Pay0018469 (gene) Melon (Payzawat) v1

Overview


Name	Pay0018469
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	tRNA pseudouridine synthase
Location	chr02: 21139491 .. 21148806 (-)
RNA-Seq Expression	Pay0018469
Synteny	Pay0018469

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCTCGTCCCTGCCCGACGGCGGCTGCAACTGCAAAATACGGTCGTCCGCTCTAAGGCGGGGTGGGGCGGGCGGTGGTTATGATACCAAATCCGAGGGCTAGACTTGTATCACCGTCAAGTGCCGGTTTTGGTTTGAAGATTCTGATGGAGAATCGAGCTCAACAAAAAGATTATCTTCACTATAACCACACTGACCGCTGCAGAAATGCTAGATGGACTGCCAGGTTTTTCTTTTGTATAATTTTCATTATCTGTCGCTTTATTTGATTTGAGATTTTACTCCTAGAACGAGCTTCGTACTTGGTTGTTATTGTAAATGGTAAATCAATATGAATCTGATAAGGTTGTTGTTATGTAATTGGTAGAGAAAGCTTTCAATTCATGTATGGAAGGCCGTGGCAAGAAGTGCTTGATTTTTACTCGCATGCTGTTAATGGAAGGTTGTCACTTAGCTCATTGCTTGGAACTGAGGTGAGTCTCTAATATCTTCGTTATCTTTAAATTCGTTCCTCTTTCTCTATAATTATTCCGTTTCTTGAAATAGTAGCAACGGAATCGCGAGCTAGGACTCCGTTTCCCTCCCTGCCAGCTTATGAATCCTTCTCTTTTTTCATAATGTCTAGTTGGATAATCTTTTTTTTTTCTTTTTGCTACCTCTTGATATTGATATCTATGATTAATTTTCATGCAATGCAAGTCCTAAATCTTAAAGGAATCTTATCTCTTTCCGTTCAGATTATTTGATTCTTAAAGTAATAGATTCCGTCTAAGATTATCAATTAACCAATATGGGTTGAGCTAGTGGTAGACAGAAAGACATAGCCTCAATAAATAGCTAAGAAGTTAAGGGTTCAATCCATGACAGTCAACTACCTAGGAATCAATTTTAGTTTCTTTGACTTACAAATGTTGTGTGGTCTAATGGATTGTTCCGTGGATTCGTCGAGGTGGACATAAGCTGGTCCAAACATTACAGATATCAAAATAATAATGATAATAAATAATAATCTAAAACTGTCAATTGTTTTGACATTTTATTGTGAATGTTCTAAATTGTTTGGATTGTAAGTTCTGGAGATGATTTTAATTGAAATCCTTGCTATTGGTTATTACACTTGATTTACCGATCATGTTCATGTTTTTTAAAAAATATTGTTCTATAAATTCCATTGGTTGATTCAAATTAGGAGAAATGAAGATAAAAATTTTGTTCTTTAATTATCTTGTACAAAACAAGAAGATATCATTTATTTTTTATTTATTTATTGCATATAGTACTTTATCAACAGATATGTCGTGATCATGATGATGCTGAGACTCCATTGATTTACAACTCAGCAGAGTTAAACAGAGCTGCAGTTAAAGATAAGACTGGGAGATGGGCAAGGGCGAATTTTAAGATAGTTCTTTCCTACCATGGAAATTCTTTTGATGGGTGGCAAAAGCAGCCAGGCTTGAATACTGTTCAGGGGTAAGCTTATTTCATGGAATTCACCGTATGCACAAGTTTGTATGCAATTGGGAGCTAGTGACACTCTTTTCATTATTGAATTTTTAAACTGAAGAGTTGTTAAGAACTGTAAATGTAATTTATAGTAAGTGTTTGAGAAGTTAGTTCCAGAGGTACAATTGAAAATCTCATACCTTCATTTCAAATGAAACTTTCGTCTTGTGGACAATGCCCAAGTTAAGTCATTCAGCCTTGTTAATCTTGCCTTTCTGGTACCGTATCTTCTTATTCCAGTACGAGAGTTTAAAGTAATGTTTTAATATCTTTAGATTGGATGTATAAATAGTTTTATTTCAGTCCAGAGATGGAAAACACTGATGTATATAGGAGGATTATGTTTACTTGCATCCTTTGGCAGCTTGGTAGAAAGATCTCTAGGGAAGTTTGTAGATGAGAAAAAAGCTCAGATGCTGAAAGATAAATGCTTACCATTAGAAGGATGTGCTGTGGTTGCTGGGCGCACTGACAAAGGGGTGACAGCTCTGCGACAAGTTTGCTCATTTTGTATGTTAGCTTCCTAATTTCTGTTGATATGATTTTTTATTGTATATTTAATTCCATAACTATGTTTTCAGTTCGTAGATTCTATCTCAGCTCAAAAATGAACTCTTATATTAGATTAAATTATGTCTTTTATATCATTTCGTAACATCTTTAATAGTTTGCAATTAATAGACTAGCCATTAATTGCTTTTAACATCCGTTTCATGAACTCCACTTTTGTTGTGCTTGACTTCAACACTCCAATAGTCAAATAGGCGACGTTGTCCTGACTGCTCTATGCTCGAAGTGTTGGAAGGGTGTGCCAGATTACCAGTTAAAAGCAATTAGTATTGAAACAAGGGAGGAGCGAAGTCCAAGAATAACTTCCCAGTAAAATGTAGCAATAGTAAAAAAAAAACTTTGTACTTCTGATGGCATTTAGTTAGGTTAATATTTAGAAGCTTTTACCAAGATTCCCTTCGCTGATTATTACTTCAAGTAGTTCTGCAGAGTGGAAGTTGGGAAGGGATTTCTTTTTACCATCTGCAGAATTTCTTGTGTGATGCTATCGAAAGGAAAAGTTGGCGAAGAAGATTGAAGTTTTTATTGGAATTGTTTCCAATCTGTGCCTTTATACCAACAATAAGATTCAAGCTAGAATTCCAAACTACTTGGCCATCACTGTAGCAATAATAGAATTCAACCTGAACCATGCTTCCTTTGGTTTGAATTCTTTAACATAAATACATACATGGAATTTGTTTAGAAAGAGCAATTACTGTATGTGTACTTTTTGAGTTTTTGCTGTTTCTTTCCATTTTGGTTTTAAATTACACATGGAGAGAAATATTCTCTTTCTGACTTCACCCACTTAATTTTATTATTGTTTTCTATTTTAGAGAATCAATGTTCATCTTCAGTTAAACTCGCACACTTGTAGATACTTGGCGCACGGATGTTAAACCTCAAGACATTGAAGATTCCATCAATAGTGCAGCTCCTGGAAAACTCAGAACATTATCTGTGTCTCAGGTAAAATTAAGGTTATTGGAAATGAATGCGGTGCCCCCGTGTTTAGCTTTAATAGTGTTGCAGAAGTAATTTGTTTATTTCTCTTTCAGATACATGTAATTTCACAAGTTACTTACTGTTGTAGGTCTCTCGAATCTTCCATCCAAACTTTTCTGCTAAATGGAGGCGATATCTGTATATTCTTCCTCTGAATGATGGAGAGAACATGGAGCCAGATTCTGCAATTTGGGAAGATGTAGAAAATAGAGAAGAGGAAAATTGTGTTAAAATAGAAGCCTTAAATGGTGAAAAATGTGTGGACGGGATTCATGATAATTTGGTCCTCAGTCCAAATGATGACGAGCTTGTGTCGGCTGATAAACCTCAAACATTTAGTATAAGGAGGGTTAACCAACTACTTAGGAAACTAGAAGGGAAGTTGTTGTCGTACAAGATGTTTGCACGTGACACCAAAGCATCTAGAAATGAGTGAGAATCATGAACTGATCCCATTATCTGCTCTTTTTTGGAAGTCATTCTAGCTTCTAATTTTATTATTTCTTGTTGTTTTTCTTCTTATTCCGTTTATAAAGAATATCGCCAATTTTCTTCTTATTTCTGCTAGTCACTCTTTTAAGAGTTATATATAGAAATGTGAAGAGGGATGAATCCAGGCGAATAACACTTCTGTGGGATCTCCGGATTGAAAGGAACAACACTTTTTTCTCAATCTCCTTCATACAAATTAGGAAAATGAGGAGAGTTAGATAATGGAAAATTTTAAGCATCAACATGATAATTTTTGTCAAGCCTAGTTTTAAGGATCACCAAATGTAATTAACTATTGTCTGTTCTTCTGGTTCTCATTCTGTATTGAGTTCTTTTGAGTGAGGAAAAATAAATAAAATAATTAAAAGATTTTTTATTGTACATATGATGAGGATAGCTAGTCTTAAGACTGGCTTAACAAAGTTATACACGTTTATTGGTCAATGACTTTTTGTTTGTGTCAACATGTGATCAGTATAATTCTAGTATTAAAAAATACAGGGAGAGAGAGAGAGAGAGATTAATGTACTTGTATCCTGAACATTATCAGGATAGATAGTCACTGACTAAACAAAGTTAGTTATAGAATTAATATGTCAAGATTTTTGTTTTGTTTTGTCAAATATGTGATTAAAGTACTTGCTTGTCGCTTTCTTTTCGAAAACGTTTTCTTATCAATGACAGGAAGATGTTCCGAACTTTCTGATATGTACTAATGGAAACTATTGTCCTTTTCAGAGGTCCACCTACGGAGTGTTTTGTTTATCATGCACGAGCAGCGGAAACTAGATTGCCATGCTTGGTATTTTTCCTACTTGTGGTCCTCTTCATACTGTTGTCCTCCTTTTCTATGATTGTCCTTTTCCTTCTACACTTCTCCCCTCTTGAAATCTATCTGTAGTGTTGTAACAATATTCTATACTTTATAGCTCACTTACACTGAAATGAGGTAGAACCATATTATTTGCGTTGTGCTTTTGACTAATTCAGAACACTGAAAACAGAAGATGAGCTTGTGGAAGAGTATGAACCGAGGAAACTTAGAAGAAAATTACTTTTACATTCTATCTTCGATGTGAAGTATTTGCATAGCAAACTAACTGTAGTTATGTGCTCGGTTGAACGAAAATTCAAATTTTATTGACAAAGGTTGCTCTTGGCCTCTCTTCTGTTTCTCTTCTTCTTATTAGTTTTTGTTTTCTAAACTTCTCTCTTTTCTCTCTATACTTTTTTTTTTTTTATTTTAGGAGAGGTTGTTTCCCTCATGTTTATATAGGGTTTTGTTTCTCAAATTGATACCTTATTCTTGGTTCGTTTTGGCTTGGATTTTCCTGATAGTGAAAGCGTGTTTCCTATTCCTCTCAACATGCTATCAACATTTTTCTCTATTGAACCGAATCTTTTGTAGCATCATCTGGGCTTCTTCCTACATTTAATCTTTTTCTGTCCATTTTTTTAAATCTGTTTATTCAACAAATCTAATGAGCTAATGCCACTACAAATTTGGGTATCTGACTTAGTGTTCTATTGACAGGAGCAAGGAGTAGGAAGAAGTGTTATGTGCGTTGAGCTGGTTGCTAATCGCTTCCTGCGGAAGGTATCATACCATCTCTTGGATTGGCCTATGCTTTAGATTATATTGTACAGATCGTAAAATTGCTCTATTAGGATTCAGATAATTCTTTTTTCAACTGCTTAAACTTGAGATTTAATATCTTAAATATCAGGCTATCAACAAACGGAATTTCCCCTTCGTTTTAGCTAAATGAAAAATGTCACTAATTATTATGTCTTCTGCTAAATACTTGGTTTCTTTAGCAGTTCAACCAACTAATGTTTAATATTTTACGAGTTCTCTTCGTACTCAAATGTTGTAGAGTCAAGTCGTGAGATTTGTTGAGTTGTTTTGCATGTAAGCTAGTTTGGACACTCACGAATATTAAAATAATGATAATAATAATGGAATTGAATGATGACCCTTGCAGATGGTACGGGTACTTGTTGCGACAGCAATTAGAGAAGCAGCTGCTGGTGCCGGAGAGGATGCGTTACTAGAGCTGATGGTTGCCACATGTCGACGTGCCACTGCCCCACCTGCGCCTCCTGATGGCCTCAGTCTTGTTGACGTAGGGTATACAGAATTTGATTCACAAATTTGCTTCATTTTAAATGACTAATTTTGCCCCTTCTTACGATCAAAGGTTAGTGATCACCCACCCTTTTGATTGGTGGTGGTATTATTACCATATTGATTTAGTGATTGCATTGTGTTAAAAGAAATTCCTACTTAGGGTTTGAAAGTTGGTATGCATTTTATCACACATCACTTTAGGGTGTTTGTATTTGTGTATGGTGAGAGACTGAGTTTTGTTTTGATCAACTCTTCTCACGAGTTGAATCAAATTTTCAAACGGATTGGTAAGACAACTCTAAAGAGAATGAACATAGTTTATTTAAAACTAATTACAACCTTTTTTGTTTCTGTTTTTAAGTCGCCTCATTAGCCACTTTTGTAGGTAACTTGTTAATTCACTATATAATTGAGTGACAATGAGTTTGGATCAAACTGCCAACATAAGCTTAGCTAAATTGGTATCTATATGTTCTCGAGAACAAGAGGTCTCAAGTTCAATTCACTCACTCCCAAGTTGGGCTTAAAAGTGCTTTTAAAAAAAAAAAAAAACGAAACAAAAAGGAAAAAGTTTGGATCAAACTATTTATTATTATAATTATAAAAGGTCAACTTTTACCTTTTTAGTTTTGGGTTTGAGTTCACTTTTGATTCTAAAGTTCCAAAATTTTATACTTTTACCTTTGCATTTTAAGTTTTGCTTAGCCTTGAGAGGTGTGTGCTCGTGTAAAAACAGCTGAGATTTGTTATTTGTTTAAAAGGTATTCCTAATTCTTTCTATTCATGAATGTTTCAAAATTACCTTTAAAGTAAAAGTCAAAATAGTCCTAACATTCTAACAAATTTTTACTCAAATCATTTTTTCTAGGTTCAATTTAACTTTTGGCAGAACATAGTCTTTTAACACATGCATTTCACATGGTATTTCTAATTATTCTATCATCTTAAATAATATTTTTCATTTCATTTGTATTATATGAACGTTTTTTTTTATTCTAAAATTAATAACCTTCTATTTGAGATTGAGGAAATTACACATTTTTTAGGGAAGTTGTTTTAAATGGTACAACTCTATATCTACACTATTTCATGTTTGCTTACTTCACTGCTTTTTCTAAAATTAAATTTTCCTTTTCTTAAAAAAAATAGTACTCAAGAATTTTAGACATTTCCACCCAGGAGAGAATTTACCAATCATGTATCAAACTTCCTAAGTATTGTTGACCCAATAGCAAACACACATTAATTTTTTTTCCCATTCTACATTCAAAACCTATAAAACTATTTTTCATCGAAAAGCCCTTATCTTTCATCTTCAACCTCTCACCCTTTAGCAAATGAATTTTTTTTGTCATCTCATGGAGGTCTGTATGTCTGTCTCTGTCTCTGTTGTTGCTTTTTATAAAGCGTTTTTTGTTTGTTTGTTTGTTAACTCAATCTTCATCTCACATGGTGAAGTTGAGTTCATCAGATAATCCTCTTGAAGATCTAATATCAGCTTCACTTGCATATGAAGAATAGAAGTCTTCATCCCCATCTTTTTCTTTCACTTCCTCAATCTTCTCCACAGCTTCTCGTAAATCCAACCGTTTCTCAAAGTCGCTTTCGCAACACGCCATTGCAATTCTTAGAAGCTTCATCATTTCACCCTCACTGCTCTTGGTTGGTCCCATTTCCTTATCAAATACTCGGGTGTTCCATTCTTTTTCAGGAATTGATTTTACCCAACTTGCCAAATCTTCCTCTTCCCCGCTCTTGTTCTGATGCAAAAAGTTGGCTGGGAATTGACCTGATAGAATTTCTAGGATCAATAGCCCAAAACTCCATACGTCTGTCTTCTTTGTAATGCGACTTTGTTGCGAGTACTCCGGGGATTTGTAGGCCACCATTAGCTCATGAGCATGCTCTTGGTTCACGACCGGGATTAGGCCGTAGTCAGAAAGAAGGGGCTCGTAATTTGCCTTTAGAAGTACATTTGAGGACTTGAGATGGCCGTGTGGGGTTATCAAACTTGGAAGCTCACTGTATAGATATCGAAGACCCTTTCCAACGCCCTTGATGATCTTCAATCTTGCAGGCCAATCCAGGGCTGGTTGTCCCACAGCTTTATGTCCTAAGAAGGAAATGGACAACATAATACAATTCAGCCAACCAAATTTTGAACTATTCAGACGAGTACTAAACTCAAATGTTTAGTCTTTGTTTGGTAATCATTTCTTTTTTTGTTTTTGGTTTTTGAAAATTAATTCTATTCTTCCTTTTTTTTACTGCATCTTTCTTAAACTAAAACTGTTTTTTTTTTTTAATTTTCAAAACTTTGTTTGATTTTGAAACATTGGTAAAAAGAAGATAACAAAGTAAGAGATTTAGAGGTAAAAAGGGTACTTTTCAAAAACTAAAAACTAAAATTAACGGGGTTTAGTCAACTAATGTATGTAACACTCTCTCTTATTTATGGATTTCTTAAAAGTTCAAACATAAGAAACTACTAACATCTTGCTGTGCTCCTACTTAATCCACAAGTTTAAGTTGATATAGTTTATTGTATGTCAATTTTTTACGCAGATTATTAACATGTTCCTTCACTTATGAGTTATGTTCTACTAGAACTTAATTATGAGAAATTATAGTAAACTCAAAAGTGTAAGTTGGATAGGTTACGAAATTTTTTAATCTTTTATCAATATTTTTAGTCGGGTTTAATGAGACGTGTGTTGAATTAAAGGTACAAAAAAGGATGAACATACCATGAAGTTGAACAGCCAAGCTGCCCTTCTCAACGTAATCTGTTATGAGAAGCTTTTCTTCTTTTTTGTAATAGTAAGCCACAAGAGGAAGCAAATTAGTGTGTTTCAATCTTCCAATTCTTCTCATATGTTCTTGGAATTCCTCTCTACCCACATTGTTCATTTGCTTAAACCTCTTTACAACCATCACAGGTCCATTGGTCAAAGCTGCTTTGTAAGAAGAACCAAAGCACCCACTTCCTAGGATTTCTGCTGAGGCTTTAAGCAAATCTGATAAATCAAACCTCTCTGAATCCTCTCTTACAAATGACAATTTGGCACTATCGGCTGACCGTTTTCCTGTCACGCTTCCATTACTCGAGCCACGGTCTGGTGACTTCACCCCGGCTCCTGGATCTAGCTCACTAGCACTTGGAGATTTTCCGTTGGCTGGATCTTCTTCGTTAGACGATGATTGGTTACAACGGCTCAGGATGACTATTCCTGCACCAATGGCAAGAAGAGCCAATGTCACAGCTATTGAAACCATGATAATGCTCCCAATTGATGGCACCTTTGCGGCGTTGCATGGTTTCTTAAGTGGTGCTCCACATAAACCTTCAATGCCTGCATGCACGAGAATCAGCTTGTTAGAAAGTTAGAACGACATATGATAGAGTTGACAGAAGAAGTTTCATAATGGAATCTAAATTAGATACAAATTTTCCTCCGAGCTTTGTGTTATCGATTGATCCAAAAGTGTGAGATGACGAGTGAAATTAGATTTAATATTGATTAATCTATCCTTTACCTTTATTCGTGGCCTTAAAACAAGTAGATGAGTCGATAAATGAAAGTAAATATTAATTGAGGAGGAAGTGACATTGCATGGTTTTGAATAATT

