Pay0018205 (gene) Melon (Payzawat) v1

Overview


Name	Pay0018205
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	polyadenylate-binding protein RBP47
Location	chr11: 5417153 .. 5427822 (-)
RNA-Seq Expression	Pay0018205
Synteny	Pay0018205

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTTAGGGCAAAAATTAATCTCCTTCTTCTGGATCTTGACTCGGGTTTTTGAAATATGTTATTTTAGAACTTTTGGTTTTGAATGAATACTTAACGGTGTAAATTTTCCGGTCAGCCACCAAGATCCACCACCGTCATCGCAGCCGCCGCAGCCCCATAATATTATTTTATTGGAAACGCTAACATTCACAATAAAACCTCTTTCTCATTCCCCCTTTCCTCCTCTTTCTCTCTCTCTCTTTCTCTCTAGTCTTCATTCAGCAGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAACCTGGTCTTGTTCCTTCACATCTAACCAGGGCCGTCGTCGCTCGTATATCTCGCCGGAGAGAGAGAGAAAAACGAAGGAGGCGGAGACGGAGACGGAAACAGAGTGACTTTGGAGATCATGGCTCAGCCTTCAAACGGTGCCGATCTCAATCCCCAGGCTCCTCATCCTCACCACCAATGGTTTCAACAACAACAACAGTATCAGCAGCAATGGATGGCGATGCAGTACCCTGCCGCCGCCATGGCCATGATGCACCAACAGCAGATGATGATGTATCCTCCTCAGCATTATATGGCGTATTCTCACCATCCTTATCAACAGCAACAACAGCAACAGCAGCAGCCGTCGTCGCAACAGCAGCAACAGCATGCTCAGTCGCAGAGACCTCGTAGACAGGGGTCAACGGACGAGGTTAAGACGCTCTGGATTGGCGACCTTCAGCCTTGGATGGACGAGACCTACCTCAATAATTGTTTCGCTCACACCGGCGAGGTCTAAACTTACTTGTCGTATTGAACTTTTATTTTTCACGTCTCTCTACCTCTATTTGTTGTTCGAGTTTCTGTAGATCGTTTCGAGACTTTCTGTAATGAGATCGATCGGATTTCTTTATCTTTTCTTGTGCGTTTGCGTTCTAGAATTGATTTGAAGTCTGTGAATCTGAGGTTGTTGACATTATTCTTGCTGCATCTTATATTGTTCTGAAACTGGATTGGTGGTCCAATACGAGTCTAGCCAATGTGAGAAGAATTGTTACTAAAGAGGGGGCGAGTTTTAGACTGATTTATTGTTGTATGAACATTTCTCTTTTTGCTTCCATTAACTCAAAAGAGGGACTAGGACTAGGACTAGTAATTTTCATTTTCATTTTAGAATGTGCTTTACTATACCTCTGTCCTTGTTTTGACACTTCAATTATTCGTGATATCTTAATGATAGAGGCAATTAGATCACAAGTAAATTAAATGCAATGAGTGACATTTGATTCACAACTAGGTAATTGCTATTTTCATACATAAGTAATTTAGATTATCAGAAGTGAGGATGTTTAGCAAGCACAAAGAGTCATGATCTGGTCATTTGGAATAATATGGAATAGTTGGAATTATAACTTTCATTTTTTAGATGCTAGAGACATGGCTATTTCCCACTTCATTCACACCTTTGCAAGGCCATTAAAATTTTTGTTTCCTTTCTCATGAAAAACATATTGTTTTAAATCAAAACATCTACGTTTAGTTTAAACTGAAATAATGCATGTTCTTTTCTGTGTTTCTTGTCTTAAAAGAACTTGCTGCTGAATTTTTCTTCATACAATGTATGATTGGTCTTCAGTGTCGTCGATTACTCTTCTGAAGGAATTAGTATGGTAATGTATAAGTATGATTATGATTACCATTTTTCTTACTTCATCTGTGCAGCATTTTTGGGTGACATCTTGCTTCCTTGCATATCTTGGTCAGTGTTTATATGGATACTTGCAGACTGTTAGGTTTGGTTCTTAGTTGAAGTTTCATATGTTCTTTTGGGCTTCGGTTCAAAGGTTTTCTGTAACTATTCTCTTGGTAACATTTTACTTAGTTGGAATGGAGCCCATTCCTTTAGTAGGGGTGTTTTTGTGGACTTGCTTTTTTCTCTGTCCTTTAATTGTTTCATTTTTTCTAAGTTGTTGTGTATATGAAAAAAAAATATGGATACCTCCTGACCGTCTTTTATATTTACCCTCGTCTAAATCAATGTCCATCTAGAACATCTTTTTTGGTCTTCAGTTGACTGAACTGTTTCTATTCTTTTGCTTCATAACACGCAGGTTTCCTCTGTTAAGGTTATATGCAATAAGCAAACTGGTCAATCGGAGGGCTATGGTTTTGTTGAGTTCTTCTCGCATACAACAGCCGAAAAAGTATTGCAGAATTATAATGGTACTATAATGCCTAATACAGAGCTGCCTTTCCGTCTCAATTGGGCAACCTTTAGTGCAAATGATAGGCGACCGGACGCTGGTTCTGACCTATCCATATTTGTTGGTGACTTGGCTGCCGATGTGACTGACGCTATGCTGCAAGAAACTTTTTCTAGTAGATACACATCTGTTAAAGGAGCAAAGGTGGTTATTGATTCAAATTCAGGTCGTTCAAAAGGTTACGGCTTTGTCAGGTTTGGTGATGAAAATGAAAGGACAAGGGCTATGGCTGAAATGAATGGGATATATTGTTCAAGTAGACCCATGCGCATTGGTGTTGCAACACCAAAGAAAGCATCTGGATATCAACAAGGTTACGCTTCGCAAGGTTAGTCTTTGTTCTTCTGGCATCACTGCTGGGTGGTGTTTCTAAGAAAATTGAAAATCTAGAAATCATCATATCTTACAGACTTCATGAATGAATGAGCTCATGTACCCCTATCCCTAGCACACACACACCTAACAAAAAGGCAATAAAAATGCAGAACCCAAAAATATACACGCAATTTACCTTTCAAAGTGGTTTTGTTTGCAAGCAACAAGATTAATAAATAAAAAGATGATGGTTATTACAGAAGCTTGTCATGTACAGCAGTCAAATTGTTTGCGATGGTACTTCTGACAGTTTATTACTTCGTTCTTTGAGTTTTATGGAATTACTTCAGCCACAAAAGGGTTGATGGTACTGAGGCTAGGGTCTTATCTTATTTTTGTATTTTCTGGAATTCTGCATTCCATTGATATACCTTTAGCAATGGATATATCTTCGCAATACAAGTTGAACACTTTTAGAATATGAAATCTCTTATATTAACACTTTTCAGGATTTTTCATTATTTATCCAGTGCTTCTTTTCTCCACTAAATCTTCCCCCTCTAAATGCTGAACCATCTCAACATTTTTGGTTTTCGAGTCCATTGATGAATAGTATTCTGTTTGTCTGGTCATGCTTTTTGGCACATTATTCTTTATTTTTGGAAATCCATGTTGGATTATATTGTAACTTTTCTGGTACTGGTTTTTCTTGGATGGAGAATTTCTTTTTCCTTTTATCTTTTCCCTCTTATCTTTTCCCTCCTGCTGCAATGATAAGTGAAGCGTCATTTTTCAAGAACCAGTCTACTGGCCAGTATTAATGTCGTTGGTTGTTTGCCAACTAGGAGAAGAAGGCTAGAACTAGAAGTGATTGATGTTTTCCATTGGCAGGAGGAGGATCTTGATCGTCTTTTGTGGGTTGGCACTTAGCAGTTTGTTTATTCCTCGTGAAGTCGGCTTTTGAGGGTTTGGGGTTGTGGTGGGTAATAGAATTGCCGCTCTAGCCTATATGTTGGAAGAGATACCGATGAACTCTTCCTTTTGTGATAAAGGAATAGTCCTTTGACAGGCTTGCTCTTTTGCTATTTTTTGGGGAGTATGACGTGAGAAGAATAGTAGAGTTTTTAGAAAGATCGAGAGGTCTTTGGAGAAGGTGTGGAAGGTTGTGAGGTTTATTAATGTGTTCATAAATTAGTTTTTCTATAGTTTTCAGCATGATGTTATTTTTTGAATTGAAGTCTGTTTATGTAGTTAAGGACTACTTTTGCAGCCTTGTTTTTTTTTATTTTTTTTTTATTTTTTATGCACTTATAAATTGTTTCATTTCTCTCCATGAAAGCTTGGTTTCTTATCTAAAAAAAGATTTGACATTTTAATATGATACGGGCATGGTTCTTTAGGCATCTGCCCCAGTATTATTTTCTTTTTCGCAAATGGCTTTTAGACATAAGCGTAAGGAACATGGATTGGACTTCTACCTCTTGTGGAGAAGATGTTCTACTAATTTATTGTGAAGTTATAAGGTGTAAATGTTATTTATTTGTTTTTTTTTTGTTGTTGAAGGAAACGGGCCTCTTTATTGATATAAGGTCTAAATGTTATTAAAATGTAATTTTTGTGTTTTCATTTTGTATGTTAGATGGGTGGTTGATTCTGATGCCAATTTCTGTCTTCTTTTATTTATATTTTATTTTATTTAGCTTTGGTACTGGCCGGTGGACATCCCAATGGCATGGCTGTTCAGGGTTCACAATCAGATAGCGAGTCAAACAACAACCAACTTGTGGTACCTCAGATATTTGTTGGTGGCCTCGATTCTGATGTTAGTGATGAAGATCTCAAGCTAGCTTTCTCTAAATTTGGTGACGTTATCTCTGTGAAAATTCCAATTGGAAAAGGATGTGGATTTGTGCAATTTGCTAACAGGTATTTTTCTTCTTTTTCTTTCGTTAAACATGCAGCTGTCGTGCTAATCTTTATATCTTCAAAGTAATTAGTGGTTACAAAATGAGAAGGTCACTGCTCAGGCACAAGTTGGACTGACCCATGAAATAGCAGTCAGTTTTGGCTTGCCATAGTAGTTGGCCATATTGGGTCTAAGATTTATGACCTATGTGCCTGTGATTTTTAAAATATGTCGAGTAGGTAGCTTGCTTTTCTTGAAAATTTGTAGGCATGTACTTATTTATTATAATAATTGTAGCTATATGTTTTTAGAAAGTAATGGCAAGTGGAACATTTTAAAAATGCCAAATTGACTTAGTCACTTGATAGTAATCACTTCTCTCTCTCTCCTCTCTTAATTTTTAAATATATATTATATTAAAAAGAAACTTTTTTGTTGTAAGCACCGATTTAATTAATCGATAATTAATTATTAACCTTGCCATTAATGGTTACTTCTTGTTTTTTGGTTGAATGCATATCTGTTTCCTATAAAAAAACGTCGTTAATAATTCCATTAATCATGGTAATCAGTCATTGACATGGGTTTTATTCTTTACCCTATTTAATATTATAATTTTTACGATTTACTATTTGTTATATTCCATATTAATTATTTTTGCTAAATATGTGTGTATGCATTTTGACAATATGTGGGTGGGAGATCAAACCTTGAGGTAATTGTACATATGTGTTGATTGAGCTATGCTCATTTTGCAATATTCTTGCAATATTTGATATTCATTAGGTTAATATTTTCAAGAGACCCTTAAAGGTAAGCACAGATGCCTGCAAGAATAAACAGCTAAAAAAAGTAGAATTTTAAGTCAAAAAACTTCAGAACATTTCAATCCATATTAAATTCATTTAATTTTTTGTATAAAAAATGTCCATAGCAAAAAGATAAAAAAAGAAAAAAAAACAGGGAGTGTACTAGGCCTATCACGAGAGTTATGCTTGGCCTTATGTTAGAGGATAGGCTCAAACCTACTGGGAGCCTAGGCCAGAACCAAGCTGTACGTTCTTGATGAGTGGCCTGGGCAACTTGTTTGTTCACACTATGAACGGTCATCTTAACATGTGAAAGGTTCTAATTTCTTGCAACTAACCTCCAGCCCCTAGTTTATTAGAAACTTTGAAAGTTTTATAGAACTCATATCTTGTCAATCCAGAGTGAGCTTTTACTAATTATTTCTCGTTCAGATTAGTCCAGTACTGATTGTTTCGAGGTTGTGTTATCAAGCAATTTCTAATTGTACCAAGAGTGAAATTGTGGATGGACATTTTAGTACTTACTTTCTTAGTCCGTGGCTCTTGCATGGATGGTTTCCTTGATAATTTCATTTGTTTTCTTTTTTGATTGGAAGAAAAGAAATAATCGAGGAACAACAGAAAGGCCTGGAAGGTGAGAAATTTTCTTTCCCCTTTCGTAATAGAAGGATTATACAAGTTAAGTTGCTATTGAAGAAGAATAGTTGCAACATATGTAGCATAAGGCTCTCTTCAATTTGAAGCTGTAAACTTGGCACTAAGGTCAGACGCGGGTGTTTATTTTTTAATCATACAACAAGCTACCTTTGCACGGTGTCTAAAATGCACATAACTGAACATTATTTGGGGAAGGAATAATGAAAGCCATTTTATTTTTTTCAGAAATCTTCCATCCCAAACAACTTAGCTGAGATATTCAGATCAAGCTTGGTCACCGGGTTTTATGAAAAAAATTGCCAAATCTGCAAGATTACAAACTCAGTCTTCCAATTTTGCAACTGTACCATCATTTTGGTTAAAACAAGATGATAGAGCTGTAAACTTGCAATCACTAGGTTTCATGTGGGCTCTAACCTGGGACTTCCGTTATGAAGTTTTTTTTATAGATTATTCACAGGTGTCATTTATAGGATTGGATGCCCTTTTTATAGAGGCGCTCCTTTTTGTGGGCTGGTTTTTTGAGCCCATATATTCTTTCATTTTATTTTCAATAAAAGGTTGTTTCTAAAATAAAAGACACTCCACTCCATGTGAGTTGTGAGAGAACTAAGCCAAGCTCATTGTCTAATAATTAATCAAAGAGATTCTTTCTAAAGGAATGAATGCGTTCTTTCATTTCCCCCTCCCCTTCAAGAATTTGTTTTCCCGATGAAGTTGATAATTCTTCTTCTTTTCTTTCCTCTTTTTGGAATGCTTTTAATGGTTTAAATTTGCAATTATTCGGTGATTGCTCATATGGGACAGATTTCGGTGCAAGATTGGTGCTGGTGGCTTGTCCGTATTCTTTTAGGCCCCTATTGCTTATATAATAGGTAGACAACAAACTTGAAAAAGGAAAATTTCATATTCTCAAAGGAGGCTAGTCTTAATTACAATCATACGAGTGACATCCATGGATTTTGAGGTACACATGGAGAAGAGTCATCATGGCCAAATTTGGCTCTTACCCATGGATACTTGGCTGGATTCATTTTCCTTGTACCTCGTCTAAAGTTCCTTGGAAATCTATTCTTAAGCATAAGGATCGAACAAGAGCTTGATGCCCAACAACTCTTCCACCAGCTTTGGACTGGACTTTTGGATCAGAAGTGAACTGCTATTCAAGTTGTTTCATGCTTTTTAGACCCTTTTCTCCTTCCAACAGGGCATGAGATACATGGAACACTCCGCACATAATTACAATCTCAACATTCGAAGACAACTCTTTTTGGAGGAAGCTTTCACTCAGTGTGGGATTCCCTAACAGATTCGCTTTCACCATCTCACTTCCCAGATGATCCAGATGGCTCCTAGAACTAGAACCTTGCAGCTTCTTCTTGGTTTGCTTCCTCTTCAATGAACTATTAAAAAAACAAGGTTGTTTTTGCTCCTCTCTTTGTAGTGTTCAGTGGACATACATATGCAAGTTCATGAAAAAAGTTTAGTTTTGATAGGAAATTAATCTCGAGAGCATTCTATTAACACACAAGATGATGCCGAATCAAAATCCAGCATGAGATCTCTCTAGGATGGTGTATCTTATCTTATGCATGCAAGGGATAGACACACAAGGCAACCTATTCCTCAATTGTCCCTTTGCCAACAAATACTAGTCCTATATTCTGTCTTCCTTCAAATGTCACATAGCAACGAATTGACAACCGCTGAATGCTGAGTGTCTTTTCAGTGACTCGTATAGCTTGCTCTTCAATGTTTCAACTTAGACTCTCCCTAAGCTTGAGCTCTCCCCATTTCCACAATATGCTTCTTCAAGTTTTGTATGAGATCCCCTCGATACAATATGCTTAGGCTCCCCTTAAATACAATATTAATATGAAACTCTTCTCGAGTTCTACAATGGCTACTGGACCAAATAGTCTTAGTGACAAACACAACAATTTCTCACTATTAATACGTGAAGGTTGGGCTTTAGACAATCCCTAAGCTCAAAACATTCAAGCATTCACTTTTTTGATGAGGCACCTAACCCTAAAAAGTATAGAGTAACATATATATATATATATATATATATATATACATATACATATATATATATATATATACATATATACATATAGATACATATATAGACATATATACATATAGATACATATATAGACATATATACATATATATACATAATACTAGACAATATATTAGACATGTAATATAGACATATATATAGACATATATATAACATATAGGACAGTATATATAGCATTATATATATAATATCTATTATATATATATTCATATATATATATATAGACATATATAGACATATATATAGACATATACTATATATATATAGTATACATATATGACTATATATATATATATATATAGCTAACTTATAGAATATTCATTTAGGAGATAATTAAATATTATTTGTAGGAAAATAAAGGCTAAAGATATATCGGAGAATCAATGCTCCATGAAATCTGCAAATCAATCTTTCATATATGGAAAAAATATTTTGTTGAATGTTTGTCGTTGACATGTTGTCTAGCATGTTGCTCAAATTTGCCTTTAATAAAATCAGCCAACCAATGCATTAACTTAACTCTTAATACAACTAATTAATACCAGATTAACTAATTTATAACAGAAACTATAACTATACATGATAACAGTGTCTTCATACATTTTTTCTTCCCTTTTTGTAGAAAGAATGCTGAGGATGCATTACAGGGACTGAATGGAACAGTTATAGGGAAGCAAACTGTTCGTCTTTCTTGGGGCCGAAGTACAGGGAACAAGCAGGTCTGATCCTATGCTTTTTACTCGTCTTATGAATACTTTTGGATTATTAGCTGTTAACATATGACCTCTAGGACCTTTAGAAAACAAGAGTAGAAATGAAATTTGATGACTATGCATATAGAACTAGCCACTATATCACTTATATGGCGTGGGGATATGGATATCTGATCTTTCCTCCTTTCTTCTCTATTAAAAAATCACATTTGTTGATTTCATCTTAGATATTTTGATACTCTAATATCTAATGAACCTGTAGACCAACTTTGAATATATGTCAAGAATTTATTGGATAAAAGGAATAATGGATGTAAAAAGAAATACAAGGGAACTTATAAATTTAGAGGGTAAAAATATTGAACTTGTTTCTAAGCTAATAAGCATAATGAAGTTATGAATATTGATTTTTTGGACAGTCTACTTGATGTTGAATTACCTAGAGATATGTTTATGTAGGTCTTTTTTCCCTTCTTTTTTAAATCTTTTGACCTTCATGAGGCACTTATCATACTGTTTGTAATCAGTTTCTTCAACCTATTGATTTAATTGTTCACATTTCATGACTTGTTTCACACTCTGCACCATTGTCAGTCTGGCATCTTTCTCTTTGACCTCTCCTCATAGCAGCAATAGTTGTAGCCTTTTTCTTAGCTATTATGAAAATATTTTTTTGAGGGTATTTTACCTTCAAAGGCCTTTGAAGATGAACTACAAATATTTTGGGTATGTTTAGTAGGCAATTTAGATTCTTATGTTGATTTTACAGAATATCTGTTTTATAAGTTGTTTGGATTTTGTTTTTTAAAACTGTTTACTGTATTATCCAAACAAAACAACTTCTCAAAACAATATTAGTATGTTTTCAACGTTTTCAGAACTTGGAATTTGAAATTTTAAGATGTAAAATTGTCTTAAAAAAGCTTAAAAAATATTAATAAATATAGTAGTTCATCTTATAAATTGAATTATTTTTGCTAAATGAAATATCTATTATATAATATTATAAATTATATATATTACAAAATGATAACTATACAAAAGTTCCATTAATCAATTAATAACAATTTATATCACATAATATTCAGCGAGTAACTATAATTAGTTTATAGTTTGTAAAAATACTATAAACACATTGTTATGGAATTTCTAAATCTTCAACCAAACAAATATTTGAAAAGAATTTTATTTTCATTAAATCCCTTGTTTCCAAAACTCCGCCAAACAAGTCTTTTTTTTTTCTCTTCTCAATTTTCATTTCTCTTTTTCGTTTGGGAAAAAAAAAGGATCATCTTTCAACCTTTTTCAAAATACTTGATTTAATAATGGCAGTGGAGAGGTGATTCAAATAACCAATGGAATGGTGGACGTTATGGTGGGCAAAGCTATGGTGGATATGGTGGCTATTACTCTGTACCACAGCATCAGGACCCAAACATTCATCCCACAGCTGCTGCTGCTGCTGCTGCAGTTAATGGCTCATCTTGAGATGAGAAGAATATGACCATTGCCACCATTGAACTGAAATTCTGAGCCTTCAAAACACCAATCTCTTAGCTATAAATATATATATATATATATAAAATATAATTATATATTTGACTTGGTAATAGAGAGAACATATTTAAGTTGTGGTTAGCCGAATCTTTTATTTGATTAATCATATGGCTTGATAACATTTATTTTACTTCCTTGCTTGAGAGTCTTATAGACTGCCTGTAGGCTTTAGCTCATCTGAACAATTTTGGGGTATGTGGGTGGATTTTTCTTGGCTTAGGGGGTATTTTTTATTTTTTATTTTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATTATTATTATTTAGGTTTATTTCAGTTAGTTATAGATGCTTTTATTTGAACCATAATCCTTGAATGGCATGAATT

