Pay0018195 (gene) Melon (Payzawat) v1

Overview


Name	Pay0018195
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Nuclear transcription factor Y subunit B-3
Location	chr11: 14196772 .. 14198537 (+)
RNA-Seq Expression	Pay0018195
Synteny	Pay0018195

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGATCAACGCCGTTCCTTGGCCAATCCAACACTCCAAAATTTTCCACGAAGCGCACTCTTATCGACAAATAAACGGTGAGAAATCAAAAACGTGTCGCTCCCGATTGCATTATTAGCCCAAACGACGCGATGGACTCTAACAACTCCCCTTCTACTCCCCCTCACCTGTTTTCTTGGAGTGTTTCCTCTCCGGCGGCAACTTTCCGTTTCTCTTTATATTCAGAATTCCAATTCCAGCCTTCCGGCATCCGTAAGAATTCCGGTCATTCCTTGATCAAAAAACACTACTCTCCAAATATCATTCATCATCTCTCTATTAACTCAATTTGATTTTCTTCTTGCAGGATAATCGGCCGCTCTTTTTCGTTCCGCGTCGCCGGCGCGGAAAATTGTACCTCGTGTCTTTCTATTATCTGATTCTTTTTTCATCTCATGACCGTGTTTTCTTTCTCTTCTTCTTTTTAATTCCAATGAGTTTCTGATAGGCCTATTAGAACTTTGCTGATGTTAATCTCTTGTTTGAGGATACGATTCTGGAATCGAAGTTAAGCGTTTTAGGTCAATAGAGTTTCGCAATTCGATTTCCCTTCTTTCTCGTTTCTTTATTTGTTCTGTGAGAGGGGGAATCGTTCCGGTCAATTTTGATCGTGAAAAGTGGAAAGGATTCGGTCTGTATTCTTTCCGTAACCTAAATTGATAATTAAAGTAAGTGTTGTGGATCGTTGTTGTGAGAATGGATCGAGAGGACAAAAGGTGCACATCGTAGTTCGTAAGCTTTCCAAAGCCCTAGGTGGAGAAATTGTTGGAGATTGTGAAATCGTTAGAGAGAGAGGCCGTTTAGAAATGGCGGATTCAGATAACGAATCGGGAGGTCACAACAGCAACGCTAACAGCGAGCTATCGGCGAAGGAGCAGGACAGATTCTTGCCGATAGCGAACGTGAGCAGGATCATGAAGAAGGCGTTACCAGCAAACGCAAAAATCTCAAAAGATGCGAAAGAAACAGTACAAGAGTGTGTATCGGAGTTCATAAGCTTCATAACAGGAGAAGCATCGGACAAGTGCCAAAGAGAGAAAAGGAAGACAATCAACGGCGATGATTTGCTGTGGGCCATGACCACGCTTGGATTCGAAGAGTATGTGGAACCGCTCAAGACTTATCTTCAAAAGTACAGGGAAATGGAAGGGGAAAAGAGCACTATGGGGAGACAAGGGGAGAAAGACGGTGGTGGTGGTGGGCCCGGCGGCAGTGGTGGAGGAGTCAACTCTTCTGGTACTGCTGCTGGTGGCGCCGGTGGTGGATACAACGGAGTGGGTGGAATGTATGGTGGGGTAATGATGATGGGTCATCATCAGGGAGGCGTTTATGGTGGTGCTGGATTTCATCATATGGGAATTGGCGGCGGGAAAGGAGGAAGTGGTGCTTCCGGCACCGGGCACCGGTAGTGGTGTGGGACTGCTGCAAGGTCAAGCTAAGTGGGCTGTGTGCTAGTTGGAACCTTTTAAAGGTTCTCCAACTTTTGAGCATCATTGATGACTTTTTAGGAAGTTAATAAGAATTTTTTTTCCTCCTTTTGGGTCATTGAAAGTTGTGGAAAACTACTTGGGTCTTTGTCAAATTTCTCTATTTTTCCTTTTTTTTCCCCTTTTTTCTTTGTATAAGTGTAATTTGTGTATCTTGTGTGTAAGAGGGATATATGATAAATATGATTGCATTTGTACAATTGTAACCCCTAATTTTACACCAACTAATTGCTAAGACCC

mRNA sequence

TTAGATCAACGCCGTTCCTTGGCCAATCCAACACTCCAAAATTTTCCACGAAGCGCACTCTTATCGACAAATAAACGGTGAGAAATCAAAAACGTGTCGCTCCCGATTGCATTATTAGCCCAAACGACGCGATGGACTCTAACAACTCCCCTTCTACTCCCCCTCACCTGTTTTCTTGGAGTGTTTCCTCTCCGGCGGCAACTTTCCGTTTCTCTTTATATTCAGAATTCCAATTCCAGCCTTCCGGCATCCGATAATCGGCCGCTCTTTTTCGTTCCGCGTCGCCGGCGCGGAAAATTGTACCTCGTGTCTTTCTATTATCTGATTCTTTTTTCATCTCATGACCGTGTTTTCTTTCTCTTCTTCTTTTTAATTCCAATGAGTTTCTGATAGGCCTATTAGAACTTTGCTGATGTTAATCTCTTGTTTGAGGATACGATTCTGGAATCGAAGTTAAGCGTTTTAGGTCAATAGAGTTTCGCAATTCGATTTCCCTTCTTTCTCGTTTCTTTATTTGTTCTGTGAGAGGGGGAATCGTTCCGGTCAATTTTGATCGTGAAAAGTGGAAAGGATTCGGTCTGTATTCTTTCCGTAACCTAAATTGATAATTAAAGTAAGTGTTGTGGATCGTTGTTGTGAGAATGGATCGAGAGGACAAAAGGTGCACATCGTAGTTCGTAAGCTTTCCAAAGCCCTAGGTGGAGAAATTGTTGGAGATTGTGAAATCGTTAGAGAGAGAGGCCGTTTAGAAATGGCGGATTCAGATAACGAATCGGGAGGTCACAACAGCAACGCTAACAGCGAGCTATCGGCGAAGGAGCAGGACAGATTCTTGCCGATAGCGAACGTGAGCAGGATCATGAAGAAGGCGTTACCAGCAAACGCAAAAATCTCAAAAGATGCGAAAGAAACAGTACAAGAGTGTGTATCGGAGTTCATAAGCTTCATAACAGGAGAAGCATCGGACAAGTGCCAAAGAGAGAAAAGGAAGACAATCAACGGCGATGATTTGCTGTGGGCCATGACCACGCTTGGATTCGAAGAGTATGTGGAACCGCTCAAGACTTATCTTCAAAAGTACAGGGAAATGGAAGGGGAAAAGAGCACTATGGGGAGACAAGGGGAGAAAGACGGTGGTGGTGGTGGGCCCGGCGGCAGTGGTGGAGGAGTCAACTCTTCTGGTACTGCTGCTGGTGGCGCCGGTGGTGGATACAACGGAGTGGGTGGAATGTATGGTGGGGTAATGATGATGGGTCATCATCAGGGAGGCGTTTATGGTGGTGCTGGATTTCATCATATGGGAATTGGCGGCGGGAAAGGAGGAAGTGGTGCTTCCGGCACCGGGCACCGGTAGTGGTGTGGGACTGCTGCAAGGTCAAGCTAAGTGGGCTGTGTGCTAGTTGGAACCTTTTAAAGGTTCTCCAACTTTTGAGCATCATTGATGACTTTTTAGGAAGTTAATAAGAATTTTTTTTCCTCCTTTTGGGTCATTGAAAGTTGTGGAAAACTACTTGGGTCTTTGTCAAATTTCTCTATTTTTCCTTTTTTTTCCCCTTTTTTCTTTGTATAAGTGTAATTTGTGTATCTTGTGTGTAAGAGGGATATATGATAAATATGATTGCATTTGTACAATTGTAACCCCTAATTTTACACCAACTAATTGCTAAGACCC

Coding sequence (CDS)

ATGGCGGATTCAGATAACGAATCGGGAGGTCACAACAGCAACGCTAACAGCGAGCTATCGGCGAAGGAGCAGGACAGATTCTTGCCGATAGCGAACGTGAGCAGGATCATGAAGAAGGCGTTACCAGCAAACGCAAAAATCTCAAAAGATGCGAAAGAAACAGTACAAGAGTGTGTATCGGAGTTCATAAGCTTCATAACAGGAGAAGCATCGGACAAGTGCCAAAGAGAGAAAAGGAAGACAATCAACGGCGATGATTTGCTGTGGGCCATGACCACGCTTGGATTCGAAGAGTATGTGGAACCGCTCAAGACTTATCTTCAAAAGTACAGGGAAATGGAAGGGGAAAAGAGCACTATGGGGAGACAAGGGGAGAAAGACGGTGGTGGTGGTGGGCCCGGCGGCAGTGGTGGAGGAGTCAACTCTTCTGGTACTGCTGCTGGTGGCGCCGGTGGTGGATACAACGGAGTGGGTGGAATGTATGGTGGGGTAATGATGATGGGTCATCATCAGGGAGGCGTTTATGGTGGTGCTGGATTTCATCATATGGGAATTGGCGGCGGGAAAGGAGGAAGTGGTGCTTCCGGCACCGGGCACCGGTAG

Protein sequence

MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTMGRQGEKDGGGGGPGGSGGGVNSSGTAAGGAGGGYNGVGGMYGGVMMMGHHQGGVYGGAGFHHMGIGGGKGGSGASGTGHR

Homology

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BLAST of Pay0018195 vs. ExPASy Swiss-Prot
Match: O23310 (Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NFYB3 PE=1 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 8.1e-55
Identity = 129/172 (75.00%), Postives = 139/172 (80.81%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDN+SGGH    N+  S +EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNDSGGHKDGGNA--STREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEK-ST 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+YVEPLK YLQKYRE+EGEK +T
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTT 120

Query: 121 MGRQGEKDGGGGGPGGSGGGVNSSGTAAGGAGGGYNGVGGMYGGVMM--MGH 170
            GRQG+K+GGGGG               GGAG G +G   MYGG M+  MGH
Sbjct: 121 AGRQGDKEGGGGG---------------GGAGSG-SGGAPMYGGGMVTTMGH 154

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BLAST of Pay0018195 vs. ExPASy Swiss-Prot
Match: Q69J40 (Nuclear transcription factor Y subunit B-10 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB10 PE=1 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.9e-48
Identity = 137/223 (61.43%), Postives = 150/223 (67.26%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           M DSDNESGG  SNA    SA+EQDRFLPIANVSRIMK+ALPANAKISKDAKETVQECVS
Sbjct: 1   MPDSDNESGG-PSNAGEYASAREQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+Y++PLK YL K+RE+EGEK+ +
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYIDPLKLYLHKFRELEGEKA-I 120

Query: 121 GRQGEKDGGGGGPGGSGGGVNS-SGTAAGGAGGGYNGVGGMYGGVMMMG----------- 180
           G  G   GG    GGSG G  S     A    GGY   GG  G +MMMG           
Sbjct: 121 GAAGSGGGGAASSGGSGSGSGSHHHQDASRNNGGYGMYGGGGGMIMMMGQPMYGSPPASS 180

Query: 181 -----------HHQGGVYGGAGFHHMGIGGGKGGSGASGTGHR 201
                      HH   V GG G +  G GGG G S +SG G +
Sbjct: 181 AGYAQPPPPHHHHHQMVMGGKGAYGHGGGGGGGPSPSSGYGRQ 221

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BLAST of Pay0018195 vs. ExPASy Swiss-Prot
Match: Q9FGJ3 (Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NFYB2 PE=1 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 9.0e-46
Identity = 123/202 (60.89%), Postives = 139/202 (68.81%), Query Frame = 0


Query: 1   MADSDNESG----GHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQ 60
           M DSD +SG    G+N N  S LS +EQDRFLPIANVSRIMKKALPANAKISKDAKET+Q
Sbjct: 1   MGDSDRDSGGGQNGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQ 60

Query: 61  ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGE 120
           ECVSEFISF+TGEASDKCQ+EKRKTINGDDLLWAMTTLGFE+YVEPLK YLQ++RE+EGE
Sbjct: 61  ECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGE 120

Query: 121 KSTMGRQGEKDGGGGGPGGSGGGVNSSGTAAGGAGGGYNGVGG--MYGGVMMMGHHQGGV 180
           ++ +GR             +GG V      A G GGG+ G GG   Y       H Q  +
Sbjct: 121 RTGLGRP-----------QTGGEVGEHQRDAVGDGGGFYGGGGGMQYHQHHQFLHQQNHM 180

