Pay0018023 (gene) Melon (Payzawat) v1

Overview
NamePay0018023
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr02: 16349406 .. 16350600 (-)
RNA-Seq ExpressionPay0018023
SyntenyPay0018023
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGCAAATGCAAGAGCTTACCTTTATGTAGTCGTGTATTCTACTATATTTAATAGACTTATGGCCTTGGAGTCAGCAAAGGAGATCTGGAAGTTTCTTAAAAGTGAGTATGAAGGTGATGAAAGGATTAAAGGCATGAAGGTGTTGAACTTGGTGCGAGAATTAGAGTGAATCAAATGAAGGATTTTGAGTCCATCACAAAATACTCAAATAAGTTGATTGGGATTGCTAATAAGGCAAGAGCATTAGGAACTGATTTATTTGATAGTAGATTGGTTCAGAAGATTCTGGTTTCAGTACCTGAGCGATATGAAGGAACCATTGCTTCCTTAGAAAATACTAAAGACCTCTCAAAACTCATGGCGATAATAGTAGTTAGTGCTTTGCAAGCACAAGAGCAACGGAGGTTGATGAGGCAAGAAAGAAGCATTGAGGGGGCATTGAAAGTTAGAATGTAGTAGGGAGAAGGTGAAAAAGAGAAGAAGTAAAAAGGGAAGAAGGGAAGTGGCAAAAGTAGCATGGACTCTCTAGCAAGGATGTTGGTAGTGCATGCAAGCACTGTGGGAAGTAGAATCATTCACATTTAAGATGCTGGAGAAGACCAGATGTGAAGTGTAGAAGGTCTCATTTATTGGGGCACATGGAACGATTCTGTAAGGAAGTAAAAACTCAACAGCAAGGAGGAGCACATATTGCAGTATAATAAGAAGAAGATCAACTCTTTGTAGCTACTTGTTTCTCATCAACCACTGAATGTGATGGTTGGTTGGTTGATAGTGGGTGTACCAATCACATGACAAGTGACAAAGAGTTGTTCAAGGACCTTGACATATCATTCAAGTCAAGGGTGAAAATAGGAAATAGTGCGTATTTAGAAGTAAAGGGGAAAGGCACAGTGTCAACAGACAGTTGTGCTGGAACCAAGTTGATTACTAAAGTGTTGTTTATCCCTGAGATTGATCAAAACTTGTTAAACGTTGGTCAACTAGTAGAGAAGGAATTCAAAGTGTTGTTTGAAGAAGGAAAGTGCCTAATTTCTGATTCCAATGGGAATGAGCTCTTCAAAATAAACATGCAACGCAAGAGCTTCTCGTTGAATCTGCTTGAAGAAGAGCAAGTAGCTTTCAAGTGTCAAGTGAATGACACTAAGTTCTGGCATAAGAGGTTGGGCATTTTCATCAGTAAGGGTTGA

mRNA sequence

ATGAAGGCAAATGCAAGAGCTTACCTTTATGTAGTCGTGTATTCTACTATATTTAATAGACTTATGGCCTTGGAGTCAGCAAAGGAGATCTGGAAGTTTCTTAAAAGTGAGTATGAAGGTGATGAAAGGATTAAAGGCATGAAGGTGTTGAACTTGGATTTTGAGTCCATCACAAAATACTCAAATAAGTTGATTGGGATTGCTAATAAGGCAAGAGCATTAGGAACTGATTTATTTGATAGTAGATTGGTTCAGAAGATTCTGGTTTCAGTACCTGAGCGATATGAAGGAACCATTGCTTCCTTAGAAAATACTAAAGACCTCTCAAAACTCATGGCGATAATAGTAGTTAGTGCTTTGCAAGCACAAGAGCAACGGAGGTTGATGAGGCAAGAAAGAAGCATTGAGGGGGCATTGAAAAAGGGAAGTGGCAAAAGTAGCATGGACTCTCTAGCAAGGATGTTGAATCATTCACATTTAAGATGCTGGAGAAGACCAGATGTGAAGTGTAGAAGGTCTCATTTATTGGGGCACATGGAACGATTCTATCAACTCTTTGTAGCTACTTGTTTCTCATCAACCACTGAATGTGATGGTTGGTTGGTTGATAGTGGGTGTACCAATCACATGACAAGTGACAAAGAGTTGTTCAAGGACCTTGACATATCATTCAAGTCAAGGGTGAAAATAGGAAATAGTGCGTATTTAGAAGTAAAGGGGAAAGGCACAGTGTCAACAGACAGTTGTGCTGGAACCAAGTTGATTACTAAAGTGTTGTTTATCCCTGAGATTGATCAAAACTTGTTAAACGTTGGTCAACTAGTAGAGAAGGAATTCAAAGTGTTGTTTGAAGAAGGAAAGTGCCTAATTTCTGATTCCAATGGGAATGAGCTCTTCAAAATAAACATGCAACGCAAGAGCTTCTCGTTGAATCTGCTTGAAGAAGAGCAAGTAGCTTTCAAGTGTCAAGTGAATGACACTAAGTTCTGGCATAAGAGGTTGGGCATTTTCATCAGTAAGGGTTGA

Coding sequence (CDS)

ATGAAGGCAAATGCAAGAGCTTACCTTTATGTAGTCGTGTATTCTACTATATTTAATAGACTTATGGCCTTGGAGTCAGCAAAGGAGATCTGGAAGTTTCTTAAAAGTGAGTATGAAGGTGATGAAAGGATTAAAGGCATGAAGGTGTTGAACTTGGATTTTGAGTCCATCACAAAATACTCAAATAAGTTGATTGGGATTGCTAATAAGGCAAGAGCATTAGGAACTGATTTATTTGATAGTAGATTGGTTCAGAAGATTCTGGTTTCAGTACCTGAGCGATATGAAGGAACCATTGCTTCCTTAGAAAATACTAAAGACCTCTCAAAACTCATGGCGATAATAGTAGTTAGTGCTTTGCAAGCACAAGAGCAACGGAGGTTGATGAGGCAAGAAAGAAGCATTGAGGGGGCATTGAAAAAGGGAAGTGGCAAAAGTAGCATGGACTCTCTAGCAAGGATGTTGAATCATTCACATTTAAGATGCTGGAGAAGACCAGATGTGAAGTGTAGAAGGTCTCATTTATTGGGGCACATGGAACGATTCTATCAACTCTTTGTAGCTACTTGTTTCTCATCAACCACTGAATGTGATGGTTGGTTGGTTGATAGTGGGTGTACCAATCACATGACAAGTGACAAAGAGTTGTTCAAGGACCTTGACATATCATTCAAGTCAAGGGTGAAAATAGGAAATAGTGCGTATTTAGAAGTAAAGGGGAAAGGCACAGTGTCAACAGACAGTTGTGCTGGAACCAAGTTGATTACTAAAGTGTTGTTTATCCCTGAGATTGATCAAAACTTGTTAAACGTTGGTCAACTAGTAGAGAAGGAATTCAAAGTGTTGTTTGAAGAAGGAAAGTGCCTAATTTCTGATTCCAATGGGAATGAGCTCTTCAAAATAAACATGCAACGCAAGAGCTTCTCGTTGAATCTGCTTGAAGAAGAGCAAGTAGCTTTCAAGTGTCAAGTGAATGACACTAAGTTCTGGCATAAGAGGTTGGGCATTTTCATCAGTAAGGGTTGA

Protein sequence

MKANARAYLYVVVYSTIFNRLMALESAKEIWKFLKSEYEGDERIKGMKVLNLDFESITKYSNKLIGIANKARALGTDLFDSRLVQKILVSVPERYEGTIASLENTKDLSKLMAIIVVSALQAQEQRRLMRQERSIEGALKKGSGKSSMDSLARMLNHSHLRCWRRPDVKCRRSHLLGHMERFYQLFVATCFSSTTECDGWLVDSGCTNHMTSDKELFKDLDISFKSRVKIGNSAYLEVKGKGTVSTDSCAGTKLITKVLFIPEIDQNLLNVGQLVEKEFKVLFEEGKCLISDSNGNELFKINMQRKSFSLNLLEEEQVAFKCQVNDTKFWHKRLGIFISKG
Homology
BLAST of Pay0018023 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.7e-04
Identity = 39/150 (26.00%), Postives = 67/150 (44.67%), Query Frame = 0

Query: 192 SSTTECDGWLVDSGCTNHMTSD-KELFKDLDISFKSRVKIGNSAYLEVKGKGTVSTDSCA 251
           +S    + WL+DSG T+H+TSD   L      +    V I + + + +   G+ S  + +
Sbjct: 302 NSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSS 361

Query: 252 GTKLITKVLFIPEIDQNLLNVGQLVE-KEFKVLFEEGKCLISDSN-GNELFKINMQRKSF 311
            +  + KVL++P I +NL++V +L       V F      + D N G  L +   + + +
Sbjct: 362 RSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELY 421

Query: 312 SLNLLEEEQV---AFKCQVNDTKFWHKRLG 336
              +   + V   A  C       WH RLG
Sbjct: 422 EWPIASSQAVSMFASPCSKATHSSWHSRLG 451

BLAST of Pay0018023 vs. ExPASy Swiss-Prot
Match: P25601 (Putative transposon Ty5-1 protein YCL075W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5B PE=5 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 5.0e-04
Identity = 23/77 (29.87%), Postives = 40/77 (51.95%), Query Frame = 0

Query: 195 TECDGWLVDSGCTNHMTSDKELFKDLDISFKSRVKIGNSAYLEVKGKGTVSTDSCAGTKL 254
           T+   W+ D+GCT+HM  D+ +F     S +     G    + + G GTV+     GT  
Sbjct: 74  TKSSEWIFDTGCTSHMCHDRSIFSSFTRSSRKDFVRGVGGSIPIMGSGTVN----IGTVQ 133

Query: 255 ITKVLFIPEIDQNLLNV 272
           +  V ++P++  NL++V
Sbjct: 134 LHDVSYVPDLPVNLISV 146

BLAST of Pay0018023 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 8.5e-04
Identity = 75/377 (19.89%), Postives = 144/377 (38.20%), Query Frame = 0

Query: 17  IFNRLMALESAKEIWKFLKSEYEGDERI------KGMKVLNL-DFESITKYSNKLIGIAN 76
           + N ++  ++A+ IW  L+S Y            K +  L++ +  +   + N   G+  
Sbjct: 71  VVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNGLIT 130

Query: 77  KARALGTDLFDSRLVQKILVSVPERYEGTIASLENTKDLSKLMAIIVVSALQAQEQRRLM 136
           +   LG  + +      +L S+P  Y+    ++ + K   +L    V SAL   E+ R  
Sbjct: 131 QLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKD--VTSALLLNEKMR-K 190

Query: 137 RQERSIEGALKKGSGKS---SMDSLARMLNHSHLRCWRRPDVK-CRRSHLLGHMER---- 196
           + E   +  + +G G+S   S ++  R       +   +  V+ C   +  GH +R    
Sbjct: 191 KPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQPGHFKRDCPN 250

Query: 197 -------------------------FYQLFV---ATCFSSTTECDGWLVDSGCTNHMTSD 256
                                       LF+     C   +     W+VD+  ++H T  
Sbjct: 251 PRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAASHHATPV 310

Query: 257 KELFKDLDISFKSRVKIGNSAYLEVKGKGTVSTDSCAGTKLITK-VLFIPEIDQNLLNVG 316
           ++LF          VK+GN++Y ++ G G +   +  G  L+ K V  +P++  NL++  
Sbjct: 311 RDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGI 370

Query: 317 QLVEKEFKVLFEEGKCLISDSN--------GNELFKINMQRKSFSLNLLEEEQVAFKCQV 342
            L    ++  F   K  ++  +           L++ N +     LN  ++E        
Sbjct: 371 ALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAEICQGELNAAQDE-------- 430

BLAST of Pay0018023 vs. ExPASy TrEMBL
Match: A0A5D3BE46 (Putative transposon Ty5-1 protein YCL075W family OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold222G00220 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 3.3e-115
Identity = 242/341 (70.97%), Postives = 242/341 (70.97%), Query Frame = 0

Query: 1   MKANARAYLYVVVYSTIFNRLMALESAKEIWKFLKSEYEGDERIKGMKVLNLDFESITKY 60
           MKANARAYLYVVVYSTIFNRLMALESAKEIWKFLKSEYEGDERIKGM             
Sbjct: 41  MKANARAYLYVVVYSTIFNRLMALESAKEIWKFLKSEYEGDERIKGM------------- 100

Query: 61  SNKLIGIANKARALGTDLFDSRLVQKILVSVPERYEGTIASLENTKDLSKLMAIIVVSAL 120
                    KARALGTDLFDSRLVQKILVSVPERYEGTIASLENTKDLSKLMAIIVVSAL
Sbjct: 101 ---------KARALGTDLFDSRLVQKILVSVPERYEGTIASLENTKDLSKLMAIIVVSAL 160

Query: 121 QAQEQRRLMRQERSIEGALKKGSGKSSMDSLARMLNHSHLRCWRRPDVKCRRSHLLGHME 180
           QAQEQR                                                      
Sbjct: 161 QAQEQR------------------------------------------------------ 220

Query: 181 RFYQLFVATCFSSTTECDGWLVDSGCTNHMTSDKELFKDLDISFKSRVKIGNSAYLEVKG 240
                                  SGCTNHMTSDKELFKDLDISFKSRVKIGNSAYLEVKG
Sbjct: 221 -----------------------SGCTNHMTSDKELFKDLDISFKSRVKIGNSAYLEVKG 280

Query: 241 KGTVSTDSCAGTKLITKVLFIPEIDQNLLNVGQLVEKEFKVLFEEGKCLISDSNGNELFK 300
           KGTVSTDSCAGTKLITKVLFIPEIDQNLLNVGQLVEKEFKVLFEEGKCLISDSNGNELFK
Sbjct: 281 KGTVSTDSCAGTKLITKVLFIPEIDQNLLNVGQLVEKEFKVLFEEGKCLISDSNGNELFK 282

Query: 301 INMQRKSFSLNLLEEEQVAFKCQVNDTKFWHKRLGIFISKG 342
           INMQRKSFSLNLLEEEQVAFKCQVNDTKFWHKRLGIFISKG
Sbjct: 341 INMQRKSFSLNLLEEEQVAFKCQVNDTKFWHKRLGIFISKG 282

BLAST of Pay0018023 vs. ExPASy TrEMBL
Match: A0A6J1DWT9 (uncharacterized protein LOC111025149 OS=Momordica charantia OX=3673 GN=LOC111025149 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 3.3e-115
Identity = 237/370 (64.05%), Postives = 260/370 (70.27%), Query Frame = 0

Query: 2   KANARAYLYVVVYSTIFNRLMALESAKEIWKFLKSEYEGDERIKGMKVLNL--------- 61
           KA ARA LY  V   IFNR+MAL+SAKEIW+FLKSEYEGDERIKGMKVLNL         
Sbjct: 69  KAKARACLYAAVSPAIFNRIMALKSAKEIWEFLKSEYEGDERIKGMKVLNLVREFERIQM 128

Query: 62  -DFESITKYSNKLIGIANKARALGTDLFDSRLVQKILVSVPERYEGTIASLENTKDLSKL 121
            D ESI +YS+KLIGIANKARALG DL ++RLVQKI+VSVPERYE TIASLEN+KDL+KL
Sbjct: 129 KDSESIKEYSDKLIGIANKARALGIDLSNNRLVQKIMVSVPERYEATIASLENSKDLTKL 188

Query: 122 MAIIVVSALQAQEQRRLMRQERSIEGALKKGSGKSSMDSLARMLNHSHLRCWRRPDVKCR 181
             I VVSALQAQ QR                                  RCWRRPDVK R
Sbjct: 189 KVIEVVSALQAQAQR----------------------------------RCWRRPDVKXR 248

Query: 182 RSHLLGHMERFY--------------------QLFVATCFSSTTECDGWLVDSGCTNHMT 241
           R HLLGH+ERF                     QLFVATCFSS T+CD WLVDSGCTN M 
Sbjct: 249 RCHLLGHIERFCKEAKTQQQGGAHAAVQQEEDQLFVATCFSSVTQCDSWLVDSGCTNXMX 308

Query: 242 SDKELFKDLDISFKSRVKIGNSAYLEVKGKGTVSTDSCAGTKLITKVLFIPEIDQNLLNV 301
           SDKELFKDLD SFKSRVKIGN  YLEVKGK T S +SC GTKLIT+VLF+P I QNLL+V
Sbjct: 309 SDKELFKDLDRSFKSRVKIGNGEYLEVKGKXTXSIESCVGTKLITEVLFVPXIAQNLLSV 368

Query: 302 GQLVEKEFKVLFEEGKCLISDSNGNELFKINMQRKSFSLNLLEEEQVAFKCQVNDTKFWH 342
           GQLVEK FKVLFE  KCLISDSNGNE FKI MQ KSFSL+ +E++Q+  KCQVNDT+  H
Sbjct: 369 GQLVEKGFKVLFEYEKCLISDSNGNEWFKIKMQHKSFSLDPVEKDQIVSKCQVNDTELRH 404

BLAST of Pay0018023 vs. ExPASy TrEMBL
Match: A0A6J1D394 (uncharacterized protein LOC111016891 OS=Momordica charantia OX=3673 GN=LOC111016891 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.6e-114
Identity = 238/364 (65.38%), Postives = 263/364 (72.25%), Query Frame = 0

Query: 2   KANARAYLYVVVYSTIFNRLMALESAKEIWKFLKSEYEGDERIKGMKVLNL--------- 61
           K  A A L   V   IFNR+MAL+SAKEIW+FLK+EYEG+ERIKGMKVLNL         
Sbjct: 38  KEKAXACLDAAVSPAIFNRIMALKSAKEIWEFLKNEYEGNERIKGMKVLNLVREFEXMQM 97

Query: 62  -DFESITKYSNKLIGIANKARALGTDLFDSRLVQKILVSVPERYEGTIASLENTKDLSKL 121
            D ESI +YS+KLIGIANKARALGTDL  +RLVQKILVSVPERYE TIASLENTKDLSKL
Sbjct: 98  KDSESIKEYSDKLIGIANKARALGTDLSXNRLVQKILVSVPERYEATIASLENTKDLSKL 157

Query: 122 MAIIVVSALQAQEQRRLMRQERSIEGAL-----------------KKGSGKSSMDSLARM 181
             I VVS LQAQEQRRL+ QE S+EGAL                 KK SG SS +  ++ 
Sbjct: 158 KVIEVVSVLQAQEQRRLIWQEGSMEGALKARMQXGEGGRETKWKGKKASGSSSSEFASKD 217

Query: 182 L----------NHSHLRCWRRPDVKCRRSHLLGHMERFY--------------------Q 241
           +          NH H RCWRRP VKCR  +LLGH+ERFY                    Q
Sbjct: 218 VGSACKHCGKHNHPHFRCWRRPYVKCRSCNLLGHIERFYKGAKTQQQGGAHAAVQQEEDQ 277

Query: 242 LFVATCFSSTTECDGWLVDSGCTNHMTSDKELFKDLDISFKSRVKIGNSAYLEVKGKGTV 301
           LFVATCFSST +CDGWLVDSGCTNHMTSDKELFKDLD SFKSRVKI N  YLEVKGKGTV
Sbjct: 278 LFVATCFSSTNQCDGWLVDSGCTNHMTSDKELFKDLDKSFKSRVKIENGEYLEVKGKGTV 337

Query: 302 STDSCAGTKLITKVLFIPEIDQNLLNVGQLVEKEFKVLFEEGKCLISDSNGNELFKINMQ 309
           S +SC GTKLI +VLF+PEIDQNLL+VGQLV+K FKVLFE+ KCLISDS+GNELF+I MQ
Sbjct: 338 SIESCVGTKLINEVLFVPEIDQNLLSVGQLVDKGFKVLFEDRKCLISDSSGNELFRIKMQ 397

BLAST of Pay0018023 vs. ExPASy TrEMBL
Match: A0A1S3BNQ3 (uncharacterized protein LOC103491872 OS=Cucumis melo OX=3656 GN=LOC103491872 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 9.2e-102
Identity = 214/312 (68.59%), Postives = 233/312 (74.68%), Query Frame = 0

Query: 1   MKANARAYLYVVVYSTIFNRLMALESAKEIWKFLKSEYEGDERIKGMKVLNL-------- 60
           MKA ARA L+  V   IFNRLMALESAKEIW+FLKSEYEG ERIKGMKVLNL        
Sbjct: 1   MKAKARACLHTAVSPVIFNRLMALESAKEIWEFLKSEYEGGERIKGMKVLNLMREFERMQ 60

Query: 61  --DFESITKYSNKLIGIANKARALGTDLFDSRLVQKILVSVPERYEGTIASLENTKDLSK 120
             D +SIT+YS+KLIGIANK RALG DL DSRLVQKILVSVP+RYE TIASLENTKDLSK
Sbjct: 61  IKDSKSITEYSDKLIGIANKERALGRDLSDSRLVQKILVSVPKRYEATIASLENTKDLSK 120

Query: 121 LMAIIVVSALQAQEQRRLMRQERSIEGALK-----------------KGSGKSSMDSLAR 180
           L  I VVSALQ QEQRRLMRQE SIEGALK                 KG+GKSSM+SLA+
Sbjct: 121 LKVIEVVSALQKQEQRRLMRQEGSIEGALKARMQQGEGGKEKKWKGNKGNGKSSMESLAK 180

Query: 181 ML----------NHSHLRCWRRPDVKCRRSHLLGHMERF-------YQLFVATCFSSTTE 240
            +          NH H RCWR PDVKCR +H       +       YQLFVATCFSSTT+
Sbjct: 181 DVGSACKHYGKQNHPHFRCWRMPDVKCRSNHSTVRRSTYTAVQQEEYQLFVATCFSSTTQ 240

Query: 241 CDGWLVDSGCTNHMTSDKELFKDLDISFKSRVKIGNSAYLEVKGKGTVSTDSCAGTKLIT 269
            DGWLVDSGCTNHMTS K+LFK+LD SFKSR+KIGN AYLEVKGKGTVS +SCAGTKLIT
Sbjct: 241 YDGWLVDSGCTNHMTSYKDLFKELDTSFKSRMKIGNGAYLEVKGKGTVSIESCAGTKLIT 300

BLAST of Pay0018023 vs. ExPASy TrEMBL
Match: A0A5D3C1N2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00920 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.9e-99
Identity = 228/378 (60.32%), Postives = 250/378 (66.14%), Query Frame = 0

Query: 1   MKANARAYLYVVVYSTIFNRLMALESAKEIWKFLKSEYEGDERIKGMKVLNL-------- 60
           MKA ARA L+  V S IFN+LMALESAKEIW+FLKSEYEG ERIKGMKVLNL        
Sbjct: 1   MKAKARACLHTAVSSVIFNKLMALESAKEIWEFLKSEYEGGERIKGMKVLNLMREFERMQ 60

Query: 61  --DFESITKYSNKLIGIANKARALGTDLFDSRLVQKILVSVPERYEGTIASLENTKDLSK 120
             D +SIT+YS+KLIGIANK RALG DL DSRLVQKILVSVP+RYE TIASLENTKDLSK
Sbjct: 61  IKDSKSITEYSDKLIGIANKERALGRDLSDSRLVQKILVSVPKRYEATIASLENTKDLSK 120

Query: 121 LMAIIVVSALQAQEQRRLMRQERSIEGALK-----------------KGSGKSSMDSLAR 180
           L  I VVS LQ QEQRRLMRQE SIEGALK                 KG+GKSS +SLA+
Sbjct: 121 LKVIEVVSVLQKQEQRRLMRQEGSIEGALKARMQQGEGGKEKKWKGNKGNGKSSTESLAK 180

Query: 181 ML----------NHSHLRCWRRPDVKCRRSHLLGHMERFYQLFVATCFSSTTECDGWLVD 240
            +          NH H RCWR PDVKCRR +LLGH+ER        C + TT+       
Sbjct: 181 DVGSACKHYGKQNHPHFRCWRMPDVKCRRFYLLGHIERL-------CKAVTTQ------- 240

Query: 241 SGCTNHMTSDKELFKDLDISFKSRVKIGNSAYLEVKGKGTVSTDSCAGTKLITKVLFIPE 300
            GCTNHMTS K+LFKDLD SFKSR+KIGN AYLEVKGKGTVS +SCAGTKLIT+VLF+PE
Sbjct: 241 HGCTNHMTSYKDLFKDLDTSFKSRMKIGNGAYLEVKGKGTVSIESCAGTKLITEVLFVPE 300

Query: 301 IDQNLLNVGQLVEKEFKVLFEEGKCLISDSNGNELFKINMQRKSFSLNLLEEEQVAFKCQ 342
           IDQNL                           N LFKI MQ KSFSL+ LEEE+VAF   
Sbjct: 301 IDQNL---------------------------NALFKIKMQHKSFSLDPLEEEEVAF--- 326

BLAST of Pay0018023 vs. NCBI nr
Match: TYJ98110.1 (putative transposon Ty5-1 protein YCL075W family [Cucumis melo var. makuwa])

HSP 1 Score: 424.9 bits (1091), Expect = 6.7e-115
Identity = 242/341 (70.97%), Postives = 242/341 (70.97%), Query Frame = 0

Query: 1   MKANARAYLYVVVYSTIFNRLMALESAKEIWKFLKSEYEGDERIKGMKVLNLDFESITKY 60
           MKANARAYLYVVVYSTIFNRLMALESAKEIWKFLKSEYEGDERIKGM             
Sbjct: 41  MKANARAYLYVVVYSTIFNRLMALESAKEIWKFLKSEYEGDERIKGM------------- 100

Query: 61  SNKLIGIANKARALGTDLFDSRLVQKILVSVPERYEGTIASLENTKDLSKLMAIIVVSAL 120
                    KARALGTDLFDSRLVQKILVSVPERYEGTIASLENTKDLSKLMAIIVVSAL
Sbjct: 101 ---------KARALGTDLFDSRLVQKILVSVPERYEGTIASLENTKDLSKLMAIIVVSAL 160

Query: 121 QAQEQRRLMRQERSIEGALKKGSGKSSMDSLARMLNHSHLRCWRRPDVKCRRSHLLGHME 180
           QAQEQR                                                      
Sbjct: 161 QAQEQR------------------------------------------------------ 220

Query: 181 RFYQLFVATCFSSTTECDGWLVDSGCTNHMTSDKELFKDLDISFKSRVKIGNSAYLEVKG 240
                                  SGCTNHMTSDKELFKDLDISFKSRVKIGNSAYLEVKG
Sbjct: 221 -----------------------SGCTNHMTSDKELFKDLDISFKSRVKIGNSAYLEVKG 280

Query: 241 KGTVSTDSCAGTKLITKVLFIPEIDQNLLNVGQLVEKEFKVLFEEGKCLISDSNGNELFK 300
           KGTVSTDSCAGTKLITKVLFIPEIDQNLLNVGQLVEKEFKVLFEEGKCLISDSNGNELFK
Sbjct: 281 KGTVSTDSCAGTKLITKVLFIPEIDQNLLNVGQLVEKEFKVLFEEGKCLISDSNGNELFK 282

Query: 301 INMQRKSFSLNLLEEEQVAFKCQVNDTKFWHKRLGIFISKG 342
           INMQRKSFSLNLLEEEQVAFKCQVNDTKFWHKRLGIFISKG
Sbjct: 341 INMQRKSFSLNLLEEEQVAFKCQVNDTKFWHKRLGIFISKG 282

BLAST of Pay0018023 vs. NCBI nr
Match: XP_022158688.1 (uncharacterized protein LOC111025149 [Momordica charantia])

HSP 1 Score: 424.9 bits (1091), Expect = 6.7e-115
Identity = 237/370 (64.05%), Postives = 260/370 (70.27%), Query Frame = 0

Query: 2   KANARAYLYVVVYSTIFNRLMALESAKEIWKFLKSEYEGDERIKGMKVLNL--------- 61
           KA ARA LY  V   IFNR+MAL+SAKEIW+FLKSEYEGDERIKGMKVLNL         
Sbjct: 69  KAKARACLYAAVSPAIFNRIMALKSAKEIWEFLKSEYEGDERIKGMKVLNLVREFERIQM 128

Query: 62  -DFESITKYSNKLIGIANKARALGTDLFDSRLVQKILVSVPERYEGTIASLENTKDLSKL 121
            D ESI +YS+KLIGIANKARALG DL ++RLVQKI+VSVPERYE TIASLEN+KDL+KL
Sbjct: 129 KDSESIKEYSDKLIGIANKARALGIDLSNNRLVQKIMVSVPERYEATIASLENSKDLTKL 188

Query: 122 MAIIVVSALQAQEQRRLMRQERSIEGALKKGSGKSSMDSLARMLNHSHLRCWRRPDVKCR 181
             I VVSALQAQ QR                                  RCWRRPDVK R
Sbjct: 189 KVIEVVSALQAQAQR----------------------------------RCWRRPDVKXR 248

Query: 182 RSHLLGHMERFY--------------------QLFVATCFSSTTECDGWLVDSGCTNHMT 241
           R HLLGH+ERF                     QLFVATCFSS T+CD WLVDSGCTN M 
Sbjct: 249 RCHLLGHIERFCKEAKTQQQGGAHAAVQQEEDQLFVATCFSSVTQCDSWLVDSGCTNXMX 308

Query: 242 SDKELFKDLDISFKSRVKIGNSAYLEVKGKGTVSTDSCAGTKLITKVLFIPEIDQNLLNV 301
           SDKELFKDLD SFKSRVKIGN  YLEVKGK T S +SC GTKLIT+VLF+P I QNLL+V
Sbjct: 309 SDKELFKDLDRSFKSRVKIGNGEYLEVKGKXTXSIESCVGTKLITEVLFVPXIAQNLLSV 368

Query: 302 GQLVEKEFKVLFEEGKCLISDSNGNELFKINMQRKSFSLNLLEEEQVAFKCQVNDTKFWH 342
           GQLVEK FKVLFE  KCLISDSNGNE FKI MQ KSFSL+ +E++Q+  KCQVNDT+  H
Sbjct: 369 GQLVEKGFKVLFEYEKCLISDSNGNEWFKIKMQHKSFSLDPVEKDQIVSKCQVNDTELRH 404

BLAST of Pay0018023 vs. NCBI nr
Match: XP_022148138.1 (uncharacterized protein LOC111016891 [Momordica charantia])

HSP 1 Score: 422.5 bits (1085), Expect = 3.3e-114
Identity = 238/364 (65.38%), Postives = 263/364 (72.25%), Query Frame = 0

Query: 2   KANARAYLYVVVYSTIFNRLMALESAKEIWKFLKSEYEGDERIKGMKVLNL--------- 61
           K  A A L   V   IFNR+MAL+SAKEIW+FLK+EYEG+ERIKGMKVLNL         
Sbjct: 38  KEKAXACLDAAVSPAIFNRIMALKSAKEIWEFLKNEYEGNERIKGMKVLNLVREFEXMQM 97

Query: 62  -DFESITKYSNKLIGIANKARALGTDLFDSRLVQKILVSVPERYEGTIASLENTKDLSKL 121
            D ESI +YS+KLIGIANKARALGTDL  +RLVQKILVSVPERYE TIASLENTKDLSKL
Sbjct: 98  KDSESIKEYSDKLIGIANKARALGTDLSXNRLVQKILVSVPERYEATIASLENTKDLSKL 157

Query: 122 MAIIVVSALQAQEQRRLMRQERSIEGAL-----------------KKGSGKSSMDSLARM 181
             I VVS LQAQEQRRL+ QE S+EGAL                 KK SG SS +  ++ 
Sbjct: 158 KVIEVVSVLQAQEQRRLIWQEGSMEGALKARMQXGEGGRETKWKGKKASGSSSSEFASKD 217

Query: 182 L----------NHSHLRCWRRPDVKCRRSHLLGHMERFY--------------------Q 241
           +          NH H RCWRRP VKCR  +LLGH+ERFY                    Q
Sbjct: 218 VGSACKHCGKHNHPHFRCWRRPYVKCRSCNLLGHIERFYKGAKTQQQGGAHAAVQQEEDQ 277

Query: 242 LFVATCFSSTTECDGWLVDSGCTNHMTSDKELFKDLDISFKSRVKIGNSAYLEVKGKGTV 301
           LFVATCFSST +CDGWLVDSGCTNHMTSDKELFKDLD SFKSRVKI N  YLEVKGKGTV
Sbjct: 278 LFVATCFSSTNQCDGWLVDSGCTNHMTSDKELFKDLDKSFKSRVKIENGEYLEVKGKGTV 337

Query: 302 STDSCAGTKLITKVLFIPEIDQNLLNVGQLVEKEFKVLFEEGKCLISDSNGNELFKINMQ 309
           S +SC GTKLI +VLF+PEIDQNLL+VGQLV+K FKVLFE+ KCLISDS+GNELF+I MQ
Sbjct: 338 SIESCVGTKLINEVLFVPEIDQNLLSVGQLVDKGFKVLFEDRKCLISDSSGNELFRIKMQ 397

BLAST of Pay0018023 vs. NCBI nr
Match: XP_008450210.1 (PREDICTED: uncharacterized protein LOC103491872 [Cucumis melo])

HSP 1 Score: 380.2 bits (975), Expect = 1.9e-101
Identity = 214/312 (68.59%), Postives = 233/312 (74.68%), Query Frame = 0

Query: 1   MKANARAYLYVVVYSTIFNRLMALESAKEIWKFLKSEYEGDERIKGMKVLNL-------- 60
           MKA ARA L+  V   IFNRLMALESAKEIW+FLKSEYEG ERIKGMKVLNL        
Sbjct: 1   MKAKARACLHTAVSPVIFNRLMALESAKEIWEFLKSEYEGGERIKGMKVLNLMREFERMQ 60

Query: 61  --DFESITKYSNKLIGIANKARALGTDLFDSRLVQKILVSVPERYEGTIASLENTKDLSK 120
             D +SIT+YS+KLIGIANK RALG DL DSRLVQKILVSVP+RYE TIASLENTKDLSK
Sbjct: 61  IKDSKSITEYSDKLIGIANKERALGRDLSDSRLVQKILVSVPKRYEATIASLENTKDLSK 120

Query: 121 LMAIIVVSALQAQEQRRLMRQERSIEGALK-----------------KGSGKSSMDSLAR 180
           L  I VVSALQ QEQRRLMRQE SIEGALK                 KG+GKSSM+SLA+
Sbjct: 121 LKVIEVVSALQKQEQRRLMRQEGSIEGALKARMQQGEGGKEKKWKGNKGNGKSSMESLAK 180

Query: 181 ML----------NHSHLRCWRRPDVKCRRSHLLGHMERF-------YQLFVATCFSSTTE 240
            +          NH H RCWR PDVKCR +H       +       YQLFVATCFSSTT+
Sbjct: 181 DVGSACKHYGKQNHPHFRCWRMPDVKCRSNHSTVRRSTYTAVQQEEYQLFVATCFSSTTQ 240

Query: 241 CDGWLVDSGCTNHMTSDKELFKDLDISFKSRVKIGNSAYLEVKGKGTVSTDSCAGTKLIT 269
            DGWLVDSGCTNHMTS K+LFK+LD SFKSR+KIGN AYLEVKGKGTVS +SCAGTKLIT
Sbjct: 241 YDGWLVDSGCTNHMTSYKDLFKELDTSFKSRMKIGNGAYLEVKGKGTVSIESCAGTKLIT 300

BLAST of Pay0018023 vs. NCBI nr
Match: KAA0042872.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK05275.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 372.5 bits (955), Expect = 4.0e-99
Identity = 228/378 (60.32%), Postives = 250/378 (66.14%), Query Frame = 0

Query: 1   MKANARAYLYVVVYSTIFNRLMALESAKEIWKFLKSEYEGDERIKGMKVLNL-------- 60
           MKA ARA L+  V S IFN+LMALESAKEIW+FLKSEYEG ERIKGMKVLNL        
Sbjct: 1   MKAKARACLHTAVSSVIFNKLMALESAKEIWEFLKSEYEGGERIKGMKVLNLMREFERMQ 60

Query: 61  --DFESITKYSNKLIGIANKARALGTDLFDSRLVQKILVSVPERYEGTIASLENTKDLSK 120
             D +SIT+YS+KLIGIANK RALG DL DSRLVQKILVSVP+RYE TIASLENTKDLSK
Sbjct: 61  IKDSKSITEYSDKLIGIANKERALGRDLSDSRLVQKILVSVPKRYEATIASLENTKDLSK 120

Query: 121 LMAIIVVSALQAQEQRRLMRQERSIEGALK-----------------KGSGKSSMDSLAR 180
           L  I VVS LQ QEQRRLMRQE SIEGALK                 KG+GKSS +SLA+
Sbjct: 121 LKVIEVVSVLQKQEQRRLMRQEGSIEGALKARMQQGEGGKEKKWKGNKGNGKSSTESLAK 180

Query: 181 ML----------NHSHLRCWRRPDVKCRRSHLLGHMERFYQLFVATCFSSTTECDGWLVD 240
            +          NH H RCWR PDVKCRR +LLGH+ER        C + TT+       
Sbjct: 181 DVGSACKHYGKQNHPHFRCWRMPDVKCRRFYLLGHIERL-------CKAVTTQ------- 240

Query: 241 SGCTNHMTSDKELFKDLDISFKSRVKIGNSAYLEVKGKGTVSTDSCAGTKLITKVLFIPE 300
            GCTNHMTS K+LFKDLD SFKSR+KIGN AYLEVKGKGTVS +SCAGTKLIT+VLF+PE
Sbjct: 241 HGCTNHMTSYKDLFKDLDTSFKSRMKIGNGAYLEVKGKGTVSIESCAGTKLITEVLFVPE 300

Query: 301 IDQNLLNVGQLVEKEFKVLFEEGKCLISDSNGNELFKINMQRKSFSLNLLEEEQVAFKCQ 342
           IDQNL                           N LFKI MQ KSFSL+ LEEE+VAF   
Sbjct: 301 IDQNL---------------------------NALFKIKMQHKSFSLDPLEEEEVAF--- 326

BLAST of Pay0018023 vs. TAIR 10
Match: AT3G20980.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 63.2 bits (152), Expect = 4.8e-10
Identity = 45/127 (35.43%), Postives = 62/127 (48.82%), Query Frame = 0

Query: 187 VATCFSSTTECDG-WLVDSGCTNHMTSDKELFKDLDISFKSRVKI-----GNSAYLEVKG 246
           VA CFS  T  +  WL+ S  +NHMT   + F  LD S K +VK        +    V+G
Sbjct: 255 VAECFSKYTFHENIWLISSTNSNHMTPHVKFFTTLDRSRKCKVKFISGDKSETTVAMVEG 314

Query: 247 KGTVSTDSCAGTKLITKVLFIPEIDQNLLNVGQLVEKEFKVLFEEGK-CLISDSNGNELF 306
            G V+  +  G K I  VL++P I+ N L+V QL    F+V  E    C + D    ++F
Sbjct: 315 IGDVTFITNEGNKTIKNVLYVPGIEGNALSVSQLKRNGFEVSMERRTGCFVWDRTTGKMF 374

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9ZT941.7e-0426.00Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P256015.0e-0429.87Putative transposon Ty5-1 protein YCL075W OS=Saccharomyces cerevisiae (strain AT... [more]
P109788.5e-0419.89Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
Match NameE-valueIdentityDescription
A0A5D3BE463.3e-11570.97Putative transposon Ty5-1 protein YCL075W family OS=Cucumis melo var. makuwa OX=... [more]
A0A6J1DWT93.3e-11564.05uncharacterized protein LOC111025149 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1D3941.6e-11465.38uncharacterized protein LOC111016891 OS=Momordica charantia OX=3673 GN=LOC111016... [more]
A0A1S3BNQ39.2e-10268.59uncharacterized protein LOC103491872 OS=Cucumis melo OX=3656 GN=LOC103491872 PE=... [more]
A0A5D3C1N21.9e-9960.32Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
Match NameE-valueIdentityDescription
TYJ98110.16.7e-11570.97putative transposon Ty5-1 protein YCL075W family [Cucumis melo var. makuwa][more]
XP_022158688.16.7e-11564.05uncharacterized protein LOC111025149 [Momordica charantia][more]
XP_022148138.13.3e-11465.38uncharacterized protein LOC111016891 [Momordica charantia][more]
XP_008450210.11.9e-10168.59PREDICTED: uncharacterized protein LOC103491872 [Cucumis melo][more]
KAA0042872.14.0e-9960.32Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
Match NameE-valueIdentityDescription
AT3G20980.14.8e-1035.43Gag-Pol-related retrotransposon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 3..128
e-value: 6.6E-14
score: 51.8
NoneNo IPR availablePANTHERPTHR35317:SF11SUBFAMILY NOT NAMEDcoord: 2..247
NoneNo IPR availablePANTHERPTHR35317OS04G0629600 PROTEINcoord: 2..247

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0018023.1Pay0018023.1mRNA