLPPMYV 120
           DV  TQTATNSAENGYP+YHRLLPC SFN   RVEHLVVLE GPV+EYISKSLDLPP+YV
Sbjct: 65  DVTSTQTATNSAENGYPQYHRLLPCPSFNRHTRVEHLVVLERGPVLEYISKSLDLPPLYV 124

Query: 121 ADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRIT 180
           ADLIHFGAVYYALVCPQP PTA+ EE RLFKKFT+PSFL GR SIKGKTLREAQ TFRIT
Sbjct: 125 ADLIHFGAVYYALVCPQPAPTATPEEFRLFKKFTEPSFLKGRISIKGKTLREAQNTFRIT 184

Query: 181 HIDEFVEVGTYLRVYVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEE 240
           HIDEFVEVG YLRVYVHPKRFPRCY+IDWKSRIIAVT+SYVVLDKPAGTSVGGTT+NIEE
Sbjct: 185 HIDEFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEE 244

Query: 241 SCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHYLALSA 300
           +C TFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREK+VMK YLAL+A
Sbjct: 245 TCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA 304

Query: 301 APVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYCFEDGG 360
           AP+PMGIITHYMRP+N+APRLVS+D IDGW LCQLEVLECREVSWPD DIEAKY  ED G
Sbjct: 305 APIPMGIITHYMRPVNLAPRLVSEDFIDGWNLCQLEVLECREVSWPDADIEAKYYIEDCG 364

Query: 361 WPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCKK 420
           WPSKKKA+ECKINLLTGRTHQIRAQLADCGAPLVGDS+YMPA VAEM +PGLNPFGKCKK
Sbjct: 365 WPSKKKAFECKINLLTGRTHQIRAQLADCGAPLVGDSIYMPAAVAEMANPGLNPFGKCKK 424

Query: 421 EYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL 476
           EYTSEEDKETAVAEWIA HGKEPAVAIGLQAYEISWDS +HIYNAGTPWW+ EQL
Sbjct: 425 EYTSEEDKETAVAEWIAQHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWKLEQL 479

[Close]

BLAST of Pay0018724 vs. TAIR 10
Match: AT4G21770.1 (Pseudouridine synthase family protein )

HSP 1 Score: 623.2 bits (1606), Expect = 1.7e-178
Identity = 308/470 (65.53%), Postives = 366/470 (77.87%), Query Frame = 0


Query: 10  GCRGLSTSLTLLREVARTRANLSAPISTTCFTARR---SFSLNSSAFPCES-STTDVNVT 69
           G R L+  ++LLR +A TR      ++T  F + +    F  +   F C S   TD    
Sbjct: 9   GYRNLTAPVSLLRTLASTR------VTTPLFRSNKHSPRFISSPKRFTCLSLLKTDSQNQ 68

Query: 70  QTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVLEGGP-VMEYISKSLDLPPMYVADLI 129
            T ++S+ +GY EY+RL+PC ++N PPR+EH+VVLE    V E+ISK LDLPP+YVADLI
Sbjct: 69  TTLSSSSNSGYHEYNRLMPCPAYNLPPRIEHMVVLEDDVLVSEFISKQLDLPPLYVADLI 128

Query: 130 HFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDE 189
            FGAV+YALVCP+PPPTA+ EEI LF++ T PS L  R SIKGKT+REAQKTFR+TH ++
Sbjct: 129 RFGAVHYALVCPKPPPTATPEEIILFEEVTSPSVLKKRSSIKGKTVREAQKTFRVTHTNQ 188

Query: 190 FVEVGTYLRVYVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCAT 249
           + E GTYLRV+VHPKR PRCY+IDWKSRI+AVT+SYV+LDKPAGT+VGGTTDNIEESCAT
Sbjct: 189 YAEAGTYLRVHVHPKRSPRCYEIDWKSRIVAVTDSYVILDKPAGTTVGGTTDNIEESCAT 248

Query: 250 FATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHYLALSAAPVP 309
           FA+RAL L  PL TTHQIDNCTEGCV+ ARTKEYCS+FH KIR K V K Y AL+AAP+P
Sbjct: 249 FASRALDLPEPLKTTHQIDNCTEGCVVFARTKEYCSVFHTKIRNKEVKKLYRALAAAPLP 308

Query: 310 MGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYCFEDGGWPSK 369
           +GII+HYMRP N+APRLV++D I GW LCQLEVLEC+++ WPD   E K+  ED GW SK
Sbjct: 309 IGIISHYMRPKNMAPRLVAEDSIQGWHLCQLEVLECKKIPWPDAATEKKHDIEDCGWTSK 368

Query: 370 KKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCKKEYTS 429
           + AYEC INLLTG+THQIRAQLA CGAPLVGDSMYMPA +AEMG+P  NP+GK KK YT 
Sbjct: 369 EFAYECTINLLTGKTHQIRAQLAACGAPLVGDSMYMPAAIAEMGNPDTNPYGKAKKHYTM 428

Query: 430 EED-KETAVAEWIALHGKEPAVAIGLQAYEISW--DSREHIYNAGTPWWR 472
           EE+ KETAVAEWI  HGKEP V IGLQA +ISW  D  EH Y AGTPWWR
Sbjct: 429 EENQKETAVAEWIDRHGKEPRVGIGLQACQISWDDDDGEHFYEAGTPWWR 472

The following BLAST results are available for this feature:

BLAST of Pay0018724 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVS0	2.4e-177	65.53	RNA pseudouridine synthase 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
A3BN26	1.8e-156	60.23	RNA pseudouridine synthase 6, chloroplastic OS=Oryza sativa subsp. japonica OX=3...	[more]
P75485	1.4e-07	26.02	Uncharacterized RNA pseudouridine synthase MG209 homolog OS=Mycoplasma pneumonia...	[more]
Q8PHN2	6.7e-07	25.37	Ribosomal large subunit pseudouridine synthase D OS=Xanthomonas axonopodis pv. c...	[more]
Q8P682	1.3e-05	24.75	Ribosomal large subunit pseudouridine synthase D OS=Xanthomonas campestris pv. c...	[more]

BLAST of Pay0018724 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B3P1	5.3e-265	93.89	RNA pseudouridine synthase 6, chloroplastic isoform X1 OS=Cucumis melo OX=3656 G...	[more]
A0A5A7UTP1	1.6e-261	91.74	RNA pseudouridine synthase 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0LU97	3.7e-258	91.37	PseudoU_synth_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G06...	[more]
A0A5D3BM17	1.2e-256	90.97	RNA pseudouridine synthase 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3B303	1.2e-256	90.97	RNA pseudouridine synthase 6, chloroplastic-like isoform X1 OS=Cucumis melo OX=3...	[more]

BLAST of Pay0018724 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441263.1	1.1e-264	93.89	PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X1 [Cucumis melo]...	[more]
KAA0056871.1	3.3e-261	91.74	RNA pseudouridine synthase 6 [Cucumis melo var. makuwa] >TYJ99374.1 RNA pseudour...	[more]
XP_011652781.1	7.6e-258	91.37	RNA pseudouridine synthase 6, chloroplastic isoform X1 [Cucumis sativus] >XP_011...	[more]
XP_008441255.1	2.5e-256	90.97	PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform X1 [Cucumis ...	[more]
XP_038894435.1	3.9e-246	87.16	RNA pseudouridine synthase 6, chloroplastic-like isoform X1 [Benincasa hispida]	[more]

BLAST of Pay0018724 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21770.1	1.7e-178	65.53	Pseudouridine synthase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.2350.10	Pseudouridine synthase	coord: 206..460 e-value: 1.5E-26 score: 95.4
None	No IPR available	PANTHER	PTHR21600:SF52	RNA PSEUDOURIDINE SYNTHASE 6, CHLOROPLASTIC	coord: 18..470
None	No IPR available	PANTHER	PTHR21600	MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE	coord: 18..470
IPR006145	Pseudouridine synthase, RsuA/RluA-like	PFAM	PF00849	PseudoU_synth_2	coord: 220..387 e-value: 3.6E-22 score: 79.2
IPR006145	Pseudouridine synthase, RsuA/RluA-like	CDD	cd02869	PseudoU_synth_RluA_like	coord: 220..412 e-value: 7.47162E-33 score: 121.29
IPR020103	Pseudouridine synthase, catalytic domain superfamily	SUPERFAMILY	55120	Pseudouridine synthase	coord: 205..406

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0018724.1	Pay0018724.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000455	enzyme-directed rRNA pseudouridine synthesis
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0009451	RNA modification
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009982	pseudouridine synthase activity
molecular_function	GO:0003723	RNA binding