Query: 181 YGGAGFHHMGIGGGKGGSGASG 197
           YG  G      G   GG  ASG
Sbjct: 181 YGATGG-----GSDSGGGAASG 186

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BLAST of Pay0018195 vs. ExPASy Swiss-Prot
Match: Q75IZ7 (Nuclear transcription factor Y subunit B-8 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB8 PE=1 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 8.4e-44
Identity = 128/219 (58.45%), Postives = 145/219 (66.21%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSA-KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECV 60
           M DSDN+SGG ++ A  ELS+ +EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECV
Sbjct: 1   MPDSDNDSGGPSNYAGGELSSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECV 60

Query: 61  SEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKST 120
           SEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+YV+PLK YL K+RE+EGE++ 
Sbjct: 61  SEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVDPLKHYLHKFREIEGERAA 120

Query: 121 MGRQGEKDGGGGGPGGSGGGVNSSGTAAGGAGGGYNGVGGMYGGVMMM------------ 180
               G    G      +      +  AAGG   GY   G   GG+MMM            
Sbjct: 121 ASTTG---AGTSAASTTPPQQQHTANAAGGY-AGYAAPGAGPGGMMMMMGQPMYGSPPPP 180

Query: 181 ------GHHQGGVYGGAGFHHMGIGGGKGGSGASGTGHR 201
                  HH   + G  GF H   GGG G S +SG G +
Sbjct: 181 PQQQQQQHHHMAMGGRGGFGHHPGGGGGGSSSSSGHGRQ 215

[Close]

BLAST of Pay0018195 vs. ExPASy Swiss-Prot
Match: Q0J7P4 (Nuclear transcription factor Y subunit B-11 OS=Oryza sativa subsp. japonica OX=39947 GN=HD5 PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 9.7e-40
Identity = 110/187 (58.82%), Postives = 127/187 (67.91%), Query Frame = 0


Query: 11  HNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEA 70
           +      +  AKEQDRFLPIANVSRIMK++LPANAKISK++KETVQECVSEFISF+TGEA
Sbjct: 46  YGGGGGGDSPAKEQDRFLPIANVSRIMKRSLPANAKISKESKETVQECVSEFISFVTGEA 105

Query: 71  SDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTMGRQGEKDGGG 130
           SDKCQREKRKTINGDDLLWAMTTLGFE YV PLK+YL +YRE EGEK+ +          
Sbjct: 106 SDKCQREKRKTINGDDLLWAMTTLGFEAYVGPLKSYLNRYREAEGEKADV---------L 165

Query: 131 GGPGGSGGGVNSSGTAAGGAGGGYNGV--GGMY--GGVMMMGHHQGGVYGGAGFHHMGIG 190
           GG GG+    +  G   GG GGG +GV   G Y   G +   HH      G G   + +G
Sbjct: 166 GGAGGAAAARHGEGGCCGGGGGGADGVVIDGHYPLAGGLSHSHHGHQQQDGGGDVGLMMG 223

Query: 191 GGKGGSG 194
           GG  G G
Sbjct: 226 GGDAGVG 223

[Close]

BLAST of Pay0018195 vs. ExPASy TrEMBL
Match: A0A1S3CMC5 (nuclear transcription factor Y subunit B-3 OS=Cucumis melo OX=3656 GN=LOC103502105 PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 6.2e-98
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120

Query: 121 GRQGEKDGGGGGPGGSGGGVNSSGTAAGGAGGGYNGVGGMYGGVMMMGHHQGGVYGGAGF 180
           GRQGEKDGGGGGPGGSGGGVNSSGTAAGGAGGGYNGVGGMYGGVMMMGHHQGGVYGGAGF
Sbjct: 121 GRQGEKDGGGGGPGGSGGGVNSSGTAAGGAGGGYNGVGGMYGGVMMMGHHQGGVYGGAGF 180

Query: 181 HHMGIGGGKGGSGASGTGHR 201
           HHMGIGGGKGGSGASGTGHR
Sbjct: 181 HHMGIGGGKGGSGASGTGHR 200

[Close]

BLAST of Pay0018195 vs. ExPASy TrEMBL
Match: A0A5A7V4W8 (Nuclear transcription factor Y subunit B-3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold796G00280 PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 6.2e-98
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120

Query: 121 GRQGEKDGGGGGPGGSGGGVNSSGTAAGGAGGGYNGVGGMYGGVMMMGHHQGGVYGGAGF 180
           GRQGEKDGGGGGPGGSGGGVNSSGTAAGGAGGGYNGVGGMYGGVMMMGHHQGGVYGGAGF
Sbjct: 121 GRQGEKDGGGGGPGGSGGGVNSSGTAAGGAGGGYNGVGGMYGGVMMMGHHQGGVYGGAGF 180

Query: 181 HHMGIGGGKGGSGASGTGHR 201
           HHMGIGGGKGGSGASGTGHR
Sbjct: 181 HHMGIGGGKGGSGASGTGHR 200

[Close]

BLAST of Pay0018195 vs. ExPASy TrEMBL
Match: A0A0A0KFU2 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G112490 PE=3 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 2.9e-95
Identity = 198/201 (98.51%), Postives = 198/201 (98.51%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120

Query: 121 GRQGEKDGGGGGPGGSGGGVNSSGTAAGGAGGGYNGVGGMYGGVMMMGHHQGGVYGGAGF 180
           GRQGEKDGGGGGPGGSGGGVNSSG AAGGAGGGYNGVGGMYGGVMMMGHHQGGVYGGAGF
Sbjct: 121 GRQGEKDGGGGGPGGSGGGVNSSGAAAGGAGGGYNGVGGMYGGVMMMGHHQGGVYGGAGF 180

Query: 181 HHMGIGGGKGGS-GASGTGHR 201
           HHMGIG GKGGS GASGTGHR
Sbjct: 181 HHMGIGSGKGGSGGASGTGHR 201

[Close]

BLAST of Pay0018195 vs. ExPASy TrEMBL
Match: A0A6J1G731 (nuclear transcription factor Y subunit B-3-like OS=Cucurbita moschata OX=3662 GN=LOC111451370 PE=3 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.3e-82
Identity = 184/211 (87.20%), Postives = 190/211 (90.05%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKSYLQKYREMEGEKSTM 120

Query: 121 -GRQGEKD--GGGGGPGGS--------GGGVNSSGTAAGGAGGGYNGVGGMYGGVMMMGH 180
            G +GEKD  GGGGGPGGS        GGGVN  GT  G +GGG+NGVGGMYGG+MMMGH
Sbjct: 121 GGGKGEKDGGGGGGGPGGSGANVGGGGGGGVN-PGTGGGVSGGGFNGVGGMYGGMMMMGH 180

Query: 181 HQGGVYGGAGFHHMGIGGGKGGSGASGTGHR 201
           HQGGVYG  GFH MGIGGGKGG+G SGTGHR
Sbjct: 181 HQGGVYGSGGFHQMGIGGGKGGNGGSGTGHR 210

[Close]

BLAST of Pay0018195 vs. ExPASy TrEMBL
Match: A0A6J1I2E0 (nuclear transcription factor Y subunit B-3-like OS=Cucurbita maxima OX=3661 GN=LOC111469875 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.6e-82
Identity = 184/211 (87.20%), Postives = 190/211 (90.05%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKSYLQKYREMEGEKSTM 120

Query: 121 -GRQGEKD--GGGGGPGGS--------GGGVNSSGTAAGGAGGGYNGVGGMYGGVMMMGH 180
            G +GEKD  GGGGGPGGS        GGGVN  GT  G +GGG+NGVGGMYGG+MMM H
Sbjct: 121 GGGKGEKDGGGGGGGPGGSGANVGGGGGGGVN-PGTGGGVSGGGFNGVGGMYGGMMMMVH 180

Query: 181 HQGGVYGGAGFHHMGIGGGKGGSGASGTGHR 201
           HQGGVYG  GFHHMGIGGGKGG+G SGTGHR
Sbjct: 181 HQGGVYGSGGFHHMGIGGGKGGNGGSGTGHR 210

[Close]

BLAST of Pay0018195 vs. NCBI nr
Match: XP_008464158.1 (PREDICTED: nuclear transcription factor Y subunit B-3 [Cucumis melo] >XP_008464159.1 PREDICTED: nuclear transcription factor Y subunit B-3 [Cucumis melo] >KAA0060811.1 nuclear transcription factor Y subunit B-3 [Cucumis melo var. makuwa] >TYK08821.1 nuclear transcription factor Y subunit B-3 [Cucumis melo var. makuwa])

HSP 1 Score: 366.7 bits (940), Expect = 1.3e-97
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120

Query: 121 GRQGEKDGGGGGPGGSGGGVNSSGTAAGGAGGGYNGVGGMYGGVMMMGHHQGGVYGGAGF 180
           GRQGEKDGGGGGPGGSGGGVNSSGTAAGGAGGGYNGVGGMYGGVMMMGHHQGGVYGGAGF
Sbjct: 121 GRQGEKDGGGGGPGGSGGGVNSSGTAAGGAGGGYNGVGGMYGGVMMMGHHQGGVYGGAGF 180

Query: 181 HHMGIGGGKGGSGASGTGHR 201
           HHMGIGGGKGGSGASGTGHR
Sbjct: 181 HHMGIGGGKGGSGASGTGHR 200

[Close]

BLAST of Pay0018195 vs. NCBI nr
Match: XP_004139999.1 (nuclear transcription factor Y subunit B-3 [Cucumis sativus] >KGN46611.1 hypothetical protein Csa_005340 [Cucumis sativus])

HSP 1 Score: 357.8 bits (917), Expect = 5.9e-95
Identity = 198/201 (98.51%), Postives = 198/201 (98.51%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120

Query: 121 GRQGEKDGGGGGPGGSGGGVNSSGTAAGGAGGGYNGVGGMYGGVMMMGHHQGGVYGGAGF 180
           GRQGEKDGGGGGPGGSGGGVNSSG AAGGAGGGYNGVGGMYGGVMMMGHHQGGVYGGAGF
Sbjct: 121 GRQGEKDGGGGGPGGSGGGVNSSGAAAGGAGGGYNGVGGMYGGVMMMGHHQGGVYGGAGF 180

Query: 181 HHMGIGGGKGGS-GASGTGHR 201
           HHMGIG GKGGS GASGTGHR
Sbjct: 181 HHMGIGSGKGGSGGASGTGHR 201

[Close]

BLAST of Pay0018195 vs. NCBI nr
Match: XP_038901772.1 (nuclear transcription factor Y subunit B-3 [Benincasa hispida] >XP_038901773.1 nuclear transcription factor Y subunit B-3 [Benincasa hispida])

HSP 1 Score: 325.1 bits (832), Expect = 4.3e-85
Identity = 184/204 (90.20%), Postives = 186/204 (91.18%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKSYLQKYREMEGEKSTM 120

Query: 121 GRQGEKDGGGGGPGGSGGGVNSSGTAAGGAGGGYNG--VGGMYGGVMMMG--HHQGGVYG 180
           GRQGEKDGGGGGPGGS  G N  G   GG GGG N    GGMYGG+MMMG  HHQGGVYG
Sbjct: 121 GRQGEKDGGGGGPGGS--GANGGGGGGGGGGGGVNSGTTGGMYGGMMMMGHHHHQGGVYG 180

Query: 181 GAGFHHMGIGGGKGGSGASGTGHR 201
           G GFHHMGIGGGKGGSG SGTGHR
Sbjct: 181 GGGFHHMGIGGGKGGSGGSGTGHR 202

[Close]

BLAST of Pay0018195 vs. NCBI nr
Match: XP_023532503.1 (nuclear transcription factor Y subunit B-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 320.1 bits (819), Expect = 1.4e-83
Identity = 185/208 (88.94%), Postives = 191/208 (91.83%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKSYLQKYREMEGEKSTM 120

Query: 121 -GRQGEKD--GGGGGPGGS-----GGGVNSSGTAAGGAGGGYNGVGGMYGGVMMMGHHQG 180
            G +GEKD  GGGGGPGGS     GGGVN  GT  G +GGG+NGVGGMYGG+MMMGHHQG
Sbjct: 121 GGGKGEKDGGGGGGGPGGSGANVGGGGVN-PGTGGGVSGGGFNGVGGMYGGMMMMGHHQG 180

Query: 181 GVYGGAGFHHMGIGGGKGGSGASGTGHR 201
           GVYG  GFHHMGIGGGKGG+G SGTGHR
Sbjct: 181 GVYGSGGFHHMGIGGGKGGNGGSGTGHR 207

[Close]

BLAST of Pay0018195 vs. NCBI nr
Match: XP_022947534.1 (nuclear transcription factor Y subunit B-3-like [Cucurbita moschata] >KAG6604918.1 Nuclear transcription factor Y subunit B-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 315.8 bits (808), Expect = 2.6e-82
Identity = 184/211 (87.20%), Postives = 190/211 (90.05%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQKYREMEGEKSTM
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKSYLQKYREMEGEKSTM 120

Query: 121 -GRQGEKD--GGGGGPGGS--------GGGVNSSGTAAGGAGGGYNGVGGMYGGVMMMGH 180
            G +GEKD  GGGGGPGGS        GGGVN  GT  G +GGG+NGVGGMYGG+MMMGH
Sbjct: 121 GGGKGEKDGGGGGGGPGGSGANVGGGGGGGVN-PGTGGGVSGGGFNGVGGMYGGMMMMGH 180

Query: 181 HQGGVYGGAGFHHMGIGGGKGGSGASGTGHR 201
           HQGGVYG  GFH MGIGGGKGG+G SGTGHR
Sbjct: 181 HQGGVYGSGGFHQMGIGGGKGGNGGSGTGHR 210

[Close]

BLAST of Pay0018195 vs. TAIR 10
Match: AT4G14540.1 (nuclear factor Y, subunit B3 )

HSP 1 Score: 214.9 bits (546), Expect = 5.8e-56
Identity = 129/172 (75.00%), Postives = 139/172 (80.81%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MADSDN+SGGH    N+  S +EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS
Sbjct: 1   MADSDNDSGGHKDGGNA--STREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEK-ST 120
           EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+YVEPLK YLQKYRE+EGEK +T
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTT 120

Query: 121 MGRQGEKDGGGGGPGGSGGGVNSSGTAAGGAGGGYNGVGGMYGGVMM--MGH 170
            GRQG+K+GGGGG               GGAG G +G   MYGG M+  MGH
Sbjct: 121 AGRQGDKEGGGGG---------------GGAGSG-SGGAPMYGGGMVTTMGH 154

[Close]

BLAST of Pay0018195 vs. TAIR 10
Match: AT5G47640.1 (nuclear factor Y, subunit B2 )

HSP 1 Score: 184.9 bits (468), Expect = 6.4e-47
Identity = 123/202 (60.89%), Postives = 139/202 (68.81%), Query Frame = 0


Query: 1   MADSDNESG----GHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQ 60
           M DSD +SG    G+N N  S LS +EQDRFLPIANVSRIMKKALPANAKISKDAKET+Q
Sbjct: 1   MGDSDRDSGGGQNGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQ 60

Query: 61  ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGE 120
           ECVSEFISF+TGEASDKCQ+EKRKTINGDDLLWAMTTLGFE+YVEPLK YLQ++RE+EGE
Sbjct: 61  ECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGE 120

Query: 121 KSTMGRQGEKDGGGGGPGGSGGGVNSSGTAAGGAGGGYNGVGG--MYGGVMMMGHHQGGV 180
           ++ +GR             +GG V      A G GGG+ G GG   Y       H Q  +
Sbjct: 121 RTGLGRP-----------QTGGEVGEHQRDAVGDGGGFYGGGGGMQYHQHHQFLHQQNHM 180

Query: 181 YGGAGFHHMGIGGGKGGSGASG 197
           YG  G      G   GG  ASG
Sbjct: 181 YGATGG-----GSDSGGGAASG 186

[Close]

BLAST of Pay0018195 vs. TAIR 10
Match: AT2G13570.1 (nuclear factor Y, subunit B7 )

HSP 1 Score: 168.7 bits (426), Expect = 4.8e-42
Identity = 87/126 (69.05%), Postives = 103/126 (81.75%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           +A+++  S    +N N+  + KEQDRFLPIANV RIMKK LP N KISKDAKETVQECVS
Sbjct: 15  VAETNPGSPSSKTNNNNN-NNKEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVS 74

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISF+TGEASDKCQREKRKTINGDD++WA+TTLGFE+YV PLK YL KYR+ EGEK   
Sbjct: 75  EFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVAPLKVYLCKYRDTEGEKVNS 134

Query: 121 GRQGEK 127
            +Q ++
Sbjct: 135 PKQQQQ 139

[Close]

BLAST of Pay0018195 vs. TAIR 10
Match: AT2G38880.2 (nuclear factor Y, subunit B1 )

HSP 1 Score: 168.3 bits (425), Expect = 6.2e-42
Identity = 89/137 (64.96%), Postives = 106/137 (77.37%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MAD+ +   G    +    S +EQDR+LPIAN+SRIMKKALP N KI KDAK+TVQECVS
Sbjct: 1   MADTPSSPAGDGGESGG--SVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFIT EASDKCQ+EKRKT+NGDDLLWAM TLGFE+Y+EPLK YL +YRE+EG+    
Sbjct: 61  EFISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEGDNKGS 120

Query: 121 GRQGE---KDGGGGGPG 135
           G+ G+   +D GGG  G
Sbjct: 121 GKSGDGSNRDAGGGVSG 135

[Close]

BLAST of Pay0018195 vs. TAIR 10
Match: AT2G38880.3 (nuclear factor Y, subunit B1 )

HSP 1 Score: 168.3 bits (425), Expect = 6.2e-42
Identity = 89/137 (64.96%), Postives = 106/137 (77.37%), Query Frame = 0


Query: 1   MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 60
           MAD+ +   G    +    S +EQDR+LPIAN+SRIMKKALP N KI KDAK+TVQECVS
Sbjct: 1   MADTPSSPAGDGGESGG--SVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVS 60

Query: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTM 120
           EFISFIT EASDKCQ+EKRKT+NGDDLLWAM TLGFE+Y+EPLK YL +YRE+EG+    
Sbjct: 61  EFISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEGDNKGS 120

Query: 121 GRQGE---KDGGGGGPG 135
           G+ G+   +D GGG  G
Sbjct: 121 GKSGDGSNRDAGGGVSG 135

The following BLAST results are available for this feature:

BLAST of Pay0018195 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23310	8.1e-55	75.00	Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q69J40	1.9e-48	61.43	Nuclear transcription factor Y subunit B-10 OS=Oryza sativa subsp. japonica OX=3...	[more]
Q9FGJ3	9.0e-46	60.89	Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q75IZ7	8.4e-44	58.45	Nuclear transcription factor Y subunit B-8 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q0J7P4	9.7e-40	58.82	Nuclear transcription factor Y subunit B-11 OS=Oryza sativa subsp. japonica OX=3...	[more]

BLAST of Pay0018195 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CMC5	6.2e-98	100.00	nuclear transcription factor Y subunit B-3 OS=Cucumis melo OX=3656 GN=LOC1035021...	[more]
A0A5A7V4W8	6.2e-98	100.00	Nuclear transcription factor Y subunit B-3 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0KFU2	2.9e-95	98.51	CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G1124...	[more]
A0A6J1G731	1.3e-82	87.20	nuclear transcription factor Y subunit B-3-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1I2E0	1.6e-82	87.20	nuclear transcription factor Y subunit B-3-like OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Pay0018195 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464158.1	1.3e-97	100.00	PREDICTED: nuclear transcription factor Y subunit B-3 [Cucumis melo] >XP_0084641...	[more]
XP_004139999.1	5.9e-95	98.51	nuclear transcription factor Y subunit B-3 [Cucumis sativus] >KGN46611.1 hypothe...	[more]
XP_038901772.1	4.3e-85	90.20	nuclear transcription factor Y subunit B-3 [Benincasa hispida] >XP_038901773.1 n...	[more]
XP_023532503.1	1.4e-83	88.94	nuclear transcription factor Y subunit B-3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022947534.1	2.6e-82	87.20	nuclear transcription factor Y subunit B-3-like [Cucurbita moschata] >KAG6604918...	[more]

BLAST of Pay0018195 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14540.1	5.8e-56	75.00	nuclear factor Y, subunit B3	[more]
AT5G47640.1	6.4e-47	60.89	nuclear factor Y, subunit B2	[more]
AT2G13570.1	4.8e-42	69.05	nuclear factor Y, subunit B7	[more]
AT2G38880.2	6.2e-42	64.96	nuclear factor Y, subunit B1	[more]
AT2G38880.3	6.2e-42	64.96	nuclear factor Y, subunit B1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00615	CCAATSUBUNTA	coord: 55..73 score: 50.24 coord: 93..111 score: 44.86 coord: 74..92 score: 38.52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR11064:SF128	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-3	coord: 1..175
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 15..132 e-value: 1.1E-47 score: 163.4
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 24..126
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 27..91 e-value: 1.9E-27 score: 95.3
IPR027113	Transcription factor NFYB/HAP3	PANTHER	PTHR11064	CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED	coord: 1..175
IPR003956	Transcription factor, NFYB/HAP3, conserved site	PROSITE	PS00685	NFYB_HAP3	coord: 58..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0018195.1	Pay0018195.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0043565	sequence-specific DNA binding