Pay0018212 (gene) Melon (Payzawat) v1

Overview


Name	Pay0018212
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	PHD-type domain-containing protein
Location	chr12: 12854409 .. 12859221 (+)
RNA-Seq Expression	Pay0018212
Synteny	Pay0018212

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAACAAGAAGTCAAAGTATCCGGATCTTCAAGTAGATTTGAGGTTAGATTTTATCTTTCTCATTTTGAATTTGTTGCACTTAAAATTTTATGACAAAGTTGTTTAGATATGTTTCATCCTCCATTTATCCCATTCTTGCAAATTTATCTCAAACTTGGTAGTGGTTATTGTTTCTGCCGCAACTGGAGGAATTATCTTTTCTTATTTAGAGCAACCTGTTAGTACCGGAATATTTTTCTATTACTTCATTGTCTTCTGTCTACAACGCAATATAACAAACTTATTGGTATTCTTTTGCTCGTCTTGGAGATTTTGAATCTTGGGACATTTTTCTTCCTTCCTATAAATCAATTGAAGTTTATTTCTGGTTCAAAAAGTTTGCTGACCGAGAGTTTTCTTTTAACTTCTAGGGGTATGTATTTGTGTCGCACACTTAGCTACCGAGGAGCAGAATTTAACATTGTGGAAGCACCGTTGGAAGCTGAGATGATGGTATAGTGTATTGGTTCCTCTAATTTTAGTAAGGAGAAGTTGAACTCAATTTTTTCTGTTTAACACGCGCCTAAATATTTGTATTATGAAAATGAAATATAACTATTACATGAAGTTAACCTGACCGTCTTCTCTGTTAGATAGGAATCCAATGATTCCAACGCTTGCTATCTCTTTTTCTTTACAAATGTGATTAATTATCATTCTTTTATGCAGTTTACTATGGTCTCTTGAAACTCTGTGGTTCTATATCCTACTTAGGAAATGTATGCATTAACTGCTGAATTTTGGGCAAAGCTGCAATTAGAATGGATGACAACAAGTGCTTATGTTACTAGTTACAAGCCTAGCACCAATCAACTTTGGCGATTATTTTGGGCAAGTCATCAGGTATATATATTTGGGATTTTTCTTAAAAGTTGAGTTTCTCTTTAAGTTGGACTTTTAAATATTTATATTATTTTTAATTTAATTTAAGGTTTACAAAGGTATATGTTCTATACCATTTCTCTTACTTCAAAACTTCGTCCTTTTGTAATGTCTCTTCAGGCATATCTGTATGTCTGCAAAGGTTCCTGCTAGTGTTAGACTAGCTAGCTAAGCAATCATTATTGGAAGATAAATGTGTATTATTGAGATTGAAAATCCTAACTTGGTCAAGCTAAAAACCTTGAAGCTAGAGATATTGATGTAAGCTAATATTCATCCTTACACACGGTTTTACAATTCGAACATTGATATACAGTTGATGTGTGTAATTTCGCTTCATGTTACAGATCGGGAAAACAACTGAACTTTCAAGGCGTGAATGGTTGTTATAAGTTCTATATTGTTTGTTTTAACAGATATTCAACATTTATTCAATTTCTATGATTATTGTTCTAGAAACAAATATGCCATTGTATAGATTTAGGGATGCTTTTCTTACAGTTTACGAACTTGTATTTATTCTTTTTACCAGGGAAGAGATAGAGAAACAAAAGGCTCACGAGCAATTCATGAGGCTCCAAAAACAAGGAAAAACTGAACAAGCTAGGAAAGATTTAGGTAATCCTTTTTCAATGATCAATTGTTTAAGTGTATCTTTTATGTTTATGAGAATGCAATCTTTTTATGATTTTTCTGTCATCCAAGAATGAAATTCTTTTCAATTTTTCTCTAAAATTTTTTAGCCTATCTTTTGTTTAGGAAAGATAACGGTTCTGTGCAAATGTTACTAAATTTTAGTAGTTGGCTCCAAAGTTGATGCAATTTGTATGAACTGTTGATCTAGATTAATAGTTTTATGGAGTGGAGATGAATATTTTGGTTTTCATAAATTGTAATCAAATATAGGTAGTTGCTTTTGACCTTTATATAAAGTTTCATAAAATTTCAAGAATGTCACTCCTCCAGAGAAGTTAAAGTTCGTCCAATGGCTTATTATTATTTAAGCGACCTCCCACAACGTTGTACATCTATTTTGTATGATTCATATAGGACATACGATGAACTATGATACCTTAGAGGAACTATGCATATAAAATTTTTTGTAGATATTTGAGCTTCAATAATTTAAAGGGAAAAATTCTAAGGGAGCTTGGTAGTCTTCTAGAGCTTCAATACCTACATCTACAACAAAATTGTTTCATTGGACGAATTCCTCCTGAATTGGGCACCCTGCAACATCTTCGCCACTTGTAAATTTTACTTACTTTCTTATATTGTTGACAAAACTCATATTTAGTTATATACCTAATATCAATTTGATAACTGTGATTGCTCAATACTTATGAATTGTTATATAGTATATTGCTCTTCTGTTATTACTCTTCGAATATATACCATTTAGAAAATTGTATATTGCCTTAATCTTGCTTCCTTCCATGTTGTACCGACATGTGCATGTTCGTGAGACCCCACTATATTATTGTGATTTTATCTACTTCTTGTAGATTGGCTCTACTGTTGATGATACTTATTTTAGCTCATGAATTGGAGATAGAGGATGCGTAATGCAAGTTTATTGAAGCAAGTTTGTTTTCTTTTCCTTTTGTAAATGCTTCGCATGTTGCCCACTGTTTTGTCGCTCATGCATGTTTGAGTTGTGAATTATATTCTACTCATGTTAATTTTTTGTATGAGATTATTTGTGATATGTTGGGTCTTTGTCTGAGAGCTTAGCTATCGCTTGAGCAGCAAAGACTAACCAATATTATTTTCCTTCACTCTGAATATGTGTAGATATTTTATATTATTCATGGTCGCCTGCGATGACTATAAGTTCTATCTGTATCATCATTCTCTCCATGCTATCGAGTTCCACAACAAAGGTACGATTCACTTCCTTCCATTTTGATTCTAAATGTATAGAGTTAATACATTGTTATGGAGGTGCTGGAAGTAGCAAAATTCTTACATTCTTTGAAATTGTTAAGATTCAAGTAACGTGTGTCCCTCTCTTGATGGCCGCTTGCTTTTCTGTGGTTGGAGCTTGTTTGGCTAATTGATTGATGGGCAGGTGTTCAAGTGCATCATACTAATCCCCGTATCATGTCATTTTAGTTTTGATTACCTTTTATTTTAATTCCACGCACAGAGGTTAGAGTTTGTTGAAAACAATTTTTCATGAAAATTTTCATTCTTACTACATTTAGATGTTCTTTTACTTGTTTTAGCTTGTACCCCTTTTTTGAACTCCTTGATGACTGCAAAAGCAATATAGTTGTAAACATAAGATACCCAAAAATCAACTCAGTTTCCTTTATTCCCTGCTCTCCCTCCTGTGTCTCTTTCAATTTGTTCTATGTTATAAATTGTGTGATTTAACTACCACTTTTGTTCTTTTAAATATTATTTACGAATTATGACACTTTGATTTGAGTAATATGTCTTTTACATGGAATATATTTACATACACGTGTTAACACACCATGGCACTCCGATACATATTAACACACATATTTAAGTGACACTAATCTCTGAGATAAGTTGACAATTATGTTAAGTGACCTTGTCGAAGTTCTATCATTATCCTCAAGTAGTACAAGGATTTATCCTTTTACAATTCTAAAGTATGTTGATTGGTTTGTTTGAATTGTGAGCTAATTCATTTATTTTGCATGTTTATAGGTTGATACACAAAGATCATACTCACAGGCCGAGTTAGACAAGATGCAGGTTGAGTTAGCTGACTTTCTGGGTTTGTACGTATGATTTCGACTTATTTGGGATTCTGAAGTAGGAAATTTTTTTTGTGGTTGTCATACTTAAACTTTATGTATATAGATAATATAGATGAATTGTTTGAATTATTCATATGGAGGTGGGTGGAGTTGATGGGTACAATTAAGAACACTACCATATTGTTTATTGGTGGGCTAAGTTAGTTCATTAGAGGATGTTGAGTTGAATTCTTGGCAATCTAATGGAATCAGTTGTATTGGTCTTGTAAATGATCTACAATATTCATGTATGTATAGTTTTGGAAATGATATGGTGAAAGGTTTTATTTATATATGTTTGAGATTTGAAACTATATTTAATGAATATCGTCGTTTATCTATATTTATGAAACTGTTGTTAGACCACTATATAGGACCAATGAGAGCATAATACAGAAACAAAAATATAATTGAATTAATAATTAAAAAAAAAAATCGAAAAAATTGGCTTGACGGTTTTAAAAGTTCATAAACAAGTGATTCTTGATGGTTTTTCAAGTCATAACAACCAACTTCTTGACGGTTTTTAATGTCATAAACAATTGCATACTCTTGACGGTTATCAAATGTCATAAATATTCTTATTCTTGACGATTTTTCATGTTACCCATATTTTGGACGGTTCTAAACTGTCATGAACATATGTACTATTGACGGTTTTAAACTGTCATGAAAATTTATATACTTTACGGTTTAAAACTGTCAACATTTACTAACTTTGACAGTCTTGACACTGGCTTTAATGACGATTTTAAAACCGTCAAGAATAATGATTCTTGATAGTTTAAAACTGTCAAGAGAGTCTATTTTTGTACTAGTGGATATGCATGCTTAATTGGGTAGTTGACAACCACCCAGAATGGAAGGACCTTGCAGAGAGGGCCTTTGACAATGAACAGGTTTATTGACATAACTGTATATTATATAATTACTGTGAATATTATATAGATATACGTACATTTAGTAGAAACTGATTTTTCCATGTCATTTTTGCGACAGTTTCAATTCAAGGTCATGTTTCCTGACGAAGATTTTGTAGAACGAAGCACGTTCTATAAAAGGCAAAGTACAGAGGAAACTCAAAAAAGATTTGAGAAAGGAGAATGCTCATGA

mRNA sequence

ATGTCAAACAAGAAGTCAAAGTATCCGGATCTTCAAGTAGATTTGAGGGGTATGTATTTGTGTCGCACACTTAGCTACCGAGGAGCAGAATTTAACATTGTGGAAGCACCGTTGGAAGCTGAGATGATGGAAATGTATGCATTAACTGCTGAATTTTGGGCAAAGCTGCAATTAGAATGGATGACAACAAGTGCTTATGTTACTAGTTACAAGCCTAGCACCAATCAACTTTGGCGATTATTTTGGGCAAGTCATCAGGTATATATATTTGGGATTTTTCTTAAAATTTACGAACTTGTATTTATTCTTTTTACCAGGGAAGAGATAGAGAAACAAAAGGCTCACGAGCAATTCATGAGGCTCCAAAAACAAGGAAAAACTGAACAAGCTAGGAAAGATTTAGATATTTTATATTATTCATGGTCGCCTGCGATGACTATAAGTTCTATCTGTATCATCATTCTCTCCATGCTATCGAGTTCCACAACAAAGTTTCAATTCAAGGTCATGTTTCCTGACGAAGATTTTGTAGAACGAAGCACGTTCTATAAAAGGCAAAGTACAGAGGAAACTCAAAAAAGATTTGAGAAAGGAGAATGCTCATGA

Coding sequence (CDS)

ATGTCAAACAAGAAGTCAAAGTATCCGGATCTTCAAGTAGATTTGAGGGGTATGTATTTGTGTCGCACACTTAGCTACCGAGGAGCAGAATTTAACATTGTGGAAGCACCGTTGGAAGCTGAGATGATGGAAATGTATGCATTAACTGCTGAATTTTGGGCAAAGCTGCAATTAGAATGGATGACAACAAGTGCTTATGTTACTAGTTACAAGCCTAGCACCAATCAACTTTGGCGATTATTTTGGGCAAGTCATCAGGTATATATATTTGGGATTTTTCTTAAAATTTACGAACTTGTATTTATTCTTTTTACCAGGGAAGAGATAGAGAAACAAAAGGCTCACGAGCAATTCATGAGGCTCCAAAAACAAGGAAAAACTGAACAAGCTAGGAAAGATTTAGATATTTTATATTATTCATGGTCGCCTGCGATGACTATAAGTTCTATCTGTATCATCATTCTCTCCATGCTATCGAGTTCCACAACAAAGTTTCAATTCAAGGTCATGTTTCCTGACGAAGATTTTGTAGAACGAAGCACGTTCTATAAAAGGCAAAGTACAGAGGAAACTCAAAAAAGATTTGAGAAAGGAGAATGCTCATGA

Protein sequence

MSNKKSKYPDLQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEWMTTSAYVTSYKPSTNQLWRLFWASHQVYIFGIFLKIYELVFILFTREEIEKQKAHEQFMRLQKQGKTEQARKDLDILYYSWSPAMTISSICIIILSMLSSSTTKFQFKVMFPDEDFVERSTFYKRQSTEETQKRFEKGECS

Homology

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BLAST of Pay0018212 vs. ExPASy Swiss-Prot
Match: F4IF36 (Protein FORGETTER 1 OS=Arabidopsis thaliana OX=3702 GN=FGT1 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.2e-19
Identity = 49/120 (40.83%), Postives = 79/120 (65.83%), Query Frame = 0


Query: 11  LQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEWMTTSAYVTSY 70
           + +  RGMY+CRTLSY+GAEF IVEA LEA M  MY  +AEFWA+L++E ++ SA++ + 
Sbjct: 477 MDMKARGMYVCRTLSYKGAEFEIVEARLEAGMEAMYNKSAEFWAELRIELLSASAFLPNE 536

Query: 71  KPSTNQLWRLFWASHQVYIFGIFLKIYELVFILFTREEIEKQKAHEQFMRLQKQGKTEQA 130
           KP+++QLWRL+W+SHQ +   + +     V +   ++ +   K     ++   + +TE+A
Sbjct: 537 KPNSSQLWRLYWSSHQRFFRHLCMSAKVPVTVRLAKKALSTNKCVVIGLQSTGEARTEEA 596

[Close]

BLAST of Pay0018212 vs. ExPASy Swiss-Prot
Match: A8JUV0 (Protein strawberry notch OS=Drosophila melanogaster OX=7227 GN=sno PE=1 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 1.1e-06
Identity = 29/103 (28.16%), Postives = 50/103 (48.54%), Query Frame = 0


Query: 11  LQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEWMTTSAYVTSY 70
           + + LRGMY+ R LS++G  F I E PL  E  ++Y  + E W +   ++   +  + + 
Sbjct: 714 MDMKLRGMYIARQLSFKGVSFKIEEVPLSKEFRKIYDQSVELWVEAMQKFTEAAELIDAE 773

Query: 71  KPSTNQLWRLFWASHQVYIFGIFLKIYELVFILFTREEIEKQK 114
                 +W  FW+SHQ +   + +       +L  RE I+  K
Sbjct: 774 SRMKKTMWGQFWSSHQRFFKYLCIAAKVNHAVLVARESIKYGK 816

[Close]

BLAST of Pay0018212 vs. ExPASy Swiss-Prot
Match: Q9FWT2 (Probable ubiquitin-conjugating enzyme E2 16 OS=Arabidopsis thaliana OX=3702 GN=UBC16 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 9.2e-06
Identity = 27/31 (87.10%), Postives = 28/31 (90.32%), Query Frame = 0


Query: 134 LDILYYSWSPAMTISSICIIILSMLSSSTTK 165
           LDILY SWSPAMT+SSICI ILSMLSSST K
Sbjct: 100 LDILYDSWSPAMTVSSICISILSMLSSSTEK 130

[Close]

BLAST of Pay0018212 vs. ExPASy Swiss-Prot
Match: O01737 (Protein strawberry notch homolog OS=Caenorhabditis elegans OX=6239 GN=let-765 PE=1 SV=3)

HSP 1 Score: 50.1 bits (118), Expect = 3.5e-05
Identity = 29/99 (29.29%), Postives = 50/99 (50.51%), Query Frame = 0


Query: 16   RGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEWMTTSAYVTSYKPST- 75
            RG+YL R LS+RG  F + E  L +E ++MY    + W + + ++ T    +   + ST 
Sbjct: 904  RGLYLARQLSFRGVSFAVQEVQLSSEFVKMYDAAVKLWMEARRQFQTVIETMDEEERSTC 963

Query: 76   NQLWRLFWASHQVYIFGIFLKIYELVFILFTREEIEKQK 114
              +W  FWA HQ +   + +       +  +RE I+ +K
Sbjct: 964  KTVWGQFWACHQRFFKYLCIAAKVDTCVQLSREAIKAKK 1002

[Close]

BLAST of Pay0018212 vs. ExPASy Swiss-Prot
Match: Q5F371 (Protein strawberry notch homolog 1 OS=Gallus gallus OX=9031 GN=SBNO1 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 4.6e-05
Identity = 27/103 (26.21%), Postives = 49/103 (47.57%), Query Frame = 0


Query: 11  LQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEWMTTSAYVTSY 70
           + + LRGMY+ R LS+ G  F I E  L  E ++MY  + + W   +  +   +  + + 
Sbjct: 520 MDMKLRGMYIARQLSFSGVTFKIDEVLLSQEYVKMYNKSVKLWVSARERFQQAADLIDAE 579

Query: 71  KPSTNQLWRLFWASHQVYIFGIFLKIYELVFILFTREEIEKQK 114
           +     +W  FW++HQ +   + +       +   REEI+  K
Sbjct: 580 QRMKKSMWGQFWSAHQRFFKYLCIASKVKRVVQLAREEIKNGK 622

[Close]

BLAST of Pay0018212 vs. ExPASy TrEMBL
Match: A0A1S4E317 (uncharacterized protein LOC103499968 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499968 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.3e-98
Identity = 191/201 (95.02%), Postives = 191/201 (95.02%), Query Frame = 0


Query: 1   MSNKKSKYPDLQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEW 60
           MSNKKSKYPDLQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEW
Sbjct: 1   MSNKKSKYPDLQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEW 60

Query: 61  MTTSAYVTSYKPSTNQLWRLFWASHQVYIFGIFLKIYELVFILFTREEIEKQKAHEQFMR 120
           MTTSAYVTSYKPSTNQLWRLFWASHQVYIFGIFLK          REEIEKQKAHEQFMR
Sbjct: 61  MTTSAYVTSYKPSTNQLWRLFWASHQVYIFGIFLK----------REEIEKQKAHEQFMR 120

Query: 121 LQKQGKTEQARKDLDILYYSWSPAMTISSICIIILSMLSSSTTKFQFKVMFPDEDFVERS 180
           LQKQGKTEQARKDLDILYYSWSPAMTISSICIIILSMLSSSTTKFQFKVMFPDEDFVERS
Sbjct: 121 LQKQGKTEQARKDLDILYYSWSPAMTISSICIIILSMLSSSTTKFQFKVMFPDEDFVERS 180

Query: 181 TFYKRQSTEETQKRFEKGECS 202
           TFYKRQSTEETQKRFEKGECS
Sbjct: 181 TFYKRQSTEETQKRFEKGECS 191

[Close]

BLAST of Pay0018212 vs. ExPASy TrEMBL
Match: A0A1S3CE76 (uncharacterized protein LOC103499968 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499968 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 6.0e-77
Identity = 154/164 (93.90%), Postives = 154/164 (93.90%), Query Frame = 0


Query: 1   MSNKKSKYPDLQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEW 60
           MSNKKSKYPDLQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEW
Sbjct: 1   MSNKKSKYPDLQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEW 60

Query: 61  MTTSAYVTSYKPSTNQLWRLFWASHQVYIFGIFLKIYELVFILFTREEIEKQKAHEQFMR 120
           MTTSAYVTSYKPSTNQLWRLFWASHQVYIFGIFLK          REEIEKQKAHEQFMR
Sbjct: 61  MTTSAYVTSYKPSTNQLWRLFWASHQVYIFGIFLK----------REEIEKQKAHEQFMR 120

Query: 121 LQKQGKTEQARKDLDILYYSWSPAMTISSICIIILSMLSSSTTK 165
           LQKQGKTEQARKDLDILYYSWSPAMTISSICIIILSMLSSSTTK
Sbjct: 121 LQKQGKTEQARKDLDILYYSWSPAMTISSICIIILSMLSSSTTK 154

[Close]

BLAST of Pay0018212 vs. ExPASy TrEMBL
Match: A0A6J1D689 (protein FORGETTER 1 OS=Momordica charantia OX=3673 GN=LOC111018011 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 2.6e-27
Identity = 63/76 (82.89%), Postives = 67/76 (88.16%), Query Frame = 0


Query: 11  LQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEWMTTSAYVTSY 70
           + +  RGMYLCRTLSYRGAEF IVEAPLEAEMMEMY L AEFWAKL++E MT SAYVTS 
Sbjct: 331 MDMKARGMYLCRTLSYRGAEFEIVEAPLEAEMMEMYTLAAEFWAKLRVELMTASAYVTSD 390

Query: 71  KPSTNQLWRLFWASHQ 87
           KPSTNQLWRLFWASHQ
Sbjct: 391 KPSTNQLWRLFWASHQ 406

[Close]

BLAST of Pay0018212 vs. ExPASy TrEMBL
Match: A0A1S3C445 (protein strawberry notch OS=Cucumis melo OX=3656 GN=LOC103496271 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 9.8e-27
Identity = 68/120 (56.67%), Postives = 85/120 (70.83%), Query Frame = 0


Query: 11  LQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEWMTTSAYVTSY 70
           + +  RGMYLCRTLSYRGAEF+IVEAPLEAEMMEMY L AEFWAKL+LE MT SAYVTS 
Sbjct: 452 MDMKARGMYLCRTLSYRGAEFDIVEAPLEAEMMEMYTLAAEFWAKLRLELMTASAYVTSD 511

Query: 71  KPSTNQLWRLFWASHQVYIFGIFLKIYELVFILFTREEIEKQKAHEQFMRLQKQGKTEQA 130
           KPSTNQLWRLFWASHQ +   + +       +   ++ + + K     ++   + +TE+A
Sbjct: 512 KPSTNQLWRLFWASHQRFFRHMCMSAKVPATVRLAKQALSEDKCVVIGLQSTGEARTEEA 571

[Close]

BLAST of Pay0018212 vs. ExPASy TrEMBL
Match: A0A5A7UME3 (Protein strawberry notch OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G005490 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 1.7e-26
Identity = 68/115 (59.13%), Postives = 83/115 (72.17%), Query Frame = 0


Query: 16  RGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEWMTTSAYVTSYKPSTN 75
           RGMYLCRTLSYRGAEF+IVEAPLEAEMMEMY L AEFWAKL+LE MT SAYVTS KPSTN
Sbjct: 456 RGMYLCRTLSYRGAEFDIVEAPLEAEMMEMYTLAAEFWAKLRLELMTASAYVTSDKPSTN 515

Query: 76  QLWRLFWASHQVYIFGIFLKIYELVFILFTREEIEKQKAHEQFMRLQKQGKTEQA 131
           QLWRLFWASHQ +   + +       +   ++ + + K     ++   + +TE+A
Sbjct: 516 QLWRLFWASHQRFFRHMCMSAKVPATVRLAKQALSEDKCVVIGLQSTGEARTEEA 570

[Close]

BLAST of Pay0018212 vs. NCBI nr
Match: XP_016902613.1 (PREDICTED: uncharacterized protein LOC103499968 isoform X1 [Cucumis melo])

HSP 1 Score: 369.0 bits (946), Expect = 2.6e-98
Identity = 191/201 (95.02%), Postives = 191/201 (95.02%), Query Frame = 0


Query: 1   MSNKKSKYPDLQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEW 60
           MSNKKSKYPDLQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEW
Sbjct: 1   MSNKKSKYPDLQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEW 60

Query: 61  MTTSAYVTSYKPSTNQLWRLFWASHQVYIFGIFLKIYELVFILFTREEIEKQKAHEQFMR 120
           MTTSAYVTSYKPSTNQLWRLFWASHQVYIFGIFLK          REEIEKQKAHEQFMR
Sbjct: 61  MTTSAYVTSYKPSTNQLWRLFWASHQVYIFGIFLK----------REEIEKQKAHEQFMR 120

Query: 121 LQKQGKTEQARKDLDILYYSWSPAMTISSICIIILSMLSSSTTKFQFKVMFPDEDFVERS 180
           LQKQGKTEQARKDLDILYYSWSPAMTISSICIIILSMLSSSTTKFQFKVMFPDEDFVERS
Sbjct: 121 LQKQGKTEQARKDLDILYYSWSPAMTISSICIIILSMLSSSTTKFQFKVMFPDEDFVERS 180

Query: 181 TFYKRQSTEETQKRFEKGECS 202
           TFYKRQSTEETQKRFEKGECS
Sbjct: 181 TFYKRQSTEETQKRFEKGECS 191

[Close]

BLAST of Pay0018212 vs. NCBI nr
Match: XP_008461368.1 (PREDICTED: uncharacterized protein LOC103499968 isoform X2 [Cucumis melo])

HSP 1 Score: 297.0 bits (759), Expect = 1.2e-76
Identity = 154/164 (93.90%), Postives = 154/164 (93.90%), Query Frame = 0


Query: 1   MSNKKSKYPDLQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEW 60
           MSNKKSKYPDLQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEW
Sbjct: 1   MSNKKSKYPDLQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEW 60

Query: 61  MTTSAYVTSYKPSTNQLWRLFWASHQVYIFGIFLKIYELVFILFTREEIEKQKAHEQFMR 120
           MTTSAYVTSYKPSTNQLWRLFWASHQVYIFGIFLK          REEIEKQKAHEQFMR
Sbjct: 61  MTTSAYVTSYKPSTNQLWRLFWASHQVYIFGIFLK----------REEIEKQKAHEQFMR 120

Query: 121 LQKQGKTEQARKDLDILYYSWSPAMTISSICIIILSMLSSSTTK 165
           LQKQGKTEQARKDLDILYYSWSPAMTISSICIIILSMLSSSTTK
Sbjct: 121 LQKQGKTEQARKDLDILYYSWSPAMTISSICIIILSMLSSSTTK 154

[Close]

BLAST of Pay0018212 vs. NCBI nr
Match: XP_022149625.1 (protein FORGETTER 1 [Momordica charantia])

HSP 1 Score: 132.1 bits (331), Expect = 5.3e-27
Identity = 63/76 (82.89%), Postives = 67/76 (88.16%), Query Frame = 0


Query: 11  LQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEWMTTSAYVTSY 70
           + +  RGMYLCRTLSYRGAEF IVEAPLEAEMMEMY L AEFWAKL++E MT SAYVTS 
Sbjct: 331 MDMKARGMYLCRTLSYRGAEFEIVEAPLEAEMMEMYTLAAEFWAKLRVELMTASAYVTSD 390

Query: 71  KPSTNQLWRLFWASHQ 87
           KPSTNQLWRLFWASHQ
Sbjct: 391 KPSTNQLWRLFWASHQ 406

[Close]

BLAST of Pay0018212 vs. NCBI nr
Match: XP_008456277.2 (PREDICTED: protein strawberry notch [Cucumis melo])

HSP 1 Score: 130.2 bits (326), Expect = 2.0e-26
Identity = 68/120 (56.67%), Postives = 85/120 (70.83%), Query Frame = 0


Query: 11  LQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEWMTTSAYVTSY 70
           + +  RGMYLCRTLSYRGAEF+IVEAPLEAEMMEMY L AEFWAKL+LE MT SAYVTS 
Sbjct: 452 MDMKARGMYLCRTLSYRGAEFDIVEAPLEAEMMEMYTLAAEFWAKLRLELMTASAYVTSD 511

Query: 71  KPSTNQLWRLFWASHQVYIFGIFLKIYELVFILFTREEIEKQKAHEQFMRLQKQGKTEQA 130
           KPSTNQLWRLFWASHQ +   + +       +   ++ + + K     ++   + +TE+A
Sbjct: 512 KPSTNQLWRLFWASHQRFFRHMCMSAKVPATVRLAKQALSEDKCVVIGLQSTGEARTEEA 571

[Close]

BLAST of Pay0018212 vs. NCBI nr
Match: XP_038901068.1 (protein FORGETTER 1 isoform X1 [Benincasa hispida])

HSP 1 Score: 130.2 bits (326), Expect = 2.0e-26
Identity = 62/76 (81.58%), Postives = 66/76 (86.84%), Query Frame = 0


Query: 11  LQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEWMTTSAYVTSY 70
           + +  RGMYLCRTLSYRGAEF IVEAPLEAEMMEMY L AEFWAKL++E MT SAYVTS 
Sbjct: 449 MDMKARGMYLCRTLSYRGAEFEIVEAPLEAEMMEMYTLAAEFWAKLRVELMTASAYVTSD 508

Query: 71  KPSTNQLWRLFWASHQ 87
           KPS NQLWRLFWASHQ
Sbjct: 509 KPSANQLWRLFWASHQ 524

[Close]

BLAST of Pay0018212 vs. TAIR 10
Match: AT1G79350.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 96.7 bits (239), Expect = 2.3e-20
Identity = 49/120 (40.83%), Postives = 79/120 (65.83%), Query Frame = 0


Query: 11  LQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEWMTTSAYVTSY 70
           + +  RGMY+CRTLSY+GAEF IVEA LEA M  MY  +AEFWA+L++E ++ SA++ + 
Sbjct: 477 MDMKARGMYVCRTLSYKGAEFEIVEARLEAGMEAMYNKSAEFWAELRIELLSASAFLPNE 536

Query: 71  KPSTNQLWRLFWASHQVYIFGIFLKIYELVFILFTREEIEKQKAHEQFMRLQKQGKTEQA 130
           KP+++QLWRL+W+SHQ +   + +     V +   ++ +   K     ++   + +TE+A
Sbjct: 537 KPNSSQLWRLYWSSHQRFFRHLCMSAKVPVTVRLAKKALSTNKCVVIGLQSTGEARTEEA 596

[Close]

BLAST of Pay0018212 vs. TAIR 10
Match: AT5G46020.1 (CONTAINS InterPro DOMAIN/s: Casein kinase substrate, phosphoprotein PP28 (InterPro:IPR019380); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 54.7 bits (130), Expect = 1.0e-07
Identity = 26/32 (81.25%), Postives = 31/32 (96.88%), Query Frame = 0


Query: 106 REEIEKQKAHEQFMRLQKQGKTEQARKDLDIL 138
           REE+EKQ+AHE++MRLQ+QGKTEQARKDLD L
Sbjct: 103 REELEKQRAHERYMRLQEQGKTEQARKDLDRL 134

[Close]

BLAST of Pay0018212 vs. TAIR 10
Match: AT1G75440.1 (ubiquitin-conjugating enzyme 16 )

HSP 1 Score: 52.0 bits (123), Expect = 6.5e-07
Identity = 27/31 (87.10%), Postives = 28/31 (90.32%), Query Frame = 0


Query: 134 LDILYYSWSPAMTISSICIIILSMLSSSTTK 165
           LDILY SWSPAMT+SSICI ILSMLSSST K
Sbjct: 100 LDILYDSWSPAMTVSSICISILSMLSSSTEK 130

[Close]

BLAST of Pay0018212 vs. TAIR 10
Match: AT5G42990.1 (ubiquitin-conjugating enzyme 18 )

HSP 1 Score: 49.3 bits (116), Expect = 4.2e-06
Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = 0


Query: 134 LDILYYSWSPAMTISSICIIILSMLSSSTTK 165
           LDILY SWSPAMT+SS+CI ILSMLSSS  K
Sbjct: 100 LDILYDSWSPAMTVSSVCISILSMLSSSPEK 130

[Close]

BLAST of Pay0018212 vs. TAIR 10
Match: AT1G45050.1 (Ubiquitin-conjugating enzyme family protein )

HSP 1 Score: 48.5 bits (114), Expect = 7.2e-06
Identity = 24/31 (77.42%), Postives = 27/31 (87.10%), Query Frame = 0


Query: 134 LDILYYSWSPAMTISSICIIILSMLSSSTTK 165
           LDILY SWSPAMT++S+CI ILSMLSSS  K
Sbjct: 100 LDILYDSWSPAMTVNSVCISILSMLSSSPAK 130

The following BLAST results are available for this feature:

BLAST of Pay0018212 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IF36	3.2e-19	40.83	Protein FORGETTER 1 OS=Arabidopsis thaliana OX=3702 GN=FGT1 PE=1 SV=1	[more]
A8JUV0	1.1e-06	28.16	Protein strawberry notch OS=Drosophila melanogaster OX=7227 GN=sno PE=1 SV=2	[more]
Q9FWT2	9.2e-06	87.10	Probable ubiquitin-conjugating enzyme E2 16 OS=Arabidopsis thaliana OX=3702 GN=U...	[more]
O01737	3.5e-05	29.29	Protein strawberry notch homolog OS=Caenorhabditis elegans OX=6239 GN=let-765 PE...	[more]
Q5F371	4.6e-05	26.21	Protein strawberry notch homolog 1 OS=Gallus gallus OX=9031 GN=SBNO1 PE=2 SV=1	[more]

BLAST of Pay0018212 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E317	1.3e-98	95.02	uncharacterized protein LOC103499968 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CE76	6.0e-77	93.90	uncharacterized protein LOC103499968 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1D689	2.6e-27	82.89	protein FORGETTER 1 OS=Momordica charantia OX=3673 GN=LOC111018011 PE=3 SV=1	[more]
A0A1S3C445	9.8e-27	56.67	protein strawberry notch OS=Cucumis melo OX=3656 GN=LOC103496271 PE=3 SV=1	[more]
A0A5A7UME3	1.7e-26	59.13	Protein strawberry notch OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]

BLAST of Pay0018212 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902613.1	2.6e-98	95.02	PREDICTED: uncharacterized protein LOC103499968 isoform X1 [Cucumis melo]	[more]
XP_008461368.1	1.2e-76	93.90	PREDICTED: uncharacterized protein LOC103499968 isoform X2 [Cucumis melo]	[more]
XP_022149625.1	5.3e-27	82.89	protein FORGETTER 1 [Momordica charantia]	[more]
XP_008456277.2	2.0e-26	56.67	PREDICTED: protein strawberry notch [Cucumis melo]	[more]
XP_038901068.1	2.0e-26	81.58	protein FORGETTER 1 isoform X1 [Benincasa hispida]	[more]

BLAST of Pay0018212 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79350.1	2.3e-20	40.83	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G46020.1	1.0e-07	81.25	CONTAINS InterPro DOMAIN/s: Casein kinase substrate, phosphoprotein PP28 (InterP...	[more]
AT1G75440.1	6.5e-07	87.10	ubiquitin-conjugating enzyme 16	[more]
AT5G42990.1	4.2e-06	80.65	ubiquitin-conjugating enzyme 18	[more]
AT1G45050.1	7.2e-06	77.42	Ubiquitin-conjugating enzyme family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR039187	Strawberry notch, AAA domain	PFAM	PF13872	AAA_34	coord: 14..46 e-value: 1.1E-6 score: 27.7
IPR019380	Casein kinase substrate, phosphoprotein PP28	PFAM	PF10252	PP28	coord: 106..137 e-value: 8.6E-9 score: 35.8
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 107..197 e-value: 1.9E-5 score: 26.4
None	No IPR available	PANTHER	PTHR12706:SF13	PROTEIN STRAWBERRY NOTCH	coord: 14..88
IPR026741	Protein strawberry notch	PANTHER	PTHR12706	STRAWBERRY NOTCH-RELATED	coord: 14..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0018212.1	Pay0018212.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048583	regulation of response to stimulus
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0031490	chromatin DNA binding
molecular_function	GO:0042393	histone binding
molecular_function	GO:0046872	metal ion binding