Pay0018336 (gene) Melon (Payzawat) v1

Overview


Name	Pay0018336
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr05: 337152 .. 338737 (+)
RNA-Seq Expression	Pay0018336
Synteny	Pay0018336

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCGACACGATTTGAAGTGTCTAAGTTTAATGGACATGGAGATTTCGCTCTTTGGAGAAAAAAGATTAGAGCTATTTTGGTTCAACATAAAGTAGCAAAGATCTTAGATGAAGAGAGACTTCCAGATAATATTACAGAAAGTGAAAAAAGAGATATGGATGAAATGGCCTATTGGACTATTCTTCTGTATCTGTCAGATGAAGTTCTTAGGCTAGTGGATGAGGCTACTACTACAGGGGAGTTGTGGAAAAAGCTAGAGAGCCTTTATTTGACAAAGTCATTGCCAAATAAAATATATATAAAGGAGAAGTTCTTTGGATATAAAATGGACCAAAGTAAAATTTTAGAAGAGAATCTGGATGAATTTCAGAAGATTGTAGTTGATCTCAATAACATCGGTGAGAAGATGTCGGATGAGAATCAAGCAGTGATTCTTTTAAATTCACTACCAGAAACATATCGAGAGGTTAAGGCTGCTATTAAATATGGTCGGGACTCATTGACCATGAGTATAGTGTTGGATGCCTTGAAAACTAGAAATCTCGAGATCAAGAAAGAACGCAAAGATGGCAGTTACTCATGGCCAGAGGGAGGAGTGAGAAAAAGAGCTGGAAAGGTAAAGAGAGGATTTTCAGGTCGAAATCCAAGGGGAAATCTAGAAAGTGTTTCCTTTGTCATAAAGAAGGACACTTTAAGAAAAATTGCCCTTTGAATAAGAGCAGAGAAGCATCAACCAGTGAAGCGAATGTTACTGATGGGTATAATTCAGCAGAGATCACTGATGGGTGTGATTCAGCAGAGACTGGGTATGAGTCTGCAGAGGTCTTGATGGTGTCTCACAGAGATATACAGGATGCTTGGATCATGGATTCAGGGTGTACTTTTCATATGACCCCTCATCGGGATTTTCTGACAAACTTTCAGAAAGTTGATGGGGGAAAGGTCTTATTGGGTGACAATGGTACATGCGATGTAAAAGGAACTGGTTCAGTGCAAATTGCAACACATGATGGGATGGTAAGAATACTTACCAATGTGCGGTATGTTCCAAAACTTAAACGTAATCTAATATCTCTTGGGGAATTAGATAGATCAGGTTGTACCATAAAATCTGAAAATGGAGTTATGAAAGTTACCAAAGGTTCTCTAGTTAAACTGAGGGGAACTTTAAGACATGGTCTATATGTGTTGGAAGGTACCACAGTTTCAGATAGTGCTGCTATTGCGTCTGGTAAAGTTACAGATATGTCTATGTTATGGCATAAAAGGCTAGCTCATGTGAGTGAAAGAGGCTTACAAGCTCTATCCCAACAAGGTTTGCTAGGAGGAGTTAAGAATGTTGAACTCCCATTTTGTGAACATTGTATAATGGGAAAGTCTACCAGAGTAAAGTTTGGGAAAGGGAAGCACACGACCAAAGGTATTTTGGATTATATTCACTCAGATTTGTGGGGTCCTACGAAAGAGGTCTCTATGGGAGGTTCGAGATACTTTATCTCTATCATTGATGATTTCTCAAGAAAAGTATGGATTTATCCATTGAAACAAAAGGATAAAGCTTTTGGAAAATTTCTTGAATAG

mRNA sequence

ATGGCTTCGACACGATTTGAAGTGTCTAAGTTTAATGGACATGGAGATTTCGCTCTTTGGAGAAAAAAGATTAGAGCTATTTTGGTTCAACATAAAGTAGCAAAGATCTTAGATGAAGAGAGACTTCCAGATAATATTACAGAAAGTGAAAAAAGAGATATGGATGAAATGGCCTATTGGACTATTCTTCTGTATCTGTCAGATGAAGTTCTTAGGCTAGTGGATGAGGCTACTACTACAGGGGAGTTGTGGAAAAAGCTAGAGAGCCTTTATTTGACAAAGTCATTGCCAAATAAAATATATATAAAGGAGAAGTTCTTTGGATATAAAATGGACCAAAGTAAAATTTTAGAAGAGAATCTGGATGAATTTCAGAAGATTGTAGTTGATCTCAATAACATCGGTGAGAAGATGTCGGATGAGAATCAAGCAGTGATTCTTTTAAATTCACTACCAGAAACATATCGAGAGGTTAAGGCTGCTATTAAATATGGTCGGGACTCATTGACCATGAGTATAGTGTTGGATGCCTTGAAAACTAGAAATCTCGAGATCAAGAAAGAACGCAAAGATGGCAAGAGGATTTTCAGGTCGAAATCCAAGGGGAAATCTAGAAAGTGTTTCCTTTGTCATAAAGAAGGACACTTTAAGAAAAATTGCCCTTTGAATAAGAGCAGAGAAGCATCAACCAGTGAAGCGAATGTTACTGATGGGTATAATTCAGCAGAGATCACTGATGGGTGTGATTCAGCAGAGACTGGGTATGAGTCTGCAGAGGTCTTGATGGTGTCTCACAGAGATATACAGGATGCTTGGATCATGGATTCAGGGTGTACTTTTCATATGACCCCTCATCGGGATTTTCTGACAAACTTTCAGAAAGTTGATGGGGGAAAGGTCTTATTGGGTGACAATGGTACATGCGATGTAAAAGGAACTGGTTCAGTGCAAATTGCAACACATGATGGGATGGTAAGAATACTTACCAATGTGCGGTATGTTCCAAAACTTAAACGTAATCTAATATCTCTTGGGGAATTAGATAGATCAGGTTGTACCATAAAATCTGAAAATGGAGTTATGAAAGTTACCAAAGGTTCTCTAGTTAAACTGAGGGGAACTTTAAGACATGGTCTATATGTGTTGGAAGGTACCACAGTTTCAGATAGTGCTGCTATTGCGTCTGGTAAAGTTACAGATATGTCTATGTTATGGCATAAAAGGCTAGCTCATGTGAGTGAAAGAGGCTTACAAGCTCTATCCCAACAAGGTTTGCTAGGAGGAGTTAAGAATGTTGAACTCCCATTTTGTGAACATTGTATAATGGGAAAGTCTACCAGAGTAAAGTTTGGGAAAGGGAAGCACACGACCAAAGGTATTTTGGATTATATTCACTCAGATTTGTGGGGTCCTACGAAAGAGGTCTCTATGGGAGGTTCGAGATACTTTATCTCTATCATTGATGATTTCTCAAGAAAAGTATGGATTTATCCATTGAAACAAAAGGATAAAGCTTTTGGAAAATTTCTTGAATAG

Coding sequence (CDS)

ATGGCTTCGACACGATTTGAAGTGTCTAAGTTTAATGGACATGGAGATTTCGCTCTTTGGAGAAAAAAGATTAGAGCTATTTTGGTTCAACATAAAGTAGCAAAGATCTTAGATGAAGAGAGACTTCCAGATAATATTACAGAAAGTGAAAAAAGAGATATGGATGAAATGGCCTATTGGACTATTCTTCTGTATCTGTCAGATGAAGTTCTTAGGCTAGTGGATGAGGCTACTACTACAGGGGAGTTGTGGAAAAAGCTAGAGAGCCTTTATTTGACAAAGTCATTGCCAAATAAAATATATATAAAGGAGAAGTTCTTTGGATATAAAATGGACCAAAGTAAAATTTTAGAAGAGAATCTGGATGAATTTCAGAAGATTGTAGTTGATCTCAATAACATCGGTGAGAAGATGTCGGATGAGAATCAAGCAGTGATTCTTTTAAATTCACTACCAGAAACATATCGAGAGGTTAAGGCTGCTATTAAATATGGTCGGGACTCATTGACCATGAGTATAGTGTTGGATGCCTTGAAAACTAGAAATCTCGAGATCAAGAAAGAACGCAAAGATGGCAAGAGGATTTTCAGGTCGAAATCCAAGGGGAAATCTAGAAAGTGTTTCCTTTGTCATAAAGAAGGACACTTTAAGAAAAATTGCCCTTTGAATAAGAGCAGAGAAGCATCAACCAGTGAAGCGAATGTTACTGATGGGTATAATTCAGCAGAGATCACTGATGGGTGTGATTCAGCAGAGACTGGGTATGAGTCTGCAGAGGTCTTGATGGTGTCTCACAGAGATATACAGGATGCTTGGATCATGGATTCAGGGTGTACTTTTCATATGACCCCTCATCGGGATTTTCTGACAAACTTTCAGAAAGTTGATGGGGGAAAGGTCTTATTGGGTGACAATGGTACATGCGATGTAAAAGGAACTGGTTCAGTGCAAATTGCAACACATGATGGGATGGTAAGAATACTTACCAATGTGCGGTATGTTCCAAAACTTAAACGTAATCTAATATCTCTTGGGGAATTAGATAGATCAGGTTGTACCATAAAATCTGAAAATGGAGTTATGAAAGTTACCAAAGGTTCTCTAGTTAAACTGAGGGGAACTTTAAGACATGGTCTATATGTGTTGGAAGGTACCACAGTTTCAGATAGTGCTGCTATTGCGTCTGGTAAAGTTACAGATATGTCTATGTTATGGCATAAAAGGCTAGCTCATGTGAGTGAAAGAGGCTTACAAGCTCTATCCCAACAAGGTTTGCTAGGAGGAGTTAAGAATGTTGAACTCCCATTTTGTGAACATTGTATAATGGGAAAGTCTACCAGAGTAAAGTTTGGGAAAGGGAAGCACACGACCAAAGGTATTTTGGATTATATTCACTCAGATTTGTGGGGTCCTACGAAAGAGGTCTCTATGGGAGGTTCGAGATACTTTATCTCTATCATTGATGATTTCTCAAGAAAAGTATGGATTTATCCATTGAAACAAAAGGATAAAGCTTTTGGAAAATTTCTTGAATAG

Protein sequence

MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYWTILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGKRIFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSDSAAIASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDYIHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDKAFGKFLE

Homology

[Close]

BLAST of Pay0018336 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 4.8e-83
Identity = 179/540 (33.15%), Postives = 293/540 (54.26%), Query Frame = 0


Query: 1   MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILD-EERLPDNITESEKRDMDEMAY 60
           M+  ++EV+KFNG   F+ W++++R +L+Q  + K+LD + + PD +   +  D+DE A 
Sbjct: 1   MSGVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAA 60

Query: 61  WTILLYLSDEVL-RLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILE 120
             I L+LSD+V+  ++DE T  G +W +LESLY++K+L NK+Y+K++ +   M +     
Sbjct: 61  SAIRLHLSDDVVNNIIDEDTARG-IWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFL 120

Query: 121 ENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDAL 180
            +L+ F  ++  L N+G K+ +E++A++LLNSLP +Y  +   I +G+ ++ +  V  AL
Sbjct: 121 SHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSAL 180

Query: 181 KTRNLEIKKERKDGKRIF------------------------RSKSKGKSRKCFLCHKEG 240
                  KK    G+ +                         +++SK + R C+ C++ G
Sbjct: 181 LLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQPG 240

Query: 241 HFKKNCPLNKSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIM 300
           HFK++CP  +  +  TS     D  N+A +    D+        E  M      +  W++
Sbjct: 241 HFKRDCPNPRKGKGETSGQKNDD--NTAAMVQNNDNVVLFINEEEECM-HLSGPESEWVV 300

Query: 301 DSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYV 360
           D+  + H TP RD    +   D G V +G+     + G G + I T+ G   +L +VR+V
Sbjct: 301 DTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHV 360

Query: 361 PKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSDSAAIA 420
           P L+ NLIS   LDR G      N   ++TKGSLV  +G  R       GT    +A I 
Sbjct: 361 PDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVAR-------GTLYRTNAEIC 420

Query: 421 SGKVT----DMSM-LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVK 480
            G++     ++S+ LWHKR+ H+SE+GLQ L+++ L+   K   +  C++C+ GK  RV 
Sbjct: 421 QGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVS 480

Query: 481 FGKGKHTTKGILDYIHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDKAFGKF 510
           F         ILD ++SD+ GP +  SMGG++YF++ IDD SRK+W+Y LK KD+ F  F
Sbjct: 481 FQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVF 529

[Close]

BLAST of Pay0018336 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 151.0 bits (380), Expect = 3.7e-35
Identity = 135/561 (24.06%), Postives = 247/561 (44.03%), Query Frame = 0


Query: 1   MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW 60
           M   +  +  F+G   +A+W+ +IRA+L +  V K++D   +P+ + +S K+  +  A  
Sbjct: 1   MDKAKRNIKPFDGE-KYAIWKFRIRALLAEQDVLKVVD-GLMPNEVDDSWKK-AERCAKS 60

Query: 61  TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN 120
           TI+ YLSD  L       T  ++ + L+++Y  KSL +++ ++++    K+     L  +
Sbjct: 61  TIIEYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSH 120

Query: 121 LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIK-YGRDSLTMSIVLDALK 180
              F +++ +L   G K+ + ++   LL +LP  Y  +  AI+    ++LT++ V + L 
Sbjct: 121 FHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSEENLTLAFVKNRLL 180

Query: 181 TRNLEIKKERKD----------------------------GKRIFRSKSKGKSRKCFLCH 240
            + ++IK +  D                             K+IF+  SK K  KC  C 
Sbjct: 181 DQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNLFKNRVTKPKKIFKGNSKYKV-KCHHCG 240

Query: 241 KEGHFKKNC-----PLNKSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHR 300
           +EGH KK+C      LN   + +  +      +  A +               V  V++ 
Sbjct: 241 REGHIKKDCFHYKRILNNKNKENEKQVQTATSHGIAFM---------------VKEVNNT 300

Query: 301 DIQD--AWIMDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGM 360
            + D   +++DSG + H+       T+  +V     +        V   G    AT  G+
Sbjct: 301 SVMDNCGFVLDSGASDHLINDESLYTDSVEVVPPLKIA-------VAKQGEFIYATKRGI 360

Query: 361 VRI-------LTNVRYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSL--VKLRGTL 420
           VR+       L +V +  +   NL+S+  L  +G +I+ +   + ++K  L  VK  G L
Sbjct: 361 VRLRNDHEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSGML 420

Query: 421 RHGLYVLEGTTVSDSAAIASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGG---VKNV 480
            +         ++  A   + K  +   LWH+R  H+S+  L  + ++ +      + N+
Sbjct: 421 NN------VPVINFQAYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNL 480

Query: 481 EL--PFCEHCIMGKSTRVKFGKGKHTT--KGILDYIHSDLWGPTKEVSMGGSRYFISIID 510
           EL    CE C+ GK  R+ F + K  T  K  L  +HSD+ GP   V++    YF+  +D
Sbjct: 481 ELSCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVD 529

[Close]

BLAST of Pay0018336 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.2e-30
Identity = 137/542 (25.28%), Postives = 232/542 (42.80%), Query Frame = 0


Query: 16  DFALWRKKIRAILVQHKVAKILD-----------EERLPD-NITESEKRDMDEMAYWTIL 75
           ++ +W +++ A+   +++A  LD            + +P  N   +  R  D++ Y  IL
Sbjct: 30  NYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVNPDYTRWRRQDKLIYSAIL 89

Query: 76  LYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIK-------EKFFGYKMDQSKI 135
             +S  V   V  ATT  ++W+ L  +Y   S  +   ++           G  MD  + 
Sbjct: 90  GAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRFITRFDQLALLGKPMDHDEQ 149

Query: 136 LE---ENLDEFQKIVVD----------LNNIGEKMSDENQAVILLNSLPETYREVKAAIK 195
           +E   ENL +  K V+D          L  I E++ +    ++ LNS       + A + 
Sbjct: 150 VERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLINRESKLLALNSAEVV--PITANVV 209

Query: 196 YGRDSLTMSIVLDALKTRNLEIKKERKDGKRIFRSKSKGKSR-------KCFLCHKEGHF 255
             R++ T     +    RN      R +  +   S S+  +R       +C +C  +GH 
Sbjct: 210 THRNTNTNRNQNNRGDNRNYNNNNNRSNSWQPSSSGSRSDNRQPKPYLGRCQICSVQGHS 269

Query: 256 KKNCPLNKSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDS 315
            K CP     +++T++   T  +             T ++    L V+     + W++DS
Sbjct: 270 AKRCPQLHQFQSTTNQQQSTSPF-------------TPWQPRANLAVNSPYNANNWLLDS 329

Query: 316 GCTFHMTPHRDFLTNFQKVDGG-KVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVP 375
           G T H+T   + L+  Q   GG  V++ D  T  +  TGS  + T    +  L  V YVP
Sbjct: 330 GATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLD-LNKVLYVP 389

Query: 376 KLKRNLISLGEL---DRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLY---VLEGTTVSD 435
            + +NLIS+  L   +R        +  +K     +  L+G  +  LY   +     VS 
Sbjct: 390 NIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSM 449

Query: 436 SAAIASGKVTDMSMLWHKRLAHVSERGLQA-LSQQGLLGGVKNVELPFCEHCIMGKSTRV 495
            A+  S K T  S  WH RL H S   L + +S   L     + +L  C  C + KS +V
Sbjct: 450 FASPCS-KATHSS--WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKV 509

Query: 496 KFGKGKHTTKGILDYIHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDKAFGK 511
            F     T+   L+YI+SD+W  +  +S+   RY++  +D F+R  W+YPLKQK +    
Sbjct: 510 PFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDT 551

[Close]

BLAST of Pay0018336 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 2.4e-26
Identity = 127/560 (22.68%), Postives = 229/560 (40.89%), Query Frame = 0


Query: 16  DFALWRKKIRAILVQHKVAKILD-EERLPD-----------NITESEKRDMDEMAYWTIL 75
           ++ +W +++ A+   +++A  LD    +P            N   +  +  D++ Y  +L
Sbjct: 30  NYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQDKLIYSAVL 89

Query: 76  LYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEENLDE 135
             +S  V   V  ATT  ++W+ L  +Y   S  +   ++ +   +    +K +++ +  
Sbjct: 90  GAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKG-TKTIDDYMQG 149

Query: 136 FQKIVVDLNNIGEKMSDENQAVILLNSLPETYREV--KAAIKYGRDSLT----------- 195
                  L  +G+ M  + Q   +L +LPE Y+ V  + A K    +LT           
Sbjct: 150 LVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERLLNHES 209

Query: 196 ----------MSIVLDALKTRNLEIKKERKDGKRIFR----------------------- 255
                     + I  +A+  RN        +G R  R                       
Sbjct: 210 KILAVSSATVIPITANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPN 269

Query: 256 -SKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGCDSAETGYE 315
            ++SK    KC +C  +GH  K C             +    + S+  +    S  T ++
Sbjct: 270 NNQSKPYLGKCQICGVQGHSAKRC-------------SQLQHFLSSVNSQQPPSPFTPWQ 329

Query: 316 SAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQKVDGG-KVLLGDNGTCDVKGTGS 375
               L +      + W++DSG T H+T   + L+  Q   GG  V++ D  T  +  TGS
Sbjct: 330 PRANLALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGS 389

Query: 376 VQIATHDGMVRILTNVRYVPKLKRNLISLGEL-DRSGCTIK--SENGVMKVTKGSLVKLR 435
             ++T    +  L N+ YVP + +NLIS+  L + +G +++    +  +K     +  L+
Sbjct: 390 TSLSTKSRPLN-LHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQ 449

Query: 436 GTLRHGLYVLEGTTVSDSAAIASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNV 495
           G  +  LY     +    +  AS         WH RL H +   L ++     L  V N 
Sbjct: 450 GKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSL-SVLNP 509

Query: 496 ELPF--CEHCIMGKSTRVKFGKGKHTTKGILDYIHSDLWGPTKEVSMGGSRYFISIIDDF 511
              F  C  C++ KS +V F +    +   L+YI+SD+W  +  +S    RY++  +D F
Sbjct: 510 SHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHF 569

[Close]

BLAST of Pay0018336 vs. ExPASy Swiss-Prot
Match: P93293 (Uncharacterized mitochondrial protein AtMg00300 OS=Arabidopsis thaliana OX=3702 GN=AtMg00300 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.1e-23
Identity = 53/112 (47.32%), Postives = 71/112 (63.39%), Query Frame = 0


Query: 359 GVMKVTKGSLVKLRGTLRHGLYVLEGTTVSDSAAIASGKVTDMSMLWHKRLAHVSERGLQ 418
           GV+KV KG    L+G     LY+L+G+  +  + +A     D + LWH RLAH+S+RG++
Sbjct: 27  GVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLAE-TAKDETRLWHSRLAHMSQRGME 86

Query: 419 ALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDYIHSDLWG 471
            L ++G L   K   L FCE CI GK+ RV F  G+HTTK  LDY+HSDLWG
Sbjct: 87  LLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWG 137

[Close]

BLAST of Pay0018336 vs. ExPASy TrEMBL
Match: A0A5A7U2U7 (Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00590 PE=4 SV=1)

HSP 1 Score: 1000.3 bits (2585), Expect = 2.8e-288
Identity = 505/528 (95.64%), Postives = 508/528 (96.21%), Query Frame = 0


Query: 1   MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW 60
           MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW
Sbjct: 1   MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW 60

Query: 61  TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN 120
           TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN
Sbjct: 61  TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN 120

Query: 121 LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
           LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYG DSLTMSIVLDALKT
Sbjct: 121 LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKT 180

Query: 181 RNLEIKKERKDG-----------------KRIFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
           RNLEIKKERKDG                 +R FRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181 RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241 KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300
           KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT
Sbjct: 241 KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301 PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
           PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301 PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361 LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSDSAAIASGKVTDMSM 420
           LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVS SAAIASGKVT+MSM
Sbjct: 361 LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTNMSM 420

Query: 421 LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
           LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421 LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481 IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDKAFGKFLE 512
           IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKD+AFGKFLE
Sbjct: 481 IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLE 528

[Close]

BLAST of Pay0018336 vs. ExPASy TrEMBL
Match: A0A5D3DNU1 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004440 PE=4 SV=1)

HSP 1 Score: 993.0 bits (2566), Expect = 4.5e-286
Identity = 503/528 (95.27%), Postives = 506/528 (95.83%), Query Frame = 0


Query: 1   MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW 60
           MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAY 
Sbjct: 1   MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60

Query: 61  TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN 120
           TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSK LEEN
Sbjct: 61  TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120

Query: 121 LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
           LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT
Sbjct: 121 LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180

Query: 181 RNLEIKKERKDG-----------------KRIFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
           RNLEIKKERKDG                 +R FRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181 RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241 KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300
           KSREASTSEANVTDGYNSAEITDG DSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT
Sbjct: 241 KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301 PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
           PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301 PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361 LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSDSAAIASGKVTDMSM 420
           LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVS SAAIASGKVTDMSM
Sbjct: 361 LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420

Query: 421 LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
           LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421 LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481 IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDKAFGKFLE 512
           +HSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKD+AFGKFLE
Sbjct: 481 VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLE 528

[Close]

BLAST of Pay0018336 vs. ExPASy TrEMBL
Match: A0A5A7UB25 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold560G00190 PE=4 SV=1)

HSP 1 Score: 988.0 bits (2553), Expect = 1.4e-284
Identity = 501/528 (94.89%), Postives = 505/528 (95.64%), Query Frame = 0


Query: 1   MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW 60
           MASTRFEVSKFNGHGDF+LWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAY 
Sbjct: 1   MASTRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60

Query: 61  TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN 120
           TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSL NKIYIKEKFFGYKMDQSK LEEN
Sbjct: 61  TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEEN 120

Query: 121 LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
           LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT
Sbjct: 121 LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180

Query: 181 RNLEIKKERKDG-----------------KRIFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
           RNLEIKKERKDG                 +R FRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181 RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241 KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300
           KSREASTSEANVTDGYNSAEITDG DSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT
Sbjct: 241 KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301 PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
           PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301 PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361 LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSDSAAIASGKVTDMSM 420
           LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVS SAAIASGKVTDMSM
Sbjct: 361 LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420

Query: 421 LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
           LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421 LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481 IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDKAFGKFLE 512
           +HSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKD+AFGKFLE
Sbjct: 481 VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLE 528

[Close]

BLAST of Pay0018336 vs. ExPASy TrEMBL
Match: A0A5A7VKC2 (Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174G00310 PE=4 SV=1)

HSP 1 Score: 899.0 bits (2322), Expect = 8.8e-258
Identity = 465/528 (88.07%), Postives = 476/528 (90.15%), Query Frame = 0


Query: 1   MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW 60
           MASTRFE+SKFNG+GDFA+WRKKIR ILVQHKVAKILDEE+LP+NITESEKRDMDEM Y 
Sbjct: 1   MASTRFEMSKFNGNGDFAIWRKKIRVILVQHKVAKILDEEKLPENITESEKRDMDEMTYS 60

Query: 61  TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN 120
           TILLYLSDEVLRLVDEATTTGELWKKLESLYLTK LPN    KEKFF YKMDQSK LEEN
Sbjct: 61  TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKFLPN----KEKFFRYKMDQSKSLEEN 120

Query: 121 LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
           LDEFQKI+VDL+NIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT
Sbjct: 121 LDEFQKIIVDLSNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180