mRNA sequence

ATTTTTAGGGCAAAAATTAATCTCCTTCTTCTGGATCTTGACTCGGGTTTTTGAAATATGTTATTTTAGAACTTTTGGTTTTGAATGAATACTTAACGGTGTAAATTTTCCGGTCAGCCACCAAGATCCACCACCGTCATCGCAGCCGCCGCAGCCCCATAATATTATTTTATTGGAAACGCTAACATTCACAATAAAACCTCTTTCTCATTCCCCCTTTCCTCCTCTTTCTCTCTCTCTCTTTCTCTCTAGTCTTCATTCAGCAGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAACCTGGTCTTGTTCCTTCACATCTAACCAGGGCCGTCGTCGCTCGTATATCTCGCCGGAGAGAGAGAGAAAAACGAAGGAGGCGGAGACGGAGACGGAAACAGAGTGACTTTGGAGATCATGGCTCAGCCTTCAAACGGTGCCGATCTCAATCCCCAGGCTCCTCATCCTCACCACCAATGGTTTCAACAACAACAACAGTATCAGCAGCAATGGATGGCGATGCAGTACCCTGCCGCCGCCATGGCCATGATGCACCAACAGCAGATGATGATGTATCCTCCTCAGCATTATATGGCGTATTCTCACCATCCTTATCAACAGCAACAACAGCAACAGCAGCAGCCGTCGTCGCAACAGCAGCAACAGCATGCTCAGTCGCAGAGACCTCGTAGACAGGGGTCAACGGACGAGGTTAAGACGCTCTGGATTGGCGACCTTCAGCCTTGGATGGACGAGACCTACCTCAATAATTGTTTCGCTCACACCGGCGAGGTTTCCTCTGTTAAGGTTATATGCAATAAGCAAACTGGTCAATCGGAGGGCTATGGTTTTGTTGAGTTCTTCTCGCATACAACAGCCGAAAAAGTATTGCAGAATTATAATGGTACTATAATGCCTAATACAGAGCTGCCTTTCCGTCTCAATTGGGCAACCTTTAGTGCAAATGATAGGCGACCGGACGCTGGTTCTGACCTATCCATATTTGTTGGTGACTTGGCTGCCGATGTGACTGACGCTATGCTGCAAGAAACTTTTTCTAGTAGATACACATCTGTTAAAGGAGCAAAGGTGGTTATTGATTCAAATTCAGGTCGTTCAAAAGGTTACGGCTTTGTCAGGTTTGGTGATGAAAATGAAAGGACAAGGGCTATGGCTGAAATGAATGGGATATATTGTTCAAGTAGACCCATGCGCATTGGTGTTGCAACACCAAAGAAAGCATCTGGATATCAACAAGGTTACGCTTCGCAAGCTTTGGTACTGGCCGGTGGACATCCCAATGGCATGGCTGTTCAGGGTTCACAATCAGATAGCGAGTCAAACAACAACCAACTTGTGGTACCTCAGATATTTGTTGGTGGCCTCGATTCTGATGTTAGTGATGAAGATCTCAAGCTAGCTTTCTCTAAATTTGGTGACGTTATCTCTGTGAAAATTCCAATTGGAAAAGGATGTGGATTTGTGCAATTTGCTAACAGAAAGAATGCTGAGGATGCATTACAGGGACTGAATGGAACAGTTATAGGGAAGCAAACTGTTCGTCTTTCTTGGGGCCGAAGTACAGGGAACAAGCAGTGGAGAGGTGATTCAAATAACCAATGGAATGGTGGACGTTATGGTGGGCAAAGCTATGGTGGATATGGTGGCTATTACTCTGTACCACAGCATCAGGACCCAAACATTCATCCCACAGCTGCTGCTGCTGCTGCTGCAGTTAATGGCTCATCTTGAGATGAGAAGAATATGACCATTGCCACCATTGAACTGAAATTCTGAGCCTTCAAAACACCAATCTCTTAGCTATAAATATATATATATATATATAAAATATAATTATATATTTGACTTGGTAATAGAGAGAACATATTTAAGTTGTGGTTAGCCGAATCTTTTATTTGATTAATCATATGGCTTGATAACATTTATTTTACTTCCTTGCTTGAGAGTCTTATAGACTGCCTGTAGGCTTTAGCTCATCTGAACAATTTTGGGGTATGTGGGTGGATTTTTCTTGGCTTAGGGGGTATTTTTTATTTTTTATTTTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATTATTATTATTTAGGTTTATTTCAGTTAGTTATAGATGCTTTTATTTGAACCATAATCCTTGAATGGCATGAATT

Coding sequence (CDS)

ATGGCTCAGCCTTCAAACGGTGCCGATCTCAATCCCCAGGCTCCTCATCCTCACCACCAATGGTTTCAACAACAACAACAGTATCAGCAGCAATGGATGGCGATGCAGTACCCTGCCGCCGCCATGGCCATGATGCACCAACAGCAGATGATGATGTATCCTCCTCAGCATTATATGGCGTATTCTCACCATCCTTATCAACAGCAACAACAGCAACAGCAGCAGCCGTCGTCGCAACAGCAGCAACAGCATGCTCAGTCGCAGAGACCTCGTAGACAGGGGTCAACGGACGAGGTTAAGACGCTCTGGATTGGCGACCTTCAGCCTTGGATGGACGAGACCTACCTCAATAATTGTTTCGCTCACACCGGCGAGGTTTCCTCTGTTAAGGTTATATGCAATAAGCAAACTGGTCAATCGGAGGGCTATGGTTTTGTTGAGTTCTTCTCGCATACAACAGCCGAAAAAGTATTGCAGAATTATAATGGTACTATAATGCCTAATACAGAGCTGCCTTTCCGTCTCAATTGGGCAACCTTTAGTGCAAATGATAGGCGACCGGACGCTGGTTCTGACCTATCCATATTTGTTGGTGACTTGGCTGCCGATGTGACTGACGCTATGCTGCAAGAAACTTTTTCTAGTAGATACACATCTGTTAAAGGAGCAAAGGTGGTTATTGATTCAAATTCAGGTCGTTCAAAAGGTTACGGCTTTGTCAGGTTTGGTGATGAAAATGAAAGGACAAGGGCTATGGCTGAAATGAATGGGATATATTGTTCAAGTAGACCCATGCGCATTGGTGTTGCAACACCAAAGAAAGCATCTGGATATCAACAAGGTTACGCTTCGCAAGCTTTGGTACTGGCCGGTGGACATCCCAATGGCATGGCTGTTCAGGGTTCACAATCAGATAGCGAGTCAAACAACAACCAACTTGTGGTACCTCAGATATTTGTTGGTGGCCTCGATTCTGATGTTAGTGATGAAGATCTCAAGCTAGCTTTCTCTAAATTTGGTGACGTTATCTCTGTGAAAATTCCAATTGGAAAAGGATGTGGATTTGTGCAATTTGCTAACAGAAAGAATGCTGAGGATGCATTACAGGGACTGAATGGAACAGTTATAGGGAAGCAAACTGTTCGTCTTTCTTGGGGCCGAAGTACAGGGAACAAGCAGTGGAGAGGTGATTCAAATAACCAATGGAATGGTGGACGTTATGGTGGGCAAAGCTATGGTGGATATGGTGGCTATTACTCTGTACCACAGCATCAGGACCCAAACATTCATCCCACAGCTGCTGCTGCTGCTGCTGCAGTTAATGGCTCATCTTGA

Protein sequence

MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATFSANDRRPDAGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQGSQSDSESNNNQLVVPQIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANRKNAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQHQDPNIHPTAAAAAAAVNGSS

Homology

[Close]

BLAST of Pay0018205 vs. ExPASy Swiss-Prot
Match: Q0WW84 (Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B PE=1 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 2.6e-138
Identity = 281/442 (63.57%), Postives = 328/442 (74.21%), Query Frame = 0


Query: 3   QPSNGADL----------NPQAPHPHHQWFQQQQQYQQQWM-AMQY-PAAAMAMMHQQQM 62
           Q +NG+D           N Q P P  QW QQQQQ QQQWM AMQY PAAAM MM QQQM
Sbjct: 2   QTTNGSDSTLATSGATPPNQQTPPPPQQW-QQQQQQQQQWMAAMQYPPAAAMMMMQQQQM 61

Query: 63  MMYPPQHYMAYSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPW 122
           +MYP Q Y+ Y+  PYQQ   Q  Q  S QQ QH Q +   R GS D+VKTLW+GDL  W
Sbjct: 62  LMYPHQ-YVPYNQGPYQQHHPQLHQYGSYQQHQHQQHKAIDR-GSGDDVKTLWVGDLLHW 121

Query: 123 MDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTE 182
           MDETYL++CF+HTGEVSSVKVI NK T QSEGYGFVEF S   AE+VLQNY+G++MPN++
Sbjct: 122 MDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSD 181

Query: 183 LPFRLNWATFSANDRRP-DAGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDS 242
            PFR+NWA+FS  ++R  + G DLS+FVGDL+ DVTD +L ETFS RY SVK AKVVIDS
Sbjct: 182 QPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDS 241

Query: 243 NSGRSKGYGFVRFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVL 302
           N+GRSKGYGFVRFGDENER+RA+ EMNG YCS+R MR+G+ATPK+A   QQ ++SQA++L
Sbjct: 242 NTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVIL 301

Query: 303 AGGH-PNGMAVQGSQSDSESNNNQLVVPQIFVGGLDSDVSDEDLKLAFSKFGDVISVKIP 362
           AGGH  NG    GSQSD ES N       IFVGG+D DV DEDL+  FS+FG+V+SVKIP
Sbjct: 302 AGGHGSNGSMGYGSQSDGESTN-----ATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIP 361

Query: 363 IGKGCGFVQFANRKNAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYG 422
           +GKGCGFVQFA+RK+AEDA++ LNGTVIGK TVRLSWGRS  NKQWRGDS  QWNGG   
Sbjct: 362 VGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NKQWRGDSGQQWNGGYSR 421

Query: 423 GQSYGGYGGYYSVPQHQDPNIH 431
           G  Y   GGY +   H   N H
Sbjct: 422 GHGYNNGGGYAN--HHDSNNYH 432

[Close]

BLAST of Pay0018205 vs. ExPASy Swiss-Prot
Match: Q9LEB3 (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP47 PE=1 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 1.0e-137
Identity = 270/443 (60.95%), Postives = 333/443 (75.17%), Query Frame = 0


Query: 6   NGADLNPQAPHPHHQWFQQQ------QQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYM 65
           NG D+N Q      Q  QQQ      QQYQQQWMAMQYPAAAMAM   QQ MMY  Q+  
Sbjct: 2   NGGDMNQQQQQQQQQHQQQQQQWLAMQQYQQQWMAMQYPAAAMAM---QQQMMYGQQYMP 61

Query: 66  AYSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNC 125
            Y  H  QQQQ+ QQ P+             + Q S+++ KT+WIGDLQ WMDE+YL++C
Sbjct: 62  YYQQH--QQQQKMQQSPT-------------QIQSSSEDNKTIWIGDLQQWMDESYLHSC 121

Query: 126 FAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWAT 185
           F+  GEV SVK+I NKQTGQSE YGFVEF +H  AEKVLQ+YNGT+MPNTE PFRLNWA 
Sbjct: 122 FSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQSYNGTMMPNTEQPFRLNWAG 181

Query: 186 FSANDRRPDAGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGF 245
           FS  ++R + GSD SIFVGDLA+DVTD ML++TF+SRY S+KGAKVV+D+N+G SKGYGF
Sbjct: 182 FSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGF 241

Query: 246 VRFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGH-PNGMA 305
           VRFGDE+ER+RAM EMNG+YCSSR MRIGVATPKK S ++Q Y+SQA++L+GG+  NG A
Sbjct: 242 VRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKPSAHEQ-YSSQAVILSGGYASNGAA 301

Query: 306 VQGSQSDSESNNNQLVVPQIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQF 365
             GSQSD +S+N       IFVGGLDS+V+DE+L+ +F++FG+V+SVKIP GKGCGFVQF
Sbjct: 302 THGSQSDGDSSNT-----TIFVGGLDSEVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQF 361

Query: 366 ANRKNAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGY 425
           ++R +A++A+Q L+G +IGKQ VRLSWGRS  NKQ R DS +QWNGG  G Q+YGGYG  
Sbjct: 362 SDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRTDSGSQWNGGYNGRQNYGGYG-- 418

Query: 426 YSVPQHQDPNIHPTAAAAAAAVN 442
           Y   Q+QD  ++ T AA  A+ N
Sbjct: 422 YGASQNQDSGMYATGAAYGASSN 418

[Close]

BLAST of Pay0018205 vs. ExPASy Swiss-Prot
Match: F4I3B3 (Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A PE=2 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 5.5e-136
Identity = 280/428 (65.42%), Postives = 320/428 (74.77%), Query Frame = 0


Query: 13  QAPHPHHQWFQQQQQYQQQWMA--MQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQQ 72
           Q+  P  Q  QQQ Q QQQWMA   QYPAAAMAMM QQQMMMYP   Y  Y+   YQQ  
Sbjct: 29  QSTPPPQQQQQQQWQQQQQWMAAMQQYPAAAMAMMQQQQMMMYPHPQYAPYNQAAYQQHP 88

Query: 73  QQQQQPSSQQQQQHAQSQRPRRQGS-TDEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSV 132
           Q Q     QQQQQH QSQ+  R GS  D+VKTLW+GDL  WMDETYL+ CF+HT EVSSV
Sbjct: 89  QFQYAAYQQQQQQHHQSQQQPRGGSGGDDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSV 148

Query: 133 KVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATFSANDRR-PD 192
           KVI NKQT QSEGYGFVEF S + AE+ LQ+++G  MPN E PFRLNWA+FS  ++R  +
Sbjct: 149 KVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEKRASE 208

Query: 193 AGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENER 252
            G DLSIFVGDLA DV+DA+L ETF+ RY SVKGAKVVIDSN+GRSKGYGFVRFGDENER
Sbjct: 209 NGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENER 268

Query: 253 TRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQGSQSDSES 312
           +RAM EMNG +CSSR MR+G+ATPK+A+ Y Q   SQAL LAGGH       GS SD ES
Sbjct: 269 SRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGG----NGSMSDGES 328

Query: 313 NNNQLVVPQIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANRKNAEDAL 372
           NN+      IFVGGLD+DV++EDL   FS FG+V+SVKIP+GKGCGFVQFANR++AE+A+
Sbjct: 329 NNS-----TIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAI 388

Query: 373 QGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQHQDPN 432
             LNGTVIGK TVRLSWGRS  NKQWR DS NQWNGG   GQ Y    GY     +QD N
Sbjct: 389 GNLNGTVIGKNTVRLSWGRSP-NKQWRSDSGNQWNGGYSRGQGYN--NGY----ANQDSN 440

Query: 433 IHPTAAAA 437
           ++ TAAAA
Sbjct: 449 MYATAAAA 440

[Close]

BLAST of Pay0018205 vs. ExPASy Swiss-Prot
Match: Q9SX80 (Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C' PE=2 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 1.6e-106
Identity = 234/432 (54.17%), Postives = 277/432 (64.12%), Query Frame = 0


Query: 6   NGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHP 65
           N    +P  P PH             W  M+YP   M        MMY P   M +S  P
Sbjct: 39  NQPKTSPTPPPPH-------------W--MRYPPVLM------PQMMYAPPPPMPFS--P 98

Query: 66  YQQQQQQQQQPSSQQQQQHAQSQRPRRQGS-TDEVKTLWIGDLQPWMDETYLNNCF--AH 125
           Y Q               H QS+  + Q +   E KT+W+GDLQ WMDE YLN+ F  A 
Sbjct: 99  YHQY--------PNHHHFHHQSRGNKHQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAE 158

Query: 126 TGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATFSA 185
             E+ S+KVI NK  G SEGYGFVEF SH  A+KVLQ +NG  MPNT+ PFRLNWA+FS 
Sbjct: 159 EREIVSLKVIRNKHNGSSEGYGFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWASFST 218

Query: 186 NDRR-PDAGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVR 245
            ++R  + G DLSIFVGDLA DV+DA+L ETFS +Y SVK AKVV+D+N+GRSKGYGFVR
Sbjct: 219 GEKRLENNGPDLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVR 278

Query: 246 FGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQG 305
           FGDENERT+AM EMNG+ CSSR MRIG ATP+K +GYQQ          GG+    A   
Sbjct: 279 FGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQ---------QGGYMPSGAFTR 338

Query: 306 SQSDSESNNNQLVVPQIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANR 365
           S+ D+       +   IFVGGLDS V+DEDLK  FS+FG+++SVKIP+GKGCGFVQF NR
Sbjct: 339 SEGDT-------INTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNR 398

Query: 366 KNAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSV 425
            NAE+AL+ LNGTVIGKQTVRLSWGR+  NKQ R    NQW    YGGQ Y GYG  Y V
Sbjct: 399 PNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYGGQFYNGYG--YMV 420

Query: 426 PQHQDPNIHPTA 434
           PQ  DP ++P A
Sbjct: 459 PQ-PDPRMYPAA 420

[Close]

BLAST of Pay0018205 vs. ExPASy Swiss-Prot
Match: Q9SX79 (Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C PE=2 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 2.1e-103
Identity = 230/438 (52.51%), Postives = 282/438 (64.38%), Query Frame = 0


Query: 9   DLNPQAPHPHHQWFQQQQQYQQQ--------WMAMQYPAAAMAMMHQQQMMMYPPQHYMA 68
           D  P  P P  Q   ++++ Q +        W  M+YP   + + HQ   MMY P  +  
Sbjct: 20  DNQPPPPPPPPQQPAKEEENQPKTSPTPPPHW--MRYPPTVI-IPHQ---MMYAPPPFPP 79

Query: 69  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGS-TDEVKTLWIGDLQPWMDETYLNNC 128
           Y  +P                  H QS+  + Q +   E KT+W+GDL  WMDE YLN+ 
Sbjct: 80  YHQYP-------------NHHHLHHQSRGNKHQNAFNGENKTIWVGDLHHWMDEAYLNSS 139

Query: 129 FA--HTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNW 188
           FA     E+ SVKVI NK  G SEGYGFVEF SH  A+KVL+ +NGT MPNT+ PFRLNW
Sbjct: 140 FASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNW 199

Query: 189 ATFSANDRR-PDAGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKG 248
           A+FS  ++R  + G DLSIFVGDL+ DV+D +L ETFS +Y SVK AKVV+D+N+GRSKG
Sbjct: 200 ASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKG 259

Query: 249 YGFVRFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGH-PN 308
           YGFVRFGDENERT+AM EMNG+ CSSR MRIG ATP+K +GYQQ          GG+ PN
Sbjct: 260 YGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQ---------QGGYMPN 319

Query: 309 GMAVQGSQSDSESNNNQLVVPQIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGF 368
           G   +            ++   IFVGGLDS V+DEDLK  F++FG+++SVKIP+GKGCGF
Sbjct: 320 GTLTR--------PEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCGF 379

Query: 369 VQFANRKNAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGY 428
           VQF NR NAE+AL+ LNGTVIGKQTVRLSWGR+  NKQ R    NQW    YGGQ Y GY
Sbjct: 380 VQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYGGQFYNGY 418

Query: 429 GGYYSVPQHQDPNIHPTA 434
           G  Y VPQ  DP ++P A
Sbjct: 440 G--YMVPQ-PDPRMYPAA 418

[Close]

BLAST of Pay0018205 vs. ExPASy TrEMBL
Match: A0A1S3C9N4 (polyadenylate-binding protein RBP47 OS=Cucumis melo OX=3656 GN=LOC103498402 PE=4 SV=1)

HSP 1 Score: 853.6 bits (2204), Expect = 3.7e-244
Identity = 436/444 (98.20%), Postives = 436/444 (98.20%), Query Frame = 0


Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMA 60
           MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMA
Sbjct: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMA 60

Query: 61  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF 120
           YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF
Sbjct: 61  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF 120

Query: 121 AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATF 180
           AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATF
Sbjct: 121 AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATF 180

Query: 181 SANDRRPDAGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV 240
           SANDRRPD GSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV
Sbjct: 181 SANDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV 240

Query: 241 RFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQ 300
           RFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQ
Sbjct: 241 RFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQ 300

Query: 301 GSQSDSESNNNQLVVPQIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFAN 360
           GSQSDSESNN       IFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFAN
Sbjct: 301 GSQSDSESNNT-----TIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFAN 360

Query: 361 RKNAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYS 420
           RKNAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYS
Sbjct: 361 RKNAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYS 420

Query: 421 VPQHQDPNIHPTAAAAAAAVNGSS 445
           VPQHQDPNIHPTAAAAAAAVNGSS
Sbjct: 421 VPQHQDPNIHPTAAAAAAAVNGSS 439

[Close]

BLAST of Pay0018205 vs. ExPASy TrEMBL
Match: A0A6J1JGT7 (polyadenylate-binding protein RBP47-like OS=Cucurbita maxima OX=3661 GN=LOC111484248 PE=4 SV=1)

HSP 1 Score: 765.8 bits (1976), Expect = 1.0e-217
Identity = 391/444 (88.06%), Postives = 408/444 (91.89%), Query Frame = 0


Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMA 60
           MAQPSNGADLNPQAPHPH QWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYM 
Sbjct: 1   MAQPSNGADLNPQAPHPHQQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMT 60

Query: 61  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF 120
           YSH PY    QQQ  P  QQQQQ AQSQRPRRQGSTDEVKTLWIGDLQPWMDETYL+NCF
Sbjct: 61  YSHLPY----QQQPPPLQQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNCF 120

Query: 121 AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATF 180
           AH GEV SVKVICNKQTGQSEGYGFVEF+SH TA+KVLQNYNG IMPNT+LPFRLNWATF
Sbjct: 121 AHIGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTDLPFRLNWATF 180

Query: 181 SANDRRPDAGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV 240
           S +DRRPD GSDLSIFVGDLAADVTDAMLQETFSS+YTSVKGAKVVIDSNSGRSKGYGFV
Sbjct: 181 SGSDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFV 240

Query: 241 RFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQ 300
           RFGDE+ERTRA+ EMNGIYCSSRPMRIGVATPKKASGYQQGY+SQALVLAGGH NGMAVQ
Sbjct: 241 RFGDESERTRAVTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQ 300

Query: 301 GSQSDSESNNNQLVVPQIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFAN 360
           GSQSD ESNN       IFVGGLDSDVSDEDL+  FSKFG+++SVKIPIGKGCGFVQFAN
Sbjct: 301 GSQSDGESNNT-----TIFVGGLDSDVSDEDLRQPFSKFGEIVSVKIPIGKGCGFVQFAN 360

Query: 361 RKNAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYS 420
           RKNAEDA+QGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQ YGGYGGYYS
Sbjct: 361 RKNAEDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQGYGGYGGYYS 420

Query: 421 VPQHQDPNIHPTAAAAAAAVNGSS 445
           +PQHQD N+H    AAAAAVNG+S
Sbjct: 421 IPQHQDANMH----AAAAAVNGTS 431

[Close]

BLAST of Pay0018205 vs. ExPASy TrEMBL
Match: A0A6J1FUF1 (polyadenylate-binding protein RBP47-like OS=Cucurbita moschata OX=3662 GN=LOC111448515 PE=4 SV=1)

HSP 1 Score: 760.0 bits (1961), Expect = 5.6e-216
Identity = 390/444 (87.84%), Postives = 407/444 (91.67%), Query Frame = 0


Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMA 60
           MAQPSNGADLNPQAPHPH QWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYM 
Sbjct: 1   MAQPSNGADLNPQAPHPHQQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMT 60

Query: 61  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF 120
           YSH PY     QQQ P  QQQQQ AQSQRPRRQGSTDEVKTLWIGDLQPWMDETYL+NCF
Sbjct: 61  YSHLPY-----QQQPPPLQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNCF 120

Query: 121 AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATF 180
           AH GEV SVKVICNKQTGQSEGYGFVEF+SH TA+KVLQNYNG IMPNT+LPFRLNWATF
Sbjct: 121 AHIGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTDLPFRLNWATF 180

Query: 181 SANDRRPDAGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV 240
           S +DRRPD GSDLSIFVGDLAADVTDAMLQETFSS+YTSVKGAKVVIDSNSGRSKGYGFV
Sbjct: 181 SGSDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFV 240

Query: 241 RFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQ 300
           RFGDE+ERTRA+ EMNGIYCSSRPMRIGVATPKKASGYQQGY+SQALVLAGGH NGMAVQ
Sbjct: 241 RFGDESERTRAVTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQ 300

Query: 301 GSQSDSESNNNQLVVPQIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFAN 360
           GSQSD ESNN       IFVGGLDSDVSDEDL+  FSKFG+++SVKIPIGKGCGFVQFAN
Sbjct: 301 GSQSDGESNNT-----TIFVGGLDSDVSDEDLRQPFSKFGEIVSVKIPIGKGCGFVQFAN 360

Query: 361 RKNAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYS 420
           RKNAEDA+QGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQ YGGYGGYY 
Sbjct: 361 RKNAEDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQGYGGYGGYY- 420

Query: 421 VPQHQDPNIHPTAAAAAAAVNGSS 445
           +PQHQD N+H    AAAAAVNG+S
Sbjct: 421 IPQHQDANMH----AAAAAVNGTS 429

[Close]

BLAST of Pay0018205 vs. ExPASy TrEMBL
Match: A0A6J1D3C6 (polyadenylate-binding protein RBP47 OS=Momordica charantia OX=3673 GN=LOC111017220 PE=4 SV=1)

HSP 1 Score: 754.2 bits (1946), Expect = 3.1e-214
Identity = 390/444 (87.84%), Postives = 405/444 (91.22%), Query Frame = 0


Query: 2   AQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAY 61
           AQPSNGADLNPQ PHPHHQWF QQQQYQQQWMAMQYPAAAMAMM QQQMMMYPPQHYMAY
Sbjct: 3   AQPSNGADLNPQPPHPHHQWF-QQQQYQQQWMAMQYPAAAMAMMQQQQMMMYPPQHYMAY 62

Query: 62  SHHPYQQQQQQQQQPSSQQQQQHAQSQRPRR-QGSTDEVKTLWIGDLQPWMDETYLNNCF 121
           SHHPYQQQQQQ      QQQQQ AQ QRPRR QGSTDEVKTLWIGDLQPWMDETYL++CF
Sbjct: 63  SHHPYQQQQQQ-----PQQQQQQAQPQRPRRLQGSTDEVKTLWIGDLQPWMDETYLHSCF 122

