Pay0018553 (gene) Melon (Payzawat) v1

Overview


Name	Pay0018553
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Reverse transcriptase
Location	chr04: 20491929 .. 20494925 (-)
RNA-Seq Expression	Pay0018553
Synteny	Pay0018553

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGCAAGCTGCTCTAGCGCCGTTCCTCGCTGCTCAGCAGAACCAGGCCGCCCCTGTTCAGGACCAGCCTGTAGTCCCTCCAGCCCCTGTTCAGGACCAGCCTGTAGTCCCTCCAGCCCCTGTTCAGGACCAGCCCGTCATCCCTCCAGCCCCGGTGGAAGCTCAGCCGGTGCCAGTACAACTGTCAGCTGAGGCCAAGCACTTGAGGGATTTTAGGAAGTACAACCCGAAGACTTTCGACGGATCCTTGGACAACCCCTTTAGAGCCCAGCTGTGGTTGACATCCATAGAGACGATCTTCAGGTACATGAAGTGCCCAGAAGACCAGAAGGTGCAGTGTGCAGCTTTCTGTTTGGAGGATAGGGGGACTGCCTGGTGGGAGACTGCTGAGAGGGCGCTGGGAGGAGATGCCAGCAAGATCACATGGGAGCAATTCAGGGAGAGCTTTTATGCTAAGTTCTTCTCTGCCAACGTGAAGCACGCCAAGCTCCAAGAGTTCCTAAACTTGGAGCAAGGCAAACTGAGCGTGGAACAGTATGATGCCGAGTTCGACCTGTTGTCCCGTTTTGCCCCTGATGTGGTAAGGGATGAGGCCGCCAGGACTGAGAGATTTGTTAATGGCCTCAGGTTAGACCTCCAGGGTTTTGTACGAGCTCTTCGACCAACCACTCATGCGGATGCTCTACGCATAGCACTGGATCTGAGCCTGCATGAGAGAGCTGGTCAATCTAAGGTTGTCGGCACAGGGTCAGCCTCGGGACAGAAGAGGAAGGCGGAGGCGCAGCCCGACGTAATACCACAGCGGACTCCGAGGTCAGGAGGTGTCTTCCAGAGACACCGTCGGGAGCTGGCAGCAGCTGGGAGAACTTTGAGAGAGCTACCCACTTGTACTACCTGTGGGAAGGTCCATGGAGGACAATGTTTAGCTGGGAGTGGAGTCTGCTTCAGGTGCAGGCAGCCGGGGCACACCGCTGATGCGTGTCCTCGGAAACCCTTAGAGACGACGCCACGTCAGCCTTCTGCTCCCCAGCAAGGGAGAGTCTTTGCCACGAACCGGCAGGAGGCCGAGCGAGCTAGTACGGTGGTGACAGGTACGCTCCCAATCTTGGGGCATTATGCTTTGGTACTATTTGACTCGGGGTCATCGCATTCATTTATATCCTCTATTTTTGTCAAGCATGCGGGTTTAGAAGTAGAACCGTTGGGTAGTGCCTTGTCTGTCTCTACTCCTTCTGGAGAGGTCCTTTTGTCTAAGGAAAAAATAAGGGCATGTTGGGTAGAAATAGCAAACCATACCTTGAATGTAACTTTACTGGTGCTAGATATGCAAGATTTCGATGTAATTTTAGGCATGGATTGGTTGTCAACTAACCATGCAACCATAGACTGTTTTAATAAGGAAGTAGTCTTTAACCCTCCTTCCGGGGATAAGTTTAAGTTTAGAGGAGCAGGCATGGTAGGTATACCCAAGGTCATCTCAGCAATGAAGGCGAGTAAGCTACTTAGCCAGGGTACTTGGGGTATCTTGGCGAACGTAGTAGATATGGCAGAACCAGAAGTTTCCCTATCTTCCGAACCAGTAGTAAGGGAGTACCCTGACGTTTTCCCCGACGAACTCCCAGGACTTCCGCCTCCCAGGGAGGTAGACTTCGCCATTGAGTTAGAGCCCGGCACCGCCCCTATCTCTAGAGCTCCTTACAGAATGGCCCCAGCCGAGTTAAAGGAGTTGAAAGTCCAGTTACAGGAGCTGTTGGACAAGGGCTTTATCCGGCCCAGTGTATCACCTTGGGGAGCCCCAGTGTTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGCATTGACTACCGAGAATTGAACAAGGTGACAGTTAAGAACCGCTACCCCTTACCCAGAATCGAGGACCTGTTCGACCAGTTACAGGGGGCCACCGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGATATTCCCAAGACGGCCTTTCGTTCGAGGTACGGACACTACGAATTCATAGTGATGTCCTTTGGTTTAACTAATGCCCCTGCAGTGTTCATGGATTTGATGAACAGGGTGTTTAAGGACTTTCTAGACCAATTCGTCATAGTCTTCATTGACGATATCTTGATCTATTCCAAGACTGAGGCCGAACACGAAGAGCACTTGCACCAAGTCTTGGAGACCCTTCGAGCTCATAAGCTATACGCCAAGTTCTCCAAGTGTGAGTTCTGGTTAAAGAAGGTGACATTTTTAGGGCACGTGGTTTCCAGTGAGGGAGTCTCGGTGGACCCAGCTAAGGTCGAAGCGGTGACCAACTGGCCTCGACCGTCTACAGTCAGTGAGATTCGCAGTTTTCTGGGTCTGGCAGGATACTACAGGAGGTTTGTAGAAGACTTCTCACGCATAGCCAGCCCATTGACCCAGTTGACCAGGAAGGGAACCCCTTTTGTCTGGAGCCCAGCATGTGAGAGTAGTTTCCAAGAGCTTAAGCAGAAGCTAGTGACGGCACCAGTCCTGACAGTGCCTGATGGGTCGGGAAGTTTTGTGATCTATAGTGATGCCTCTAAGAAAGGACTGGGAGGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCGTATGCCTCACGCCAGTTGAAGAATCATGAGCGGAACTACCCTACCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGACCACAAGAGCCTGAAGTATTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAGGACTACGACTGCGAGATCCTGTACCATCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGCACATTCAGCAGCGCTAATCACGAAGCAGACCCCTTACTCAGGGATTTGGAGAGAGCCGAGATTGCAGTCTCAGTAG

mRNA sequence

ATGCTGCAAGCTGCTCTAGCGCCGTTCCTCGCTGCTCAGCAGAACCAGGCCGCCCCTGTTCAGGACCAGCCTGTAGTCCCTCCAGCCCCTGTTCAGGACCAGCCTGAAAAAATAAGGGCATGTTGGGTAGAAATAGCAAACCATACCTTGAATGTAACTTTACTGGTGCTAGATATGCAAGATTTCGATGTAATTTTAGGCATGGATTGGTTGTCAACTAACCATGCAACCATAGACTGTTTTAATAAGGAAGTAGTCTTTAACCCTCCTTCCGGGGATAAGTTTAAGTTTAGAGGAGCAGGCATGGTAGGTATACCCAAGGTCATCTCAGCAATGAAGGCGAGTAAGCTACTTAGCCAGGGTACTTGGGGTATCTTGGCGAACGTAGTAGATATGGCAGAACCAGAAGTTTCCCTATCTTCCGAACCAGTAGTAAGGGAGTACCCTGACGTTTTCCCCGACGAACTCCCAGGACTTCCGCCTCCCAGGGAGGTAGACTTCGCCATTGAGTTAGAGCCCGGCACCGCCCCTATCTCTAGAGCTCCTTACAGAATGGCCCCAGCCGAGTTAAAGGAGTTGAAAAAGGATGGGTCGATGCGCCTTTGCATTGACTACCGAGAATTGAACAAGGTGACAGTTAAGAACCGCTACCCCTTACCCAGAATCGAGGACCTGTTCGACCAGTTACAGGGGGCCACCGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGATATTCCCAAGACGGCCTTTCGTTCGAGGTACGGACACTACGAATTCATAGTGATGTCCTTTGGTTTAACTAATGCCCCTGCAGTGTTCATGGATTTGATGAACAGGGTGTTTAAGGACTTTCTAGACCAATTCGTCATAGTCTTCATTGACGATATCTTGATCTATTCCAAGACTGAGGCCGAACACGAAGAGCACTTGCACCAAGTGACATTTTTAGGGCACGTGGTTTCCAGTGAGGGAGTCTCGGTGGACCCAGCTAAGGTCGAAGCGGTGACCAACTGGCCTCGACCGTCTACAGTCAGTGAGATTCGCAGTTTTCTGGGTCTGGCAGGATACTACAGGAGGTTTGTAGAAGACTTCTCACGCATAGCCAGCCCATTGACCCAGTTGACCAGGAAGGGAACCCCTTTTGTCTGGAGCCCAGCATGTGAGAGTAGTTTCCAAGAGCTTAAGCAGAAGCTAGTGACGGCACCAGTCCTGACAGTGCCTGATGGGTCGGGAAGTTTTGTGATCTATAGTGATGCCTCTAAGAAAGGACTGGGAGGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCGTATGCCTCACGCCAGTTGAAGAATCATGAGCGGAACTACCCTACCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGACCACAAGAGCCTGAAGTATTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAGGACTACGACTGCGAGATCCTGTACCATCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGCACATTCAGCAGCGCTAATCACGAAGCAGACCCCTTACTCAGGGATTTGGAGAGAGCCGAGATTGCAGTCTCAGTAG

Coding sequence (CDS)

ATGCTGCAAGCTGCTCTAGCGCCGTTCCTCGCTGCTCAGCAGAACCAGGCCGCCCCTGTTCAGGACCAGCCTGTAGTCCCTCCAGCCCCTGTTCAGGACCAGCCTGAAAAAATAAGGGCATGTTGGGTAGAAATAGCAAACCATACCTTGAATGTAACTTTACTGGTGCTAGATATGCAAGATTTCGATGTAATTTTAGGCATGGATTGGTTGTCAACTAACCATGCAACCATAGACTGTTTTAATAAGGAAGTAGTCTTTAACCCTCCTTCCGGGGATAAGTTTAAGTTTAGAGGAGCAGGCATGGTAGGTATACCCAAGGTCATCTCAGCAATGAAGGCGAGTAAGCTACTTAGCCAGGGTACTTGGGGTATCTTGGCGAACGTAGTAGATATGGCAGAACCAGAAGTTTCCCTATCTTCCGAACCAGTAGTAAGGGAGTACCCTGACGTTTTCCCCGACGAACTCCCAGGACTTCCGCCTCCCAGGGAGGTAGACTTCGCCATTGAGTTAGAGCCCGGCACCGCCCCTATCTCTAGAGCTCCTTACAGAATGGCCCCAGCCGAGTTAAAGGAGTTGAAAAAGGATGGGTCGATGCGCCTTTGCATTGACTACCGAGAATTGAACAAGGTGACAGTTAAGAACCGCTACCCCTTACCCAGAATCGAGGACCTGTTCGACCAGTTACAGGGGGCCACCGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGATATTCCCAAGACGGCCTTTCGTTCGAGGTACGGACACTACGAATTCATAGTGATGTCCTTTGGTTTAACTAATGCCCCTGCAGTGTTCATGGATTTGATGAACAGGGTGTTTAAGGACTTTCTAGACCAATTCGTCATAGTCTTCATTGACGATATCTTGATCTATTCCAAGACTGAGGCCGAACACGAAGAGCACTTGCACCAAGTGACATTTTTAGGGCACGTGGTTTCCAGTGAGGGAGTCTCGGTGGACCCAGCTAAGGTCGAAGCGGTGACCAACTGGCCTCGACCGTCTACAGTCAGTGAGATTCGCAGTTTTCTGGGTCTGGCAGGATACTACAGGAGGTTTGTAGAAGACTTCTCACGCATAGCCAGCCCATTGACCCAGTTGACCAGGAAGGGAACCCCTTTTGTCTGGAGCCCAGCATGTGAGAGTAGTTTCCAAGAGCTTAAGCAGAAGCTAGTGACGGCACCAGTCCTGACAGTGCCTGATGGGTCGGGAAGTTTTGTGATCTATAGTGATGCCTCTAAGAAAGGACTGGGAGGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCGTATGCCTCACGCCAGTTGAAGAATCATGAGCGGAACTACCCTACCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGACCACAAGAGCCTGAAGTATTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAGGACTACGACTGCGAGATCCTGTACCATCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGCACATTCAGCAGCGCTAATCACGAAGCAGACCCCTTACTCAGGGATTTGGAGAGAGCCGAGATTGCAGTCTCAGTAG

Protein sequence

MLQAALAPFLAAQQNQAAPVQDQPVVPPAPVQDQPEKIRACWVEIANHTLNVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLHQVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPYSGIWREPRLQSQ

Homology

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BLAST of Pay0018553 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.3e-77
Identity = 154/420 (36.67%), Postives = 246/420 (58.57%), Query Frame = 0


Query: 163 REVDFAIE--LEPGTAPISRAPYRMAPAELKELKKDGS----MRLCIDYRELNKVTVKNR 222
           +EV+  I+  L  G    S +PY  +P  +   K+D S     R+ IDYR+LN++TV +R
Sbjct: 221 QEVESQIQDMLNQGIIRTSNSPYN-SPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDR 280

Query: 223 YPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLT 282
           +P+P ++++  +L     F+ IDL  G+HQ+ +    + KTAF +++GHYE++ M FGL 
Sbjct: 281 HPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLK 340

Query: 283 NAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHL----------------- 342
           NAPA F   MN + +  L++  +V++DDI+++S +  EH + L                 
Sbjct: 341 NAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLD 400

Query: 343 ------HQVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDF 402
                  + TFLGHV++ +G+  +P K+EA+  +P P+   EI++FLGL GYYR+F+ +F
Sbjct: 401 KCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNF 460

Query: 403 SRIASPLTQLTRKGTPF-VWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKG 462
           + IA P+T+  +K       +P  +S+F++LK  +   P+L VPD +  F + +DAS   
Sbjct: 461 ADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVA 520

Query: 463 LGGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKS 522
           LG VL Q G  ++Y SR L  HE NY T + EL A+V+A K +RHYL G   +I +DH+ 
Sbjct: 521 LGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQP 580

Query: 523 LKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPYS 553
           L + +  K+ N +  RW   + ++D +I Y  GK N VADALSR +      +++QT +S
Sbjct: 581 LSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSR-IKLEETYLSEQTQHS 638

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BLAST of Pay0018553 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.9e-73
Identity = 165/543 (30.39%), Postives = 281/543 (51.75%), Query Frame = 0


Query: 51  NVTLLVL-DMQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVI 110
           ++T  VL ++  FD I+G D L    A +D  N  ++  P  G K        + +  ++
Sbjct: 19  DITFFVLPNLHSFDGIIGDDTLKDLKAIVDRKNNCLIITP--GIKIPLLARASINVNPLL 78

Query: 111 SAM--------------KASKLLSQGTWGILANVVDMAEPEVSLSSEPVVREYPDVFPDE 170
           +A               +  ++      G+       AE   +       + YP  +P  
Sbjct: 79  AAEHPDGTQEILNSLLGEFPRIFEPPLSGMSVETAVKAEIRTNTQDPIYAKSYP--YPVN 138

Query: 171 LPGLPPPREVDFAIE---LEPGTAPISRAPYRMAPAELKELKKDGSMRLCIDYRELNKVT 230
           + G    R++D  ++   + P  +P + +P  + P + K    +   R+ +D++ LN VT
Sbjct: 139 MRG-EVERQIDELLQDGIIRPSNSPYN-SPIWIVPKKPKP-NGEKQYRMVVDFKRLNTVT 198

Query: 231 VKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMS 290
           + + YP+P I      L  A  F+ +DL SG+HQ+ +++ DIPKTAF +  G YEF+ + 
Sbjct: 199 IPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLP 258

Query: 291 FGLTNAPAVFMDLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLH------------ 350
           FGL NAPA+F  +++ + ++ + +   V+IDDI+++S+    H ++L             
Sbjct: 259 FGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQ 318

Query: 351 -----------QVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRF 410
                      QV FLG++V+++G+  DP KV A++  P P++V E++ FLG+  YYR+F
Sbjct: 319 VNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKF 378

Query: 411 VEDFSRIASPLTQLTR-----------KGTPFVWSPACESSFQELKQKLVTAPVLTVPDG 470
           ++D++++A PLT LTR              P         SF +LK  L ++ +L  P  
Sbjct: 379 IQDYAKVAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCF 438

Query: 471 SGSFVIYSDASKKGLGGVLMQ----QGKVVAYASRQLKNHERNYPTHDLELAAVVFALKI 530
           +  F + +DAS   +G VL Q    + + +AY SR L   E NY T + E+ A++++L  
Sbjct: 439 TKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDN 498

Query: 531 WRHYLYGE-KIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA 537
            R YLYG   I++YTDH+ L +    +  N + +RW   +++Y+CE++Y PGK+NVVADA
Sbjct: 499 LRAYLYGAGTIKVYTDHQPLTFALGNRNFNAKLKRWKARIEEYNCELIYKPGKSNVVADA 554

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BLAST of Pay0018553 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.4e-72
Identity = 145/394 (36.80%), Postives = 225/394 (57.11%), Query Frame = 0


Query: 171 LEPGTAPISRAPYRMAPAELKELKKDGS----MRLCIDYRELNKVTVKNRYPLPRIEDLF 230
           L  G    S +PY  +P  +   K D S     R+ IDYR+LN++T+ +RYP+P ++++ 
Sbjct: 230 LNQGLIRESNSPYN-SPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYPIPNMDEIL 289

Query: 231 DQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLM 290
            +L     F+ IDL  G+HQ+ + +  I KTAF ++ GHYE++ M FGL NAPA F   M
Sbjct: 290 GKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQRCM 349

Query: 291 NRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHLH-----------------------QVT 350
           N + +  L++  +V++DDI+I+S +  EH   +                        +  
Sbjct: 350 NNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKCEFLKKEAN 409

Query: 351 FLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQL 410
           FLGH+V+ +G+  +P KV+A+ ++P P+   EIR+FLGL GYYR+F+ +++ IA P+T  
Sbjct: 410 FLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYADIAKPMTSC 469

Query: 411 TRKGTPF-VWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGGVLMQQGK 470
            +K T           +F++LK  ++  P+L +PD    FV+ +DAS   LG VL Q G 
Sbjct: 470 LKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALGAVLSQNGH 529

Query: 471 VVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKEL 530
            +++ SR L +HE NY   + EL A+V+A K +RHYL G +  I +DH+ L++    KE 
Sbjct: 530 PISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPLRWLHNLKEP 589

Query: 531 NMRQRRWLELVKDYDCEILYHPGKANVVADALSR 537
             +  RW   + +Y  +I Y  GK N VADALSR
Sbjct: 590 GAKLERWRVRLSEYQFKIDYIKGKENSVADALSR 622

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BLAST of Pay0018553 vs. ExPASy Swiss-Prot
Match: P10401 (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 4.0e-67
Identity = 176/590 (29.83%), Postives = 291/590 (49.32%), Query Frame = 0


Query: 12  AQQNQAAPVQD----QPVVPP---APVQDQPEKIRACWVEIANHTLNVTLLVLDMQDFDV 71
           A +N   PV++     PV  P   + +    E    C +++  H ++   L+  +  FD 
Sbjct: 32  AAKNYIRPVKELKNVMPVASPFSVSSIHGSTEIKHKCLMKVFKH-ISPFFLLDSLNAFDA 91

Query: 72  ILGMDWLSTNHATIDCFNKEV----------VFNPPSGDKFKFRGAGMVGIPKVI----- 131
           I+G+D L+     ++     +           F+ PS     F     + +P  +     
Sbjct: 92  IIGLDLLTQAGVKLNLAEDSLEYQGIAEKLHYFSCPS---VNFTDVNDIVVPDSVKKEFK 151

Query: 132 -SAMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVV-REYPDVFPDELPGLPPPREVDF 191
            + ++  K  S     +  N    A    ++ +EPV  R YP      L G+      + 
Sbjct: 152 DTIIRRKKAFSTTNEALPFNTAVTATIR-TVDNEPVYSRAYP-----TLMGVSDFVNNEV 211

Query: 192 AIELEPGTAPISRAPYRMAPAELKELKKDG----SMRLCIDYRELNKVTVKNRYPLPRIE 251
              L+ G    SR+PY      + +   D     + RL ID+R+LN+ T+ +RYP+P I 
Sbjct: 212 KQLLKDGIIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLVIDFRKLNEKTIPDRYPMPSIP 271

Query: 252 DLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFM 311
            +   L  A  F+ +DL+SGYHQ+ + + D  KT+F    G YEF  + FGL NA ++F 
Sbjct: 272 MILANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQ 331

Query: 312 DLMNRVFKDFLDQFVIVFIDDILIYSKTEAEHEEHL-----------------------H 371
             ++ V ++ + +   V++DD++I+S+ E++H  H+                        
Sbjct: 332 RALDDVLREQIGKICYVYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKE 391

Query: 372 QVTFLGHVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPL 431
            V +LG +VS +G   DP KV+A+  +P P  V ++RSFLGLA YYR F++DF+ IA P+
Sbjct: 392 SVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDFAAIARPI 451

Query: 432 TQLTR-----------KGTPFVWSPACESSFQELKQKLVTAPV-LTVPDGSGSFVIYSDA 491
           T + +           K  P  ++    ++FQ L+  L +  V L  PD    F + +DA
Sbjct: 452 TDILKGENGSVSKHMSKKIPVEFNETQRNAFQRLRNILASEDVILKYPDFKKPFDLTTDA 511

Query: 492 SKKGLGGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAVVFALKIWRHYLYGEK-IQIY 538
           S  G+G VL Q+G+ +   SR LK  E+NY T++ EL A+V+AL   +++LYG + I I+
Sbjct: 512 SASGIGAVLSQEGRPITMISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIF 571

[Close]

BLAST of Pay0018553 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.5e-66
Identity = 155/448 (34.60%), Postives = 233/448 (52.01%), Query Frame = 0


Query: 134 EPEVSLSSEPV---VREYPDVFPDELPGLPPPREVDFAIELEPG--------TAPISRAP 193
           E EV L+ E     +R YP         LPP +      E+  G        +  I+  P
Sbjct: 401 EFEVELTQENYRLPIRNYP---------LPPGKMQAMNDEINQGLKSGIIRESKAINACP 460

Query: 194 YRMAPAELKELKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRS 253
               P      KK+G++R+ +DY+ LNK    N YPLP IE L  ++QG+T+F+K+DL+S
Sbjct: 461 VMFVP------KKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKS 520

Query: 254 GYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFVIVFI 313
            YH +R+R GD  K AFR   G +E++VM +G++ APA F   +N +  +  +  V+ ++
Sbjct: 521 AYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYM 580

Query: 314 DDILIYSKTEAEH-----------------------EEHLHQVTFLGHVVSSEGVSVDPA 373
           DDILI+SK+E+EH                       E H  QV F+G+ +S +G +    
Sbjct: 581 DDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQE 640

Query: 374 KVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESS 433
            ++ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P    +
Sbjct: 641 NIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQA 700

Query: 434 FQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGGVLMQQGK-----VVAYASRQLKNH 493
            + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   
Sbjct: 701 IENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKA 760

Query: 494 ERNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWL 539
           + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW 
Sbjct: 761 QLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQ 820

[Close]

BLAST of Pay0018553 vs. ExPASy TrEMBL
Match: A0A5A7TP01 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1484G00070 PE=4 SV=1)

HSP 1 Score: 1013.1 bits (2618), Expect = 4.6e-292
Identity = 517/575 (89.91%), Postives = 517/575 (89.91%), Query Frame = 0


Query: 27   PPAPVQDQPEKIRACWVEIANHTLNVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVV 86
            P   V    EKIRACWVEIANHTLNVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVV
Sbjct: 458  PSGEVLLSKEKIRACWVEIANHTLNVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVV 517

Query: 87   FNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVR 146
            FNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVR
Sbjct: 518  FNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVR 577

Query: 147  EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKEL------------- 206
            EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKEL             
Sbjct: 578  EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFI 637

Query: 207  ---------------KKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKI 266
                           KKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKI
Sbjct: 638  RPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKI 697

Query: 267  DLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV 326
            DLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
Sbjct: 698  DLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV 757

Query: 327  IVFIDDILIYSKTEAEHEEHLHQ-----------------------VTFLGHVVSSEGVS 386
            IVFIDDILIYSKTEAEHEEHLHQ                       VTFLGHVVSSEGVS
Sbjct: 758  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVS 817

Query: 387  VDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA 446
            VDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA
Sbjct: 818  VDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA 877

Query: 447  CESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGGVLMQQGKVVAYASRQLKNHE 506
            CESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGGVLMQQGKVVAYASRQLKNHE
Sbjct: 878  CESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGGVLMQQGKVVAYASRQLKNHE 937

Query: 507  RNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 551
            RNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD
Sbjct: 938  RNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 997

[Close]

BLAST of Pay0018553 vs. ExPASy TrEMBL
Match: A0A5A7TP01 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1484G00070 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.2e-07
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0


Query: 1  MLQAALAPFLAAQQNQAAPVQDQPVVPPAPVQDQP 36
          MLQAALAPFLAAQQNQAAPVQDQPVVPPAPVQDQP
Sbjct: 59 MLQAALAPFLAAQQNQAAPVQDQPVVPPAPVQDQP 93

HSP 2 Score: 960.7 bits (2482), Expect = 2.7e-276
Identity = 492/575 (85.57%), Postives = 503/575 (87.48%), Query Frame = 0


Query: 27  PPAPVQDQPEKIRACWVEIANHTLNVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVV 86
           P   V    E+I+AC VEIAN  L+VTLLVLDMQDFDVILGMDWLS NHA IDCF KEVV
Sbjct: 413 PSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVV 472

Query: 87  FNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVR 146
           FNPPSG  FKFRGAGMV IPKVISAMKASKLLSQGTWGILA+VVD+ EPEVSLSSEPVVR
Sbjct: 473 FNPPSGASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVR 532

Query: 147 EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKEL------------- 206
           EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKEL             
Sbjct: 533 EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFI 592

Query: 207 ---------------KKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKI 266
                          KKDGSMRLCIDYRELNKVTVKNRYPLP+I+DLFDQLQGATVFSKI
Sbjct: 593 RPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKI 652

Query: 267 DLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV 326
           DLRSGYHQLRIRDGDIPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD FV
Sbjct: 653 DLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFV 712

Query: 327 IVFIDDILIYSKTEAEHEEHLHQ-----------------------VTFLGHVVSSEGVS 386
           IVFIDDILIYSKTEAEHEEHLHQ                       VTFLGHVVSSEGVS
Sbjct: 713 IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVS 772

Query: 387 VDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA 446
           VDPAK+EAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA
Sbjct: 773 VDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA 832

Query: 447 CESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGGVLMQQGKVVAYASRQLKNHE 506
           CESSFQELKQKLV APVLTVPDGSG+FVIYSDASKKGLG VLMQQGKVVAYASRQLK HE
Sbjct: 833 CESSFQELKQKLVIAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHE 892

Query: 507 RNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 551
           +NYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD
Sbjct: 893 QNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 952

[Close]

BLAST of Pay0018553 vs. ExPASy TrEMBL
Match: A0A5A7TG62 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold262G001030 PE=4 SV=1)

HSP 1 Score: 960.3 bits (2481), Expect = 3.6e-276
Identity = 490/575 (85.22%), Postives = 502/575 (87.30%), Query Frame = 0


Query: 27   PPAPVQDQPEKIRACWVEIANHTLNVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVV 86
            P   V    EKI+ACWVEIANH L+VTLLVLDMQDFDVILGMDWLS NH  I+CF KEVV
Sbjct: 448  PSGEVLLSKEKIKACWVEIANHMLDVTLLVLDMQDFDVILGMDWLSANHENINCFGKEVV 507

Query: 87   FNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVR 146
            FNPPSG  FKFRGAGMV IPKVISAMKASKLLSQGTWGILA+VVD+ EPEVSLSSEPVVR
Sbjct: 508  FNPPSGASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVR 567

Query: 147  EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKEL------------- 206
            EYPDVF DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKEL             
Sbjct: 568  EYPDVFSDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFI 627

Query: 207  ---------------KKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKI 266
                           KKDGSMRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKI
Sbjct: 628  RPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI 687

Query: 267  DLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV 326
            DLRSGYHQLRIRDGDIPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD FV
Sbjct: 688  DLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFV 747

Query: 327  IVFIDDILIYSKTEAEHEEHLHQ-----------------------VTFLGHVVSSEGVS 386
            IVFIDDILIYSKTEAEHEEHLHQ                       VTFLGHVVSSEGVS
Sbjct: 748  IVFIDDILIYSKTEAEHEEHLHQVLETLRANNLYAKFSKCEFWLRKVTFLGHVVSSEGVS 807

Query: 387  VDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA 446
            VDPAK+EAVTNWPRPSTVSEI+SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA
Sbjct: 808  VDPAKIEAVTNWPRPSTVSEIQSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA 867

Query: 447  CESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGGVLMQQGKVVAYASRQLKNHE 506
            CESSFQELKQKLVTAPVLTVPDGSG+FVIYSDASKKGLG VLMQQGKVVAYASRQLK +E
Sbjct: 868  CESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIYE 927

Query: 507  RNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 551
            +NYPTHDLEL AVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD
Sbjct: 928  QNYPTHDLELVAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 987

[Close]

BLAST of Pay0018553 vs. ExPASy TrEMBL
Match: A0A5A7UUX8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1395G00080 PE=4 SV=1)

HSP 1 Score: 959.5 bits (2479), Expect = 6.1e-276
Identity = 490/575 (85.22%), Postives = 502/575 (87.30%), Query Frame = 0


Query: 27  PPAPVQDQPEKIRACWVEIANHTLNVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVV 86
           P   V    E+I+ACWVEIANH L+VTLLVLDMQDFDVILGMDWLS NHA IDCF KEVV
Sbjct: 415 PSGEVLLSKEQIKACWVEIANHMLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVV 474

Query: 87  FNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVR 146
           FNPPSG  FKFRGAGMV IPKVISAMKASKLLSQGTWGILA+VVD+ EPEVSLSSEPVVR
Sbjct: 475 FNPPSGASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVR 534

Query: 147 EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKEL------------- 206
           EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKEL             
Sbjct: 535 EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFI 594

Query: 207 ---------------KKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKI 266
                          KKDGSMRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKI
Sbjct: 595 RPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI 654

Query: 267 DLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV 326
           DLRSGYHQLRIRDGDIPKTAFR RYGHYEF+VMSFGLTN PAVFMDLMNRVFKDFLD FV
Sbjct: 655 DLRSGYHQLRIRDGDIPKTAFRLRYGHYEFVVMSFGLTNTPAVFMDLMNRVFKDFLDSFV 714

Query: 327 IVFIDDILIYSKTEAEHEEHLHQ-----------------------VTFLGHVVSSEGVS 386
           IVFIDDILIYSKTEAEHEEHLHQ                       VTFLGHVVSSEGVS
Sbjct: 715 IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVS 774

Query: 387 VDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA 446
           VDPAK+EAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA
Sbjct: 775 VDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA 834

Query: 447 CESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGGVLMQQGKVVAYASRQLKNHE 506
           CESSFQELKQKLVTAPVLTVPDGS +FVIYSDASKKGLG VLMQQGKVVAYASRQLK HE
Sbjct: 835 CESSFQELKQKLVTAPVLTVPDGSENFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHE 894

Query: 507 RNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 551
           +NY THDLELAAVVFALK+WRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD
Sbjct: 895 QNYLTHDLELAAVVFALKMWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 954

[Close]

BLAST of Pay0018553 vs. ExPASy TrEMBL
Match: A0A5A7SIJ5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G003210 PE=4 SV=1)

HSP 1 Score: 957.6 bits (2474), Expect = 2.3e-275
Identity = 491/575 (85.39%), Postives = 501/575 (87.13%), Query Frame = 0


Query: 27   PPAPVQDQPEKIRACWVEIANHTLNVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVV 86
            P   V    E+I+AC VEI N  L+VTLLVLDMQDFDVILGMDWLS NHA IDCF KEVV
Sbjct: 441  PSGEVLLSKEQIKACRVEITNRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVV 500

Query: 87   FNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVR 146
            FNPPSG  FKFRGAGMV IPKVISAMKASKLLSQGTWGILA+VVD+ EPEVSLSSEPVVR
Sbjct: 501  FNPPSGASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVR 560

Query: 147  EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKEL------------- 206
            EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKEL             
Sbjct: 561  EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFI 620

Query: 207  ---------------KKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKI 266
                           KKDGSMRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKI
Sbjct: 621  RPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI 680

Query: 267  DLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV 326
            DLRSGYHQLRIRDGDIPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD FV
Sbjct: 681  DLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFV 740

Query: 327  IVFIDDILIYSKTEAEHEEHLHQ-----------------------VTFLGHVVSSEGVS 386
            IVFIDDILIYSKTEAEHEEHLHQ                       VTFLGHVVSSEGVS
Sbjct: 741  IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVS 800

Query: 387  VDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA 446
            VDPAK+EAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA
Sbjct: 801  VDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA 860

Query: 447  CESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGGVLMQQGKVVAYASRQLKNHE 506
            CE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASKKGLG VLMQQGKVVAYASRQLK HE
Sbjct: 861  CERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHE 920

Query: 507  RNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 551
            +NYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD
Sbjct: 921  QNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 980

[Close]

BLAST of Pay0018553 vs. NCBI nr
Match: KAA0025917.1 (pol protein [Cucumis melo var. makuwa] >KAA0042949.1 pol protein [Cucumis melo var. makuwa] >KAA0048622.1 pol protein [Cucumis melo var. makuwa] >KAA0056306.1 pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1013.1 bits (2618), Expect = 9.6e-292
Identity = 517/575 (89.91%), Postives = 517/575 (89.91%), Query Frame = 0


Query: 27   PPAPVQDQPEKIRACWVEIANHTLNVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVV 86
            P   V    EKIRACWVEIANHTLNVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVV
Sbjct: 458  PSGEVLLSKEKIRACWVEIANHTLNVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVV 517

Query: 87   FNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVR 146
            FNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVR
Sbjct: 518  FNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVR 577

Query: 147  EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKEL------------- 206
            EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKEL             
Sbjct: 578  EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFI 637

Query: 207  ---------------KKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKI 266
                           KKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKI
Sbjct: 638  RPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKI 697

Query: 267  DLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV 326
            DLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV
Sbjct: 698  DLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV 757

Query: 327  IVFIDDILIYSKTEAEHEEHLHQ-----------------------VTFLGHVVSSEGVS 386
            IVFIDDILIYSKTEAEHEEHLHQ                       VTFLGHVVSSEGVS
Sbjct: 758  IVFIDDILIYSKTEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVS 817

Query: 387  VDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA 446
            VDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA
Sbjct: 818  VDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA 877

Query: 447  CESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGGVLMQQGKVVAYASRQLKNHE 506
            CESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGGVLMQQGKVVAYASRQLKNHE
Sbjct: 878  CESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGGVLMQQGKVVAYASRQLKNHE 937

Query: 507  RNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 551
            RNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD
Sbjct: 938  RNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 997

[Close]

BLAST of Pay0018553 vs. NCBI nr
Match: KAA0025917.1 (pol protein [Cucumis melo var. makuwa] >KAA0042949.1 pol protein [Cucumis melo var. makuwa] >KAA0048622.1 pol protein [Cucumis melo var. makuwa] >KAA0056306.1 pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 67.4 bits (163), Expect = 4.5e-07
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0


Query: 1  MLQAALAPFLAAQQNQAAPVQDQPVVPPAPVQDQP 36
          MLQAALAPFLAAQQNQAAPVQDQPVVPPAPVQDQP
Sbjct: 59 MLQAALAPFLAAQQNQAAPVQDQPVVPPAPVQDQP 93

HSP 2 Score: 960.7 bits (2482), Expect = 5.6e-276
Identity = 492/575 (85.57%), Postives = 503/575 (87.48%), Query Frame = 0


Query: 27  PPAPVQDQPEKIRACWVEIANHTLNVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVV 86
           P   V    E+I+AC VEIAN  L+VTLLVLDMQDFDVILGMDWLS NHA IDCF KEVV
Sbjct: 413 PSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVV 472

Query: 87  FNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVR 146
           FNPPSG  FKFRGAGMV IPKVISAMKASKLLSQGTWGILA+VVD+ EPEVSLSSEPVVR
Sbjct: 473 FNPPSGASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVR 532

Query: 147 EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKEL------------- 206
           EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKEL             
Sbjct: 533 EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFI 592

Query: 207 ---------------KKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKI 266
                          KKDGSMRLCIDYRELNKVTVKNRYPLP+I+DLFDQLQGATVFSKI
Sbjct: 593 RPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKI 652

Query: 267 DLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV 326
           DLRSGYHQLRIRDGDIPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD FV
Sbjct: 653 DLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFV 712

Query: 327 IVFIDDILIYSKTEAEHEEHLHQ-----------------------VTFLGHVVSSEGVS 386
           IVFIDDILIYSKTEAEHEEHLHQ                       VTFLGHVVSSEGVS
Sbjct: 713 IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVS 772

Query: 387 VDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA 446
           VDPAK+EAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA
Sbjct: 773 VDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA 832

Query: 447 CESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGGVLMQQGKVVAYASRQLKNHE 506
           CESSFQELKQKLV APVLTVPDGSG+FVIYSDASKKGLG VLMQQGKVVAYASRQLK HE
Sbjct: 833 CESSFQELKQKLVIAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHE 892

Query: 507 RNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 551
           +NYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD
Sbjct: 893 QNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 952

[Close]

BLAST of Pay0018553 vs. NCBI nr
Match: KAA0040547.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 960.3 bits (2481), Expect = 7.4e-276
Identity = 490/575 (85.22%), Postives = 502/575 (87.30%), Query Frame = 0


Query: 27   PPAPVQDQPEKIRACWVEIANHTLNVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVV 86
            P   V    EKI+ACWVEIANH L+VTLLVLDMQDFDVILGMDWLS NH  I+CF KEVV
Sbjct: 448  PSGEVLLSKEKIKACWVEIANHMLDVTLLVLDMQDFDVILGMDWLSANHENINCFGKEVV 507

Query: 87   FNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVR 146
            FNPPSG  FKFRGAGMV IPKVISAMKASKLLSQGTWGILA+VVD+ EPEVSLSSEPVVR
Sbjct: 508  FNPPSGASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVR 567

Query: 147  EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKEL------------- 206
            EYPDVF DELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKEL             
Sbjct: 568  EYPDVFSDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFI 627

Query: 207  ---------------KKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKI 266
                           KKDGSMRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKI
Sbjct: 628  RPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI 687

Query: 267  DLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV 326
            DLRSGYHQLRIRDGDIPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD FV
Sbjct: 688  DLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFV 747

Query: 327  IVFIDDILIYSKTEAEHEEHLHQ-----------------------VTFLGHVVSSEGVS 386
            IVFIDDILIYSKTEAEHEEHLHQ                       VTFLGHVVSSEGVS
Sbjct: 748  IVFIDDILIYSKTEAEHEEHLHQVLETLRANNLYAKFSKCEFWLRKVTFLGHVVSSEGVS 807

Query: 387  VDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA 446
            VDPAK+EAVTNWPRPSTVSEI+SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA
Sbjct: 808  VDPAKIEAVTNWPRPSTVSEIQSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA 867

Query: 447  CESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGGVLMQQGKVVAYASRQLKNHE 506
            CESSFQELKQKLVTAPVLTVPDGSG+FVIYSDASKKGLG VLMQQGKVVAYASRQLK +E
Sbjct: 868  CESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIYE 927

Query: 507  RNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 551
            +NYPTHDLEL AVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD
Sbjct: 928  QNYPTHDLELVAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 987

[Close]

BLAST of Pay0018553 vs. NCBI nr
Match: KAA0059723.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 959.5 bits (2479), Expect = 1.3e-275
Identity = 490/575 (85.22%), Postives = 502/575 (87.30%), Query Frame = 0


Query: 27  PPAPVQDQPEKIRACWVEIANHTLNVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVV 86
           P   V    E+I+ACWVEIANH L+VTLLVLDMQDFDVILGMDWLS NHA IDCF KEVV
Sbjct: 415 PSGEVLLSKEQIKACWVEIANHMLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVV 474

Query: 87  FNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVR 146
           FNPPSG  FKFRGAGMV IPKVISAMKASKLLSQGTWGILA+VVD+ EPEVSLSSEPVVR
Sbjct: 475 FNPPSGASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVR 534

Query: 147 EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKEL------------- 206
           EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKEL             
Sbjct: 535 EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFI 594

Query: 207 ---------------KKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKI 266
                          KKDGSMRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKI
Sbjct: 595 RPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI 654

Query: 267 DLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV 326
           DLRSGYHQLRIRDGDIPKTAFR RYGHYEF+VMSFGLTN PAVFMDLMNRVFKDFLD FV
Sbjct: 655 DLRSGYHQLRIRDGDIPKTAFRLRYGHYEFVVMSFGLTNTPAVFMDLMNRVFKDFLDSFV 714

Query: 327 IVFIDDILIYSKTEAEHEEHLHQ-----------------------VTFLGHVVSSEGVS 386
           IVFIDDILIYSKTEAEHEEHLHQ                       VTFLGHVVSSEGVS
Sbjct: 715 IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVS 774

Query: 387 VDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA 446
           VDPAK+EAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA
Sbjct: 775 VDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA 834

Query: 447 CESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGGVLMQQGKVVAYASRQLKNHE 506
           CESSFQELKQKLVTAPVLTVPDGS +FVIYSDASKKGLG VLMQQGKVVAYASRQLK HE
Sbjct: 835 CESSFQELKQKLVTAPVLTVPDGSENFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHE 894

Query: 507 RNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 551
           +NY THDLELAAVVFALK+WRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD
Sbjct: 895 QNYLTHDLELAAVVFALKMWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 954

[Close]

BLAST of Pay0018553 vs. NCBI nr
Match: KAA0025998.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 957.6 bits (2474), Expect = 4.8e-275
Identity = 491/575 (85.39%), Postives = 501/575 (87.13%), Query Frame = 0


Query: 27   PPAPVQDQPEKIRACWVEIANHTLNVTLLVLDMQDFDVILGMDWLSTNHATIDCFNKEVV 86
            P   V    E+I+AC VEI N  L+VTLLVLDMQDFDVILGMDWLS NHA IDCF KEVV
Sbjct: 441  PSGEVLLSKEQIKACRVEITNRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVV 500

Query: 87   FNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILANVVDMAEPEVSLSSEPVVR 146
            FNPPSG  FKFRGAGMV IPKVISAMKASKLLSQGTWGILA+VVD+ EPEVSLSSEPVVR
Sbjct: 501  FNPPSGASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVR 560

Query: 147  EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKEL------------- 206
            EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKEL             
Sbjct: 561  EYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFI 620

Query: 207  ---------------KKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKI 266
                           KKDGSMRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKI
Sbjct: 621  RPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI 680

Query: 267  DLRSGYHQLRIRDGDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDQFV 326
            DLRSGYHQLRIRDGDIPKTAFRSRYGHYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD FV
Sbjct: 681  DLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFV 740

Query: 327  IVFIDDILIYSKTEAEHEEHLHQ-----------------------VTFLGHVVSSEGVS 386
            IVFIDDILIYSKTEAEHEEHLHQ                       VTFLGHVVSSEGVS
Sbjct: 741  IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVS 800

Query: 387  VDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA 446
            VDPAK+EAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA
Sbjct: 801  VDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPA 860

Query: 447  CESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGGVLMQQGKVVAYASRQLKNHE 506
            CE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASKKGLG VLMQQGKVVAYASRQLK HE
Sbjct: 861  CERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHE 920

Query: 507  RNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 551
            +NYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD
Sbjct: 921  QNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 980

[Close]

BLAST of Pay0018553 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 1.4e-22
Identity = 49/105 (46.67%), Postives = 69/105 (65.71%), Query Frame = 0


Query: 321 QVTFLG--HVVSSEGVSVDPAKVEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIAS 380
           Q+ +LG  H++S EGVS DPAK+EA+  WP P   +E+R FLGL GYYRRFV+++ +I  
Sbjct: 29  QIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKNTTELRGFLGLTGYYRRFVKNYGKIVR 88

Query: 381 PLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFV 424
           PLT+L +K +   W+     +F+ LK  + T PVL +PD    FV
Sbjct: 89  PLTELLKKNS-LKWTEMAALAFKALKGAVTTLPVLALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Pay0018553 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	3.3e-77	36.67	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
Q8I7P9	2.9e-73	30.39	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P20825	1.4e-72	36.80	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P10401	4.0e-67	29.83	Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogas...	[more]
P0CT41	4.5e-66	34.60	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]

BLAST of Pay0018553 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TP01	4.6e-292	89.91	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold14...	[more]
A0A5A7TP01	2.2e-07	100.00	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold14...	[more]
A0A5A7TG62	3.6e-276	85.22	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold26...	[more]
A0A5A7UUX8	6.1e-276	85.22	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7SIJ5	2.3e-275	85.39	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34...	[more]

BLAST of Pay0018553 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025917.1	9.6e-292	89.91	pol protein [Cucumis melo var. makuwa] >KAA0042949.1 pol protein [Cucumis melo v...	[more]
KAA0025917.1	4.5e-07	100.00	pol protein [Cucumis melo var. makuwa] >KAA0042949.1 pol protein [Cucumis melo v...	[more]
KAA0040547.1	7.4e-276	85.22	pol protein [Cucumis melo var. makuwa]	[more]
KAA0059723.1	1.3e-275	85.22	pol protein [Cucumis melo var. makuwa]	[more]
KAA0025998.1	4.8e-275	85.39	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Pay0018553 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.4e-22	46.67	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 194..346 e-value: 7.8E-22 score: 77.9
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 174..364 score: 10.741026
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 426..548 e-value: 4.6E-5 score: 25.2
None	No IPR available	PFAM	PF08284	RVP_2	coord: 39..90 e-value: 8.2E-16 score: 58.0
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 194..277 e-value: 1.6E-57 score: 196.3
None	No IPR available	PANTHER	PTHR24559:SF383	DNA/RNA POLYMERASES SUPERFAMILY PROTEIN	coord: 43..210 coord: 324..541
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 43..210
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 324..541
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 37..71 e-value: 4.69536E-7 score: 46.1756
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 423..538 e-value: 4.81336E-61 score: 195.404
None	No IPR available	CDD	cd01647	RT_LTR	coord: 194..329 e-value: 1.4072E-70 score: 222.471
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 15..97 e-value: 5.3E-13 score: 50.8
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 38..80
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 420..516 e-value: 1.6E-34 score: 118.4
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 343..425 e-value: 8.7E-33 score: 114.2
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 217..342 e-value: 1.6E-57 score: 196.3
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 144..522

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0018553.1	Pay0018553.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding