Pay0018304 (gene) Melon (Payzawat) v1

Overview
NamePay0018304
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionHistone-lysine N-methyltransferase ASHH3
Locationchr05: 13018329 .. 13018625 (-)
RNA-Seq ExpressionPay0018304
SyntenyPay0018304
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCACTGCGCTTTCTCTCCCTCAGTCTTGGACAATCGACAGTGTCGTCCGCCCAGTCCATCTTCCTCAGCGTCGCTTACTATTTTTCCCTCTCACCCTCTGTATTCCTCACGGCGTCTCTCTCATCCAGTCGTTCGATTTCCAATTGCGCAAGTCCAACTCCAAAAGGTAAGTCTTTCTTATCCACTCTCTCGTCATCCTCACCGTCTTTTTAAAATTTTTTAATTAATTTTTTATTTTAAATCTCAGATCTTCATTTCTGATATCCCACATTCAGGGCCTCGGGTTTAGCTAA

mRNA sequence

ATGCTCACTGCGCTTTCTCTCCCTCAGTCTTGGACAATCGACAGTGTCGTCCGCCCAGTCCATCTTCCTCAGCGTCGCTTACTATTTTTCCCTCTCACCCTCTGTATTCCTCACGGCGTCTCTCTCATCCAGTCGTTCGATTTCCAATTGCGCAAGTCCAACTCCAAAAGATCTTCATTTCTGATATCCCACATTCAGGGCCTCGGGTTTAGCTAA

Coding sequence (CDS)

ATGCTCACTGCGCTTTCTCTCCCTCAGTCTTGGACAATCGACAGTGTCGTCCGCCCAGTCCATCTTCCTCAGCGTCGCTTACTATTTTTCCCTCTCACCCTCTGTATTCCTCACGGCGTCTCTCTCATCCAGTCGTTCGATTTCCAATTGCGCAAGTCCAACTCCAAAAGATCTTCATTTCTGATATCCCACATTCAGGGCCTCGGGTTTAGCTAA

Protein sequence

MLTALSLPQSWTIDSVVRPVHLPQRRLLFFPLTLCIPHGVSLIQSFDFQLRKSNSKRSSFLISHIQGLGFS
Homology
[Close]
BLAST of Pay0018304 vs. ExPASy TrEMBL
Match: A0A5D3B9N6 (Histone-lysine N-methyltransferase ASHH3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold767G00990 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 4.7e-24
Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 0 

Query: 1  MLTALSLPQSWTIDSVVRPVHLPQRRLLFFPLTLCIPHGVSLIQSFDFQLRKSNSKRSSF 60
          MLTALSLPQSWTIDSVVRPVHLPQRRLLFFPLTLCIPHGVSLIQSFDFQLRKSNSKR+S 
Sbjct: 1  MLTALSLPQSWTIDSVVRPVHLPQRRLLFFPLTLCIPHGVSLIQSFDFQLRKSNSKRASG 60

Query: 61 L 62
          L
Sbjct: 61 L 61

[Close]
BLAST of Pay0018304 vs. ExPASy TrEMBL
Match: A0A0A0LI07 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G149440 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.2e-06
Identity = 30/37 (81.08%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 1  MLTALSLPQSWTIDSVVRPVHLPQRRLLFFPLTLCIP 38
          MLTALSLP+SWTID VVRPVHLP RRLLF PLT   P
Sbjct: 1  MLTALSLPRSWTIDCVVRPVHLPHRRLLFCPLTASRP 37

[Close]
BLAST of Pay0018304 vs. NCBI nr
Match: KAA0060212.1 (histone-lysine N-methyltransferase ASHH3 [Cucumis melo var. makuwa] >TYJ95586.1 histone-lysine N-methyltransferase ASHH3 [Cucumis melo var. makuwa])

HSP 1 Score: 119.8 bits (299), Expect = 9.7e-24
Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 0 

Query: 1  MLTALSLPQSWTIDSVVRPVHLPQRRLLFFPLTLCIPHGVSLIQSFDFQLRKSNSKRSSF 60
          MLTALSLPQSWTIDSVVRPVHLPQRRLLFFPLTLCIPHGVSLIQSFDFQLRKSNSKR+S 
Sbjct: 1  MLTALSLPQSWTIDSVVRPVHLPQRRLLFFPLTLCIPHGVSLIQSFDFQLRKSNSKRASG 60

Query: 61 L 62
          L
Sbjct: 61 L 61

[Close]
BLAST of Pay0018304 vs. NCBI nr
Match: KAE8651774.1 (hypothetical protein Csa_005900, partial [Cucumis sativus])

HSP 1 Score: 62.0 bits (149), Expect = 2.4e-06
Identity = 30/37 (81.08%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 1  MLTALSLPQSWTIDSVVRPVHLPQRRLLFFPLTLCIP 38
          MLTALSLP+SWTID VVRPVHLP RRLLF PLT   P
Sbjct: 7  MLTALSLPRSWTIDCVVRPVHLPHRRLLFCPLTASRP 43

The following BLAST results are available for this feature:
BLAST of Pay0018304 vs.
Match NameE-valueIdentityDescription
BLAST of Pay0018304 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3B9N64.7e-2496.72Histone-lysine N-methyltransferase ASHH3 OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A0A0LI071.2e-0681.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G149440 PE=4 SV=1[more]
BLAST of Pay0018304 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0060212.19.7e-2496.72histone-lysine N-methyltransferase ASHH3 [Cucumis melo var. makuwa] >TYJ95586.1 ... [more]
KAE8651774.12.4e-0681.08hypothetical protein Csa_005900, partial [Cucumis sativus][more]
BLAST of Pay0018304 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0018304.1Pay0018304.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034968 histone lysine methylation
cellular_component GO:0005634 nucleus
molecular_function GO:0018024 histone-lysine N-methyltransferase activity