Query: 122 AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATF 181
            HTGEV SVKVICNKQTGQSEGYGFVEF+SH TA+KVLQNYNG IMPNTELPFRLNWATF
Sbjct: 123 VHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTELPFRLNWATF 182

Query: 182 SANDRRPDAGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV 241
           SA DRRPD GSDLSIFVGDLAADVTDAMLQETFSSR+TSVKGAKVVIDSNSGRSKGYGFV
Sbjct: 183 SATDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRFTSVKGAKVVIDSNSGRSKGYGFV 242

Query: 242 RFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQ 301
           RFGDENERTRAM EMNG+YCSSRPMRIGVATPKKASGYQQGY+SQALVLAGGH NGMAVQ
Sbjct: 243 RFGDENERTRAMTEMNGVYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQ 302

Query: 302 GSQSDSESNNNQLVVPQIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFAN 361
           GSQ D ESNN       IFVGGLDSDVSDEDL+  FSKFG+++SVKIPIGKGCGFVQFAN
Sbjct: 303 GSQPDGESNNT-----TIFVGGLDSDVSDEDLRQPFSKFGEIVSVKIPIGKGCGFVQFAN 362

Query: 362 RKNAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYS 421
           RKNAEDA+QGLNGTVIGKQT+RLSWGRSTGNKQWRGDSNNQWNGGRYGGQ YGGY GYYS
Sbjct: 363 RKNAEDAIQGLNGTVIGKQTIRLSWGRSTGNKQWRGDSNNQWNGGRYGGQGYGGYSGYYS 422

Query: 422 VPQHQDPNIHPTAAAAAAAVNGSS 445
           VPQHQD N++   A AAA VNGSS
Sbjct: 423 VPQHQDTNMN---ATAAAEVNGSS 432

[Close]

BLAST of Pay0018205 vs. ExPASy TrEMBL
Match: A0A6J1KYU5 (polyadenylate-binding protein RBP47-like OS=Cucurbita maxima OX=3661 GN=LOC111499959 PE=4 SV=1)

HSP 1 Score: 743.0 bits (1917), Expect = 7.0e-211
Identity = 386/456 (84.65%), Postives = 405/456 (88.82%), Query Frame = 0


Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMA 60
           MAQPSNGADLNPQAPHPHHQW+QQQ+QYQQQWMA+QYPAAAMAMM QQQMMMYPPQHY+A
Sbjct: 1   MAQPSNGADLNPQAPHPHHQWYQQQRQYQQQWMAVQYPAAAMAMMQQQQMMMYPPQHYVA 60

Query: 61  YSHHPYQQQQQQQQQP----SSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYL 120
           YSHHPYQQQQ  QQQP      QQQQQ  QSQRPRRQGSTD+VKTLWIGDLQ WMDETYL
Sbjct: 61  YSHHPYQQQQHPQQQPPPSQQQQQQQQQPQSQRPRRQGSTDDVKTLWIGDLQAWMDETYL 120

Query: 121 NNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLN 180
           +NCFAHTGEV SVKVICNKQTGQSEGYGFVEF+SH TA+KVLQNYNG +MPNT+LPFRLN
Sbjct: 121 HNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFRLN 180

Query: 181 WATFSANDRRPDAGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKG 240
           WATFS NDRRPD GSDLSIFVGDLAADVTDAMLQETFSS+YTSVKGAKVVIDSNSGRSKG
Sbjct: 181 WATFSGNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKG 240

Query: 241 YGFVRFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNG 300
           YGFVRFGDENE++RAM EMNGIYCSSRPMRIGVATPKKASGYQQGY+SQALVLAGGH NG
Sbjct: 241 YGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANG 300

Query: 301 MAVQGSQSDSESNNNQLVVPQIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFV 360
           MAVQG QSD ESNN       IFVGGLDSDVSDEDLK  FSKFG+++SVKIPIGKGCGFV
Sbjct: 301 MAVQGPQSDGESNNT-----TIFVGGLDSDVSDEDLKQPFSKFGEIVSVKIPIGKGCGFV 360

Query: 361 QFANRKNAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSY-GGY 420
           QFANRKNAEDA+QGLNGTVIGKQ VRLSWGRSTG+KQWR DSNNQWNGGRYG   Y GGY
Sbjct: 361 QFANRKNAEDAIQGLNGTVIGKQIVRLSWGRSTGSKQWRSDSNNQWNGGRYGVPGYGGGY 420

Query: 421 GGYYSVPQHQDPNIHPTAA-------AAAAAVNGSS 445
           GGYYSVPQ QD N   T         A AAAVNGSS
Sbjct: 421 GGYYSVPQQQDANTQATVGAELMGHLAPAAAVNGSS 451

[Close]

BLAST of Pay0018205 vs. NCBI nr
Match: XP_008459212.1 (PREDICTED: polyadenylate-binding protein RBP47 [Cucumis melo])

HSP 1 Score: 853.6 bits (2204), Expect = 7.6e-244
Identity = 436/444 (98.20%), Postives = 436/444 (98.20%), Query Frame = 0


Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMA 60
           MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMA
Sbjct: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMA 60

Query: 61  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF 120
           YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF
Sbjct: 61  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF 120

Query: 121 AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATF 180
           AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATF
Sbjct: 121 AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATF 180

Query: 181 SANDRRPDAGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV 240
           SANDRRPD GSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV
Sbjct: 181 SANDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV 240

Query: 241 RFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQ 300
           RFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQ
Sbjct: 241 RFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQ 300

Query: 301 GSQSDSESNNNQLVVPQIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFAN 360
           GSQSDSESNN       IFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFAN
Sbjct: 301 GSQSDSESNNT-----TIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFAN 360

Query: 361 RKNAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYS 420
           RKNAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYS
Sbjct: 361 RKNAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYS 420

Query: 421 VPQHQDPNIHPTAAAAAAAVNGSS 445
           VPQHQDPNIHPTAAAAAAAVNGSS
Sbjct: 421 VPQHQDPNIHPTAAAAAAAVNGSS 439

[Close]

BLAST of Pay0018205 vs. NCBI nr
Match: XP_004145357.2 (polyadenylate-binding protein RBP47 [Cucumis sativus] >KAE8651855.1 hypothetical protein Csa_006374 [Cucumis sativus])

HSP 1 Score: 837.0 bits (2161), Expect = 7.4e-239
Identity = 427/444 (96.17%), Postives = 432/444 (97.30%), Query Frame = 0


Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMA 60
           MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQM+MYPPQHYMA
Sbjct: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMVMYPPQHYMA 60

Query: 61  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF 120
           YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF
Sbjct: 61  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF 120

Query: 121 AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATF 180
           AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATF
Sbjct: 121 AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATF 180

Query: 181 SANDRRPDAGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV 240
           SANDRRPD GSDLSIFVGDLAADVTDA+LQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV
Sbjct: 181 SANDRRPDTGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV 240

Query: 241 RFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQ 300
           RFGDENERTRAM EMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQ
Sbjct: 241 RFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQ 300

Query: 301 GSQSDSESNNNQLVVPQIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFAN 360
           GSQSDSESNN       IFVGGLDSDVSDEDLK AFSKFGDV+SVKIPIGKGCGFVQFAN
Sbjct: 301 GSQSDSESNNT-----TIFVGGLDSDVSDEDLKQAFSKFGDVVSVKIPIGKGCGFVQFAN 360

Query: 361 RKNAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYS 420
           RKNAEDA+QGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYS
Sbjct: 361 RKNAEDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYS 420

Query: 421 VPQHQDPNIHPTAAAAAAAVNGSS 445
           VPQHQDPN+HPT  AAAAAVNGSS
Sbjct: 421 VPQHQDPNMHPT--AAAAAVNGSS 437

[Close]

BLAST of Pay0018205 vs. NCBI nr
Match: XP_038901011.1 (polyadenylate-binding protein RBP47 [Benincasa hispida])

HSP 1 Score: 791.2 bits (2042), Expect = 4.7e-225
Identity = 407/445 (91.46%), Postives = 417/445 (93.71%), Query Frame = 0


Query: 1   MAQPSNGADLNPQAPHP-HHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYM 60
           MAQPSNGADLNPQAPHP HHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYM
Sbjct: 1   MAQPSNGADLNPQAPHPHHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYM 60

Query: 61  AYSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNC 120
           AYSHHPYQQQQQQ QQP SQQQ Q AQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNC
Sbjct: 61  AYSHHPYQQQQQQHQQP-SQQQHQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNC 120

Query: 121 FAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWAT 180
           FAHTGEV SVKVICNKQTGQSEGYGFVEF+SH TA+K+LQNYNG IMPNT+LPFRLNWAT
Sbjct: 121 FAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKILQNYNGAIMPNTDLPFRLNWAT 180

Query: 181 FSANDRRPDAGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGF 240
           FS+NDRRPD GSDLSIFVGDLAADVTDAMLQETFSSRY SVKGAKVVIDSNSGRSKGYGF
Sbjct: 181 FSSNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYASVKGAKVVIDSNSGRSKGYGF 240

Query: 241 VRFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAV 300
           VRF DENERTRAM EMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGH NG+AV
Sbjct: 241 VRFSDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHANGIAV 300

Query: 301 QGSQSDSESNNNQLVVPQIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFA 360
           QGSQSD ESNN       IFVGGLDSDVSDEDLK  FSKFGDV+SVKIPIGKGCGFVQFA
Sbjct: 301 QGSQSDGESNNT-----TIFVGGLDSDVSDEDLKQPFSKFGDVVSVKIPIGKGCGFVQFA 360

Query: 361 NRKNAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYY 420
           NRKNAEDA+QGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYY
Sbjct: 361 NRKNAEDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYY 420

Query: 421 SVPQHQDPNIHPTAAAAAAAVNGSS 445
           SVPQHQD N+HPT    AA+VNGSS
Sbjct: 421 SVPQHQDANMHPT----AASVNGSS 435

[Close]

BLAST of Pay0018205 vs. NCBI nr
Match: XP_022986538.1 (polyadenylate-binding protein RBP47-like [Cucurbita maxima])

HSP 1 Score: 765.8 bits (1976), Expect = 2.1e-217
Identity = 391/444 (88.06%), Postives = 408/444 (91.89%), Query Frame = 0


Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMA 60
           MAQPSNGADLNPQAPHPH QWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYM 
Sbjct: 1   MAQPSNGADLNPQAPHPHQQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMT 60

Query: 61  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF 120
           YSH PY    QQQ  P  QQQQQ AQSQRPRRQGSTDEVKTLWIGDLQPWMDETYL+NCF
Sbjct: 61  YSHLPY----QQQPPPLQQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNCF 120

Query: 121 AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATF 180
           AH GEV SVKVICNKQTGQSEGYGFVEF+SH TA+KVLQNYNG IMPNT+LPFRLNWATF
Sbjct: 121 AHIGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTDLPFRLNWATF 180

Query: 181 SANDRRPDAGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV 240
           S +DRRPD GSDLSIFVGDLAADVTDAMLQETFSS+YTSVKGAKVVIDSNSGRSKGYGFV
Sbjct: 181 SGSDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFV 240

Query: 241 RFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQ 300
           RFGDE+ERTRA+ EMNGIYCSSRPMRIGVATPKKASGYQQGY+SQALVLAGGH NGMAVQ
Sbjct: 241 RFGDESERTRAVTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQ 300

Query: 301 GSQSDSESNNNQLVVPQIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFAN 360
           GSQSD ESNN       IFVGGLDSDVSDEDL+  FSKFG+++SVKIPIGKGCGFVQFAN
Sbjct: 301 GSQSDGESNNT-----TIFVGGLDSDVSDEDLRQPFSKFGEIVSVKIPIGKGCGFVQFAN 360

Query: 361 RKNAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYS 420
           RKNAEDA+QGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQ YGGYGGYYS
Sbjct: 361 RKNAEDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQGYGGYGGYYS 420

Query: 421 VPQHQDPNIHPTAAAAAAAVNGSS 445
           +PQHQD N+H    AAAAAVNG+S
Sbjct: 421 IPQHQDANMH----AAAAAVNGTS 431

[Close]

BLAST of Pay0018205 vs. NCBI nr
Match: XP_022943942.1 (polyadenylate-binding protein RBP47-like [Cucurbita moschata] >KAG6571157.1 Polyadenylate-binding protein RBP47, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 760.0 bits (1961), Expect = 1.2e-215
Identity = 390/444 (87.84%), Postives = 407/444 (91.67%), Query Frame = 0


Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMA 60
           MAQPSNGADLNPQAPHPH QWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYM 
Sbjct: 1   MAQPSNGADLNPQAPHPHQQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMT 60

Query: 61  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCF 120
           YSH PY     QQQ P  QQQQQ AQSQRPRRQGSTDEVKTLWIGDLQPWMDETYL+NCF
Sbjct: 61  YSHLPY-----QQQPPPLQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNCF 120

Query: 121 AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATF 180
           AH GEV SVKVICNKQTGQSEGYGFVEF+SH TA+KVLQNYNG IMPNT+LPFRLNWATF
Sbjct: 121 AHIGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTDLPFRLNWATF 180

Query: 181 SANDRRPDAGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV 240
           S +DRRPD GSDLSIFVGDLAADVTDAMLQETFSS+YTSVKGAKVVIDSNSGRSKGYGFV
Sbjct: 181 SGSDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGFV 240

Query: 241 RFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQ 300
           RFGDE+ERTRA+ EMNGIYCSSRPMRIGVATPKKASGYQQGY+SQALVLAGGH NGMAVQ
Sbjct: 241 RFGDESERTRAVTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAVQ 300

Query: 301 GSQSDSESNNNQLVVPQIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFAN 360
           GSQSD ESNN       IFVGGLDSDVSDEDL+  FSKFG+++SVKIPIGKGCGFVQFAN
Sbjct: 301 GSQSDGESNNT-----TIFVGGLDSDVSDEDLRQPFSKFGEIVSVKIPIGKGCGFVQFAN 360

Query: 361 RKNAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYS 420
           RKNAEDA+QGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQ YGGYGGYY 
Sbjct: 361 RKNAEDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQGYGGYGGYY- 420

Query: 421 VPQHQDPNIHPTAAAAAAAVNGSS 445
           +PQHQD N+H    AAAAAVNG+S
Sbjct: 421 IPQHQDANMH----AAAAAVNGTS 429

[Close]

BLAST of Pay0018205 vs. TAIR 10
Match: AT3G19130.1 (RNA-binding protein 47B )

HSP 1 Score: 493.4 bits (1269), Expect = 1.9e-139
Identity = 281/442 (63.57%), Postives = 328/442 (74.21%), Query Frame = 0


Query: 3   QPSNGADL----------NPQAPHPHHQWFQQQQQYQQQWM-AMQY-PAAAMAMMHQQQM 62
           Q +NG+D           N Q P P  QW QQQQQ QQQWM AMQY PAAAM MM QQQM
Sbjct: 2   QTTNGSDSTLATSGATPPNQQTPPPPQQW-QQQQQQQQQWMAAMQYPPAAAMMMMQQQQM 61

Query: 63  MMYPPQHYMAYSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPW 122
           +MYP Q Y+ Y+  PYQQ   Q  Q  S QQ QH Q +   R GS D+VKTLW+GDL  W
Sbjct: 62  LMYPHQ-YVPYNQGPYQQHHPQLHQYGSYQQHQHQQHKAIDR-GSGDDVKTLWVGDLLHW 121

Query: 123 MDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTE 182
           MDETYL++CF+HTGEVSSVKVI NK T QSEGYGFVEF S   AE+VLQNY+G++MPN++
Sbjct: 122 MDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSD 181

Query: 183 LPFRLNWATFSANDRRP-DAGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDS 242
            PFR+NWA+FS  ++R  + G DLS+FVGDL+ DVTD +L ETFS RY SVK AKVVIDS
Sbjct: 182 QPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDS 241

Query: 243 NSGRSKGYGFVRFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVL 302
           N+GRSKGYGFVRFGDENER+RA+ EMNG YCS+R MR+G+ATPK+A   QQ ++SQA++L
Sbjct: 242 NTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVIL 301

Query: 303 AGGH-PNGMAVQGSQSDSESNNNQLVVPQIFVGGLDSDVSDEDLKLAFSKFGDVISVKIP 362
           AGGH  NG    GSQSD ES N       IFVGG+D DV DEDL+  FS+FG+V+SVKIP
Sbjct: 302 AGGHGSNGSMGYGSQSDGESTN-----ATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIP 361

Query: 363 IGKGCGFVQFANRKNAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYG 422
           +GKGCGFVQFA+RK+AEDA++ LNGTVIGK TVRLSWGRS  NKQWRGDS  QWNGG   
Sbjct: 362 VGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NKQWRGDSGQQWNGGYSR 421

Query: 423 GQSYGGYGGYYSVPQHQDPNIH 431
           G  Y   GGY +   H   N H
Sbjct: 422 GHGYNNGGGYAN--HHDSNNYH 432

[Close]

BLAST of Pay0018205 vs. TAIR 10
Match: AT1G49600.1 (RNA-binding protein 47A )

HSP 1 Score: 485.7 bits (1249), Expect = 3.9e-137
Identity = 280/428 (65.42%), Postives = 320/428 (74.77%), Query Frame = 0


Query: 13  QAPHPHHQWFQQQQQYQQQWMA--MQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQQ 72
           Q+  P  Q  QQQ Q QQQWMA   QYPAAAMAMM QQQMMMYP   Y  Y+   YQQ  
Sbjct: 29  QSTPPPQQQQQQQWQQQQQWMAAMQQYPAAAMAMMQQQQMMMYPHPQYAPYNQAAYQQHP 88

Query: 73  QQQQQPSSQQQQQHAQSQRPRRQGS-TDEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSV 132
           Q Q     QQQQQH QSQ+  R GS  D+VKTLW+GDL  WMDETYL+ CF+HT EVSSV
Sbjct: 89  QFQYAAYQQQQQQHHQSQQQPRGGSGGDDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSV 148

Query: 133 KVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATFSANDRR-PD 192
           KVI NKQT QSEGYGFVEF S + AE+ LQ+++G  MPN E PFRLNWA+FS  ++R  +
Sbjct: 149 KVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEKRASE 208

Query: 193 AGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENER 252
            G DLSIFVGDLA DV+DA+L ETF+ RY SVKGAKVVIDSN+GRSKGYGFVRFGDENER
Sbjct: 209 NGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENER 268

Query: 253 TRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQGSQSDSES 312
           +RAM EMNG +CSSR MR+G+ATPK+A+ Y Q   SQAL LAGGH       GS SD ES
Sbjct: 269 SRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGG----NGSMSDGES 328

Query: 313 NNNQLVVPQIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANRKNAEDAL 372
           NN+      IFVGGLD+DV++EDL   FS FG+V+SVKIP+GKGCGFVQFANR++AE+A+
Sbjct: 329 NNS-----TIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAI 388

Query: 373 QGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQHQDPN 432
             LNGTVIGK TVRLSWGRS  NKQWR DS NQWNGG   GQ Y    GY     +QD N
Sbjct: 389 GNLNGTVIGKNTVRLSWGRSP-NKQWRSDSGNQWNGGYSRGQGYN--NGY----ANQDSN 440

Query: 433 IHPTAAAA 437
           ++ TAAAA
Sbjct: 449 MYATAAAA 440

[Close]

BLAST of Pay0018205 vs. TAIR 10
Match: AT1G47500.1 (RNA-binding protein 47C' )

HSP 1 Score: 387.9 bits (995), Expect = 1.1e-107
Identity = 234/432 (54.17%), Postives = 277/432 (64.12%), Query Frame = 0


Query: 6   NGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHP 65
           N    +P  P PH             W  M+YP   M        MMY P   M +S  P
Sbjct: 39  NQPKTSPTPPPPH-------------W--MRYPPVLM------PQMMYAPPPPMPFS--P 98

Query: 66  YQQQQQQQQQPSSQQQQQHAQSQRPRRQGS-TDEVKTLWIGDLQPWMDETYLNNCF--AH 125
           Y Q               H QS+  + Q +   E KT+W+GDLQ WMDE YLN+ F  A 
Sbjct: 99  YHQY--------PNHHHFHHQSRGNKHQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAE 158

Query: 126 TGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATFSA 185
             E+ S+KVI NK  G SEGYGFVEF SH  A+KVLQ +NG  MPNT+ PFRLNWA+FS 
Sbjct: 159 EREIVSLKVIRNKHNGSSEGYGFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWASFST 218

Query: 186 NDRR-PDAGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVR 245
            ++R  + G DLSIFVGDLA DV+DA+L ETFS +Y SVK AKVV+D+N+GRSKGYGFVR
Sbjct: 219 GEKRLENNGPDLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVR 278

Query: 246 FGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQG 305
           FGDENERT+AM EMNG+ CSSR MRIG ATP+K +GYQQ          GG+    A   
Sbjct: 279 FGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQ---------QGGYMPSGAFTR 338

Query: 306 SQSDSESNNNQLVVPQIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANR 365
           S+ D+       +   IFVGGLDS V+DEDLK  FS+FG+++SVKIP+GKGCGFVQF NR
Sbjct: 339 SEGDT-------INTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNR 398

Query: 366 KNAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSV 425
            NAE+AL+ LNGTVIGKQTVRLSWGR+  NKQ R    NQW    YGGQ Y GYG  Y V
Sbjct: 399 PNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYGGQFYNGYG--YMV 420

Query: 426 PQHQDPNIHPTA 434
           PQ  DP ++P A
Sbjct: 459 PQ-PDPRMYPAA 420

[Close]

BLAST of Pay0018205 vs. TAIR 10
Match: AT1G47490.1 (RNA-binding protein 47C )

HSP 1 Score: 377.5 bits (968), Expect = 1.5e-104
Identity = 230/438 (52.51%), Postives = 282/438 (64.38%), Query Frame = 0


Query: 9   DLNPQAPHPHHQWFQQQQQYQQQ--------WMAMQYPAAAMAMMHQQQMMMYPPQHYMA 68
           D  P  P P  Q   ++++ Q +        W  M+YP   + + HQ   MMY P  +  
Sbjct: 20  DNQPPPPPPPPQQPAKEEENQPKTSPTPPPHW--MRYPPTVI-IPHQ---MMYAPPPFPP 79

Query: 69  YSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGS-TDEVKTLWIGDLQPWMDETYLNNC 128
           Y  +P                  H QS+  + Q +   E KT+W+GDL  WMDE YLN+ 
Sbjct: 80  YHQYP-------------NHHHLHHQSRGNKHQNAFNGENKTIWVGDLHHWMDEAYLNSS 139

Query: 129 FA--HTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNW 188
           FA     E+ SVKVI NK  G SEGYGFVEF SH  A+KVL+ +NGT MPNT+ PFRLNW
Sbjct: 140 FASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNW 199

Query: 189 ATFSANDRR-PDAGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKG 248
           A+FS  ++R  + G DLSIFVGDL+ DV+D +L ETFS +Y SVK AKVV+D+N+GRSKG
Sbjct: 200 ASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKG 259

Query: 249 YGFVRFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGH-PN 308
           YGFVRFGDENERT+AM EMNG+ CSSR MRIG ATP+K +GYQQ          GG+ PN
Sbjct: 260 YGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQ---------QGGYMPN 319

Query: 309 GMAVQGSQSDSESNNNQLVVPQIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGF 368
           G   +            ++   IFVGGLDS V+DEDLK  F++FG+++SVKIP+GKGCGF
Sbjct: 320 GTLTR--------PEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCGF 379

Query: 369 VQFANRKNAEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGY 428
           VQF NR NAE+AL+ LNGTVIGKQTVRLSWGR+  NKQ R    NQW    YGGQ Y GY
Sbjct: 380 VQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYGGQFYNGY 418

Query: 429 GGYYSVPQHQDPNIHPTA 434
           G  Y VPQ  DP ++P A
Sbjct: 440 G--YMVPQ-PDPRMYPAA 418

[Close]

BLAST of Pay0018205 vs. TAIR 10
Match: AT5G54900.1 (RNA-binding protein 45A )

HSP 1 Score: 340.9 bits (873), Expect = 1.6e-93
Identity = 200/368 (54.35%), Postives = 241/368 (65.49%), Query Frame = 0


Query: 67  QQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNNCFAHTGEV 126
           QQQQQQQ Q S+    QH      +  GS  +VK+LWIGDLQ WMDE Y+ + FA +GE 
Sbjct: 27  QQQQQQQMQLSAAPLGQHQYGIGSQNPGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEA 86

Query: 127 SSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWATFSANDRR 186
           +S KVI NK TGQSEGYGF+EF SH+ AE+VLQ YNG  MP+TE  FRLNWA   A ++R
Sbjct: 87  TSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKR 146

Query: 187 -PDAGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDE 246
               G D +IFVGDLA +VTD ML +TF + Y SVKGAKVV+D  +GRSKGYGFVRF DE
Sbjct: 147 FQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADE 206

Query: 247 NERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQGSQSD 306
           NE+ RAM EMNG YCS+RPMRIG A  K A   Q                    QG+ + 
Sbjct: 207 NEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQN-------------TQGANAG 266

Query: 307 SESNNNQLVVPQIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANRKNAE 366
               NN      IFVGGLD++V+D++LK  F +FG+++ VKIP GK CGFVQ+AN+ +AE
Sbjct: 267 DNDPNN----TTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANKASAE 326

Query: 367 DALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGG---QSYGGYGGYYSVP 426
            AL  LNGT +G Q++RLSWGRS  NKQ       QWNGG Y G   Q  GGY GY + P
Sbjct: 327 HALSVLNGTQLGGQSIRLSWGRSP-NKQ---SDQAQWNGGGYYGYPPQPQGGY-GYAAQP 372

Query: 427 QHQDPNIH 431
             QDPN +
Sbjct: 387 PTQDPNAY 372

The following BLAST results are available for this feature:

BLAST of Pay0018205 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WW84	2.6e-138	63.57	Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B P...	[more]
Q9LEB3	1.0e-137	60.95	Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
F4I3B3	5.5e-136	65.42	Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A P...	[more]
Q9SX80	1.6e-106	54.17	Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C'...	[more]
Q9SX79	2.1e-103	52.51	Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C P...	[more]

BLAST of Pay0018205 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C9N4	3.7e-244	98.20	polyadenylate-binding protein RBP47 OS=Cucumis melo OX=3656 GN=LOC103498402 PE=4...	[more]
A0A6J1JGT7	1.0e-217	88.06	polyadenylate-binding protein RBP47-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1FUF1	5.6e-216	87.84	polyadenylate-binding protein RBP47-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1D3C6	3.1e-214	87.84	polyadenylate-binding protein RBP47 OS=Momordica charantia OX=3673 GN=LOC1110172...	[more]
A0A6J1KYU5	7.0e-211	84.65	polyadenylate-binding protein RBP47-like OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]

BLAST of Pay0018205 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459212.1	7.6e-244	98.20	PREDICTED: polyadenylate-binding protein RBP47 [Cucumis melo]	[more]
XP_004145357.2	7.4e-239	96.17	polyadenylate-binding protein RBP47 [Cucumis sativus] >KAE8651855.1 hypothetical...	[more]
XP_038901011.1	4.7e-225	91.46	polyadenylate-binding protein RBP47 [Benincasa hispida]	[more]
XP_022986538.1	2.1e-217	88.06	polyadenylate-binding protein RBP47-like [Cucurbita maxima]	[more]
XP_022943942.1	1.2e-215	87.84	polyadenylate-binding protein RBP47-like [Cucurbita moschata] >KAG6571157.1 Poly...	[more]

BLAST of Pay0018205 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19130.1	1.9e-139	63.57	RNA-binding protein 47B	[more]
AT1G49600.1	3.9e-137	65.42	RNA-binding protein 47A	[more]
AT1G47500.1	1.1e-107	54.17	RNA-binding protein 47C'	[more]
AT1G47490.1	1.5e-104	52.51	RNA-binding protein 47C	[more]
AT5G54900.1	1.6e-93	54.35	RNA-binding protein 45A	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 317..384 e-value: 1.1E-21 score: 88.1 coord: 194..268 e-value: 1.5E-18 score: 77.6 coord: 101..174 e-value: 2.6E-14 score: 63.6
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 102..171 e-value: 7.2E-15 score: 54.6 coord: 318..381 e-value: 1.1E-18 score: 66.8 coord: 195..265 e-value: 5.6E-15 score: 54.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 100..180 score: 14.436429
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 316..388 score: 17.69401
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 193..272 score: 16.858295
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 295..423 e-value: 7.5E-26 score: 92.9
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 192..269 e-value: 1.9E-21 score: 78.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 56..191 e-value: 5.1E-28 score: 99.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 19..436
None	No IPR available	PANTHER	PTHR47640:SF9	POLYADENYLATE-BINDING PROTEIN RBP47B	coord: 19..436
None	No IPR available	CDD	cd12345	RRM2_SECp43_like	coord: 192..271 e-value: 1.94264E-47 score: 155.9
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 101..181 e-value: 6.15523E-47 score: 154.343
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 318..418
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 64..183
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 176..286

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0018205.1	Pay0018205.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005829	cytosol
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding