Pay0018628 (gene) Melon (Payzawat) v1

Overview


Name	Pay0018628
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Retrovirus-related Pol polyprotein from transposon RE1
Location	chr11: 8132991 .. 8134412 (-)
RNA-Seq Expression	Pay0018628
Synteny	Pay0018628

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAACTCGAGCAAAATCAGGTATTTTTAAGCCAAAGGCCTTTCACATTACAACTGCTCTCCCAACTCCCACATCATATACAGAAGCCTCCAAATATCCAGAATGGCGAACTGCGATGCATGAGGAATTCAATGCTCTTCAAGCACAAGGTACCTGGTCCCTAGTACCTCGACTTCCATCTATGAATATTGTTGGTTGTAAAGGTTATCATCAGGTACAAGGTTTTGATTTTGATGAAACATTTAGTCCTGTTGTTAAGAAACCTACCATACGCATCATTCTTGCTCTTGCTGCTCAATACAATTGGTCTTTAACCCAGTTAGATGTCAAAAATGCCTTTCTTCATGGTATTCTTCAAGAAACAGTGTACATGACTCAACCTACTGGCTTCCAAGACAAAACATGTCCCAATCATGTGTGTCTCCTCCACAAGAGTCTTTATGGTCTCAAACAGGCCCCTCGCCCTTGGTTTGAACGCTTTACATCTTATTTATTCACTTTGGGTTTTGTTGCGTCTACAGCTGATCCGTCATTATTCATTCGATCAGTCGGATCCTTTCTCACTTACTTTTGTATGTAGATGACATCATTGTCACTGGACCTGACTATTTATACATTTCTGTTCTTAAAAACCAATTGGCCCTGGAATTCAAAATATCCGACCTTGGTCCTTTAAAGTACTTTCTTGGTCTCGAAATCCAATCCTCCATTTATTGCATATTTGTTAACCAAGCTAAATATCTCAATGATCTCCTCTACACACCGGGAATGACCTTTGCCAAATCTTGTATCACACCAATGTCTACTTCTCTTGATCTTTATACAATTGCACCACCATTTAATGATCCATCACTTTATCGCAGACTAGTTGGTTCCTTGTAATATCTTACCTTCACTCATCCTGATATTGCATTCTCTGTAAATCATGTTAGTCAGTTCATGCATAAACCAACTGTCATTCACTTTTCAGCCGTCAAACGCATCCTCAGATATCTCCGTGGTACTCCAACCCTTGGAATAAAATTTCGAAAAGGTTCGCTTTCTCTACAAACCTTTCTCTACCGTCTCTCGTTCCTCCACAGAAGCAGAATATTGTTCCCTTGCCACTACTACTGCCGATCTTTACTGGATTCGACAGCTTCTATGTGTTCTCCATGTTCCCCTTAAGACATCACCAACATTGTGGTGTGACAAAGTTTCCGCTATATCTCTGGCTCATAATCCAGTTTTTCATGCTCGCACCAAACACATCGAAATCGATTATCACTTTGTTCGGGAAAAAATTCTTCGCAAAGACATCTCCATCCGTTACATCTCTTCCAACAACCAACTTGTTGATATTCTCACAAAGCCACTCCTATCTCCTACATTCCTTCACCTTCGAGACAAACTACTCACTCAACCTGAGTCATCCGTTTGA

mRNA sequence

ATGCAAACTCGAGCAAAATCAGGTATTTTTAAGCCAAAGGCCTTTCACATTACAACTGCTCTCCCAACTCCCACATCATATACAGAAGCCTCCAAATATCCAGAATGGCGAACTGCGATGCATGAGGAATTCAATGCTCTTCAAGCACAAGATGACATCATTGTCACTGGACCTGACTATTTATACATTTCTGTTCTTAAAAACCAATTGGCCCTGGAATTCAAAATATCCGACCTTGGTCCTTTAAAGTACTTTCTTGGTCTCGAAATCCAATCCTCCATTTATTGCATATTTGTTAACCAAGCTAAATATCTCAATGATCTCCTCTACACACCGGGAATGACCTTTGCCAAATCTTGTATCACACCAATGTCTACTTCTCTTGATCTTTATACAATTGCACCACCATTTAATGATCCATCACTTTATCGCAGACTAGTTCGCTTTCTCTACAAACCTTTCTCTACCGTCTCTCGTTCCTCCACAGAAGCAGAATATTGTTCCCTTGCCACTACTACTGCCGATCTTTACTGGATTCGACAGCTTCTATGTGTTCTCCATGTTCCCCTTAAGACATCACCAACATTGTGGTGTGACAAAGTTTCCGCTATATCTCTGGCTCATAATCCAGTTTTTCATGCTCGCACCAAACACATCGAAATCGATTATCACTTTGTTCGGGAAAAAATTCTTCGCAAAGACATCTCCATCCGTTACATCTCTTCCAACAACCAACTTGTTGATATTCTCACAAAGCCACTCCTATCTCCTACATTCCTTCACCTTCGAGACAAACTACTCACTCAACCTGAGTCATCCGTTTGA

Coding sequence (CDS)

ATGCAAACTCGAGCAAAATCAGGTATTTTTAAGCCAAAGGCCTTTCACATTACAACTGCTCTCCCAACTCCCACATCATATACAGAAGCCTCCAAATATCCAGAATGGCGAACTGCGATGCATGAGGAATTCAATGCTCTTCAAGCACAAGATGACATCATTGTCACTGGACCTGACTATTTATACATTTCTGTTCTTAAAAACCAATTGGCCCTGGAATTCAAAATATCCGACCTTGGTCCTTTAAAGTACTTTCTTGGTCTCGAAATCCAATCCTCCATTTATTGCATATTTGTTAACCAAGCTAAATATCTCAATGATCTCCTCTACACACCGGGAATGACCTTTGCCAAATCTTGTATCACACCAATGTCTACTTCTCTTGATCTTTATACAATTGCACCACCATTTAATGATCCATCACTTTATCGCAGACTAGTTCGCTTTCTCTACAAACCTTTCTCTACCGTCTCTCGTTCCTCCACAGAAGCAGAATATTGTTCCCTTGCCACTACTACTGCCGATCTTTACTGGATTCGACAGCTTCTATGTGTTCTCCATGTTCCCCTTAAGACATCACCAACATTGTGGTGTGACAAAGTTTCCGCTATATCTCTGGCTCATAATCCAGTTTTTCATGCTCGCACCAAACACATCGAAATCGATTATCACTTTGTTCGGGAAAAAATTCTTCGCAAAGACATCTCCATCCGTTACATCTCTTCCAACAACCAACTTGTTGATATTCTCACAAAGCCACTCCTATCTCCTACATTCCTTCACCTTCGAGACAAACTACTCACTCAACCTGAGTCATCCGTTTGA

Protein sequence

MQTRAKSGIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQDDIIVTGPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIYCIFVNQAKYLNDLLYTPGMTFAKSCITPMSTSLDLYTIAPPFNDPSLYRRLVRFLYKPFSTVSRSSTEAEYCSLATTTADLYWIRQLLCVLHVPLKTSPTLWCDKVSAISLAHNPVFHARTKHIEIDYHFVREKILRKDISIRYISSNNQLVDILTKPLLSPTFLHLRDKLLTQPESSV

Homology

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BLAST of Pay0018628 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 101.7 bits (252), Expect = 1.4e-20
Identity = 80/329 (24.32%), Postives = 138/329 (41.95%), Query Frame = 0


Query: 40   MHEEFNALQAQDDIIVTGPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIYCIFV 99
            ++E    L   DD+++   D   ++  K  L  +F+++DL  +K+F+G+ I+     I++
Sbjct: 1078 INENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYL 1137

Query: 100  NQAKYLNDLLYTPGMTFAKSCITP------------------------------------ 159
            +Q+ Y+  +L    M    +  TP                                    
Sbjct: 1138 SQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCNTPCRSLIGCLMYIMLCTRP 1197

Query: 160  -MSTSLDLYTIAPPFNDPSLYRRLVR---------------------------------- 219
             ++T++++ +     N+  L++ L R                                  
Sbjct: 1198 DLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWA 1257

Query: 220  -----------FLYKPF------------STVSRSSTEAEYCSLATTTADLYWIRQLLCV 274
                       +L+K F            ++V+ SSTEAEY +L     +  W++ LL  
Sbjct: 1258 GSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTS 1317

[Close]

BLAST of Pay0018628 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.4e-20
Identity = 50/110 (45.45%), Postives = 71/110 (64.55%), Query Frame = 0


Query: 157  VSRSSTEAEYCSLATTTADLYWIRQLLCVLHVPLKTSPTLWCDKVSAISLAHNPVFHART 216
            V RSSTEAEY S+A T++++ WI  LL  L + L   P ++CD V A  L  NPVFH+R 
Sbjct: 1349 VVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRM 1408

Query: 217  KHIEIDYHFVREKILRKDISIRYISSNNQLVDILTKPLLSPTFLHLRDKL 267
            KHI IDYHF+R ++    + + ++S+++QL D LTKPL    F +   K+
Sbjct: 1409 KHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQNFASKI 1458

[Close]

BLAST of Pay0018628 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.3e-20
Identity = 50/110 (45.45%), Postives = 71/110 (64.55%), Query Frame = 0


Query: 157  VSRSSTEAEYCSLATTTADLYWIRQLLCVLHVPLKTSPTLWCDKVSAISLAHNPVFHART 216
            V RSSTEAEY S+A T+++L WI  LL  L + L   P ++CD V A  L  NPVFH+R 
Sbjct: 1332 VVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRM 1391

Query: 217  KHIEIDYHFVREKILRKDISIRYISSNNQLVDILTKPLLSPTFLHLRDKL 267
            KHI +DYHF+R ++    + + ++S+++QL D LTKPL    F +   K+
Sbjct: 1392 KHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQNFSRKI 1441

[Close]

BLAST of Pay0018628 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.1e-12
Identity = 37/96 (38.54%), Postives = 61/96 (63.54%), Query Frame = 0


Query: 157  VSRSSTEAEYCSLATTTADLYWIRQLLCVLHVPLKTSPTLWCDKVSAISLAHNPVFHART 216
            V+ S+TEAEY +   T  ++ W+++ L  L +  K    ++CD  SAI L+ N ++HART
Sbjct: 1215 VALSTTEAEYIAATETGKEMIWLKRFLQELGLHQK-EYVVYCDSQSAIDLSKNSMYHART 1274

Query: 217  KHIEIDYHFVREKILRKDISIRYISSNNQLVDILTK 253
            KHI++ YH++RE +  + + +  IS+N    D+LTK
Sbjct: 1275 KHIDVRYHWIREMVDDESLKVLKISTNENPADMLTK 1309

[Close]

BLAST of Pay0018628 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.9e-10
Identity = 34/97 (35.05%), Postives = 55/97 (56.70%), Query Frame = 0


Query: 51  DDIIVTGPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIYCIFVNQAKYLNDLLY 110
           DDI++TG     +++L  QL+  F + DLGP+ YFLG++I++    +F++Q KY   +L 
Sbjct: 8   DDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILN 67

Query: 111 TPGMTFAKSCITPMSTSLDLYTIAPPFNDPSLYRRLV 148
             GM   K   TP+   L+       + DPS +R +V
Sbjct: 68  NAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIV 104

[Close]

BLAST of Pay0018628 vs. ExPASy TrEMBL
Match: A0A5A7UZE5 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00300 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 2.2e-114
Identity = 249/437 (56.98%), Postives = 258/437 (59.04%), Query Frame = 0


Query: 1   MQTRAKSGIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQ---------- 60
           MQTRAKSGIFKPKAFHITTALPTPTSYTEASKYPEWRT MHEEFNALQAQ          
Sbjct: 324 MQTRAKSGIFKPKAFHITTALPTPTSYTEASKYPEWRTPMHEEFNALQAQGTWSLVPRLP 383

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 384 SMNVVGCKWVFRIKYNLDGTIARHKARLVAKGYHQETVYMTQPTGFQNKTCPNHVCLLHK 443

Query: 121 --------------------------------------------------DDIIVTGPDY 180
                                                             DDIIVTGPDY
Sbjct: 444 SLYGLKQAPRAWFERFTSYLFTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDY 503

Query: 181 LYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIYCIFVNQAKYLNDLLYTPGMTFAKSC 240
           LYIS LKNQLALEFKISDLGPLKYFLGLEIQSSI  I VNQA+YLNDLL+T GMT AKSC
Sbjct: 504 LYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQAEYLNDLLHTSGMTSAKSC 563

Query: 241 ITPMSTSLDLYTIAPPFNDPSLYRRLVRFLYKPF-------------------------- 275
           ITP+STSLDLYTIAPPFNDPSLYRRL  F++KP                           
Sbjct: 564 ITPISTSLDLYTIAPPFNDPSLYRRL--FMHKPTVIHFSAVKRILRYLCGDTSDRRSTSG 623

[Close]

BLAST of Pay0018628 vs. ExPASy TrEMBL
Match: A0A1S4DZJ0 (uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=LOC107991247 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.6e-112
Identity = 219/291 (75.26%), Postives = 227/291 (78.01%), Query Frame = 0


Query: 1   MQTRAKSGIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQDDIIVTGPDY 60
           MQTRAKSGIFKP AFHITTALPTPTSYTEASKYPEWRT MHEEFN LQAQDDIIVTGP Y
Sbjct: 1   MQTRAKSGIFKPNAFHITTALPTPTSYTEASKYPEWRTTMHEEFNVLQAQDDIIVTGPVY 60

Query: 61  LYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIYCIFVNQAKYLNDLLYTPGMTFAKSC 120
            YIS+LKNQLALEFKISDL PLKYFLGLEIQSSI  IFVNQAKYLNDLL+T GMT  KSC
Sbjct: 61  SYISLLKNQLALEFKISDLSPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSTKSC 120

Query: 121 ITPMSTSLDLYTIAPPFNDPSLYRRLVRFLY----------------------------- 180
           ITPMSTSLDLYTIAPPFNDPSLY RLV  L                              
Sbjct: 121 ITPMSTSLDLYTIAPPFNDPSLYCRLVGSLQYLTFTRPDIIFSVNRVIHLIDVPPAGFIA 180

Query: 181 -----------KPFSTVSRSSTEAEYCSLATTTADLYWIRQLLCVLHVPLKTSPTLWCDK 240
                      K  STVS SSTE EY SLATTT+DLYWIRQLLC LHVPLKTSPTLWCD 
Sbjct: 181 FLDSNPISWSSKKQSTVSHSSTEVEYRSLATTTSDLYWIRQLLCDLHVPLKTSPTLWCDN 240

Query: 241 VSAISLAHNPVFHARTKHIEIDYHFVREKILRKDISIRYISSNNQLVDILT 252
           VSAISL HNP+FHARTKHIEIDYHFVR+K+LRKDISIRYISSNN+LVDI +
Sbjct: 241 VSAISLTHNPIFHARTKHIEIDYHFVRKKVLRKDISIRYISSNNELVDIFS 291

[Close]

BLAST of Pay0018628 vs. ExPASy TrEMBL
Match: A0A5A7TPR4 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001410 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 8.5e-106
Identity = 251/505 (49.70%), Postives = 257/505 (50.89%), Query Frame = 0


Query: 1   MQTRAKSGIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQ---------- 60
           MQTRAKS IFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQ          
Sbjct: 152 MQTRAKSDIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQGTWSLVPRLP 211

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 212 SKNVVGCKWVFRIKYNPDGTIARHKARLVAKGYHQVQGFDFDETFSPVVKKPTIRIILAL 271

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 272 AAQYNWSLTQLDVKNDFFHGILQETVYMTQSTDFQDKTCPNHVCLLHKSLYADPSLFIRS 331

Query: 181 ------------DDIIVTGPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIYCIF 240
                       DDIIVTG DYLYI VLKNQLALEFKIS+LGPLKYFLGLEIQSSI  IF
Sbjct: 332 VGSFLSYLLLYVDDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIF 391

Query: 241 VNQAKYLNDLLYTPGMTFAKSCITPMSTSLDLYTIAPPFNDPSLYRRLV----------- 275
           VNQAKYLNDLL+T GMT AKSCITPMSTSLDLYTIAPPFNDP LYRRLV           
Sbjct: 392 VNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRP 451

[Close]

BLAST of Pay0018628 vs. ExPASy TrEMBL
Match: A0A5D3CA49 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G002060 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 1.1e-97
Identity = 222/380 (58.42%), Postives = 239/380 (62.89%), Query Frame = 0


Query: 1   MQTRAKSGIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQ---------D 60
           MQTRAKSGIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQ          
Sbjct: 1   MQTRAKSGIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQGTWCLVPRLP 60

Query: 61  DIIVTGPDYLY---------ISVLKNQLALE---------------------FKISDLGP 120
            + V G  +++         I+  K +L ++                       +S L  
Sbjct: 61  SMNVVGCKWVFRIKYNPDGTIAHHKARLVVKGYHQETVYMAQPTGFQDKTCPNHVSLLHK 120

Query: 121 LKYFLGLE---IQSSIYCIFVNQAKYLNDLLYTPGMTFAKSCITPMSTSLDLYTIAPPFN 180
             Y L      IQSSI  IF NQAKYLNDLL+T GMT AKSCITPMSTSLDLYTIAPPFN
Sbjct: 121 SLYVLSWSRNPIQSSIDGIFANQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFN 180

Query: 181 DPSLYRRLV---------------------RFLYKP----FS------------------ 240
           DPSLYRRLV                     +F++KP    FS                  
Sbjct: 181 DPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAVKRILRYLHGDTSDQRS 240

Query: 241 ---------------------TVSRSSTEAEYCSLATTTADLYWIRQLLCVLHVPLKTSP 275
                                TVSRSSTEAEY SLATTT DLYWI+QLLC LHVPLKTS 
Sbjct: 241 TSGFIAFLDSNPISWSSKKQPTVSRSSTEAEYRSLATTTTDLYWIQQLLCDLHVPLKTSQ 300

[Close]

BLAST of Pay0018628 vs. ExPASy TrEMBL
Match: A0A5A7VFU7 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold344G00330 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 1.3e-93
Identity = 206/332 (62.05%), Postives = 218/332 (65.66%), Query Frame = 0


Query: 7   SGIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQDDIIVTGPDYLYISVL 66
           S + K    HI  AL        A++Y  W     +  N     DDIIVTGPDYLYISVL
Sbjct: 21  SPVVKKSTIHIILAL--------AAQY-NWSLTQLDVKNVF-LHDDIIVTGPDYLYISVL 80

Query: 67  KNQLALEFKISDLGPLKYFLGLEIQSSIYCIFVNQAKYLNDLLYTPGMTFAKSCITPMST 126
           KNQLAL+FKISDLGPLKYFLGL+IQSSI  IFVNQAKYLNDLL+T  MT  KSCIT MST
Sbjct: 81  KNQLALDFKISDLGPLKYFLGLKIQSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMST 140

Query: 127 SLDLYTIAPPFNDPSLYRRLV---------------------RFLYKPF----------- 186
           SLDLYTI PPFNDPSLYRRLV                     +F++KP            
Sbjct: 141 SLDLYTITPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAIKRIL 200

Query: 187 --------------------------------STVSRSSTEAEYCSLATTTADLYWIRQL 246
                                           STVS SSTEAEYCSLATTTA+LYWIRQL
Sbjct: 201 RYLRGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQL 260

Query: 247 LCVLHVPLKTSPTLWCDKVSAISLAHNPVFHARTKHIEIDYHFVREKILRKDISIRYISS 275
           LC LHV LKTSPTLWCD VSAISLAHNPVFHARTKHIEI YHFVREK+L KDI I YISS
Sbjct: 261 LCDLHVSLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIYYHFVREKVLCKDIFIHYISS 320

[Close]

BLAST of Pay0018628 vs. NCBI nr
Match: KAA0061282.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK09861.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 421.8 bits (1083), Expect = 4.6e-114
Identity = 249/437 (56.98%), Postives = 258/437 (59.04%), Query Frame = 0


Query: 1   MQTRAKSGIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQ---------- 60
           MQTRAKSGIFKPKAFHITTALPTPTSYTEASKYPEWRT MHEEFNALQAQ          
Sbjct: 324 MQTRAKSGIFKPKAFHITTALPTPTSYTEASKYPEWRTPMHEEFNALQAQGTWSLVPRLP 383

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 384 SMNVVGCKWVFRIKYNLDGTIARHKARLVAKGYHQETVYMTQPTGFQNKTCPNHVCLLHK 443

Query: 121 --------------------------------------------------DDIIVTGPDY 180
                                                             DDIIVTGPDY
Sbjct: 444 SLYGLKQAPRAWFERFTSYLFTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDY 503

Query: 181 LYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIYCIFVNQAKYLNDLLYTPGMTFAKSC 240
           LYIS LKNQLALEFKISDLGPLKYFLGLEIQSSI  I VNQA+YLNDLL+T GMT AKSC
Sbjct: 504 LYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQAEYLNDLLHTSGMTSAKSC 563

Query: 241 ITPMSTSLDLYTIAPPFNDPSLYRRLVRFLYKPF-------------------------- 275
           ITP+STSLDLYTIAPPFNDPSLYRRL  F++KP                           
Sbjct: 564 ITPISTSLDLYTIAPPFNDPSLYRRL--FMHKPTVIHFSAVKRILRYLCGDTSDRRSTSG 623

[Close]

BLAST of Pay0018628 vs. NCBI nr
Match: XP_016901398.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo])

HSP 1 Score: 415.6 bits (1067), Expect = 3.3e-112
Identity = 219/291 (75.26%), Postives = 227/291 (78.01%), Query Frame = 0


Query: 1   MQTRAKSGIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQDDIIVTGPDY 60
           MQTRAKSGIFKP AFHITTALPTPTSYTEASKYPEWRT MHEEFN LQAQDDIIVTGP Y
Sbjct: 1   MQTRAKSGIFKPNAFHITTALPTPTSYTEASKYPEWRTTMHEEFNVLQAQDDIIVTGPVY 60

Query: 61  LYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIYCIFVNQAKYLNDLLYTPGMTFAKSC 120
            YIS+LKNQLALEFKISDL PLKYFLGLEIQSSI  IFVNQAKYLNDLL+T GMT  KSC
Sbjct: 61  SYISLLKNQLALEFKISDLSPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSTKSC 120

Query: 121 ITPMSTSLDLYTIAPPFNDPSLYRRLVRFLY----------------------------- 180
           ITPMSTSLDLYTIAPPFNDPSLY RLV  L                              
Sbjct: 121 ITPMSTSLDLYTIAPPFNDPSLYCRLVGSLQYLTFTRPDIIFSVNRVIHLIDVPPAGFIA 180

Query: 181 -----------KPFSTVSRSSTEAEYCSLATTTADLYWIRQLLCVLHVPLKTSPTLWCDK 240
                      K  STVS SSTE EY SLATTT+DLYWIRQLLC LHVPLKTSPTLWCD 
Sbjct: 181 FLDSNPISWSSKKQSTVSHSSTEVEYRSLATTTSDLYWIRQLLCDLHVPLKTSPTLWCDN 240

Query: 241 VSAISLAHNPVFHARTKHIEIDYHFVREKILRKDISIRYISSNNQLVDILT 252
           VSAISL HNP+FHARTKHIEIDYHFVR+K+LRKDISIRYISSNN+LVDI +
Sbjct: 241 VSAISLTHNPIFHARTKHIEIDYHFVRKKVLRKDISIRYISSNNELVDIFS 291

[Close]

BLAST of Pay0018628 vs. NCBI nr
Match: KAA0045362.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 393.3 bits (1009), Expect = 1.7e-105
Identity = 251/505 (49.70%), Postives = 257/505 (50.89%), Query Frame = 0


Query: 1   MQTRAKSGIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQ---------- 60
           MQTRAKS IFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQ          
Sbjct: 152 MQTRAKSDIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQGTWSLVPRLP 211

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 212 SKNVVGCKWVFRIKYNPDGTIARHKARLVAKGYHQVQGFDFDETFSPVVKKPTIRIILAL 271

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 272 AAQYNWSLTQLDVKNDFFHGILQETVYMTQSTDFQDKTCPNHVCLLHKSLYADPSLFIRS 331

Query: 181 ------------DDIIVTGPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIYCIF 240
                       DDIIVTG DYLYI VLKNQLALEFKIS+LGPLKYFLGLEIQSSI  IF
Sbjct: 332 VGSFLSYLLLYVDDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIF 391

Query: 241 VNQAKYLNDLLYTPGMTFAKSCITPMSTSLDLYTIAPPFNDPSLYRRLV----------- 275
           VNQAKYLNDLL+T GMT AKSCITPMSTSLDLYTIAPPFNDP LYRRLV           
Sbjct: 392 VNQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRP 451

[Close]

BLAST of Pay0018628 vs. NCBI nr
Match: TYK08058.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 366.3 bits (939), Expect = 2.3e-97
Identity = 222/380 (58.42%), Postives = 239/380 (62.89%), Query Frame = 0


Query: 1   MQTRAKSGIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQ---------D 60
           MQTRAKSGIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQ          
Sbjct: 1   MQTRAKSGIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQGTWCLVPRLP 60

Query: 61  DIIVTGPDYLY---------ISVLKNQLALE---------------------FKISDLGP 120
            + V G  +++         I+  K +L ++                       +S L  
Sbjct: 61  SMNVVGCKWVFRIKYNPDGTIAHHKARLVVKGYHQETVYMAQPTGFQDKTCPNHVSLLHK 120

Query: 121 LKYFLGLE---IQSSIYCIFVNQAKYLNDLLYTPGMTFAKSCITPMSTSLDLYTIAPPFN 180
             Y L      IQSSI  IF NQAKYLNDLL+T GMT AKSCITPMSTSLDLYTIAPPFN
Sbjct: 121 SLYVLSWSRNPIQSSIDGIFANQAKYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFN 180

Query: 181 DPSLYRRLV---------------------RFLYKP----FS------------------ 240
           DPSLYRRLV                     +F++KP    FS                  
Sbjct: 181 DPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAVKRILRYLHGDTSDQRS 240

Query: 241 ---------------------TVSRSSTEAEYCSLATTTADLYWIRQLLCVLHVPLKTSP 275
                                TVSRSSTEAEY SLATTT DLYWI+QLLC LHVPLKTS 
Sbjct: 241 TSGFIAFLDSNPISWSSKKQPTVSRSSTEAEYRSLATTTTDLYWIQQLLCDLHVPLKTSQ 300

[Close]

BLAST of Pay0018628 vs. NCBI nr
Match: KAA0065957.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK30272.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 352.8 bits (904), Expect = 2.6e-93
Identity = 206/332 (62.05%), Postives = 218/332 (65.66%), Query Frame = 0


Query: 7   SGIFKPKAFHITTALPTPTSYTEASKYPEWRTAMHEEFNALQAQDDIIVTGPDYLYISVL 66
           S + K    HI  AL        A++Y  W     +  N     DDIIVTGPDYLYISVL
Sbjct: 21  SPVVKKSTIHIILAL--------AAQY-NWSLTQLDVKNVF-LHDDIIVTGPDYLYISVL 80

Query: 67  KNQLALEFKISDLGPLKYFLGLEIQSSIYCIFVNQAKYLNDLLYTPGMTFAKSCITPMST 126
           KNQLAL+FKISDLGPLKYFLGL+IQSSI  IFVNQAKYLNDLL+T  MT  KSCIT MST
Sbjct: 81  KNQLALDFKISDLGPLKYFLGLKIQSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMST 140

Query: 127 SLDLYTIAPPFNDPSLYRRLV---------------------RFLYKPF----------- 186
           SLDLYTI PPFNDPSLYRRLV                     +F++KP            
Sbjct: 141 SLDLYTITPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAIKRIL 200

Query: 187 --------------------------------STVSRSSTEAEYCSLATTTADLYWIRQL 246
                                           STVS SSTEAEYCSLATTTA+LYWIRQL
Sbjct: 201 RYLRGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQL 260

Query: 247 LCVLHVPLKTSPTLWCDKVSAISLAHNPVFHARTKHIEIDYHFVREKILRKDISIRYISS 275
           LC LHV LKTSPTLWCD VSAISLAHNPVFHARTKHIEI YHFVREK+L KDI I YISS
Sbjct: 261 LCDLHVSLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIYYHFVREKVLCKDIFIHYISS 320

[Close]

BLAST of Pay0018628 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 97.1 bits (240), Expect = 2.4e-20
Identity = 81/270 (30.00%), Postives = 102/270 (37.78%), Query Frame = 0


Query: 51  DDIIVTGPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIYCIFVNQAKYLNDLLY 110
           DDII+   +   +  LK+QL   FK+ DLGPLKYFLGLEI  S   I + Q KY  DLL 
Sbjct: 285 DDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLD 344

Query: 111 TPGMTFAKSCITPMSTSLDLYT-IAPPFNDPSLYRRLV-RFLY----------------- 170
             G+   K    PM  S+         F D   YRRL+ R +Y                 
Sbjct: 345 ETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQ 404

Query: 171 ------------------------------------------------------------ 230
                                                                       
Sbjct: 405 FSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYC 464

[Close]

BLAST of Pay0018628 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 67.4 bits (163), Expect = 2.0e-11
Identity = 34/97 (35.05%), Postives = 55/97 (56.70%), Query Frame = 0


Query: 51  DDIIVTGPDYLYISVLKNQLALEFKISDLGPLKYFLGLEIQSSIYCIFVNQAKYLNDLLY 110
           DDI++TG     +++L  QL+  F + DLGP+ YFLG++I++    +F++Q KY   +L 
Sbjct: 8   DDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILN 67

Query: 111 TPGMTFAKSCITPMSTSLDLYTIAPPFNDPSLYRRLV 148
             GM   K   TP+   L+       + DPS +R +V
Sbjct: 68  NAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIV 104

The following BLAST results are available for this feature:

BLAST of Pay0018628 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04146	1.4e-20	24.32	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q94HW2	1.4e-20	45.45	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	2.3e-20	45.45	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	3.1e-12	38.54	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P92519	2.9e-10	35.05	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Pay0018628 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UZE5	2.2e-114	56.98	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S4DZJ0	1.6e-112	75.26	uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A5A7TPR4	8.5e-106	49.70	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3CA49	1.1e-97	58.42	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7VFU7	1.3e-93	62.05	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Pay0018628 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061282.1	4.6e-114	56.98	putative mitochondrial protein [Cucumis melo var. makuwa] >TYK09861.1 putative m...	[more]
XP_016901398.1	3.3e-112	75.26	PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]	[more]
KAA0045362.1	1.7e-105	49.70	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
TYK08058.1	2.3e-97	58.42	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0065957.1	2.6e-93	62.05	putative mitochondrial protein [Cucumis melo var. makuwa] >TYK30272.1 putative m...	[more]

BLAST of Pay0018628 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.4e-20	30.00	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	2.0e-11	35.05	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 51..124 e-value: 5.9E-12 score: 45.7
None	No IPR available	PANTHER	PTHR11439:SF343	SUBFAMILY NOT NAMED	coord: 135..266
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 135..266
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 155..254 e-value: 7.31159E-50 score: 159.171
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 44..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0018628.1	Pay0018628.1	mRNA