Pay0018479 (gene) Melon (Payzawat) v1

Overview


Name	Pay0018479
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	RNA polymerase II subunit 5-mediating protein-like protein isoform X1
Location	chr11: 18950533 .. 18955876 (-)
RNA-Seq Expression	Pay0018479
Synteny	Pay0018479

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCAGGACGCGTAAAGGGAACAGTGACGCCGTTATCCTCCTTATTTCCGGCTCAGGATGCCCGCAAGGCTGCGTCGCGCGTCCAAGCTGCGATTTCTGAGAACCAGAGGAAGCTCGAGCAACTCCAAGGATTCATAACTGATAACGATAATATGATCAAGCTCGTCCAGAAATTACCTGAAGAGCTTCACCATGAAGTTATGGTACTTTTGCTGTTTCCTTTGTGTTGGGCGTTTGTTGTGATGGAAAAAGAAAATTATGTTTGATTGAGATACTGGGGATCTTTTGGTGAATTTATTTGTGGGTTCGATGTGATTGTTGTTTTGAAGGTTCCATTTGGGAAGGCAGCGTTTTTCCCCGGGCGTTTGATTCATACGAACGAGTTTCTGGTAATGTATTGTATATTTGTACTATTTATAAGTAACTTCTTACGAACTTATCCTCTTATTGGTTGATAAGAAGGGGACAAGGATATTATGCGCCTATGAATTCATTAAGTAGATGTTCCTGTTGGTTTTCAAGTAGTAAAAGCTTTTTTTGTGGAGCACATGGGACTTGGTCCTAACGGTCTTCTTCTCTTCTGTTCATTAGCCTAACGATCTTTACTCTCTACGTACGTTGTTAGAGTCCCTTGTAGAACTTTTTAACTTTAAGGGAAAAAGAGCAAATTACTGGGTTAAGGCGATCACTGTTTATATTTTGATTACTAAATTGGAAATGTTTGTGGCCGAGTTCTGGACAGAATATGTGGAAAGGTTTTCTTTTCAAGACATCAAGTTGAGTACCAGACTTAAATCCAAGTGCAGGTTCTTCTCGGGGAAGGTTATTATGCTGAGAGAACATCCAAACAAACAGTGGAGATTTTGAAAAGGAGAGGTAAGGCTTTGGATTCTCAAGTTGATTCTCTGAAGGCCACGATGGATAATCTTAAAGCCGAGGCCTCATTTTTTGATGCTACAGCTTCTGAGGCTGAGGTACGTTTAGCAATCAATTGGTTAGCCATACCATAATGTGAAGTTAGTAAAAGATTTATTGTTTTTATCTTTAGCACTGAAATTTTAATTTCTTGTTCAAAGCCTTGGATATTATTTGTAAGGTAGAAGTATTTTCTCCCTTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAAAGGTTGAATAGTTTAGAGCGGATAAGAATTATGAATTTATGAGCTATACTTGGGAATCACGTTTGCAGTTAAGTTTCTTGTATGATAGGATTAAATTTTATTTCTCTTTTAAAATGACTAGAATATAGTGGTTGATGTTCTGAGAGAAACGAAGAAAAGGAGAACGAACAATCTTGGATGTTAAAAATAGATGAACAGCGTGAAACTAATATTTAAGGATCTCTGCTCAACAAGTTTGATAATTTGCATGGATGCAATTGAATGGAAACTACTATTATGGTTTCTCTTTCTTATTCAACAAATACTTGTTTTTAAAGTCCTGCACGACATTATTGACATGTGAAAAAAAAATTATAATAAAGTAACTCTAATTGGCTTGAATTAAAACTAGAAAAAAGAGTCATTACAAAGGTATCTTGGCCTTGAGCTTTACCTAGAAGCCAGTACGTGTACTTTTGCTATTTGGAATAAATTCTCATACAATTTTCGTTTTGATGTTCATTTTATATTTCTATCAGGAGGGTCTAGTCGAGATAAAGGAGGAATATGTGGAAGAAAACTTTTGCGAGCAGGAATTGACATCAGGTCGGTTCTTATACCTTTCCCTCCTTTTGCTGCTGTATTATGTTTTGGTTGAGACTTCAATGGTAAAGAGCTTAAGACTTCCTGGTGATAGAGTTTTCCTTCCAGTTAATCTTGGGTTGAATGTGTGAGTTAAGCTGAAATTTGACTTTGTTCCAATTTGACTTTCTTCATCTCCATCCTATTATTTATGAATTATCTCAGGATTGACAAATTGGCATTGTAAGACACGTGAGGCCTTGTGTACCGCATTGCACAAATGAATAATTGTATGGCACATTTGAATAATTGTATGGCACATATGAATAATTGTACTTAGCTTTTGCTGTTGTCACCTCCTTTGTGTGCACACCATAATTGCGTTTGAATATTTATAAGAACTACTTGTAAGTACAGGTAAAACCAGTGAATTACAATGATGTTAATATTTCTTTTCAGAAGTGAACAAGCAAGATGTTACTAGAGTTTCTGGAGTTGACGAGGCAAAGATTGCAGAAATCGATGCAGAATATGCCCGTATGATGGCCAGATTCGACGAACTTGAGAAGGAAGAAGAACTTGCTGCCGCAAATGGCAACAAAAGTGATGATGAGGATGAGGAAGAGAAAGAAACTCCAAATCAATCTTTAGAGAAGTTTTATGATGATAAGCAGAGCTATTCAGAGGTAGTGTCAGCATTAAATGCCTTAGAGATTTGAAACTCATTGAAAAACATTGTCATCAACAAACTTACTGTATCATTAACCATTTCTGATGATTGCTTTCTTTGAAACATTTTCAGGGAAGTACATCTGCGTGGCTGAGGGATGAAAATGTAAGCAGTAAAGAGCTACTGGATAAGTATCAGAAACAACAAGAGGCTTCTACCAATCCATCAAATGTGACCAACATCTTATTTGATCATTTTTTGCTTTGCCGTTTATTATTAATTTACTGTGTATTTTGGTTATTTAGTGAATACGATTGATTTGTTAAAACAGCATTCAGTCCTAAAATATGTTCATTTTGTTATGCAGTGTTCAGGGCTGTCGGTACAATCGTCACCCAAAGGTTAGTCTTATCCTCTTTTTTTCCCTTCACTTGTCCAGTAACAAATGTAATTTGACATGTATTTGTCCAGATGATAAACTTATCTTATCCTTTCCAACTATAATTGTTAGAATGATTTCCCTAGTTTCCCAAAATAAAGTAAAGAATGGTTTCTCTGTCAACTTTTCAGAGGATGTAACAAGTGGCAACAGTTCTTTGACTCAGTCTCAGCGAGTGAGAAACCCTAATCCTGCTGCAAAGTCTGTAAAGTTTGCTGAAGTAAAAGAAAAGACTCAAACATTGCCTCCATCTACCAGTCAGGTACTTCAAAACTTTTTTATCATATCGAACTTGTAGGTTAAGAAGCACAAACACTTCAGTTTGAATAGCGTGTCTGTGTTTGACATGTGTCGGACATTTGAACACTTTAACACTTGGTGGACACCTATTGGATGCTTGCTAGTGCAACAAATGTATTAGACATGCATAGAACACAAGTAGACTAAAAAGACACATATGTCGGACATTTGAACACTTTAACACTTGGTGGACACCTATTGGACGCTTGCTAGTGCAACAAATGTATTAGACATGCATAGAACACAAGTAGACTAAAAAGACACATATATGACAATGATAATAACTTTTGAGCATGGAATATATCAAACTAAGTCTTTTAAGCATATAAATGCATCAATTCATTTACAATGAATTTTCTTTTACTACAAAAATGATATGTATATTTTAAAAATGAGTATTTTAATAAATGTGTCCTTGCCGTCTTGTGTCCTAGATTTTTAAAATATGGTGTGTCGCCGTGTCCATGTCGTGTCGTATTCATGTCTCGTATCCGTGTCTGTGCTTCTTAGCTTTTAGGTGTCCTGTTGGTCTTAAAATATGGATTTTCCCTTTAATTTTGAGACCGGTAATAGTTATTAGGTAACTTCAAGGCTAGTTATAATTTTCAGCTTCATTAATCTATTTTGTGCCCTTCCACTCGGGTGTAGGCTTTCACAGGATCCATAATTGAGCGTCCTCCTATCATACCAAAAACTTCTAAACAAGAAACAGAAACTCCATTGCAGGTGAGTTTGCTTAGTTTACACCATTTTTATTGCCATCATTTTATTTGTAATCATTGATGCAAAAGCTAATCACTTCTGATTTGACAGCCTTCTGGTTCTCAACCTTCCAAACCAGTATCCAGATTCAAGATGCAAAGAAGATAGTGAACTGTCACTATAATATCATACTTGAAAATGTATCTTAAAGTTTTGTCAGCGATTGATTTTGTTTGCTAGTTCAGATAAAATTTTGTCTCGTTCTTTATGCCTTGATCCAGTTCTCCAACAGTATTAACTAAAGGGATCAACATTGCCTTTAGATAGTAAGGGGCAGAAAAAATGACACTCTAATTAACAATACTAAATTTATGTTATGGAACAATTACGATGATTCTCTTTATAACAAAATCCTAAGTGCTACACCAGTTGTAGTTTAAAATACTATCACTTTACATTTAACTATTGCTTTTACAATGAACTTTAGTTGAAACCCACGTGGGGAGGGCAACTCAGCCATTTGGTATCTTTTCCTTTCTCCTCCTGTAGTCTTCAAGTACTTTCTGCCTTTGCATTGGGTTTGCAGATAGTAACCATTTGCTGAATTCCAACTCGCCCATTCCCACAAATTCAGCAAGAATACGATACTGGATCTTCTTACGGTCCATGGATGAAGACAAATCATCTCTCTCACTAATATCATCTAGTTTCCTTTTCTTTATCCCTGGAACGTGTGGCTGCCTGGGTGTACAATTTTGATCTACTGGCAGGGCCATTTTAACTTGTGTTTCAGGTCCAGAATTCACTATGTCTTCATTTCTATGGGCATATACAATACCTACAAAACAATTATCTTCAAATATAAAGACTTGCATGTTACTAAATGTTTAGAGCTCTTGGTTTACCCAAAAAAATTTGTTAGAGCACCTGAGAAAACAAAGTTGGGTCAAACCAGCCCACAAGTCAAGATTCTGATATCTAAACATACTGACAAAGAAATTTCTGATGTATTTACTGACAAGTAAGCCTGAAAAGGTGCTCCGACCCAGGATCATGTTAGATTATGACCAGGTTAGTTTGTGCCTAAAATAACTTTGGTGGAAAAATCTAATAACTCATGATCAGAACCAAAGATGCAGGGGAATTGGCTGACAAAAAGAGGAATTTACCCAGGTCTTCAAGCATAGGCTTATTCGTGGTAGTCTTTGCTGGATGGGTTGGCTTCTCATTGGTTTTTCCAGAAGGAACAGAAGATCCAGCGTTGGAGGTATTCTGGTCTGTGTTTGAGGCAAGCCCTTCACTTGTTTCTTTTTCCTCGTGCATCTCAATGATCTCACTAGTGAAGAGCTTATCCGACGGGTCTGAGAACAAATTGCAGATACCAAAAAGCTCACCTTGGAATTCTTTACAATCCTGAAAATTTTCCCACTAGTGTTACATGGGTGGGGAGAAGTTCTAACCATAAAACTGACTAGAAAATTTAAGTATATACACCTGAACACCTTCAAAATACCGC

mRNA sequence

ATGGAAGCAGGACGCGTAAAGGGAACAGTGACGCCGTTATCCTCCTTATTTCCGGCTCAGGATGCCCGCAAGGCTGCGTCGCGCGTCCAAGCTGCGATTTCTGAGAACCAGAGGAAGCTCGAGCAACTCCAAGGATTCATAACTGATAACGATAATATGATCAAGCTCGTCCAGAAATTACCTGAAGAGCTTCACCATGAAGTTATGGTTCCATTTGGGAAGGCAGCGTTTTTCCCCGGGCGTTTGATTCATACGAACGAGTTTCTGGTTCTTCTCGGGGAAGGTTATTATGCTGAGAGAACATCCAAACAAACAGTGGAGATTTTGAAAAGGAGAGGTAAGGCTTTGGATTCTCAAGTTGATTCTCTGAAGGCCACGATGGATAATCTTAAAGCCGAGGCCTCATTTTTTGATGCTACAGCTTCTGAGGCTGAGGAGGGTCTAGTCGAGATAAAGGAGGAATATGTGGAAGAAAACTTTTGCGAGCAGGAATTGACATCAGAAGTGAACAAGCAAGATGTTACTAGAGTTTCTGGAGTTGACGAGGCAAAGATTGCAGAAATCGATGCAGAATATGCCCGTATGATGGCCAGATTCGACGAACTTGAGAAGGAAGAAGAACTTGCTGCCGCAAATGGCAACAAAAGTGATGATGAGGATGAGGAAGAGAAAGAAACTCCAAATCAATCTTTAGAGAAGTTTTATGATGATAAGCAGAGCTATTCAGAGGGAAGTACATCTGCGTGGCTGAGGGATGAAAATGTAAGCAGTAAAGAGCTACTGGATAAGTATCAGAAACAACAAGAGGCTTCTACCAATCCATCAAATTGTTCAGGGCTGTCGGTACAATCGTCACCCAAAGAGGATGTAACAAGTGGCAACAGTTCTTTGACTCAGTCTCAGCGAGTGAGAAACCCTAATCCTGCTGCAAAGTCTGTAAAGTTTGCTGAAGTAAAAGAAAAGACTCAAACATTGCCTCCATCTACCAGTCAGGCTTTCACAGGATCCATAATTGAGCGTCCTCCTATCATACCAAAAACTTCTAAACAAGAAACAGAAACTCCATTGCAGCCTTCTGGTTCTCAACCTTCCAAACCAGTATCCAGATTCAAGATGCAAAGAAGATAGTGAACTGTCACTATAATATCATACTTGAAAATGTATCTTAAAGTTTTGTCAGCGATTGATTTTGTTTGCTAGTTCAGATAAAATTTTGTCTCGTTCTTTATGCCTTGATCCAGTTCTCCAACAGTATTAACTAAAGGGATCAACATTGCCTTTAGATAGTAAGGGGCAGAAAAAATGACACTCTAATTAACAATACTAAATTTATGTTATGGAACAATTACGATGATTCTCTTTATAACAAAATCCTAAGTGCTACACCAGTTGTAGTTTAAAATACTATCACTTTACATTTAACTATTGCTTTTACAATGAACTTTAGTTGAAACCCACGTGGGGAGGGCAACTCAGCCATTTGGTATCTTTTCCTTTCTCCTCCTGTAGTCTTCAAGTACTTTCTGCCTTTGCATTGGGTTTGCAGATAGTAACCATTTGCTGAATTCCAACTCGCCCATTCCCACAAATTCAGCAAGAATACGATACTGGATCTTCTTACGGTCCATGGATGAAGACAAATCATCTCTCTCACTAATATCATCTAGTTTCCTTTTCTTTATCCCTGGAACGTGTGGCTGCCTGGGTGTACAATTTTGATCTACTGGCAGGGCCATTTTAACTTGTGTTTCAGGTCCAGAATTCACTATGTCTTCATTTCTATGGGCATATACAATACCTACAAAACAATTATCTTCAAATATAAAGACTTGCATGTTACTAAATGTTTAGAGCTCTTGGTTTACCCAAAAAAATTTGTTAGAGCACCTGAGAAAACAAAGTTGGGTCAAACCAGCCCACAAGTCAAGATTCTGATATCTAAACATACTGACAAAGAAATTTCTGATGTATTTACTGACAAGTAAGCCTGAAAAGGTGCTCCGACCCAGGATCATGTTAGATTATGACCAGGTTAGTTTGTGCCTAAAATAACTTTGGTGGAAAAATCTAATAACTCATGATCAGAACCAAAGATGCAGGGGAATTGGCTGACAAAAAGAGGAATTTACCCAGGTCTTCAAGCATAGGCTTATTCGTGGTAGTCTTTGCTGGATGGGTTGGCTTCTCATTGGTTTTTCCAGAAGGAACAGAAGATCCAGCGTTGGAGGTATTCTGGTCTGTGTTTGAGGCAAGCCCTTCACTTGTTTCTTTTTCCTCGTGCATCTCAATGATCTCACTAGTGAAGAGCTTATCCGACGGGTCTGAGAACAAATTGCAGATACCAAAAAGCTCACCTTGGAATTCTTTACAATCCTGAAAATTTTCCCACTAGTGTTACATGGGTGGGGAGAAGTTCTAACCATAAAACTGACTAGAAAATTTAAGTATATACACCTGAACACCTTCAAAATACCGC

Coding sequence (CDS)

ATGGAAGCAGGACGCGTAAAGGGAACAGTGACGCCGTTATCCTCCTTATTTCCGGCTCAGGATGCCCGCAAGGCTGCGTCGCGCGTCCAAGCTGCGATTTCTGAGAACCAGAGGAAGCTCGAGCAACTCCAAGGATTCATAACTGATAACGATAATATGATCAAGCTCGTCCAGAAATTACCTGAAGAGCTTCACCATGAAGTTATGGTTCCATTTGGGAAGGCAGCGTTTTTCCCCGGGCGTTTGATTCATACGAACGAGTTTCTGGTTCTTCTCGGGGAAGGTTATTATGCTGAGAGAACATCCAAACAAACAGTGGAGATTTTGAAAAGGAGAGGTAAGGCTTTGGATTCTCAAGTTGATTCTCTGAAGGCCACGATGGATAATCTTAAAGCCGAGGCCTCATTTTTTGATGCTACAGCTTCTGAGGCTGAGGAGGGTCTAGTCGAGATAAAGGAGGAATATGTGGAAGAAAACTTTTGCGAGCAGGAATTGACATCAGAAGTGAACAAGCAAGATGTTACTAGAGTTTCTGGAGTTGACGAGGCAAAGATTGCAGAAATCGATGCAGAATATGCCCGTATGATGGCCAGATTCGACGAACTTGAGAAGGAAGAAGAACTTGCTGCCGCAAATGGCAACAAAAGTGATGATGAGGATGAGGAAGAGAAAGAAACTCCAAATCAATCTTTAGAGAAGTTTTATGATGATAAGCAGAGCTATTCAGAGGGAAGTACATCTGCGTGGCTGAGGGATGAAAATGTAAGCAGTAAAGAGCTACTGGATAAGTATCAGAAACAACAAGAGGCTTCTACCAATCCATCAAATTGTTCAGGGCTGTCGGTACAATCGTCACCCAAAGAGGATGTAACAAGTGGCAACAGTTCTTTGACTCAGTCTCAGCGAGTGAGAAACCCTAATCCTGCTGCAAAGTCTGTAAAGTTTGCTGAAGTAAAAGAAAAGACTCAAACATTGCCTCCATCTACCAGTCAGGCTTTCACAGGATCCATAATTGAGCGTCCTCCTATCATACCAAAAACTTCTAAACAAGAAACAGAAACTCCATTGCAGCCTTCTGGTTCTCAACCTTCCAAACCAGTATCCAGATTCAAGATGCAAAGAAGATAG

Protein sequence

MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQRKLEQLQGFITDNDNMIKLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSEVNKQDVTRVSGVDEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQSQRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR

Homology

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BLAST of Pay0018479 vs. ExPASy Swiss-Prot
Match: Q54HG4 (RNA polymerase II subunit 5-mediating protein homolog OS=Dictyostelium discoideum OX=44689 GN=rmp PE=3 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 6.7e-18
Identity = 78/266 (29.32%), Postives = 133/266 (50.00%), Query Frame = 0


Query: 28  RVQAAISENQRKLEQLQGFITDNDNMIKLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNE 87
           + +  + E Q  +E+L+    D   +I  +Q LP+ L  ++MVP GK AFF G L +TNE
Sbjct: 9   KYEQKVVEYQDHIEELKSTKNDYKQLIDTLQHLPDTLQPKIMVPMGKLAFFEGNLKNTNE 68

Query: 88  FLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKATMDNLKAEAS----FFDATASE 147
            L+LLG+ Y+A+R+SKQT++I++RR K +D+ ++ L+  +  LK   S       A   +
Sbjct: 69  ILILLGDNYFAKRSSKQTIDIIQRRDKDIDTSINDLREQIKGLKQRVSMTTDLSKALHEK 128

Query: 148 AEEGLVEIKEEYVEENFCEQELTSEVNKQDVTRVSGV------------DEAKIAEIDAE 207
             + +VEIKEEY  +   E+E   +   Q  T  +              ++ K  E+D E
Sbjct: 129 EYDNIVEIKEEYNSDEEREKEKKRKQKPQKSTTTTTTTTTSKDKPKTEEEKKKSKEMDEE 188

Query: 208 YARMMARFDELEKEEELAAANGNKSDDEDEEE-KETPNQSLEKFYDDKQSYSEGSTSAWL 267
           + +M+ R   LE++E          DD DEEE  +  N+ L+    D++   +   +   
Sbjct: 189 FDKMLKRLSILEEKE------NKMGDDYDEEEFNKKFNKKLDITGSDEEYDDDNYNNNND 248

Query: 268 RDENVSSKELLDKYQKQQEASTNPSN 277
            D++    +  + YQ++      P N
Sbjct: 249 DDDDNDEDDDREYYQEEGFEDEKPEN 268

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BLAST of Pay0018479 vs. ExPASy Swiss-Prot
Match: O94763 (Unconventional prefoldin RPB5 interactor 1 OS=Homo sapiens OX=9606 GN=URI1 PE=1 SV=3)

HSP 1 Score: 79.7 bits (195), Expect = 7.7e-14
Identity = 66/250 (26.40%), Postives = 125/250 (50.00%), Query Frame = 0


Query: 12  PLSSLFP--AQDARKAASRVQAAISENQRKLEQLQGFITDNDNMIKLVQKLPEELHHEVM 71
           P  +L P  A D  +     +  ++  Q +++  +    D + + + +  LP++L + +M
Sbjct: 18  PAPALVPLRAPDVARLREEQEKVVTNCQERIQHWKKVDNDYNALRERLSTLPDKLSYNIM 77

Query: 72  VPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKATMDN 131
           VPFG  AF PG+L+HTNE  VLLG+ ++A+ ++KQ V +++ R + +   +D LK  M N
Sbjct: 78  VPFGPFAFMPGKLVHTNEVTVLLGDNWFAKCSAKQAVGLVEHRKEHVRKTIDDLKKVMKN 137

Query: 132 LKAEASFFD--ATASEAEEGLVEIKE------EYVEENFCEQELTSEVNKQDVTRVSGVD 191
            ++   F +     S+A   +V+I+E      E+  ++    +  S+    D+      +
Sbjct: 138 FESRVEFTEDLQKMSDAAGDIVDIREEIKCDFEFKAKHRIAHKPHSKPKTSDIFEADIAN 197

Query: 192 EAKIAEIDAEYARMMARFDELEKEEELAAANGNKSD---------DEDEEEKETPNQSLE 243
           + K  ++ A+   + AR +ELE++EEL     +K D            EEEKE  N ++ 
Sbjct: 198 DVKSKDLLAD-KELWARLEELERQEELLGELDSKPDTVIANGEDTTSSEEEKEDRNTNVN 257

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BLAST of Pay0018479 vs. ExPASy Swiss-Prot
Match: Q3B7M7 (Unconventional prefoldin RPB5 interactor OS=Bos taurus OX=9913 GN=URI1 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 8.5e-13
Identity = 60/233 (25.75%), Postives = 117/233 (50.21%), Query Frame = 0


Query: 19  AQDARKAASRVQAAISENQRKLEQLQGFITDNDNMIKLVQKLPEELHHEVMVPFGKAAFF 78
           A +  +     +  ++  Q K++  +    D + + + +  LP++L + +MVPFG  AF 
Sbjct: 19  APEVARLREEQEKVVTNCQEKIQHWKKVDNDYNALQERLSTLPDKLSYNIMVPFGPFAFM 78

Query: 79  PGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFD 138
           PG+L+HTNE  VLLG+ ++A+ ++KQ V +++ R + +   +D LK  M N ++   F +
Sbjct: 79  PGKLVHTNEVTVLLGDNWFAKCSAKQAVGLVEHRKEHVRKTIDDLKKVMKNFESRVEFTE 138

Query: 139 --ATASEAEEGLVEIKE------EYVEENFCEQELTSEVNKQDVTRVSGVDEAKIAEIDA 198
                S+A   +V+I+E      E+  ++    +  S+    D+      ++ K  ++ A
Sbjct: 139 DLQKMSDAAGDIVDIREEIKTDFEFKAKHRIAHKPHSKPKTSDIFEAEFANDLKSKDLLA 198

Query: 199 EYARMMARFDELEKEEEL------------AAANGNKSDDEDEEEKETPNQSL 232
           +   +  R +ELE++EEL              ANG     E+E+E +  N ++
Sbjct: 199 D-KELWDRLEELERQEELLGEIDIDSKPDTVIANGEDVSSEEEKEDQNINVNM 250

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BLAST of Pay0018479 vs. ExPASy Swiss-Prot
Match: Q3TLD5 (Unconventional prefoldin RPB5 interactor OS=Mus musculus OX=10090 GN=Uri1 PE=1 SV=2)

HSP 1 Score: 73.2 bits (178), Expect = 7.2e-12
Identity = 61/225 (27.11%), Postives = 109/225 (48.44%), Query Frame = 0


Query: 19  AQDARKAASRVQAAISENQRKLEQLQGFITDNDNMIKLVQKLPEELHHEVMVPFGKAAFF 78
           A +  +     +  ++  Q K++  +    D   + + ++ LP++L ++VMVPFG  AF 
Sbjct: 25  APEVARLREEQEKVVTNCQEKIQHWEKVDNDYSALQERLRTLPDKLSYDVMVPFGPLAFM 84

Query: 79  PGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKATMDNLKAEASFFD 138
           PG+L+HTNE  VLLG+ ++A+ ++KQ V +++ R + +   +D  K  + N ++   F +
Sbjct: 85  PGKLVHTNEVTVLLGDNWFAKCSAKQAVGLVEHRKEHVRKTIDDFKKVLKNFESRVEFTE 144

Query: 139 --ATASEAEEGLVEIKEEYVEENFCEQELTSEVNKQDVTRVSGVDEAKIAE-------ID 198
                S+A    V+I+EE   +   + +           + S + EA            D
Sbjct: 145 DLQKMSDAAGDFVDIREEIKSDFEFKGKQRIAHKPHSKPKTSDIFEADFENGVKPKNTFD 204

Query: 199 AEYARMMARFDELEKEEELAAANGNKSDD---------EDEEEKE 226
           A+   + AR +ELE++EEL     +K D            EEEKE
Sbjct: 205 AD--ELWARLEELERQEELLGELESKPDTVIANGEDRVSSEEEKE 247

[Close]

BLAST of Pay0018479 vs. ExPASy Swiss-Prot
Match: Q9W148 (Unconventional prefoldin RPB5 interactor-like protein OS=Drosophila melanogaster OX=7227 GN=uri PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 8.5e-05
Identity = 75/293 (25.60%), Postives = 128/293 (43.69%), Query Frame = 0


Query: 32  AISENQRKLEQLQGFITDNDNMIKLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVL 91
           A+  N  + E+ + F  DN++ I+ + K  + L  EVMVP G+ A  PG LIHTNE LV 
Sbjct: 11  ALQTNASETERWEAFKRDNESTIRNLDKFAKNLSVEVMVPIGRKALMPGELIHTNELLVG 70

Query: 92  LGEGYYAERTSKQTVEILKRRGKALDSQVDSLKATMD--NLKAEASFFDATASEAEEGLV 151
             EGY++  +S +  EI + R K  + Q+  L    D    K    F +      ++  V
Sbjct: 71  HYEGYFSACSSHKAKEICQYRLKLAEEQLKKLAVENDLWQKKLHTPFAEGAVPSGDQ--V 130

Query: 152 EIKEEYVEENFCE------QELTSEVNKQDVTRVSGVDEAKIAEIDAEYARMMARFDELE 211
           EI E++ EE+  +      + +  +  K+ + R     EA+  + D E  R   + +E E
Sbjct: 131 EIVEDFNEESHNKWLAEHRKRMRQQKQKERLER-----EAEPVKKDNEVLR---KLEERE 190

Query: 212 KEEELAAANGNKSDDE-----DEEEKETPNQSLEKFYDDKQSYSEGSTSAWLRDENVSSK 271
             EEL     N  +D+     ++E  ++ N+S       K    E     W + E     
Sbjct: 191 MMEELGLDPDNIDEDQLHDMLNQEPLKSTNES-----SPKSLTQEEEDELWKKLEAEEQN 250

Query: 272 ELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQSQRVRNPNPAAK 312
           E  D+   + E S   ++     + S   E  +S   +   ++ V   +P ++
Sbjct: 251 E-ADELSSEAEESLKTTDNLVRQLMSGETETPSSKKRTAGTNRNVEIQDPISE 287

[Close]

BLAST of Pay0018479 vs. ExPASy TrEMBL
Match: A0A5A7V404 (RNA polymerase II subunit 5-mediating protein-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G003700 PE=4 SV=1)

HSP 1 Score: 693.7 bits (1789), Expect = 4.1e-196
Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0


Query: 1   MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQRKLEQLQGFITDNDNMIKLVQKL 60
           MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQRKLEQLQGFITDNDNMIKLVQKL
Sbjct: 1   MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQRKLEQLQGFITDNDNMIKLVQKL 60

Query: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQV 120
           PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQV
Sbjct: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQV 120

Query: 121 DSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSEVNKQDVTRVSGV 180
           DSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSEVNKQDVTRVSGV
Sbjct: 121 DSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSEVNKQDVTRVSGV 180

Query: 181 DEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQS 240
           DEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQS
Sbjct: 181 DEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQS 240

Query: 241 YSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS 300
           YSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS
Sbjct: 241 YSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS 300

Query: 301 QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSG 360
           QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSG
Sbjct: 301 QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSG 360

Query: 361 SQPSKPVSRFKMQRR 376
           SQPSKPVSRFKMQRR
Sbjct: 361 SQPSKPVSRFKMQRR 375

[Close]

BLAST of Pay0018479 vs. ExPASy TrEMBL
Match: A0A5D3BZL3 (RNA polymerase II subunit 5-mediating protein-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G002120 PE=4 SV=1)

HSP 1 Score: 688.3 bits (1775), Expect = 1.7e-194
Identity = 372/375 (99.20%), Postives = 374/375 (99.73%), Query Frame = 0


Query: 1   MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQRKLEQLQGFITDNDNMIKLVQKL 60
           MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQ+KLEQLQGFITDN+NMIKLVQKL
Sbjct: 74  MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKL 133

Query: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQV 120
           PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQV
Sbjct: 134 PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQV 193

Query: 121 DSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSEVNKQDVTRVSGV 180
           DSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTS VNKQDVTRVSGV
Sbjct: 194 DSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGV 253

Query: 181 DEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQS 240
           DEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQS
Sbjct: 254 DEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQS 313

Query: 241 YSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS 300
           YSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS
Sbjct: 314 YSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS 373

Query: 301 QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSG 360
           QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSG
Sbjct: 374 QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSG 433

Query: 361 SQPSKPVSRFKMQRR 376
           SQPSKPVSRFKMQRR
Sbjct: 434 SQPSKPVSRFKMQRR 448

[Close]

BLAST of Pay0018479 vs. ExPASy TrEMBL
Match: A0A1S4DX32 (RNA polymerase II subunit 5-mediating protein homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490540 PE=4 SV=1)

HSP 1 Score: 688.3 bits (1775), Expect = 1.7e-194
Identity = 372/375 (99.20%), Postives = 374/375 (99.73%), Query Frame = 0


Query: 1   MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQRKLEQLQGFITDNDNMIKLVQKL 60
           MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQ+KLEQLQGFITDN+NMIKLVQKL
Sbjct: 1   MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKL 60

Query: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQV 120
           PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQV
Sbjct: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQV 120

Query: 121 DSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSEVNKQDVTRVSGV 180
           DSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTS VNKQDVTRVSGV
Sbjct: 121 DSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGV 180

Query: 181 DEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQS 240
           DEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQS
Sbjct: 181 DEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQS 240

Query: 241 YSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS 300
           YSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS
Sbjct: 241 YSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS 300

Query: 301 QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSG 360
           QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSG
Sbjct: 301 QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSG 360

Query: 361 SQPSKPVSRFKMQRR 376
           SQPSKPVSRFKMQRR
Sbjct: 361 SQPSKPVSRFKMQRR 375

[Close]

BLAST of Pay0018479 vs. ExPASy TrEMBL
Match: A0A1S3BK98 (RNA polymerase II subunit 5-mediating protein homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490540 PE=4 SV=1)

HSP 1 Score: 684.9 bits (1766), Expect = 1.9e-193
Identity = 372/375 (99.20%), Postives = 374/375 (99.73%), Query Frame = 0


Query: 1   MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQRKLEQLQGFITDNDNMIKLVQKL 60
           MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQ+KLEQLQGFITDN+NMIKLVQKL
Sbjct: 1   MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKL 60

Query: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQV 120
           PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQV
Sbjct: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQV 120

Query: 121 DSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSEVNKQDVTRVSGV 180
           DSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTS VNKQDVTRVSGV
Sbjct: 121 DSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTS-VNKQDVTRVSGV 180

Query: 181 DEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQS 240
           DEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQS
Sbjct: 181 DEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQS 240

Query: 241 YSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS 300
           YSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS
Sbjct: 241 YSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS 300

Query: 301 QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSG 360
           QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSG
Sbjct: 301 QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSG 360

Query: 361 SQPSKPVSRFKMQRR 376
           SQPSKPVSRFKMQRR
Sbjct: 361 SQPSKPVSRFKMQRR 374

[Close]

BLAST of Pay0018479 vs. ExPASy TrEMBL
Match: A0A0A0KB27 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G127400 PE=4 SV=1)

HSP 1 Score: 627.9 bits (1618), Expect = 2.8e-176
Identity = 342/375 (91.20%), Postives = 356/375 (94.93%), Query Frame = 0


Query: 1   MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQRKLEQLQGFITDNDNMIKLVQKL 60
           ME+GRVKGTVT L+SLFPAQDARKAASRVQ AISE QR+LEQL+GFITDNDN+IKLVQKL
Sbjct: 82  MESGRVKGTVTSLASLFPAQDARKAASRVQDAISEKQRELEQLRGFITDNDNLIKLVQKL 141

Query: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQV 120
           PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQT EILKRRGKALDSQV
Sbjct: 142 PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTAEILKRRGKALDSQV 201

Query: 121 DSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSEVNKQDVTRVSGV 180
           DSLKA MDNLKAEASFFDATASEAE+GLVEIKEEYVEENFCEQE TS VNKQDV  VSGV
Sbjct: 202 DSLKAMMDNLKAEASFFDATASEAEDGLVEIKEEYVEENFCEQESTSGVNKQDVPSVSGV 261

Query: 181 DEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQS 240
           D+AKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEK T NQSLE+FY DKQS
Sbjct: 262 DKAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKGTQNQSLERFYGDKQS 321

Query: 241 YSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS 300
            S+GSTS W RDENVSSKELL+KYQKQQEASTNPSNCSGLSVQ+SPKEDVTSGN+SLT+S
Sbjct: 322 LSKGSTSTWPRDENVSSKELLNKYQKQQEASTNPSNCSGLSVQTSPKEDVTSGNNSLTES 381

Query: 301 QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSG 360
           QRV NPNPAAKSV FAEVKEK QTLPPST+QAFTGSIIERPPIIPKTSKQETET LQPSG
Sbjct: 382 QRVINPNPAAKSVTFAEVKEKNQTLPPSTNQAFTGSIIERPPIIPKTSKQETETTLQPSG 441

Query: 361 SQPSKPVSRFKMQRR 376
           SQPSKPVSRFKMQRR
Sbjct: 442 SQPSKPVSRFKMQRR 456

[Close]

BLAST of Pay0018479 vs. NCBI nr
Match: KAA0062034.1 (RNA polymerase II subunit 5-mediating protein-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 693.7 bits (1789), Expect = 8.6e-196
Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0


Query: 1   MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQRKLEQLQGFITDNDNMIKLVQKL 60
           MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQRKLEQLQGFITDNDNMIKLVQKL
Sbjct: 1   MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQRKLEQLQGFITDNDNMIKLVQKL 60

Query: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQV 120
           PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQV
Sbjct: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQV 120

Query: 121 DSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSEVNKQDVTRVSGV 180
           DSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSEVNKQDVTRVSGV
Sbjct: 121 DSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSEVNKQDVTRVSGV 180

Query: 181 DEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQS 240
           DEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQS
Sbjct: 181 DEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQS 240

Query: 241 YSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS 300
           YSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS
Sbjct: 241 YSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS 300

Query: 301 QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSG 360
           QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSG
Sbjct: 301 QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSG 360

Query: 361 SQPSKPVSRFKMQRR 376
           SQPSKPVSRFKMQRR
Sbjct: 361 SQPSKPVSRFKMQRR 375

[Close]

BLAST of Pay0018479 vs. NCBI nr
Match: XP_016900539.1 (PREDICTED: RNA polymerase II subunit 5-mediating protein homolog isoform X1 [Cucumis melo])

HSP 1 Score: 688.3 bits (1775), Expect = 3.6e-194
Identity = 372/375 (99.20%), Postives = 374/375 (99.73%), Query Frame = 0


Query: 1   MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQRKLEQLQGFITDNDNMIKLVQKL 60
           MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQ+KLEQLQGFITDN+NMIKLVQKL
Sbjct: 1   MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKL 60

Query: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQV 120
           PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQV
Sbjct: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQV 120

Query: 121 DSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSEVNKQDVTRVSGV 180
           DSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTS VNKQDVTRVSGV
Sbjct: 121 DSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGV 180

Query: 181 DEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQS 240
           DEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQS
Sbjct: 181 DEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQS 240

Query: 241 YSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS 300
           YSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS
Sbjct: 241 YSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS 300

Query: 301 QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSG 360
           QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSG
Sbjct: 301 QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSG 360

Query: 361 SQPSKPVSRFKMQRR 376
           SQPSKPVSRFKMQRR
Sbjct: 361 SQPSKPVSRFKMQRR 375

[Close]

BLAST of Pay0018479 vs. NCBI nr
Match: TYK04987.1 (RNA polymerase II subunit 5-mediating protein-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 688.3 bits (1775), Expect = 3.6e-194
Identity = 372/375 (99.20%), Postives = 374/375 (99.73%), Query Frame = 0


Query: 1   MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQRKLEQLQGFITDNDNMIKLVQKL 60
           MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQ+KLEQLQGFITDN+NMIKLVQKL
Sbjct: 74  MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKL 133

Query: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQV 120
           PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQV
Sbjct: 134 PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQV 193

Query: 121 DSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSEVNKQDVTRVSGV 180
           DSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTS VNKQDVTRVSGV
Sbjct: 194 DSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGV 253

Query: 181 DEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQS 240
           DEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQS
Sbjct: 254 DEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQS 313

Query: 241 YSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS 300
           YSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS
Sbjct: 314 YSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS 373

Query: 301 QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSG 360
           QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSG
Sbjct: 374 QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSG 433

Query: 361 SQPSKPVSRFKMQRR 376
           SQPSKPVSRFKMQRR
Sbjct: 434 SQPSKPVSRFKMQRR 448

[Close]

BLAST of Pay0018479 vs. NCBI nr
Match: XP_008448308.1 (PREDICTED: RNA polymerase II subunit 5-mediating protein homolog isoform X2 [Cucumis melo])

HSP 1 Score: 684.9 bits (1766), Expect = 4.0e-193
Identity = 372/375 (99.20%), Postives = 374/375 (99.73%), Query Frame = 0


Query: 1   MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQRKLEQLQGFITDNDNMIKLVQKL 60
           MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQ+KLEQLQGFITDN+NMIKLVQKL
Sbjct: 1   MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKL 60

Query: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQV 120
           PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQV
Sbjct: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQV 120

Query: 121 DSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSEVNKQDVTRVSGV 180
           DSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTS VNKQDVTRVSGV
Sbjct: 121 DSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTS-VNKQDVTRVSGV 180

Query: 181 DEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQS 240
           DEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQS
Sbjct: 181 DEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQS 240

Query: 241 YSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS 300
           YSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS
Sbjct: 241 YSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS 300

Query: 301 QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSG 360
           QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSG
Sbjct: 301 QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSG 360

Query: 361 SQPSKPVSRFKMQRR 376
           SQPSKPVSRFKMQRR
Sbjct: 361 SQPSKPVSRFKMQRR 374

[Close]

BLAST of Pay0018479 vs. NCBI nr
Match: XP_004139947.1 (RNA polymerase II subunit 5-mediating protein homolog isoform X2 [Cucumis sativus] >KAE8646850.1 hypothetical protein Csa_021051 [Cucumis sativus])

HSP 1 Score: 627.9 bits (1618), Expect = 5.8e-176
Identity = 342/375 (91.20%), Postives = 356/375 (94.93%), Query Frame = 0


Query: 1   MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQRKLEQLQGFITDNDNMIKLVQKL 60
           ME+GRVKGTVT L+SLFPAQDARKAASRVQ AISE QR+LEQL+GFITDNDN+IKLVQKL
Sbjct: 1   MESGRVKGTVTSLASLFPAQDARKAASRVQDAISEKQRELEQLRGFITDNDNLIKLVQKL 60

Query: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQV 120
           PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQT EILKRRGKALDSQV
Sbjct: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTAEILKRRGKALDSQV 120

Query: 121 DSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSEVNKQDVTRVSGV 180
           DSLKA MDNLKAEASFFDATASEAE+GLVEIKEEYVEENFCEQE TS VNKQDV  VSGV
Sbjct: 121 DSLKAMMDNLKAEASFFDATASEAEDGLVEIKEEYVEENFCEQESTSGVNKQDVPSVSGV 180

Query: 181 DEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQS 240
           D+AKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEK T NQSLE+FY DKQS
Sbjct: 181 DKAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKGTQNQSLERFYGDKQS 240

Query: 241 YSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS 300
            S+GSTS W RDENVSSKELL+KYQKQQEASTNPSNCSGLSVQ+SPKEDVTSGN+SLT+S
Sbjct: 241 LSKGSTSTWPRDENVSSKELLNKYQKQQEASTNPSNCSGLSVQTSPKEDVTSGNNSLTES 300

Query: 301 QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSG 360
           QRV NPNPAAKSV FAEVKEK QTLPPST+QAFTGSIIERPPIIPKTSKQETET LQPSG
Sbjct: 301 QRVINPNPAAKSVTFAEVKEKNQTLPPSTNQAFTGSIIERPPIIPKTSKQETETTLQPSG 360

Query: 361 SQPSKPVSRFKMQRR 376
           SQPSKPVSRFKMQRR
Sbjct: 361 SQPSKPVSRFKMQRR 375

[Close]

BLAST of Pay0018479 vs. TAIR 10
Match: AT1G03760.1 (Prefoldin chaperone subunit family protein )

HSP 1 Score: 213.8 bits (543), Expect = 2.4e-55
Identity = 164/410 (40.00%), Postives = 221/410 (53.90%), Query Frame = 0


Query: 7   KGTVTPLSSLFPAQDARKAASRVQAAISENQRKLEQLQGFITDNDNMIKLVQKLPEELHH 66
           KGTVTPL   F  +D RKAAS ++  I E + ++ +LQ ++ +NDN+I LV+KLP++LHH
Sbjct: 6   KGTVTPLG--FSEEDVRKAASYMEEKIGEKRVEMNRLQQYVDENDNLINLVKKLPDQLHH 65

Query: 67  EVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAT 126
            VMVPFGK AFFPGRLIHTNE LVLLGE YY +R+SKQTV+ LKRR K L SQ+ SLKA 
Sbjct: 66  NVMVPFGKMAFFPGRLIHTNECLVLLGENYYTDRSSKQTVDFLKRRDKTLQSQIHSLKAE 125

Query: 127 MDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSEVNKQDVTRVSGVDEAKIA 186
           +++L+ EASFF  TASE  +GLVEI+EEYVEE+     +     K+      G  E    
Sbjct: 126 IEDLQTEASFFTTTASEVADGLVEIREEYVEEDSSAPVVIHSSEKEPCNLSEGETEEGEL 185

Query: 187 EIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGST 246
           E D ++AR+MAR +ELE EEEL   +G    D   E+ ++  +S+E+   D    S G T
Sbjct: 186 E-DDDFARIMARLNELEIEEELEGEDG----DSRGEDPDSSVESVEQIQHDLVKGSRGET 245

Query: 247 SAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQ------- 306
                +           Y KQ+   + P+  SG S  SSP+       + + Q       
Sbjct: 246 DRGRVE-----------YGKQETTISVPNKASGHS--SSPRVSEPRVEAKIIQVLPETHP 305

Query: 307 ----------------------SQRVRNPNPAAKSVKFAEVKEKTQTLPP---------- 366
                                   R   P   A++ K      KT  L P          
Sbjct: 306 HKDLDDPLNRIRPMAQYLSKEGQSRGGTPQQNAETWKDFRTNAKTNVLGPQKIEPQKPEP 365

Query: 367 --STSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR 376
              +++AFTGSI+E   I+  ++  +T    Q S SQPSKPVSRF+ +RR
Sbjct: 366 EFDSTKAFTGSIVEHAHILETSAHSQT----QSSTSQPSKPVSRFRAKRR 391

The following BLAST results are available for this feature:

BLAST of Pay0018479 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54HG4	6.7e-18	29.32	RNA polymerase II subunit 5-mediating protein homolog OS=Dictyostelium discoideu...	[more]
O94763	7.7e-14	26.40	Unconventional prefoldin RPB5 interactor 1 OS=Homo sapiens OX=9606 GN=URI1 PE=1 ...	[more]
Q3B7M7	8.5e-13	25.75	Unconventional prefoldin RPB5 interactor OS=Bos taurus OX=9913 GN=URI1 PE=2 SV=1	[more]
Q3TLD5	7.2e-12	27.11	Unconventional prefoldin RPB5 interactor OS=Mus musculus OX=10090 GN=Uri1 PE=1 S...	[more]
Q9W148	8.5e-05	25.60	Unconventional prefoldin RPB5 interactor-like protein OS=Drosophila melanogaster...	[more]

BLAST of Pay0018479 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V404	4.1e-196	100.00	RNA polymerase II subunit 5-mediating protein-like protein isoform X1 OS=Cucumis...	[more]
A0A5D3BZL3	1.7e-194	99.20	RNA polymerase II subunit 5-mediating protein-like protein isoform X1 OS=Cucumis...	[more]
A0A1S4DX32	1.7e-194	99.20	RNA polymerase II subunit 5-mediating protein homolog isoform X1 OS=Cucumis melo...	[more]
A0A1S3BK98	1.9e-193	99.20	RNA polymerase II subunit 5-mediating protein homolog isoform X2 OS=Cucumis melo...	[more]
A0A0A0KB27	2.8e-176	91.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G127400 PE=4 SV=1	[more]

BLAST of Pay0018479 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062034.1	8.6e-196	100.00	RNA polymerase II subunit 5-mediating protein-like protein isoform X1 [Cucumis m...	[more]
XP_016900539.1	3.6e-194	99.20	PREDICTED: RNA polymerase II subunit 5-mediating protein homolog isoform X1 [Cuc...	[more]
TYK04987.1	3.6e-194	99.20	RNA polymerase II subunit 5-mediating protein-like protein isoform X1 [Cucumis m...	[more]
XP_008448308.1	4.0e-193	99.20	PREDICTED: RNA polymerase II subunit 5-mediating protein homolog isoform X2 [Cuc...	[more]
XP_004139947.1	5.8e-176	91.20	RNA polymerase II subunit 5-mediating protein homolog isoform X2 [Cucumis sativu...	[more]

BLAST of Pay0018479 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03760.1	2.4e-55	40.00	Prefoldin chaperone subunit family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 185..205
None	No IPR available	COILS	Coil	Coil	coord: 113..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 263..375
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 266..307
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 322..336
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 347..368
None	No IPR available	PANTHER	PTHR15111	RNA POLYMERASE II SUBUNIT 5-MEDIATING PROTEIN NNX3	coord: 1..375
None	No IPR available	CDD	cd00584	Prefoldin_alpha	coord: 20..143 e-value: 2.2455E-21 score: 86.8999
None	No IPR available	SUPERFAMILY	46579	Prefoldin	coord: 23..137
IPR004127	Prefoldin alpha-like	TIGRFAM	TIGR00293	TIGR00293	coord: 24..141 e-value: 5.3E-17 score: 60.1
IPR004127	Prefoldin alpha-like	PFAM	PF02996	Prefoldin	coord: 30..143 e-value: 5.7E-25 score: 87.6
IPR009053	Prefoldin	GENE3D	1.10.287.370		coord: 20..149 e-value: 1.2E-24 score: 88.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0018479.1	Pay0018479.1	mRNA