Query: 181 RNLEIKKERKDG-----------------KRIFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
           RNLEIKKERKDG                 +R  RSKSKGKSRKCFLCHK GHFKKNCPLN
Sbjct: 181 RNLEIKKERKDGELLMARGRSEKKSWKGKERSSRSKSKGKSRKCFLCHK-GHFKKNCPLN 240

Query: 241 KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300
           KSREASTSEANVTDGYN AEITD       GYESAEVLMVSHRDIQDAWIMDSGCTFHMT
Sbjct: 241 KSREASTSEANVTDGYNFAEITD-------GYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301 PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
           PHRDFLTNFQK DGGKVLLGDNG CDVK TGSVQIATHD MVRILTNVRYVPKLKRNLIS
Sbjct: 301 PHRDFLTNFQKGDGGKVLLGDNGICDVKRTGSVQIATHDEMVRILTNVRYVPKLKRNLIS 360

Query: 361 LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSDSAAIASGKVTDMSM 420
           LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVS S AIASGKVT M M
Sbjct: 361 LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSTAIASGKVTYMFM 420

Query: 421 LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
           LWH RLAHVSERGLQALSQQGLL GVKNVEL FCEHCIMGK TRV+FGKGKHTTKGILDY
Sbjct: 421 LWHNRLAHVSERGLQALSQQGLLEGVKNVELSFCEHCIMGKCTRVQFGKGKHTTKGILDY 480

Query: 481 IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDKAFGKFLE 512
           +HSDLWGPTKE  MGGSRYFISIIDDFSRKVWIYPLKQKD+AFGKFLE
Sbjct: 481 VHSDLWGPTKEAFMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLE 516

[Close]

BLAST of Pay0018336 vs. ExPASy TrEMBL
Match: A0A5D3CFX6 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00490 PE=4 SV=1)

HSP 1 Score: 789.6 bits (2038), Expect = 7.6e-225
Identity = 411/475 (86.53%), Postives = 416/475 (87.58%), Query Frame = 0


Query: 54  MDEMAYWTILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQ 113
           MDEMAY TILLYLSDEVLRL DE TTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQ
Sbjct: 1   MDEMAYSTILLYLSDEVLRLGDEVTTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQ 60

Query: 114 SKILEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSI 173
           SK LEENL EFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSI
Sbjct: 61  SKSLEENLGEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSI 120

Query: 174 VLDALKTRNLEIKKERKDG-----------------KRIFRSKSKGKSRKCFLCHKEGHF 233
           VLDALKTRNLEIKKERKDG                 +R FRSKSK KSRKCFLCHKEGHF
Sbjct: 121 VLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERNFRSKSKEKSRKCFLCHKEGHF 180

Query: 234 KKNCPLNKSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDS 293
           KKNCPLNKSREASTSEANVTDGYNSAEITDG DSA+TGYESAEVLMVSHRDIQDAWIMD 
Sbjct: 181 KKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAKTGYESAEVLMVSHRDIQDAWIMDL 240

Query: 294 GCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPK 353
           GCTFHMT H+DFLTNFQK DGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPK
Sbjct: 241 GCTFHMTHHQDFLTNFQKGDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPK 300

Query: 354 LKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSDSAAIASG 413
           LKRNLISLGELDRSGCTIKSENGVMKVTKGS VKLRGTLRHGLYVLEGTTVS SAAIAS 
Sbjct: 301 LKRNLISLGELDRSGCTIKSENGVMKVTKGSSVKLRGTLRHGLYVLEGTTVSGSAAIAS- 360

Query: 414 KVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHT 473
                                      GLLGGVKNVELPFCEHCIM KSTRVKFGKGKHT
Sbjct: 361 ---------------------------GLLGGVKNVELPFCEHCIMEKSTRVKFGKGKHT 420

Query: 474 TKGILDYIHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDKAFGKFLE 512
           TKGILDY+HSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKD+AFGKFLE
Sbjct: 421 TKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLE 447

[Close]

BLAST of Pay0018336 vs. NCBI nr
Match: KAA0047995.1 (retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa])

HSP 1 Score: 1000.3 bits (2585), Expect = 5.8e-288
Identity = 505/528 (95.64%), Postives = 508/528 (96.21%), Query Frame = 0


Query: 1   MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW 60
           MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW
Sbjct: 1   MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW 60

Query: 61  TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN 120
           TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN
Sbjct: 61  TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN 120

Query: 121 LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
           LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYG DSLTMSIVLDALKT
Sbjct: 121 LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKT 180

Query: 181 RNLEIKKERKDG-----------------KRIFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
           RNLEIKKERKDG                 +R FRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181 RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241 KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300
           KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT
Sbjct: 241 KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301 PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
           PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301 PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361 LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSDSAAIASGKVTDMSM 420
           LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVS SAAIASGKVT+MSM
Sbjct: 361 LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTNMSM 420

Query: 421 LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
           LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421 LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481 IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDKAFGKFLE 512
           IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKD+AFGKFLE
Sbjct: 481 IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLE 528

[Close]

BLAST of Pay0018336 vs. NCBI nr
Match: TYK25306.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 993.0 bits (2566), Expect = 9.3e-286
Identity = 503/528 (95.27%), Postives = 506/528 (95.83%), Query Frame = 0


Query: 1   MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW 60
           MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAY 
Sbjct: 1   MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60

Query: 61  TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN 120
           TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSK LEEN
Sbjct: 61  TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120

Query: 121 LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
           LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT
Sbjct: 121 LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180

Query: 181 RNLEIKKERKDG-----------------KRIFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
           RNLEIKKERKDG                 +R FRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181 RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241 KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300
           KSREASTSEANVTDGYNSAEITDG DSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT
Sbjct: 241 KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301 PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
           PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301 PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361 LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSDSAAIASGKVTDMSM 420
           LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVS SAAIASGKVTDMSM
Sbjct: 361 LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420

Query: 421 LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
           LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421 LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481 IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDKAFGKFLE 512
           +HSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKD+AFGKFLE
Sbjct: 481 VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLE 528

[Close]

BLAST of Pay0018336 vs. NCBI nr
Match: KAA0050719.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 988.0 bits (2553), Expect = 3.0e-284
Identity = 501/528 (94.89%), Postives = 505/528 (95.64%), Query Frame = 0


Query: 1   MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW 60
           MASTRFEVSKFNGHGDF+LWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAY 
Sbjct: 1   MASTRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60

Query: 61  TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN 120
           TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSL NKIYIKEKFFGYKMDQSK LEEN
Sbjct: 61  TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEEN 120

Query: 121 LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
           LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT
Sbjct: 121 LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180

Query: 181 RNLEIKKERKDG-----------------KRIFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
           RNLEIKKERKDG                 +R FRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181 RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241 KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300
           KSREASTSEANVTDGYNSAEITDG DSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT
Sbjct: 241 KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301 PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
           PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301 PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361 LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSDSAAIASGKVTDMSM 420
           LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVS SAAIASGKVTDMSM
Sbjct: 361 LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420

Query: 421 LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
           LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421 LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481 IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDKAFGKFLE 512
           +HSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKD+AFGKFLE
Sbjct: 481 VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLE 528

[Close]

BLAST of Pay0018336 vs. NCBI nr
Match: KAA0067607.1 (retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] >TYJ97155.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa])

HSP 1 Score: 899.0 bits (2322), Expect = 1.8e-257
Identity = 465/528 (88.07%), Postives = 476/528 (90.15%), Query Frame = 0


Query: 1   MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW 60
           MASTRFE+SKFNG+GDFA+WRKKIR ILVQHKVAKILDEE+LP+NITESEKRDMDEM Y 
Sbjct: 1   MASTRFEMSKFNGNGDFAIWRKKIRVILVQHKVAKILDEEKLPENITESEKRDMDEMTYS 60

Query: 61  TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN 120
           TILLYLSDEVLRLVDEATTTGELWKKLESLYLTK LPN    KEKFF YKMDQSK LEEN
Sbjct: 61  TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKFLPN----KEKFFRYKMDQSKSLEEN 120

Query: 121 LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180
           LDEFQKI+VDL+NIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT
Sbjct: 121 LDEFQKIIVDLSNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180

Query: 181 RNLEIKKERKDG-----------------KRIFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
           RNLEIKKERKDG                 +R  RSKSKGKSRKCFLCHK GHFKKNCPLN
Sbjct: 181 RNLEIKKERKDGELLMARGRSEKKSWKGKERSSRSKSKGKSRKCFLCHK-GHFKKNCPLN 240

Query: 241 KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300
           KSREASTSEANVTDGYN AEITD       GYESAEVLMVSHRDIQDAWIMDSGCTFHMT
Sbjct: 241 KSREASTSEANVTDGYNFAEITD-------GYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301 PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
           PHRDFLTNFQK DGGKVLLGDNG CDVK TGSVQIATHD MVRILTNVRYVPKLKRNLIS
Sbjct: 301 PHRDFLTNFQKGDGGKVLLGDNGICDVKRTGSVQIATHDEMVRILTNVRYVPKLKRNLIS 360

Query: 361 LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSDSAAIASGKVTDMSM 420
           LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVS S AIASGKVT M M
Sbjct: 361 LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSTAIASGKVTYMFM 420

Query: 421 LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
           LWH RLAHVSERGLQALSQQGLL GVKNVEL FCEHCIMGK TRV+FGKGKHTTKGILDY
Sbjct: 421 LWHNRLAHVSERGLQALSQQGLLEGVKNVELSFCEHCIMGKCTRVQFGKGKHTTKGILDY 480

Query: 481 IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDKAFGKFLE 512
           +HSDLWGPTKE  MGGSRYFISIIDDFSRKVWIYPLKQKD+AFGKFLE
Sbjct: 481 VHSDLWGPTKEAFMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLE 516

[Close]

BLAST of Pay0018336 vs. NCBI nr
Match: TYK10877.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 789.6 bits (2038), Expect = 1.6e-224
Identity = 411/475 (86.53%), Postives = 416/475 (87.58%), Query Frame = 0


Query: 54  MDEMAYWTILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQ 113
           MDEMAY TILLYLSDEVLRL DE TTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQ
Sbjct: 1   MDEMAYSTILLYLSDEVLRLGDEVTTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQ 60

Query: 114 SKILEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSI 173
           SK LEENL EFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSI
Sbjct: 61  SKSLEENLGEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSI 120

Query: 174 VLDALKTRNLEIKKERKDG-----------------KRIFRSKSKGKSRKCFLCHKEGHF 233
           VLDALKTRNLEIKKERKDG                 +R FRSKSK KSRKCFLCHKEGHF
Sbjct: 121 VLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERNFRSKSKEKSRKCFLCHKEGHF 180

Query: 234 KKNCPLNKSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDS 293
           KKNCPLNKSREASTSEANVTDGYNSAEITDG DSA+TGYESAEVLMVSHRDIQDAWIMD 
Sbjct: 181 KKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAKTGYESAEVLMVSHRDIQDAWIMDL 240

Query: 294 GCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPK 353
           GCTFHMT H+DFLTNFQK DGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPK
Sbjct: 241 GCTFHMTHHQDFLTNFQKGDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPK 300

Query: 354 LKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSDSAAIASG 413
           LKRNLISLGELDRSGCTIKSENGVMKVTKGS VKLRGTLRHGLYVLEGTTVS SAAIAS 
Sbjct: 301 LKRNLISLGELDRSGCTIKSENGVMKVTKGSSVKLRGTLRHGLYVLEGTTVSGSAAIAS- 360

Query: 414 KVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHT 473
                                      GLLGGVKNVELPFCEHCIM KSTRVKFGKGKHT
Sbjct: 361 ---------------------------GLLGGVKNVELPFCEHCIMEKSTRVKFGKGKHT 420

Query: 474 TKGILDYIHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDKAFGKFLE 512
           TKGILDY+HSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKD+AFGKFLE
Sbjct: 421 TKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLE 447

[Close]

BLAST of Pay0018336 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 112.8 bits (281), Expect = 7.9e-25
Identity = 53/112 (47.32%), Postives = 71/112 (63.39%), Query Frame = 0


Query: 359 GVMKVTKGSLVKLRGTLRHGLYVLEGTTVSDSAAIASGKVTDMSMLWHKRLAHVSERGLQ 418
           GV+KV KG    L+G     LY+L+G+  +  + +A     D + LWH RLAH+S+RG++
Sbjct: 27  GVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLAE-TAKDETRLWHSRLAHMSQRGME 86

Query: 419 ALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDYIHSDLWG 471
            L ++G L   K   L FCE CI GK+ RV F  G+HTTK  LDY+HSDLWG
Sbjct: 87  LLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWG 137

[Close]

BLAST of Pay0018336 vs. TAIR 10
Match: AT3G21000.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 53.1 bits (126), Expect = 7.4e-07
Identity = 39/148 (26.35%), Postives = 61/148 (41.22%), Query Frame = 0


Query: 201 KGKSRK-CFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGCDSAETGYESAE 260
           K KS K C LC+K  H +++C      +    E  +   Y                E+  
Sbjct: 223 KSKSEKWCGLCYKNNHNQEDCKFRIHTDKEEKEDEIVVDYR--------------LETVP 282

Query: 261 VLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIA 320
            L     D  D WI+      +MTP+  + T   +     V   D     V+G G V+I 
Sbjct: 283 NLGAKTYD-DDIWIIHKMAPINMTPYVKYFTTLDRTFKATVGTVDGTVLLVEGKGDVKIR 342

Query: 321 THDGMVRILTNVRYVPKLKRNLISLGEL 348
             +G  + + NV +VP L RN++S G++
Sbjct: 343 MKEGKKKTIRNVIFVPGLNRNVLSFGKM 355

The following BLAST results are available for this feature:

BLAST of Pay0018336 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	4.8e-83	33.15	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	3.7e-35	24.06	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	1.2e-30	25.28	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	2.4e-26	22.68	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P93293	1.1e-23	47.32	Uncharacterized mitochondrial protein AtMg00300 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Pay0018336 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U2U7	2.8e-288	95.64	Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. maku...	[more]
A0A5D3DNU1	4.5e-286	95.27	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5A7UB25	1.4e-284	94.89	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A5A7VKC2	8.8e-258	88.07	Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuw...	[more]
A0A5D3CFX6	7.6e-225	86.53	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of Pay0018336 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0047995.1	5.8e-288	95.64	retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa...	[more]
TYK25306.1	9.3e-286	95.27	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0050719.1	3.0e-284	94.89	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0067607.1	1.8e-257	88.07	retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa]...	[more]
TYK10877.1	1.6e-224	86.53	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of Pay0018336 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00300.1	7.9e-25	47.32	Gag-Pol-related retrotransposon family protein	[more]
AT3G21000.1	7.4e-07	26.35	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 206..222 e-value: 0.004 score: 26.0
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 205..221 score: 9.553822
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 453..510 e-value: 1.3E-7 score: 33.0
None	No IPR available	GENE3D	4.10.60.10		coord: 185..234 e-value: 4.9E-7 score: 31.5
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 55..179 e-value: 3.6E-29 score: 101.3
None	No IPR available	PANTHER	PTHR34676	FAMILY NOT NAMED	coord: 3..158 coord: 185..407
None	No IPR available	PANTHER	PTHR34676:SF12	ZINC FINGER, CCHC-TYPE, RIBONUCLEASE H-LIKE DOMAIN, GAG-PRE-INTEGRASE DOMAIN PROTEIN-RELATED	coord: 3..158 coord: 185..407
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 378..445 e-value: 5.7E-17 score: 61.3
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 195..226
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 458..506

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0018336.1	Pay0018336.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0042393	histone binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding