Pay0017965 (gene) Melon (Payzawat) v1

Overview


Name	Pay0017965
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Unknown protein
Location	chr11: 16218849 .. 16219409 (-)
RNA-Seq Expression	Pay0017965
Synteny	Pay0017965

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTCCCTATAAATATGTTCACTACTCCTCACTGAGCCCATAGTTTTCATTCCCAACCAACAAAGCTCCGAGGACGACACCATGGTTTTCTTTTGCTTTATGGTGGATCAGAAGCGGAAGGTGCGGCGGAGTAGGCCGGCGCCTGGAATTTGCTCCAGATGCGGCGGAGGAGCCAGCGTTGCCGATATGAAAACCGCTACGAGATTCTGTCATGTTCCCTTTTATTGTAAATCTTGGAGAGCCCTCATCTGTACCTTTTGTGGATCTGTTCTTCGATCTTATCGCTAATTTATTTATTTCCTTCTAATTTTTCAATGTTTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTTCATCTTAGACACTAATTTTAATTTAACATGCCTTATTGCATGTAGTCGGAATTTGTTCATTTTATAGCTCAATGGCTTGTTCCTTCTTTTTGATCTACTTGAAAGAAAGGATAAAGAAAAAGAATACCCAGAAGAATCTTAATTTGATACTGGTAATTTATTATTGAAGTTGGATCTTATCA

mRNA sequence

CGTCCCTATAAATATGTTCACTACTCCTCACTGAGCCCATAGTTTTCATTCCCAACCAACAAAGCTCCGAGGACGACACCATGGTTTTCTTTTGCTTTATGGTGGATCAGAAGCGGAAGGTGCGGCGGAGTAGGCCGGCGCCTGGAATTTGCTCCAGATGCGGCGGAGGAGCCAGCGTTGCCGATATGAAAACCGCTACGAGATTCTGTCATGTTCCCTTTTATTGTAAATCTTGGAGAGCCCTCATCTGTACCTTTTGTGGATCTGTTCTTCGATCTTATCGCTAATTTATTTATTTCCTTCTAATTTTTCAATGTTTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTTCATCTTAGACACTAATTTTAATTTAACATGCCTTATTGCATGTAGTCGGAATTTGTTCATTTTATAGCTCAATGGCTTGTTCCTTCTTTTTGATCTACTTGAAAGAAAGGATAAAGAAAAAGAATACCCAGAAGAATCTTAATTTGATACTGGTAATTTATTATTGAAGTTGGATCTTATCA

Coding sequence (CDS)

ATGGTTTTCTTTTGCTTTATGGTGGATCAGAAGCGGAAGGTGCGGCGGAGTAGGCCGGCGCCTGGAATTTGCTCCAGATGCGGCGGAGGAGCCAGCGTTGCCGATATGAAAACCGCTACGAGATTCTGTCATGTTCCCTTTTATTGTAAATCTTGGAGAGCCCTCATCTGTACCTTTTGTGGATCTGTTCTTCGATCTTATCGCTAA

Protein sequence

MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYCKSWRALICTFCGSVLRSYR

Homology

[Close]

BLAST of Pay0017965 vs. ExPASy TrEMBL
Match: A0A1S3BJR8 (uncharacterized protein LOC103490465 OS=Cucumis melo OX=3656 GN=LOC103490465 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.4e-32
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYCKSWRALICTFC 60
          MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFY KSWRALICTFC
Sbjct: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC 60

Query: 61 GSVLRSYR 69
          GSVLRSYR
Sbjct: 61 GSVLRSYR 68

[Close]

BLAST of Pay0017965 vs. ExPASy TrEMBL
Match: A0A6J1FUH3 (uncharacterized protein LOC111448908 OS=Cucurbita moschata OX=3662 GN=LOC111448908 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.9e-30
Identity = 63/68 (92.65%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYCKSWRALICTFC 60
          MV FCF+VDQKR++RRSRPAPGICSRCGGGASVADMKTATRFCHVPFY KSWRALICTFC
Sbjct: 1  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC 60

Query: 61 GSVLRSYR 69
          GSVLRSYR
Sbjct: 61 GSVLRSYR 68

[Close]

BLAST of Pay0017965 vs. ExPASy TrEMBL
Match: A0A6J1J7G8 (uncharacterized protein LOC111484159 OS=Cucurbita maxima OX=3661 GN=LOC111484159 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 5.5e-30
Identity = 62/68 (91.18%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYCKSWRALICTFC 60
          MV FCF+VDQKR+++RSRPAPGICSRCGGGASVADMKTATRFCHVPFY KSWRALICTFC
Sbjct: 1  MVCFCFLVDQKRRIQRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC 60

Query: 61 GSVLRSYR 69
          GSVLRSYR
Sbjct: 61 GSVLRSYR 68

[Close]

BLAST of Pay0017965 vs. ExPASy TrEMBL
Match: A0A6J1CFS7 (uncharacterized protein LOC111011282 OS=Momordica charantia OX=3673 GN=LOC111011282 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.1e-29
Identity = 61/68 (89.71%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYCKSWRALICTFC 60
          MV FCF+VD+KR+VRRSRPAPGICSRCGGGA VADMKTATRFCHVPFY KSWRA+ICTFC
Sbjct: 1  MVCFCFLVDEKRRVRRSRPAPGICSRCGGGARVADMKTATRFCHVPFYWKSWRAIICTFC 60

Query: 61 GSVLRSYR 69
          GSVLRSYR
Sbjct: 61 GSVLRSYR 68

[Close]

BLAST of Pay0017965 vs. ExPASy TrEMBL
Match: M5WWH0 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G233100 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 6.7e-28
Identity = 58/68 (85.29%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYCKSWRALICTFC 60
          MV FCF+VDQKR+VRRS+PA GICSRCGGGASVADMKTATRFC+VPFY KSWRA+ICTFC
Sbjct: 1  MVVFCFLVDQKRQVRRSKPAAGICSRCGGGASVADMKTATRFCYVPFYWKSWRAIICTFC 60

Query: 61 GSVLRSYR 69
          G++LRSYR
Sbjct: 61 GAILRSYR 68

[Close]

BLAST of Pay0017965 vs. NCBI nr
Match: XP_008448201.1 (PREDICTED: uncharacterized protein LOC103490465 [Cucumis melo])

HSP 1 Score: 146.7 bits (369), Expect = 7.1e-32
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYCKSWRALICTFC 60
          MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFY KSWRALICTFC
Sbjct: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC 60

Query: 61 GSVLRSYR 69
          GSVLRSYR
Sbjct: 61 GSVLRSYR 68

[Close]

BLAST of Pay0017965 vs. NCBI nr
Match: XP_004139958.2 (uncharacterized protein LOC101208066 [Cucumis sativus])

HSP 1 Score: 143.7 bits (361), Expect = 6.0e-31
Identity = 65/68 (95.59%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYCKSWRALICTFC 60
          MVFFCFMVDQKRKVRRSRPAPGIC+RCGGGASVADMKTA RFCHVPFY KSWRALICTFC
Sbjct: 20 MVFFCFMVDQKRKVRRSRPAPGICARCGGGASVADMKTAVRFCHVPFYWKSWRALICTFC 79

Query: 61 GSVLRSYR 69
          GSVLRSYR
Sbjct: 80 GSVLRSYR 87

[Close]

BLAST of Pay0017965 vs. NCBI nr
Match: XP_038902212.1 (uncharacterized protein LOC120088840 [Benincasa hispida])

HSP 1 Score: 143.7 bits (361), Expect = 6.0e-31
Identity = 66/68 (97.06%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYCKSWRALICTFC 60
          MV FCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFY KSWRALICTFC
Sbjct: 1  MVCFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC 60

Query: 61 GSVLRSYR 69
          GSVLRSYR
Sbjct: 61 GSVLRSYR 68

[Close]

BLAST of Pay0017965 vs. NCBI nr
Match: XP_022944461.1 (uncharacterized protein LOC111448908 [Cucurbita moschata] >XP_023511881.1 uncharacterized protein LOC111776763 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 141.0 bits (354), Expect = 3.9e-30
Identity = 63/68 (92.65%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYCKSWRALICTFC 60
          MV FCF+VDQKR++RRSRPAPGICSRCGGGASVADMKTATRFCHVPFY KSWRALICTFC
Sbjct: 1  MVCFCFLVDQKRRIRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC 60

Query: 61 GSVLRSYR 69
          GSVLRSYR
Sbjct: 61 GSVLRSYR 68

[Close]

BLAST of Pay0017965 vs. NCBI nr
Match: XP_022986417.1 (uncharacterized protein LOC111484159 [Cucurbita maxima])

HSP 1 Score: 139.4 bits (350), Expect = 1.1e-29
Identity = 62/68 (91.18%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYCKSWRALICTFC 60
          MV FCF+VDQKR+++RSRPAPGICSRCGGGASVADMKTATRFCHVPFY KSWRALICTFC
Sbjct: 1  MVCFCFLVDQKRRIQRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC 60

Query: 61 GSVLRSYR 69
          GSVLRSYR
Sbjct: 61 GSVLRSYR 68

[Close]

BLAST of Pay0017965 vs. TAIR 10
Match: AT3G15534.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52855.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 118.6 bits (296), Expect = 1.9e-27
Identity = 50/68 (73.53%), Postives = 60/68 (88.24%), Query Frame = 0


Query: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYCKSWRALICTFC 60
          MV FCF+VDQKRKV+ S+PA G CSRCG GA VADMKT+TRFC +P YC+SWRA++C+FC
Sbjct: 1  MVCFCFLVDQKRKVKGSKPAAGTCSRCGRGARVADMKTSTRFCLIPIYCRSWRAIVCSFC 60

Query: 61 GSVLRSYR 69
          GSVL+SYR
Sbjct: 61 GSVLKSYR 68

[Close]

BLAST of Pay0017965 vs. TAIR 10
Match: AT1G52855.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15534.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 113.2 bits (282), Expect = 8.1e-26
Identity = 48/68 (70.59%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYCKSWRALICTFC 60
          MV FCF+VDQ RKV+RS+PA G CSRCG  AS+ADMKT+TRFC +P Y +SWRA++C+FC
Sbjct: 1  MVCFCFLVDQTRKVKRSKPAAGTCSRCGHCASIADMKTSTRFCFIPIYWRSWRAVVCSFC 60

Query: 61 GSVLRSYR 69
          GSVL+SYR
Sbjct: 61 GSVLKSYR 68

[Close]

BLAST of Pay0017965 vs. TAIR 10
Match: AT2G20835.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15534.1); Has 66 Blast hits to 66 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 108.2 bits (269), Expect = 2.6e-24
Identity = 44/67 (65.67%), Postives = 57/67 (85.07%), Query Frame = 0


Query: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYCKSWRALICTFC 60
          M  FCF+VDQ++KVR  +PA G+CSRCGGGA VADM+T+TRFC VPFY K+W+A++C  C
Sbjct: 1  MAIFCFLVDQRKKVRGRKPAAGLCSRCGGGAVVADMRTSTRFCGVPFYRKAWKAIVCHIC 60

Query: 61 GSVLRSY 68
          G+VL+SY
Sbjct: 61 GAVLKSY 67

[Close]

BLAST of Pay0017965 vs. TAIR 10
Match: AT4G29905.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57123.1); Has 73 Blast hits to 73 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 40.4 bits (93), Expect = 6.6e-04
Identity = 19/52 (36.54%), Postives = 29/52 (55.77%), Query Frame = 0


Query: 9  DQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYCKSWRALICTFC 61
          ++K ++ R + APG+C  CGG  S  D++T   FC +P   K  R   C+ C
Sbjct: 9  EEKTELGRQQ-APGMCPYCGGKVSAVDIETKWLFCFLPLCFKVKRKYSCSSC 59

The following BLAST results are available for this feature:

BLAST of Pay0017965 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0017965 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BJR8	3.4e-32	98.53	uncharacterized protein LOC103490465 OS=Cucumis melo OX=3656 GN=LOC103490465 PE=...	[more]
A0A6J1FUH3	1.9e-30	92.65	uncharacterized protein LOC111448908 OS=Cucurbita moschata OX=3662 GN=LOC1114489...	[more]
A0A6J1J7G8	5.5e-30	91.18	uncharacterized protein LOC111484159 OS=Cucurbita maxima OX=3661 GN=LOC111484159...	[more]
A0A6J1CFS7	2.1e-29	89.71	uncharacterized protein LOC111011282 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
M5WWH0	6.7e-28	85.29	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G233100 PE=4 SV=1	[more]

BLAST of Pay0017965 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448201.1	7.1e-32	98.53	PREDICTED: uncharacterized protein LOC103490465 [Cucumis melo]	[more]
XP_004139958.2	6.0e-31	95.59	uncharacterized protein LOC101208066 [Cucumis sativus]	[more]
XP_038902212.1	6.0e-31	97.06	uncharacterized protein LOC120088840 [Benincasa hispida]	[more]
XP_022944461.1	3.9e-30	92.65	uncharacterized protein LOC111448908 [Cucurbita moschata] >XP_023511881.1 unchar...	[more]
XP_022986417.1	1.1e-29	91.18	uncharacterized protein LOC111484159 [Cucurbita maxima]	[more]

BLAST of Pay0017965 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15534.1	1.9e-27	73.53	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G52855.1	8.1e-26	70.59	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G20835.1	2.6e-24	65.67	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G29905.1	6.6e-04	36.54	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33320:SF2	OS07G0564200 PROTEIN	coord: 1..67
None	No IPR available	PANTHER	PTHR33320	METHIONYL-TRNA SYNTHETASE	coord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0017965.1	Pay0017965.1	mRNA