mRNA sequence

AATCTCGTCCCTGCCCGACGGCGGCTGCAACTGCAAAATACGGTCGTCCGCTCTAAGGCGGGGTGGGGCGGGCGGTGGTTATGATACCAAATCCGAGGGCTAGACTTGTATCACCGTCAAGTGCCGGTTTTGGTTTGAAGATTCTGATGGAGAATCGAGCTCAACAAAAAGATTATCTTCACTATAACCACACTGACCGCTGCAGAAATGCTAGATGGACTGCCAGAGAAAGCTTTCAATTCATGTATGGAAGGCCGTGGCAAGAAGTGCTTGATTTTTACTCGCATGCTGTTAATGGAAGGTTGTCACTTAGCTCATTGCTTGGAACTGAGATATGTCGTGATCATGATGATGCTGAGACTCCATTGATTTACAACTCAGCAGAGTTAAACAGAGCTGCAGTTAAAGATAAGACTGGGAGATGGGCAAGGGCGAATTTTAAGATAGTTCTTTCCTACCATGGAAATTCTTTTGATGGGTGGCAAAAGCAGCCAGGCTTGAATACTGTTCAGGGCTTGGTAGAAAGATCTCTAGGGAAGTTTGTAGATGAGAAAAAAGCTCAGATGCTGAAAGATAAATGCTTACCATTAGAAGGATGTGCTGTGGTTGCTGGGCGCACTGACAAAGGGGTGACAGCTCTGCGACAAGTTTGCTCATTTTATACTTGGCGCACGGATGTTAAACCTCAAGACATTGAAGATTCCATCAATAGTGCAGCTCCTGGAAAACTCAGAACATTATCTGTGTCTCAGGTCTCTCGAATCTTCCATCCAAACTTTTCTGCTAAATGGAGGCGATATCTGTATATTCTTCCTCTGAATGATGGAGAGAACATGGAGCCAGATTCTGCAATTTGGGAAGATGTAGAAAATAGAGAAGAGGAAAATTGTGTTAAAATAGAAGCCTTAAATGGTGAAAAATGTGTGGACGGGATTCATGATAATTTGGTCCTCAGTCCAAATGATGACGAGCTTGTGTCGGCTGATAAACCTCAAACATTTAGTATAAGGAGGGTTAACCAACTACTTAGGAAACTAGAAGGGAAGTTGTTGTCGTACAAGATGTTTGCACGTGACACCAAAGCATCTAGAAATGAAGGTCCACCTACGGAGTGTTTTGTTTATCATGCACGAGCAGCGGAAACTAGATTGCCATGCTTGGAGCAAGGAGTAGGAAGAAGTGTTATGTGCGTTGAGCTGGTTGCTAATCGCTTCCTGCGGAAGATGGTACGGGTACTTGTTGCGACAGCAATTAGAGAAGCAGCTGCTGGTGCCGGAGAGGATGCGTTACTAGAGCTGATGGTTGCCACATGTCGACGTGCCACTGCCCCACCTGCGCCTCCTGATGGCCTCAGTCTTGTTGACGTAGGGTATACAGAATTTGATTCACAAATTTGCTTCATTTTAAATGACTAATTTTGCCCCTTCTTACGATCAAAGGTTAGTGATCACCCACCCTTTTGATTGGTGGTGGTATTATTACCATATTGATTTAGTGATTGCATTGTGTTAAAAGAAATTCCTACTTAGGGTTTGAAAGTTGGTATGCATTTTATCACACATCACTTTAGGGTGTTTGTATTTGTGTATGGTGAGAGACTGAGTTTTGTTTTGATCAACTCTTCTCACGAGTTGAATCAAATTTTCAAACGGATTGGTAAGACAACTCTAAAGAGAATGAACATAGTTTATTTAAAACTAATTACAACCTTTTTTGTTTCTGTTTTTAAGTCGCCTCATTAGCCACTTTTGTAGGTAACTTGTTAATTCACTATATAATTGAGTGACAATGAGTTTGGATCAAACTGCCAACATAAGCTTAGCTAAATTGGTATCTATATGTTCTCGAGAACAAGAGGTCTCAAGTTCAATTCACTCACTCCCAAGTTGGGCTTAAAAGTGCTTTTAAAAAAAAAAAAAAACGAAACAAAAAGGAAAAAGTTTGGATCAAACTATTTATTATTATAATTATAAAAGGTCAACTTTTACCTTTTTAGTTTTGGGTTTGAGTTCACTTTTGATTCTAAAGTTCCAAAATTTTATACTTTTACCTTTGCATTTTAAGTTTTGCTTAGCCTTGAGAGGTGTGTGCTCGTGTAAAAACAGCTGAGATTTGTTATTTGTTTAAAAGGTATTCCTAATTCTTTCTATTCATGAATGTTTCAAAATTACCTTTAAAGTAAAAGTCAAAATAGTCCTAACATTCTAACAAATTTTTACTCAAATCATTTTTTCTAGGTTCAATTTAACTTTTGGCAGAACATAGTCTTTTAACACATGCATTTCACATGGTATTTCTAATTATTCTATCATCTTAAATAATATTTTTCATTTCATTTGTATTATATGAACGTTTTTTTTTATTCTAAAATTAATAACCTTCTATTTGAGATTGAGGAAATTACACATTTTTTAGGGAAGTTGTTTTAAATGGTACAACTCTATATCTACACTATTTCATGTTTGCTTACTTCACTGCTTTTTCTAAAATTAAATTTTCCTTTTCTTAAAAAAAATAGTACTCAAGAATTTTAGACATTTCCACCCAGGAGAGAATTTACCAATCATGTATCAAACTTCCTAAGTATTGTTGACCCAATAGCAAACACACATTAATTTTTTTTCCCATTCTACATTCAAAACCTATAAAACTATTTTTCATCGAAAAGCCCTTATCTTTCATCTTCAACCTCTCACCCTTTAGCAAATGAATTTTTTTTGTCATCTCATGGAGGTCTGTATGTCTGTCTCTGTCTCTGTTGTTGCTTTTTATAAAGCGTTTTTTGTTTGTTTGTTTGTTAACTCAATCTTCATCTCACATGGTGAAGTTGAGTTCATCAGATAATCCTCTTGAAGATCTAATATCAGCTTCACTTGCATATGAAGAATAGAAGTCTTCATCCCCATCTTTTTCTTTCACTTCCTCAATCTTCTCCACAGCTTCTCGTAAATCCAACCGTTTCTCAAAGTCGCTTTCGCAACACGCCATTGCAATTCTTAGAAGCTTCATCATTTCACCCTCACTGCTCTTGGTTGGTCCCATTTCCTTATCAAATACTCGGGTGTTCCATTCTTTTTCAGGAATTGATTTTACCCAACTTGCCAAATCTTCCTCTTCCCCGCTCTTGTTCTGATGCAAAAAGTTGGCTGGGAATTGACCTGATAGAATTTCTAGGATCAATAGCCCAAAACTCCATACGTCTGTCTTCTTTGTAATGCGACTTTGTTGCGAGTACTCCGGGGATTTGTAGGCCACCATTAGCTCATGAGCATGCTCTTGGTTCACGACCGGGATTAGGCCGTAGTCAGAAAGAAGGGGCTCGTAATTTGCCTTTAGAAGTACATTTGAGGACTTGAGATGGCCGTGTGGGGTTATCAAACTTGGAAGCTCACTGTATAGATATCGAAGACCCTTTCCAACGCCCTTGATGATCTTCAATCTTGCAGGCCAATCCAGGGCTGGTTGTCCCACAGCTTTATGTCCTAAGAAGGAAATGGACAACATAATACAATTCAGCCAACCAAATTTTGAACTATTCAGACGAGTACTAAACTCAAATGTTTAGTCTTTGTTTGGTAATCATTTCTTTTTTTGTTTTTGGTTTTTGAAAATTAATTCTATTCTTCCTTTTTTTTACTGCATCTTTCTTAAACTAAAACTGTTTTTTTTTTTTAATTTTCAAAACTTTGTTTGATTTTGAAACATTGGTAAAAAGAAGATAACAAAGTAAGAGATTTAGAGGTAAAAAGGGTACTTTTCAAAAACTAAAAACTAAAATTAACGGGGTTTAGTCAACTAATGTATGTAACACTCTCTCTTATTTATGGATTTCTTAAAAGTTCAAACATAAGAAACTACTAACATCTTGCTGTGCTCCTACTTAATCCACAAGTTTAAGTTGATATAGTTTATTGTATGTCAATTTTTTACGCAGATTATTAACATGTTCCTTCACTTATGAGTTATGTTCTACTAGAACTTAATTATGAGAAATTATAGTAAACTCAAAAGTGTAAGTTGGATAGGTTACGAAATTTTTTAATCTTTTATCAATATTTTTAGTCGGGTTTAATGAGACGTGTGTTGAATTAAAGGTACAAAAAAGGATGAACATACCATGAAGTTGAACAGCCAAGCTGCCCTTCTCAACGTCCATTGGTCAAAGCTGCTTTGTAAGAAGAACCAAAGCACCCACTTCCTAGGATTTCTGCTGAGGCTTTAAGCAAATCTGATAAATCAAACCTCTCTGAATCCTCTCTTACAAATGACAATTTGGCACTATCGGCTGACCGTTTTCCTGTCACGCTTCCATTACTCGAGCCACGGTCTGGTGACTTCACCCCGGCTCCTGGATCTAGCTCACTAGCACTTGGAGATTTTCCGTTGGCTGGATCTTCTTCGTTAGACGATGATTGGTTACAACGGCTCAGGATGACTATTCCTGCACCAATGGCAAGAAGAGCCAATGTCACAGCTATTGAAACCATGATAATGCTCCCAATTGATGGCACCTTTGCGGCGTTGCATGGTTTCTTAAGTGGTGCTCCACATAAACCTTCAATGCCTGCATGCACGAGAATCAGCTTGTTAGAAAGTTAGAACGACATATGATAGAGTTGACAGAAGAAGTTTCATAATGGAATCTAAATTAGATACAAATTTTCCTCCGAGCTTTGTGTTATCGATTGATCCAAAAGTGTGAGATGACGAGTGAAATTAGATTTAATATTGATTAATCTATCCTTTACCTTTATTCGTGGCCTTAAAACAAGTAGATGAGTCGATAAATGAAAGTAAATATTAATTGAGGAGGAAGTGACATTGCATGGTTTTGAATAATT

Coding sequence (CDS)

ATGATACCAAATCCGAGGGCTAGACTTGTATCACCGTCAAGTGCCGGTTTTGGTTTGAAGATTCTGATGGAGAATCGAGCTCAACAAAAAGATTATCTTCACTATAACCACACTGACCGCTGCAGAAATGCTAGATGGACTGCCAGAGAAAGCTTTCAATTCATGTATGGAAGGCCGTGGCAAGAAGTGCTTGATTTTTACTCGCATGCTGTTAATGGAAGGTTGTCACTTAGCTCATTGCTTGGAACTGAGATATGTCGTGATCATGATGATGCTGAGACTCCATTGATTTACAACTCAGCAGAGTTAAACAGAGCTGCAGTTAAAGATAAGACTGGGAGATGGGCAAGGGCGAATTTTAAGATAGTTCTTTCCTACCATGGAAATTCTTTTGATGGGTGGCAAAAGCAGCCAGGCTTGAATACTGTTCAGGGCTTGGTAGAAAGATCTCTAGGGAAGTTTGTAGATGAGAAAAAAGCTCAGATGCTGAAAGATAAATGCTTACCATTAGAAGGATGTGCTGTGGTTGCTGGGCGCACTGACAAAGGGGTGACAGCTCTGCGACAAGTTTGCTCATTTTATACTTGGCGCACGGATGTTAAACCTCAAGACATTGAAGATTCCATCAATAGTGCAGCTCCTGGAAAACTCAGAACATTATCTGTGTCTCAGGTCTCTCGAATCTTCCATCCAAACTTTTCTGCTAAATGGAGGCGATATCTGTATATTCTTCCTCTGAATGATGGAGAGAACATGGAGCCAGATTCTGCAATTTGGGAAGATGTAGAAAATAGAGAAGAGGAAAATTGTGTTAAAATAGAAGCCTTAAATGGTGAAAAATGTGTGGACGGGATTCATGATAATTTGGTCCTCAGTCCAAATGATGACGAGCTTGTGTCGGCTGATAAACCTCAAACATTTAGTATAAGGAGGGTTAACCAACTACTTAGGAAACTAGAAGGGAAGTTGTTGTCGTACAAGATGTTTGCACGTGACACCAAAGCATCTAGAAATGAAGGTCCACCTACGGAGTGTTTTGTTTATCATGCACGAGCAGCGGAAACTAGATTGCCATGCTTGGAGCAAGGAGTAGGAAGAAGTGTTATGTGCGTTGAGCTGGTTGCTAATCGCTTCCTGCGGAAGATGGTACGGGTACTTGTTGCGACAGCAATTAGAGAAGCAGCTGCTGGTGCCGGAGAGGATGCGTTACTAGAGCTGATGGTTGCCACATGTCGACGTGCCACTGCCCCACCTGCGCCTCCTGATGGCCTCAGTCTTGTTGACGTAGGGTATACAGAATTTGATTCACAAATTTGCTTCATTTTAAATGACTAA

Protein sequence

MIPNPRARLVSPSSAGFGLKILMENRAQQKDYLHYNHTDRCRNARWTARESFQFMYGRPWQEVLDFYSHAVNGRLSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARANFKIVLSYHGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRYLYILPLNDGENMEPDSAIWEDVENREEENCVKIEALNGEKCVDGIHDNLVLSPNDDELVSADKPQTFSIRRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCLEQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMVATCRRATAPPAPPDGLSLVDVGYTEFDSQICFILND

Homology

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BLAST of Pay0018469 vs. ExPASy Swiss-Prot
Match: B5YDX5 (tRNA pseudouridine synthase A OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) OX=309799 GN=truA PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 6.9e-14
Identity = 50/135 (37.04%), Postives = 74/135 (54.81%), Query Frame = 0


Query: 119 NFKIVLSYHGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCAVVAG 178
           N+K+ LSY G  F G+QKQPG  TVQG +E+ L         ++L D+ + + G    AG
Sbjct: 3   NWKVELSYIGKDFWGFQKQPGKRTVQGELEKVL---------KLLFDEDIKVIG----AG 62

Query: 179 RTDKGVTALRQVCSFYTWRT-DVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKW 238
           RTD GV AL QV +F T  + +     +   +N   PG ++   V  V   FH  +SAK 
Sbjct: 63  RTDAGVHALGQVVNFKTKESKNFSCDKLYKVLNKLLPGDIKIKKVEIVDDNFHARYSAKR 122

Query: 239 RRYLYILPLNDGENM 253
           R Y+Y++  N+ +N+
Sbjct: 123 RWYIYVIYNNEEKNL 124

[Close]

BLAST of Pay0018469 vs. ExPASy Swiss-Prot
Match: B0SC03 (tRNA pseudouridine synthase A OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) OX=355278 GN=truA PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.6e-13
Identity = 53/163 (32.52%), Postives = 75/163 (46.01%), Query Frame = 0


Query: 119 NFKIVLSYHGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCAVVAG 178
           N+ +++ Y G  F+GWQKQ  L TVQ  +E +LG  +    A  L            VAG
Sbjct: 3   NYALLVEYDGTHFNGWQKQKNLPTVQSSIESALGIILRRNPASRLS-----------VAG 62

Query: 179 RTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWR 238
           RTD GV AL  VC+F T         +  S+N+  P  +   +V +V   FH  FS   R
Sbjct: 63  RTDTGVHALGMVCNFKTEHPIPNFHKLLVSLNALTPTGVSVKNVVEVPSDFHARFSCTGR 122

Query: 239 RYLYILPLNDGENMEPDS-AIWEDVENREEENCVKIEALNGEK 281
            Y+Y L  +  E+   +  A W       E    +++ L GEK
Sbjct: 123 EYIYKLYYSKYESSFVEGRAFWVKGHIDWERVKKQLQVLVGEK 154

[Close]

BLAST of Pay0018469 vs. ExPASy Swiss-Prot
Match: B0SJC4 (tRNA pseudouridine synthase A OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) OX=456481 GN=truA PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.6e-13
Identity = 53/163 (32.52%), Postives = 75/163 (46.01%), Query Frame = 0


Query: 119 NFKIVLSYHGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCAVVAG 178
           N+ +++ Y G  F+GWQKQ  L TVQ  +E +LG  +    A  L            VAG
Sbjct: 3   NYALLVEYDGTHFNGWQKQKNLPTVQSSIESALGIILRRNPASRLS-----------VAG 62

Query: 179 RTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWR 238
           RTD GV AL  VC+F T         +  S+N+  P  +   +V +V   FH  FS   R
Sbjct: 63  RTDTGVHALGMVCNFKTEHPIPNFHKLLVSLNALTPTGVSVKNVVEVPSDFHARFSCTGR 122

Query: 239 RYLYILPLNDGENMEPDS-AIWEDVENREEENCVKIEALNGEK 281
            Y+Y L  +  E+   +  A W       E    +++ L GEK
Sbjct: 123 EYIYKLYYSKYESSFVEGRAFWVKGHIDWERVKKQLQVLVGEK 154

[Close]

BLAST of Pay0018469 vs. ExPASy Swiss-Prot
Match: C0QZT8 (tRNA pseudouridine synthase A OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) OX=565034 GN=truA PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 7.7e-13
Identity = 45/126 (35.71%), Postives = 63/126 (50.00%), Query Frame = 0


Query: 119 NFKIVLSYHGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCAVVAG 178
           N KI + Y G  F GWQ QP L TVQG + +++ K   EK         + + GC    G
Sbjct: 3   NIKITIQYDGTDFYGWQIQPNLRTVQGEIYKAVQKVYGEK---------ITIYGC----G 62

Query: 179 RTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWR 238
           RTD GV AL QV +F   +  V    +  ++NS     LR +   ++   F+   SA +R
Sbjct: 63  RTDAGVHALGQVANFRVPKMLVPINKVHIALNSYLDRDLRIIKAEEMPDSFNARASATFR 115

Query: 239 RYLYIL 245
            YLYI+
Sbjct: 123 EYLYIV 115

[Close]

BLAST of Pay0018469 vs. ExPASy Swiss-Prot
Match: B8E1G5 (tRNA pseudouridine synthase A OS=Dictyoglomus turgidum (strain DSM 6724 / Z-1310) OX=515635 GN=truA PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.9e-12
Identity = 58/184 (31.52%), Postives = 87/184 (47.28%), Query Frame = 0


Query: 119 NFKIVLSYHGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCAVVAG 178
           N+K+ +SY G  F G+QKQPG  T+QG +E+ L    DE             E   + AG
Sbjct: 3   NWKLEISYIGKDFYGFQKQPGKRTIQGELEKVLSFLFDE-------------EIRVIGAG 62

Query: 179 RTDKGVTALRQVCSFYT-WRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKW 238
           RTD GV AL QV +F +          +   +N   P  ++   V  V   FH  +SAK 
Sbjct: 63  RTDTGVHALGQVVNFKSRGHKGFSCDKLHKVLNRLLPEDIKIKKVEIVDDSFHARYSAKR 122

Query: 239 RRYLYILPLNDGENMEPDSAIWEDVENREEENCVKIEALNGEKCVDGIHD--NLVLSPND 298
           R Y+Y++  ND  ++      W    +RE    + I + N  K   G+HD  N  ++ ++
Sbjct: 123 RWYIYVVYNNDERDLFLKDYSW--WISREINRELLIFSANLFK---GVHDFKNFCVTEDE 168

Query: 299 DELV 300
           D+ V
Sbjct: 183 DQTV 168

[Close]

BLAST of Pay0018469 vs. ExPASy TrEMBL
Match: A0A5A7UXE7 (tRNA pseudouridine synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004790 PE=3 SV=1)

HSP 1 Score: 907.5 bits (2344), Expect = 2.2e-260
Identity = 444/444 (100.00%), Postives = 444/444 (100.00%), Query Frame = 0


Query: 1   MIPNPRARLVSPSSAGFGLKILMENRAQQKDYLHYNHTDRCRNARWTARESFQFMYGRPW 60
           MIPNPRARLVSPSSAGFGLKILMENRAQQKDYLHYNHTDRCRNARWTARESFQFMYGRPW
Sbjct: 1   MIPNPRARLVSPSSAGFGLKILMENRAQQKDYLHYNHTDRCRNARWTARESFQFMYGRPW 60

Query: 61  QEVLDFYSHAVNGRLSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARANF 120
           QEVLDFYSHAVNGRLSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARANF
Sbjct: 61  QEVLDFYSHAVNGRLSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARANF 120

Query: 121 KIVLSYHGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCAVVAGRT 180
           KIVLSYHGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCAVVAGRT
Sbjct: 121 KIVLSYHGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCAVVAGRT 180

Query: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRY 240
           DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRY
Sbjct: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRY 240

Query: 241 LYILPLNDGENMEPDSAIWEDVENREEENCVKIEALNGEKCVDGIHDNLVLSPNDDELVS 300
           LYILPLNDGENMEPDSAIWEDVENREEENCVKIEALNGEKCVDGIHDNLVLSPNDDELVS
Sbjct: 241 LYILPLNDGENMEPDSAIWEDVENREEENCVKIEALNGEKCVDGIHDNLVLSPNDDELVS 300

Query: 301 ADKPQTFSIRRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCL 360
           ADKPQTFSIRRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCL
Sbjct: 301 ADKPQTFSIRRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCL 360

Query: 361 EQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMVATCRRATAPPAP 420
           EQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMVATCRRATAPPAP
Sbjct: 361 EQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMVATCRRATAPPAP 420

Query: 421 PDGLSLVDVGYTEFDSQICFILND 445
           PDGLSLVDVGYTEFDSQICFILND
Sbjct: 421 PDGLSLVDVGYTEFDSQICFILND 444

[Close]

BLAST of Pay0018469 vs. ExPASy TrEMBL
Match: A0A1S3BWI6 (tRNA pseudouridine synthase OS=Cucumis melo OX=3656 GN=LOC103494203 PE=3 SV=1)

HSP 1 Score: 907.5 bits (2344), Expect = 2.2e-260
Identity = 444/444 (100.00%), Postives = 444/444 (100.00%), Query Frame = 0


Query: 1   MIPNPRARLVSPSSAGFGLKILMENRAQQKDYLHYNHTDRCRNARWTARESFQFMYGRPW 60
           MIPNPRARLVSPSSAGFGLKILMENRAQQKDYLHYNHTDRCRNARWTARESFQFMYGRPW
Sbjct: 1   MIPNPRARLVSPSSAGFGLKILMENRAQQKDYLHYNHTDRCRNARWTARESFQFMYGRPW 60

Query: 61  QEVLDFYSHAVNGRLSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARANF 120
           QEVLDFYSHAVNGRLSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARANF
Sbjct: 61  QEVLDFYSHAVNGRLSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARANF 120

Query: 121 KIVLSYHGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCAVVAGRT 180
           KIVLSYHGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCAVVAGRT
Sbjct: 121 KIVLSYHGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCAVVAGRT 180

Query: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRY 240
           DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRY
Sbjct: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRY 240

Query: 241 LYILPLNDGENMEPDSAIWEDVENREEENCVKIEALNGEKCVDGIHDNLVLSPNDDELVS 300
           LYILPLNDGENMEPDSAIWEDVENREEENCVKIEALNGEKCVDGIHDNLVLSPNDDELVS
Sbjct: 241 LYILPLNDGENMEPDSAIWEDVENREEENCVKIEALNGEKCVDGIHDNLVLSPNDDELVS 300

Query: 301 ADKPQTFSIRRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCL 360
           ADKPQTFSIRRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCL
Sbjct: 301 ADKPQTFSIRRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCL 360

Query: 361 EQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMVATCRRATAPPAP 420
           EQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMVATCRRATAPPAP
Sbjct: 361 EQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMVATCRRATAPPAP 420

Query: 421 PDGLSLVDVGYTEFDSQICFILND 445
           PDGLSLVDVGYTEFDSQICFILND
Sbjct: 421 PDGLSLVDVGYTEFDSQICFILND 444

[Close]

BLAST of Pay0018469 vs. ExPASy TrEMBL
Match: A0A0A0LV59 (tRNA pseudouridine synthase OS=Cucumis sativus OX=3659 GN=Csa_1G025830 PE=3 SV=1)

HSP 1 Score: 871.7 bits (2251), Expect = 1.3e-249
Identity = 427/444 (96.17%), Postives = 433/444 (97.52%), Query Frame = 0


Query: 1   MIPNPRARLVSPSSAGFGLKILMENRAQQKDYLHYNHTDRCRNARWTARESFQFMYGRPW 60
           MIPNPRARLVSPSSAGFGLKILMENRAQ+KDYLHYNHTDRCR+ARWTARES+QFMYGRPW
Sbjct: 1   MIPNPRARLVSPSSAGFGLKILMENRAQRKDYLHYNHTDRCRSARWTARESYQFMYGRPW 60

Query: 61  QEVLDFYSHAVNGRLSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARANF 120
           QEVLDFYSHAVNGR SLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARA F
Sbjct: 61  QEVLDFYSHAVNGRFSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARATF 120

Query: 121 KIVLSYHGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCAVVAGRT 180
           KIVLSY GNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCA+VAGRT
Sbjct: 121 KIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRT 180

Query: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRY 240
           DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRT SVSQVSRIFHPNFSAKWRRY
Sbjct: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRY 240

Query: 241 LYILPLNDGENMEPDSAIWEDVENREEENCVKIEALNGEKCVDGIHDNLVLSPNDDELVS 300
           LYILPLNDGENMEPDS  WE+VENREEEN VKIEA NGEKCVDGIHDNLVLSPND ELVS
Sbjct: 241 LYILPLNDGENMEPDSTTWENVENREEENFVKIEASNGEKCVDGIHDNLVLSPNDQELVS 300

Query: 301 ADKPQTFSIRRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCL 360
           ADKPQTFSI RVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCL
Sbjct: 301 ADKPQTFSITRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCL 360

Query: 361 EQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMVATCRRATAPPAP 420
           EQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELM ATCRRATAPPAP
Sbjct: 361 EQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPAP 420

Query: 421 PDGLSLVDVGYTEFDSQICFILND 445
           PDGLSLVDVGYT+FDSQICFILND
Sbjct: 421 PDGLSLVDVGYTDFDSQICFILND 444

[Close]

BLAST of Pay0018469 vs. ExPASy TrEMBL
Match: A0A6J1C0W1 (tRNA pseudouridine synthase OS=Momordica charantia OX=3673 GN=LOC111007251 PE=3 SV=1)

HSP 1 Score: 763.5 bits (1970), Expect = 5.0e-217
Identity = 387/447 (86.58%), Postives = 402/447 (89.93%), Query Frame = 0


Query: 1   MIPNPRARLVSPSSAGFGLKILMENRAQQKDYLHYNHTDRCRNARWTARESFQFMYGRPW 60
           MIPNPRARLV  SSA FG K LMENRA QKDYLHYNHTDRCRNARWTARES+Q MYGRPW
Sbjct: 1   MIPNPRARLV--SSADFGCKFLMENRAPQKDYLHYNHTDRCRNARWTARESYQLMYGRPW 60

Query: 61  QEVLDFYSHAVNGRLSLSSLLGTEI--CRDHDDAETPLIYNSAELNRAAVKDKTGRWARA 120
           QEVLDFY HAVNGR S SSL GTE+    DH+DAE PLIYN++ELNRA+VKDKTGRWARA
Sbjct: 61  QEVLDFYFHAVNGRFSPSSLFGTEVKTVHDHNDAEIPLIYNTSELNRASVKDKTGRWARA 120

Query: 121 NFKIVLSYHGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCAVVAG 180
            FKIVLSYHGNSFDGWQKQPGLNTVQGLVE+SLGKFVDEKKAQ+LKD+CLPLEGCAVVAG
Sbjct: 121 TFKIVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQLLKDRCLPLEGCAVVAG 180

Query: 181 RTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWR 240
           RTDKGVTALRQVCSFYTWRTDVKP DIEDSINSAAP KLR LSVSQVSR FHPNFSAKWR
Sbjct: 181 RTDKGVTALRQVCSFYTWRTDVKPLDIEDSINSAAPRKLRVLSVSQVSRNFHPNFSAKWR 240

Query: 241 RYLYILPLNDGENMEPDSAIWEDVEN-REEENCVKIEALNGEKCVDGIHDNLVLSPNDDE 300
           RYLYI PL DGENMEPD AI ED EN REEEN  KIEALNGE   D I DNLVLS N +E
Sbjct: 241 RYLYIFPLKDGENMEPDFAIGEDAENCREEENYNKIEALNGE-FKDEILDNLVLSQN-EE 300

Query: 301 LVSADKPQTFSIRRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRL 360
           L S DKPQTFS+RRVN+LLRKLEGKLLSYKMFARDTKASRNEGPPTECF+YHARA E RL
Sbjct: 301 LASDDKPQTFSVRRVNRLLRKLEGKLLSYKMFARDTKASRNEGPPTECFLYHARAVEARL 360

Query: 361 PCLEQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMVATCRRATAP 420
           PCL+QGVGRSVMCVELVANRFLRKMVRVLVATAIRE AAGAGEDALL LM ATCRRATAP
Sbjct: 361 PCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREVAAGAGEDALLRLMDATCRRATAP 420

Query: 421 PAPPDGLSLVDVGYTEFDSQICFILND 445
           PAPPDGLSLVDVGY+EFD Q CFILND
Sbjct: 421 PAPPDGLSLVDVGYSEFDPQNCFILND 443

[Close]

BLAST of Pay0018469 vs. ExPASy TrEMBL
Match: A0A6J1EZC2 (tRNA pseudouridine synthase OS=Cucurbita moschata OX=3662 GN=LOC111440432 PE=3 SV=1)

HSP 1 Score: 760.8 bits (1963), Expect = 3.3e-216
Identity = 383/447 (85.68%), Postives = 405/447 (90.60%), Query Frame = 0


Query: 1   MIPNPRARLVSPSSA--GFGLKILMENRAQQKDYLHYNHTDRCRNARWTARESFQFMYGR 60
           MIPNPRA L+S S A  GFG+K LMENRAQ+KDYLHYNHTDRCRNARWT+RES+QFMY R
Sbjct: 1   MIPNPRAILLSSSGAGFGFGIKCLMENRAQKKDYLHYNHTDRCRNARWTSRESYQFMYER 60

Query: 61  PWQEVLDFYSHAVNGRLSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARA 120
           PWQEVLDFYSHAVNGRLSLSS LGTE  RDHDD E   + N+AELNRA  KD TGRWARA
Sbjct: 61  PWQEVLDFYSHAVNGRLSLSS-LGTETVRDHDDTEIQPVCNTAELNRAPGKDGTGRWARA 120

Query: 121 NFKIVLSYHGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCAVVAG 180
            FKIVLSYHGNSFDGWQKQP LNTVQG+VE+SLGKFVDEKKAQ LKD+CLP+EGCAVVAG
Sbjct: 121 TFKIVLSYHGNSFDGWQKQPELNTVQGVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAG 180

Query: 181 RTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWR 240
           RTDKGVTALRQVCSFYTWRTDVKPQDIE SIN+AAPGKLR LSVSQVSR+FHPNFSAKWR
Sbjct: 181 RTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWR 240

Query: 241 RYLYILPLNDGENMEPDSAIWEDVEN-REEENCVKIEALNGEKCVDGIHDNLVLSPNDDE 300
           RYLYI PL DGENMEP+ AIWEDVEN REEE+  KIEAL+GE C D I +NLVLS +D+E
Sbjct: 241 RYLYIFPLKDGENMEPNFAIWEDVENIREEEHRDKIEALHGE-CKDEILNNLVLSQDDEE 300

Query: 301 LVSADKPQTFSIRRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRL 360
             SA+KPQTFSI RVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARA E RL
Sbjct: 301 PASANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAMEARL 360

Query: 361 PCLEQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMVATCRRATAP 420
           PCL+QGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALL+LM ATCRRATAP
Sbjct: 361 PCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRRATAP 420

Query: 421 PAPPDGLSLVDVGYTEFDSQICFILND 445
           PAPPDGLSLVDVGYTEFD Q CFILND
Sbjct: 421 PAPPDGLSLVDVGYTEFDPQNCFILND 445

[Close]

BLAST of Pay0018469 vs. NCBI nr
Match: XP_008453520.1 (PREDICTED: tRNA pseudouridine synthase A [Cucumis melo] >KAA0058161.1 tRNA pseudouridine synthase A [Cucumis melo var. makuwa])

HSP 1 Score: 907.5 bits (2344), Expect = 4.5e-260
Identity = 444/444 (100.00%), Postives = 444/444 (100.00%), Query Frame = 0


Query: 1   MIPNPRARLVSPSSAGFGLKILMENRAQQKDYLHYNHTDRCRNARWTARESFQFMYGRPW 60
           MIPNPRARLVSPSSAGFGLKILMENRAQQKDYLHYNHTDRCRNARWTARESFQFMYGRPW
Sbjct: 1   MIPNPRARLVSPSSAGFGLKILMENRAQQKDYLHYNHTDRCRNARWTARESFQFMYGRPW 60

Query: 61  QEVLDFYSHAVNGRLSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARANF 120
           QEVLDFYSHAVNGRLSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARANF
Sbjct: 61  QEVLDFYSHAVNGRLSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARANF 120

Query: 121 KIVLSYHGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCAVVAGRT 180
           KIVLSYHGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCAVVAGRT
Sbjct: 121 KIVLSYHGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCAVVAGRT 180

Query: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRY 240
           DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRY
Sbjct: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRY 240

Query: 241 LYILPLNDGENMEPDSAIWEDVENREEENCVKIEALNGEKCVDGIHDNLVLSPNDDELVS 300
           LYILPLNDGENMEPDSAIWEDVENREEENCVKIEALNGEKCVDGIHDNLVLSPNDDELVS
Sbjct: 241 LYILPLNDGENMEPDSAIWEDVENREEENCVKIEALNGEKCVDGIHDNLVLSPNDDELVS 300

Query: 301 ADKPQTFSIRRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCL 360
           ADKPQTFSIRRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCL
Sbjct: 301 ADKPQTFSIRRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCL 360

Query: 361 EQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMVATCRRATAPPAP 420
           EQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMVATCRRATAPPAP
Sbjct: 361 EQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMVATCRRATAPPAP 420

Query: 421 PDGLSLVDVGYTEFDSQICFILND 445
           PDGLSLVDVGYTEFDSQICFILND
Sbjct: 421 PDGLSLVDVGYTEFDSQICFILND 444

[Close]

BLAST of Pay0018469 vs. NCBI nr
Match: XP_004137363.1 (uncharacterized protein LOC101205562 [Cucumis sativus] >KGN63901.1 hypothetical protein Csa_013558 [Cucumis sativus])

HSP 1 Score: 871.7 bits (2251), Expect = 2.7e-249
Identity = 427/444 (96.17%), Postives = 433/444 (97.52%), Query Frame = 0


Query: 1   MIPNPRARLVSPSSAGFGLKILMENRAQQKDYLHYNHTDRCRNARWTARESFQFMYGRPW 60
           MIPNPRARLVSPSSAGFGLKILMENRAQ+KDYLHYNHTDRCR+ARWTARES+QFMYGRPW
Sbjct: 1   MIPNPRARLVSPSSAGFGLKILMENRAQRKDYLHYNHTDRCRSARWTARESYQFMYGRPW 60

Query: 61  QEVLDFYSHAVNGRLSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARANF 120
           QEVLDFYSHAVNGR SLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARA F
Sbjct: 61  QEVLDFYSHAVNGRFSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARATF 120

Query: 121 KIVLSYHGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCAVVAGRT 180
           KIVLSY GNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCA+VAGRT
Sbjct: 121 KIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRT 180

Query: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRY 240
           DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRT SVSQVSRIFHPNFSAKWRRY
Sbjct: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRY 240

Query: 241 LYILPLNDGENMEPDSAIWEDVENREEENCVKIEALNGEKCVDGIHDNLVLSPNDDELVS 300
           LYILPLNDGENMEPDS  WE+VENREEEN VKIEA NGEKCVDGIHDNLVLSPND ELVS
Sbjct: 241 LYILPLNDGENMEPDSTTWENVENREEENFVKIEASNGEKCVDGIHDNLVLSPNDQELVS 300

Query: 301 ADKPQTFSIRRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCL 360
           ADKPQTFSI RVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCL
Sbjct: 301 ADKPQTFSITRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCL 360

Query: 361 EQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMVATCRRATAPPAP 420
           EQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELM ATCRRATAPPAP
Sbjct: 361 EQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPAP 420

Query: 421 PDGLSLVDVGYTEFDSQICFILND 445
           PDGLSLVDVGYT+FDSQICFILND
Sbjct: 421 PDGLSLVDVGYTDFDSQICFILND 444

[Close]

BLAST of Pay0018469 vs. NCBI nr
Match: XP_038878348.1 (tRNA pseudouridine synthase A [Benincasa hispida])

HSP 1 Score: 832.0 bits (2148), Expect = 2.4e-237
Identity = 407/445 (91.46%), Postives = 419/445 (94.16%), Query Frame = 0


Query: 1   MIPNPRARLVSPSSAGFGLKILMENRAQQKDYLHYNHTDRCRNARWTARESFQFMYGRPW 60
           MIPNPRARLVSPS AGFG KILMENRAQQKDYLHYNHTDRCRNARWTARES+Q MYGRPW
Sbjct: 1   MIPNPRARLVSPSGAGFGFKILMENRAQQKDYLHYNHTDRCRNARWTARESYQLMYGRPW 60

Query: 61  QEVLDFYSHAVNGRLSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARANF 120
           QEVLDFY HAVNGR SLSSL GTEI  DHDDAE PLIYN+AELNR +VKDKTGRWARA F
Sbjct: 61  QEVLDFYFHAVNGRFSLSSLFGTEIGHDHDDAEIPLIYNTAELNRVSVKDKTGRWARATF 120

Query: 121 KIVLSYHGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCAVVAGRT 180
           KIVLSYHGNSFDGWQKQPGLNTVQGLVE+SLGKFVD+KKAQMLKDKCLP+EGCAVVAGRT
Sbjct: 121 KIVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVDDKKAQMLKDKCLPIEGCAVVAGRT 180

Query: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRY 240
           DKGVTALRQVCSFYTWRTDV+PQDIEDSIN AAPGKLRTLSVSQVSRIFHPNFSAKWRRY
Sbjct: 181 DKGVTALRQVCSFYTWRTDVQPQDIEDSINRAAPGKLRTLSVSQVSRIFHPNFSAKWRRY 240

Query: 241 LYILPLNDGENMEPDSAIWEDVEN-REEENCVKIEALNGEKCVDGIHDNLVLSPNDDELV 300
           LYI PLNDGENMEPD AIWEDVE+ R+EEN  KIE LNGE+C D IHDNLV  PND+ELV
Sbjct: 241 LYIFPLNDGENMEPDYAIWEDVEDCRKEENYGKIEVLNGEECKDEIHDNLVFGPNDEELV 300

Query: 301 SADKPQTFSIRRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPC 360
           SADKPQTFSIRRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARA E RLPC
Sbjct: 301 SADKPQTFSIRRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAVEARLPC 360

Query: 361 LEQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMVATCRRATAPPA 420
           L+QGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELM ATCRRATAPPA
Sbjct: 361 LDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPA 420

Query: 421 PPDGLSLVDVGYTEFDSQICFILND 445
           PPDGLSLVDVGYTEFDSQ CFILND
Sbjct: 421 PPDGLSLVDVGYTEFDSQNCFILND 445

[Close]

BLAST of Pay0018469 vs. NCBI nr
Match: XP_022135239.1 (uncharacterized protein LOC111007251 isoform X1 [Momordica charantia])

HSP 1 Score: 763.5 bits (1970), Expect = 1.0e-216
Identity = 387/447 (86.58%), Postives = 402/447 (89.93%), Query Frame = 0


Query: 1   MIPNPRARLVSPSSAGFGLKILMENRAQQKDYLHYNHTDRCRNARWTARESFQFMYGRPW 60
           MIPNPRARLV  SSA FG K LMENRA QKDYLHYNHTDRCRNARWTARES+Q MYGRPW
Sbjct: 1   MIPNPRARLV--SSADFGCKFLMENRAPQKDYLHYNHTDRCRNARWTARESYQLMYGRPW 60

Query: 61  QEVLDFYSHAVNGRLSLSSLLGTEI--CRDHDDAETPLIYNSAELNRAAVKDKTGRWARA 120
           QEVLDFY HAVNGR S SSL GTE+    DH+DAE PLIYN++ELNRA+VKDKTGRWARA
Sbjct: 61  QEVLDFYFHAVNGRFSPSSLFGTEVKTVHDHNDAEIPLIYNTSELNRASVKDKTGRWARA 120

Query: 121 NFKIVLSYHGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCAVVAG 180
            FKIVLSYHGNSFDGWQKQPGLNTVQGLVE+SLGKFVDEKKAQ+LKD+CLPLEGCAVVAG
Sbjct: 121 TFKIVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQLLKDRCLPLEGCAVVAG 180

Query: 181 RTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWR 240
           RTDKGVTALRQVCSFYTWRTDVKP DIEDSINSAAP KLR LSVSQVSR FHPNFSAKWR
Sbjct: 181 RTDKGVTALRQVCSFYTWRTDVKPLDIEDSINSAAPRKLRVLSVSQVSRNFHPNFSAKWR 240

Query: 241 RYLYILPLNDGENMEPDSAIWEDVEN-REEENCVKIEALNGEKCVDGIHDNLVLSPNDDE 300
           RYLYI PL DGENMEPD AI ED EN REEEN  KIEALNGE   D I DNLVLS N +E
Sbjct: 241 RYLYIFPLKDGENMEPDFAIGEDAENCREEENYNKIEALNGE-FKDEILDNLVLSQN-EE 300

Query: 301 LVSADKPQTFSIRRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRL 360
           L S DKPQTFS+RRVN+LLRKLEGKLLSYKMFARDTKASRNEGPPTECF+YHARA E RL
Sbjct: 301 LASDDKPQTFSVRRVNRLLRKLEGKLLSYKMFARDTKASRNEGPPTECFLYHARAVEARL 360

Query: 361 PCLEQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMVATCRRATAP 420
           PCL+QGVGRSVMCVELVANRFLRKMVRVLVATAIRE AAGAGEDALL LM ATCRRATAP
Sbjct: 361 PCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREVAAGAGEDALLRLMDATCRRATAP 420

Query: 421 PAPPDGLSLVDVGYTEFDSQICFILND 445
           PAPPDGLSLVDVGY+EFD Q CFILND
Sbjct: 421 PAPPDGLSLVDVGYSEFDPQNCFILND 443

[Close]

BLAST of Pay0018469 vs. NCBI nr
Match: XP_023531012.1 (uncharacterized protein LOC111793396 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 763.1 bits (1969), Expect = 1.4e-216
Identity = 381/446 (85.43%), Postives = 403/446 (90.36%), Query Frame = 0


Query: 1   MIPNPRARLVSPSSA--GFGLKILMENRAQQKDYLHYNHTDRCRNARWTARESFQFMYGR 60
           MIPNPRARL+SPS A  GFG+K LMENRAQ+KDYLHYNHTDRCRNARWT+RES+QFMY R
Sbjct: 1   MIPNPRARLLSPSGAGFGFGIKCLMENRAQKKDYLHYNHTDRCRNARWTSRESYQFMYER 60

Query: 61  PWQEVLDFYSHAVNGRLSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARA 120
           PWQEVLDFYSHAVNGRLSLSS LGTE  RDHDD E   + N+AELNRA VKD TGRWARA
Sbjct: 61  PWQEVLDFYSHAVNGRLSLSS-LGTETVRDHDDTEIQPVCNTAELNRAPVKDGTGRWARA 120

Query: 121 NFKIVLSYHGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCAVVAG 180
            FKIVLSYHGNSFDGWQKQP L TVQG+VE+SLGKFVDEKKAQ LKD+CLP+EGCAVVAG
Sbjct: 121 TFKIVLSYHGNSFDGWQKQPELITVQGVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAG 180

Query: 181 RTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWR 240
           RTDKGVTALRQVCSFYTWRTDVKPQDIE SIN+AAPGKLR LSVSQVSR+FHPNFSAKWR
Sbjct: 181 RTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWR 240

Query: 241 RYLYILPLNDGENMEPDSAIWEDVENREEENCVKIEALNGEKCVDGIHDNLVLSPNDDEL 300
           RYLYI PL DGENMEP+  IWEDVEN  EE+  KIE L+GE C D I +NLVLS +D+E 
Sbjct: 241 RYLYIFPLKDGENMEPNFPIWEDVENSREEDRDKIEVLHGE-CKDEILNNLVLSQDDEEP 300

Query: 301 VSADKPQTFSIRRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLP 360
            SA+KPQTFSI RVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARA E RLP
Sbjct: 301 ASANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAMEARLP 360

Query: 361 CLEQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMVATCRRATAPP 420
           CL+QGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALL+LM ATCRRATAPP
Sbjct: 361 CLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRRATAPP 420

Query: 421 APPDGLSLVDVGYTEFDSQICFILND 445
           APPDGLSLVDVGYTEFD Q CFILND
Sbjct: 421 APPDGLSLVDVGYTEFDPQNCFILND 444

[Close]

BLAST of Pay0018469 vs. TAIR 10
Match: AT5G35400.1 (Pseudouridine synthase family protein )

HSP 1 Score: 498.0 bits (1281), Expect = 7.6e-141
Identity = 252/414 (60.87%), Postives = 307/414 (74.15%), Query Frame = 0


Query: 32  YLHYNHTDRCRNARWTARESFQFMYGRPWQEVLDFYSHAVNGRLSLSSLLGTEICRDHDD 91
           Y+HY+H D C  ARW ARE+F+FMY RPWQ VLDFYS+AV G LS+ SL   +    HDD
Sbjct: 6   YVHYHHADACSKARWNARETFRFMYDRPWQHVLDFYSNAVEGNLSVLSLFQPKKSLVHDD 65

Query: 92  AETPLIYNSAELNRAAVKD-KTGRWARANFKIVLSYHGNSFDGWQKQPGLNTVQGLVERS 151
             T  +   +E   +  KD ++GRW R NFKIVLSY+G SFDGWQKQP L+TVQG+VE+S
Sbjct: 66  GITEEMLLESEPETSTRKDGRSGRWERVNFKIVLSYNGASFDGWQKQPDLHTVQGVVEKS 125

Query: 152 LGKFVDEKKAQMLKDKCLPLEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSIN 211
           LG FVDE+KAQ+LK KC PLEG  +VAGRTDKGV+AL QVCSFYTWR D++P  IED+IN
Sbjct: 126 LGGFVDERKAQLLKKKCKPLEGRVLVAGRTDKGVSALNQVCSFYTWRKDIEPIAIEDAIN 185

Query: 212 SAAPGKLRTLSVSQVSRIFHPNFSAKWRRYLYILPLNDGENMEPDSAIWEDV---ENREE 271
             A GKLR +S+S+VSR FHPNFSAKWRRYLYI PL+D E +       E+    EN+++
Sbjct: 186 KDASGKLRVVSISKVSRSFHPNFSAKWRRYLYIFPLDDAEPLRKSGENHENFIFDENKKK 245

Query: 272 ENCVKIEALNGEKCVDGIHDNLVLSPNDDELVSADKPQTFSIRRVNQLLRKLEGKLLSYK 331
           +    +     E+ +    D L +    + L   +KP  FS+ +V+QLL+ L+GK+LSYK
Sbjct: 246 QRNGLLSEEIAEEVIMSEDDELEIEETSNALEVVEKPSDFSVSKVDQLLQHLQGKVLSYK 305

Query: 332 MFARDTKASRNEGPPTECFVYHARAAETRLPCLEQGVGRSVMCVELVANRFLRKMVRVLV 391
           MFARDTKA+RNEGPPTECF+YHARAAE RL   +   GR VMCVELVANRFLRKMVRVLV
Sbjct: 306 MFARDTKAARNEGPPTECFMYHARAAEIRLSSSDCVEGRRVMCVELVANRFLRKMVRVLV 365

Query: 392 ATAIREAAAGAGEDALLELMVATCRRATAPPAPPDGLSLVDVGYTEFDSQICFI 442
           AT+IREAAAGA +DALL+L+ A+CRRATAPPAP +GL L DVGYT+FD Q   I
Sbjct: 366 ATSIREAAAGAEDDALLKLLEASCRRATAPPAPSEGLCLFDVGYTDFDPQTSLI 419

[Close]

BLAST of Pay0018469 vs. TAIR 10
Match: AT5G35400.2 (Pseudouridine synthase family protein )

HSP 1 Score: 476.5 bits (1225), Expect = 2.4e-134
Identity = 254/468 (54.27%), Postives = 309/468 (66.03%), Query Frame = 0


Query: 32  YLHYNHTDRCRNARWTARESFQFMYGRPWQEVLDFYSHAVNGRLSLSSLLGTEICRDHDD 91
           Y+HY+H D C  ARW ARE+F+FMY RPWQ VLDFYS+AV G LS+ SL   +    HDD
Sbjct: 6   YVHYHHADACSKARWNARETFRFMYDRPWQHVLDFYSNAVEGNLSVLSLFQPKKSLVHDD 65

Query: 92  AETPLIYNSAELNRAAVKD-KTGRWARANFKIVLSYHGNSFDGWQKQPGLNTVQGLVERS 151
             T  +   +E   +  KD ++GRW R NFKIVLSY+G SFDGWQKQP L+TVQG+VE+S
Sbjct: 66  GITEEMLLESEPETSTRKDGRSGRWERVNFKIVLSYNGASFDGWQKQPDLHTVQGVVEKS 125

Query: 152 LGKFVDEKKAQMLKDKCLPLEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSIN 211
           LG FVDE+KAQ+LK KC PLEG  +VAGRTDKGV+AL QVCSFYTWR D++P  IED+IN
Sbjct: 126 LGGFVDERKAQLLKKKCKPLEGRVLVAGRTDKGVSALNQVCSFYTWRKDIEPIAIEDAIN 185

Query: 212 SAAPGKLRTLSVSQVSRIFHPNFSAKWRRYLYILPLNDGENMEPDSAIWEDV---ENREE 271
             A GKLR +S+S+VSR FHPNFSAKWRRYLYI PL+D E +       E+    EN+++
Sbjct: 186 KDASGKLRVVSISKVSRSFHPNFSAKWRRYLYIFPLDDAEPLRKSGENHENFIFDENKKK 245

Query: 272 ENCVKIEALNGEKCVDGIHDNLVLSPNDDELVSADKPQTFSIRRVNQLLRKLEGKLLSYK 331
           +    +     E+ +    D L +    + L   +KP  FS+ +V+QLL+ L+GK+LSYK
Sbjct: 246 QRNGLLSEEIAEEVIMSEDDELEIEETSNALEVVEKPSDFSVSKVDQLLQHLQGKVLSYK 305

Query: 332 MFARDTKASRNEGPPTECFVYHARAAETRL------------------------------ 391
           MFARDTKA+RNEGPPTECF+YHARAAE RL                              
Sbjct: 306 MFARDTKAARNEGPPTECFMYHARAAEIRLSSSVVHFVAWVFGGSIVLVILATEGSTLDL 365

Query: 392 ------------------------PCLEQGVGRSVMCVELVANRFLRKMVRVLVATAIRE 442
                                    C+E   GR VMCVELVANRFLRKMVRVLVAT+IRE
Sbjct: 366 TDTKLYIASWFLIKRSCEFLFIASDCVE---GRRVMCVELVANRFLRKMVRVLVATSIRE 425

[Close]

BLAST of Pay0018469 vs. TAIR 10
Match: AT3G06950.1 (Pseudouridine synthase family protein )

HSP 1 Score: 62.4 bits (150), Expect = 1.1e-09
Identity = 44/149 (29.53%), Postives = 66/149 (44.30%), Query Frame = 0


Query: 94  TPLIYNSAELNRAAVKDKTGRWARANFKIVLSYHGNSFDGWQKQPGLNTVQGLVERSLGK 153
           +P   +   LN +     +G +    +++V++Y G  F GWQ Q    T+Q ++E++L +
Sbjct: 20  SPQNISMTNLNSSVKVSDSGAY---KWRLVIAYDGTRFAGWQYQESPPTIQSMLEKALIQ 79

Query: 154 FVDEKKAQMLKDKCLPLEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAA 213
             +      L  K L L G    AGRTD GV A  QV  F T            ++N   
Sbjct: 80  ITE------LGRKELQLIG----AGRTDAGVHAWGQVAHFVTPFNYTSLDSFHAALNGLL 139

Query: 214 PGKLRTLSVSQVSRIFHPNFSAKWRRYLY 243
           P  +R   +S     FH  FSA  + Y Y
Sbjct: 140 PKDIRVRELSAAVPEFHARFSASSKVYRY 155

[Close]

BLAST of Pay0018469 vs. TAIR 10
Match: AT1G20370.1 (Pseudouridine synthase family protein )

HSP 1 Score: 61.6 bits (148), Expect = 1.8e-09
Identity = 41/136 (30.15%), Postives = 64/136 (47.06%), Query Frame = 0


Query: 114 RWARANFKIVLSYHGNSFDGWQKQPGLNTVQGLVERSL---GKFVDEKKAQMLKDKCLPL 173
           ++ R    IV ++ G  + G QK PG  T++G +E +L   G   D        D+  P 
Sbjct: 54  KYRRRKVAIVFAFCGVGYQGMQKNPGAKTIEGELEEALFHAGAVPD-------ADRNKPR 113

Query: 174 EGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFH 233
                 + RTDKGV+A+ QV S    R  V P    + +NS  P ++R     +V+  F 
Sbjct: 114 NYEWARSARTDKGVSAVGQVVS---GRFYVDPPGFVERLNSKLPDQIRVFGYKRVAPSFS 173

Query: 234 PNFSAKWRRYLYILPL 247
                  RRY+Y++P+
Sbjct: 174 SKKFCDRRRYVYLIPV 179

[Close]

BLAST of Pay0018469 vs. TAIR 10
Match: AT1G76120.1 (Pseudouridine synthase family protein )

HSP 1 Score: 58.9 bits (141), Expect = 1.2e-08
Identity = 39/125 (31.20%), Postives = 59/125 (47.20%), Query Frame = 0


Query: 122 IVLSYHGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCAVVAGRTD 181
           I+ ++ G  + G QK PG  T++G +E +L       ++   K K       A    RTD
Sbjct: 26  IIFAFCGVGYQGMQKNPGAKTIEGELEEALFHAGAVPESIRGKPKLYDFARSA----RTD 85

Query: 182 KGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRYL 241
           KGV+A+ QV S    R  V P    + +NS  P ++R      V+  F        RRY+
Sbjct: 86  KGVSAVGQVVS---GRFIVDPLGFVNRLNSNLPNQIRIFGYKHVTPSFSSKKFCDRRRYV 143

Query: 242 YILPL 247
           Y+LP+
Sbjct: 146 YLLPV 143

The following BLAST results are available for this feature:

BLAST of Pay0018469 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B5YDX5	6.9e-14	37.04	tRNA pseudouridine synthase A OS=Dictyoglomus thermophilum (strain ATCC 35947 / ...	[more]
B0SC03	2.6e-13	32.52	tRNA pseudouridine synthase A OS=Leptospira biflexa serovar Patoc (strain Patoc ...	[more]
B0SJC4	2.6e-13	32.52	tRNA pseudouridine synthase A OS=Leptospira biflexa serovar Patoc (strain Patoc ...	[more]
C0QZT8	7.7e-13	35.71	tRNA pseudouridine synthase A OS=Brachyspira hyodysenteriae (strain ATCC 49526 /...	[more]
B8E1G5	2.9e-12	31.52	tRNA pseudouridine synthase A OS=Dictyoglomus turgidum (strain DSM 6724 / Z-1310...	[more]

BLAST of Pay0018469 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UXE7	2.2e-260	100.00	tRNA pseudouridine synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A1S3BWI6	2.2e-260	100.00	tRNA pseudouridine synthase OS=Cucumis melo OX=3656 GN=LOC103494203 PE=3 SV=1	[more]
A0A0A0LV59	1.3e-249	96.17	tRNA pseudouridine synthase OS=Cucumis sativus OX=3659 GN=Csa_1G025830 PE=3 SV=1	[more]
A0A6J1C0W1	5.0e-217	86.58	tRNA pseudouridine synthase OS=Momordica charantia OX=3673 GN=LOC111007251 PE=3 ...	[more]
A0A6J1EZC2	3.3e-216	85.68	tRNA pseudouridine synthase OS=Cucurbita moschata OX=3662 GN=LOC111440432 PE=3 S...	[more]

BLAST of Pay0018469 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453520.1	4.5e-260	100.00	PREDICTED: tRNA pseudouridine synthase A [Cucumis melo] >KAA0058161.1 tRNA pseud...	[more]
XP_004137363.1	2.7e-249	96.17	uncharacterized protein LOC101205562 [Cucumis sativus] >KGN63901.1 hypothetical ...	[more]
XP_038878348.1	2.4e-237	91.46	tRNA pseudouridine synthase A [Benincasa hispida]	[more]
XP_022135239.1	1.0e-216	86.58	uncharacterized protein LOC111007251 isoform X1 [Momordica charantia]	[more]
XP_023531012.1	1.4e-216	85.43	uncharacterized protein LOC111793396 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Pay0018469 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35400.1	7.6e-141	60.87	Pseudouridine synthase family protein	[more]
AT5G35400.2	2.4e-134	54.27	Pseudouridine synthase family protein	[more]
AT3G06950.1	1.1e-09	29.53	Pseudouridine synthase family protein	[more]
AT1G20370.1	1.8e-09	30.15	Pseudouridine synthase family protein	[more]
AT1G76120.1	1.2e-08	31.20	Pseudouridine synthase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020097	Pseudouridine synthase I, TruA, alpha/beta domain	PFAM	PF01416	PseudoU_synth_1	coord: 336..431 e-value: 5.1E-6 score: 26.9
IPR020095	Pseudouridine synthase I, TruA, C-terminal	GENE3D	3.30.70.660		coord: 289..429 e-value: 4.4E-14 score: 54.4
IPR020094	Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal	GENE3D	3.30.70.580		coord: 116..235 e-value: 6.0E-24 score: 86.3
IPR001406	Pseudouridine synthase I, TruA	PANTHER	PTHR11142	PSEUDOURIDYLATE SYNTHASE	coord: 40..441
None	No IPR available	PANTHER	PTHR11142:SF10	TRNA PSEUDOURIDINE SYNTHASE	coord: 40..441
IPR020103	Pseudouridine synthase, catalytic domain superfamily	SUPERFAMILY	55120	Pseudouridine synthase	coord: 118..438

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0018469.4	Pay0018469.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031119	tRNA pseudouridine synthesis
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0009451	RNA modification
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0106029	tRNA pseudouridine synthase activity
molecular_function	GO:0009982	pseudouridine synthase activity