Pay0017940 (gene) Melon (Payzawat) v1

Overview


Name	Pay0017940
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Ribonuclease H
Location	chr11: 23625566 .. 23626609 (-)
RNA-Seq Expression	Pay0017940
Synteny	Pay0017940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTATGCAAAGAAGTGTGAAGCTTGTCAATACCATGCAAACTTCATACATCAGCCTCTAGAGCCTCTACATCCAACTGTGGCTTCTTGGCCGTTTGAGGCTTGGGGACTCAATCTGGTTGGTCTTATTACACCAAAATCATCAGCAGGACATTATTTCTCAAAATGGGCTGAGGTCATTCCCTTGAGAGAGGCCAAGAAGGAGAACGTGGCAAACTTTATTCGTACCCACATCATCTATCGATACGGTATTCCTCACCGGATTATGACAGATAATGGAAGACAATTCTCCAATAGCATGATAGTTAAATTATGTGGAAAATTCAAGTTCAAACAATACAAGTCATCTATGTACAACGCAGCTGCGAATGGTCTAGCAGAAGCATTCAATAAGACATTATGCAATCTTCTAAAGAAAATTGTCTCCAAGTCGAAGAGGGATTGGCAAGAAAGAATCGGTGAAGCATTGTGGGCTTATCGAACCACTCATCGCACTCCTACGGGGGTTACACCAAATTCTCTTGTTTATGGTGTAGAGGTTGTCCTTCCCCTTGAAAGAGAAATCCCATCATTAAGAATGGCAGTGCAAGAAGGGTTGACTAACGAAGACAATGTCAAGTTACGTCTTCAAGAGTTAGAAGCACTTGATGAAAAGCGATTAGAAGCTCAGCAAGCATTGGAATATTACCAAGCCCAAATGTCTAAAGCTTTTGACAAACATGTAAAGCCCCGATCATTTCAAGTTGGTGATTTAGTGCTTGCAGTAAGAAGATCTATCATCACGACAAGGCATACGGGAAATATGTTTACACCTAAATGGGACGGACCCTATATTGCCAAAGAAATCTACACAAATGGTGCATACAAGATTGTTGATCGAGATGGATTAAATATTGGCTCAATCAACAGCAAGTTTATCAAGAAATTGTATGCTTAACGTCATTATGTAAATAAAAAAATTGAACTACGTTATGACTTAATCCCTATATTATAAAGGGTACGTAGGCAGCTTAAAGGAAACTTTAAGTTCAGTCCAGTATAA

mRNA sequence

ATGGACTATGCAAAGAAGTGTGAAGCTTGTCAATACCATGCAAACTTCATACATCAGCCTCTAGAGCCTCTACATCCAACTGTGGCTTCTTGGCCGTTTGAGGCTTGGGGACTCAATCTGGTTGGTCTTATTACACCAAAATCATCAGCAGGACATTATTTCTCAAAATGGGCTGAGGTCATTCCCTTGAGAGAGGCCAAGAAGGAGAACGTGGCAAACTTTATTCCTGCGAATGGTCTAGCAGAAGCATTCAATAAGACATTATGCAATCTTCTAAAGAAAATTGTCTCCAAGTCGAAGAGGGATTGGCAAGAAAGAATCGGTGAAGCATTGTGGGCTTATCGAACCACTCATCGCACTCCTACGGGGGTTACACCAAATTCTCTTGTTTATGGTGTAGAGGTTGTCCTTCCCCTTGAAAGAGAAATCCCATCATTAAGAATGGCAGTGCAAGAAGGGTTGACTAACGAAGACAATGTCAAGTTACGTCTTCAAGAGTTAGAAGCACTTGATGAAAAGCGATTAGAAGCTCAGCAAGCATTGGAATATTACCAAGCCCAAATGTCTAAAGCTTTTGACAAACATGTAAAGCCCCGATCATTTCAAGTTGGTGATTTAGTGCTTGCAGTAAGAAGATCTATCATCACGACAAGGCATACGGGAAATATGGTACGTAGGCAGCTTAAAGGAAACTTTAAGTTCAGTCCAGTATAA

Coding sequence (CDS)

ATGGACTATGCAAAGAAGTGTGAAGCTTGTCAATACCATGCAAACTTCATACATCAGCCTCTAGAGCCTCTACATCCAACTGTGGCTTCTTGGCCGTTTGAGGCTTGGGGACTCAATCTGGTTGGTCTTATTACACCAAAATCATCAGCAGGACATTATTTCTCAAAATGGGCTGAGGTCATTCCCTTGAGAGAGGCCAAGAAGGAGAACGTGGCAAACTTTATTCCTGCGAATGGTCTAGCAGAAGCATTCAATAAGACATTATGCAATCTTCTAAAGAAAATTGTCTCCAAGTCGAAGAGGGATTGGCAAGAAAGAATCGGTGAAGCATTGTGGGCTTATCGAACCACTCATCGCACTCCTACGGGGGTTACACCAAATTCTCTTGTTTATGGTGTAGAGGTTGTCCTTCCCCTTGAAAGAGAAATCCCATCATTAAGAATGGCAGTGCAAGAAGGGTTGACTAACGAAGACAATGTCAAGTTACGTCTTCAAGAGTTAGAAGCACTTGATGAAAAGCGATTAGAAGCTCAGCAAGCATTGGAATATTACCAAGCCCAAATGTCTAAAGCTTTTGACAAACATGTAAAGCCCCGATCATTTCAAGTTGGTGATTTAGTGCTTGCAGTAAGAAGATCTATCATCACGACAAGGCATACGGGAAATATGGTACGTAGGCAGCTTAAAGGAAACTTTAAGTTCAGTCCAGTATAA

Protein sequence

MDYAKKCEACQYHANFIHQPLEPLHPTVASWPFEAWGLNLVGLITPKSSAGHYFSKWAEVIPLREAKKENVANFIPANGLAEAFNKTLCNLLKKIVSKSKRDWQERIGEALWAYRTTHRTPTGVTPNSLVYGVEVVLPLEREIPSLRMAVQEGLTNEDNVKLRLQELEALDEKRLEAQQALEYYQAQMSKAFDKHVKPRSFQVGDLVLAVRRSIITTRHTGNMVRRQLKGNFKFSPV

Homology

[Close]

BLAST of Pay0017940 vs. ExPASy TrEMBL
Match: A0A5A7T485 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold918G00010 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 2.9e-102
Identity = 202/276 (73.19%), Postives = 209/276 (75.72%), Query Frame = 0


Query: 1    MDYAKKCEACQYHANFIHQPLEPLHPTVASWPFEAWGLNLVGLITPKSSAGH-------- 60
            MDYAKKCEACQYHANFIHQPLEPLHPT+ASWPFEAWGL+LVG ITPKSSAGH        
Sbjct: 1523 MDYAKKCEACQYHANFIHQPLEPLHPTMASWPFEAWGLDLVGPITPKSSAGHFYILAATD 1582

Query: 61   YFSKWAEVIPLREAKKENVANFI------------------------------------- 120
            YFSKW E IPLREAKKENVANFI                                     
Sbjct: 1583 YFSKWTEAIPLREAKKENVANFIRTHIIYRYGIPHRIVTDNGRQFSNSMIDKLCEKFKFK 1642

Query: 121  ---------PANGLAEAFNKTLCNLLKKIVSKSKRDWQERIGEALWAYRTTHRTPTGVTP 180
                      ANGLAE F+KTLCNLLKKIV KSKRDWQERIGEALWAYRTTHRTPT VTP
Sbjct: 1643 QYKSSMYNAAANGLAEEFDKTLCNLLKKIVCKSKRDWQERIGEALWAYRTTHRTPTEVTP 1702

Query: 181  NSLVYGVEVVLPLEREIPSLRMAVQEGLTNEDNVKLRLQELEALDEKRLEAQQALEYYQA 223
             SLVYG++ VLPLEREIPSLRMAVQE LT EDNVKLRLQELEALDEKRLEAQQALE YQA
Sbjct: 1703 YSLVYGLDAVLPLEREIPSLRMAVQEELTIEDNVKLRLQELEALDEKRLEAQQALECYQA 1762

[Close]

BLAST of Pay0017940 vs. ExPASy TrEMBL
Match: A0A5D3BV77 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold968G00270 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 2.9e-102
Identity = 202/276 (73.19%), Postives = 209/276 (75.72%), Query Frame = 0


Query: 1    MDYAKKCEACQYHANFIHQPLEPLHPTVASWPFEAWGLNLVGLITPKSSAGH-------- 60
            MDYAKKCEACQYHANFIHQPLEPLHPT+ASWPFEAWGL+LVG ITPKSSAGH        
Sbjct: 1435 MDYAKKCEACQYHANFIHQPLEPLHPTMASWPFEAWGLDLVGPITPKSSAGHFYILAATD 1494

Query: 61   YFSKWAEVIPLREAKKENVANFI------------------------------------- 120
            YFSKW E IPLREAKKENVANFI                                     
Sbjct: 1495 YFSKWTEAIPLREAKKENVANFIRTHIIYRYGIPHRIVTDNGRQFSNSMIDKLCEKFKFK 1554

Query: 121  ---------PANGLAEAFNKTLCNLLKKIVSKSKRDWQERIGEALWAYRTTHRTPTGVTP 180
                      ANGLAE F+KTLCNLLKKIV KSKRDWQERIGEALWAYRTTHRTPT VTP
Sbjct: 1555 QYKSSMYNAAANGLAEEFDKTLCNLLKKIVCKSKRDWQERIGEALWAYRTTHRTPTEVTP 1614

Query: 181  NSLVYGVEVVLPLEREIPSLRMAVQEGLTNEDNVKLRLQELEALDEKRLEAQQALEYYQA 223
             SLVYG++ VLPLEREIPSLRMAVQE LT EDNVKLRLQELEALDEKRLEAQQALE YQA
Sbjct: 1615 YSLVYGLDAVLPLEREIPSLRMAVQEELTIEDNVKLRLQELEALDEKRLEAQQALECYQA 1674

[Close]

BLAST of Pay0017940 vs. ExPASy TrEMBL
Match: A0A5A7SZF5 (Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G00440 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 3.2e-101
Identity = 202/276 (73.19%), Postives = 208/276 (75.36%), Query Frame = 0


Query: 1   MDYAKKCEACQYHANFIHQPLEPLHPTVASWPFEAWGLNLVGLITPKSSAGH-------- 60
           MDYAKKCEACQYHANFIHQPLEPLHPTVASWPFEAWGL+LVG ITPKS AGH        
Sbjct: 112 MDYAKKCEACQYHANFIHQPLEPLHPTVASWPFEAWGLDLVGPITPKSLAGHSYILAATD 171

Query: 61  YFSKWAEVIPLREAKKENVANFI------------------------------------- 120
           YFSK AE IPLREAKKENVANFI                                     
Sbjct: 172 YFSKLAEAIPLREAKKENVANFIRTHIIYRYGIPHRIVTDNGRQFSSSMIDKLCENFKFK 231

Query: 121 ---------PANGLAEAFNKTLCNLLKKIVSKSKRDWQERIGEALWAYRTTHRTPTGVTP 180
                     AN LA+AFNKTLCNLLKKIVSKSKRDWQERIGEALWAYRTTHRTPTGVTP
Sbjct: 232 QSKSSMYNAAANDLAKAFNKTLCNLLKKIVSKSKRDWQERIGEALWAYRTTHRTPTGVTP 291

Query: 181 NSLVYGVEVVLPLEREIPSLRMAVQEGLTNEDNVKLRLQELEALDEKRLEAQQALEYYQA 223
            SLVYGVE +LPLEREIPSLRMAVQEGLT EDNVKL LQELEALD+KRLEAQQALE YQA
Sbjct: 292 YSLVYGVEAILPLEREIPSLRMAVQEGLTTEDNVKLHLQELEALDKKRLEAQQALECYQA 351

[Close]

BLAST of Pay0017940 vs. ExPASy TrEMBL
Match: A0A5A7SPV8 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9G00010 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 4.6e-100
Identity = 201/276 (72.83%), Postives = 204/276 (73.91%), Query Frame = 0


Query: 1    MDYAKKCEACQYHANFIHQPLEPLHPTVASWPFEAWGLNLVGLITPKSSAGH-------- 60
            MDYAKKCEACQYHANFIHQP EPLHP+VASW FEAWGL+LVG ITPKSSAGH        
Sbjct: 1011 MDYAKKCEACQYHANFIHQPQEPLHPSVASWLFEAWGLDLVGPITPKSSAGHSYILAATN 1070

Query: 61   YFSKWAEVIPLREAKKENVANFI------------------------------------- 120
            YFSKWAE IPLREAKKENV NFI                                     
Sbjct: 1071 YFSKWAEAIPLREAKKENVTNFIRTHIIYRYGIPHRIVTDNGRQFSNSMIDKLCEKFKFR 1130

Query: 121  ---------PANGLAEAFNKTLCNLLKKIVSKSKRDWQERIGEALWAYRTTHRTPTGVTP 180
                      ANGLAEAFNKTLCNLLKKIVSKSKRDWQERI EALWAYRTTHRT T VTP
Sbjct: 1131 QYKSSMYNAAANGLAEAFNKTLCNLLKKIVSKSKRDWQERISEALWAYRTTHRTSTRVTP 1190

Query: 181  NSLVYGVEVVLPLEREIPSLRMAVQEGLTNEDNVKLRLQELEALDEKRLEAQQALEYYQA 223
             SLVYGVEV LPLEREIPSLRM VQEGLT EDNVKLRLQELE LDEKRLEAQQ LE YQA
Sbjct: 1191 YSLVYGVEVFLPLEREIPSLRMTVQEGLTTEDNVKLRLQELEELDEKRLEAQQELECYQA 1250

[Close]

BLAST of Pay0017940 vs. ExPASy TrEMBL
Match: A0A5D3D1E5 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G004020 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 1.0e-99
Identity = 192/276 (69.57%), Postives = 208/276 (75.36%), Query Frame = 0


Query: 1    MDYAKKCEACQYHANFIHQPLEPLHPTVASWPFEAWGLNLVGLITPKSSAGH-------- 60
            M +AK CEACQ+HANFIHQP EPLHPT+ASWPFEAWGL+LVG ITPKS+AGH        
Sbjct: 1999 MHFAKHCEACQFHANFIHQPPEPLHPTIASWPFEAWGLDLVGPITPKSTAGHSYILAGTD 2058

Query: 61   YFSKWAEVIPLREAKKENVANFI------------------------------------- 120
            YFSKWAE +PLREAKKEN+ NF+                                     
Sbjct: 2059 YFSKWAEAVPLREAKKENIVNFVQTHIIYRYGIPHRIVTDNGRQFANTLMDKLCEKFNFK 2118

Query: 121  ---------PANGLAEAFNKTLCNLLKKIVSKSKRDWQERIGEALWAYRTTHRTPTGVTP 180
                      ANGLAEAFNKTLC+LLKK+VSK+KRDWQE+IGEALWAYRTTHRTPTGVTP
Sbjct: 2119 QFKSSMYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTP 2178

Query: 181  NSLVYGVEVVLPLEREIPSLRMAVQEGLTNEDNVKLRLQELEALDEKRLEAQQALEYYQA 223
             SLVYGVE VLPLEREIPSLRMA+QEGLT EDN +LRLQELEALDEKRLEAQQALE YQA
Sbjct: 2179 YSLVYGVEAVLPLEREIPSLRMAIQEGLTTEDNARLRLQELEALDEKRLEAQQALECYQA 2238

[Close]

BLAST of Pay0017940 vs. NCBI nr
Match: XP_031739134.1 (uncharacterized protein LOC116402863 [Cucumis sativus])

HSP 1 Score: 386.0 bits (990), Expect = 2.4e-103
Identity = 205/276 (74.28%), Postives = 210/276 (76.09%), Query Frame = 0


Query: 1    MDYAKKCEACQYHANFIHQPLEPLHPTVASWPFEAWGLNLVGLITPKSSAGH-------- 60
            +DY KKCE CQYHANFIHQP EPLHPTVASWPFEAWGL+LVG ITPKSSAGH        
Sbjct: 2112 IDYVKKCEPCQYHANFIHQPPEPLHPTVASWPFEAWGLDLVGPITPKSSAGHSYILAATD 2171

Query: 61   YFSKWAEVIPLREAKKENVANFI------------------------------------- 120
            YFSKWAE I LREAKKENVA+FI                                     
Sbjct: 2172 YFSKWAEAISLREAKKENVADFIRTHIIYRYGIPHRIVTDNGKQFSNSMMDKLCEKFKFK 2231

Query: 121  ---------PANGLAEAFNKTLCNLLKKIVSKSKRDWQERIGEALWAYRTTHRTPTGVTP 180
                      ANGLAEAFNKTLCNLLKKIVSKSKRDWQE+IGEALWAYRTTHRTPTGVTP
Sbjct: 2232 QYKSSMYNAAANGLAEAFNKTLCNLLKKIVSKSKRDWQEKIGEALWAYRTTHRTPTGVTP 2291

Query: 181  NSLVYGVEVVLPLEREIPSLRMAVQEGLTNEDNVKLRLQELEALDEKRLEAQQALEYYQA 223
             SLVYGVE VLPLEREIPSLRMAVQEGLT EDNVKLRLQELEALDEKRLEAQQALE YQA
Sbjct: 2292 YSLVYGVEAVLPLEREIPSLRMAVQEGLTTEDNVKLRLQELEALDEKRLEAQQALECYQA 2351

[Close]

BLAST of Pay0017940 vs. NCBI nr
Match: XP_031740568.1 (uncharacterized protein LOC116403508 [Cucumis sativus])

HSP 1 Score: 386.0 bits (990), Expect = 2.4e-103
Identity = 205/276 (74.28%), Postives = 210/276 (76.09%), Query Frame = 0


Query: 1    MDYAKKCEACQYHANFIHQPLEPLHPTVASWPFEAWGLNLVGLITPKSSAGH-------- 60
            +DY KKCE CQYHANFIHQP EPLHPTVASWPFEAWGL+LVG ITPKSSAGH        
Sbjct: 2112 IDYVKKCEPCQYHANFIHQPPEPLHPTVASWPFEAWGLDLVGPITPKSSAGHSYILAATD 2171

Query: 61   YFSKWAEVIPLREAKKENVANFI------------------------------------- 120
            YFSKWAE I LREAKKENVA+FI                                     
Sbjct: 2172 YFSKWAEAISLREAKKENVADFIRTHIIYRYGIPHRIVTDNGKQFSNSMMDKLCEKFKFK 2231

Query: 121  ---------PANGLAEAFNKTLCNLLKKIVSKSKRDWQERIGEALWAYRTTHRTPTGVTP 180
                      ANGLAEAFNKTLCNLLKKIVSKSKRDWQE+IGEALWAYRTTHRTPTGVTP
Sbjct: 2232 QYKSSMYNAAANGLAEAFNKTLCNLLKKIVSKSKRDWQEKIGEALWAYRTTHRTPTGVTP 2291

Query: 181  NSLVYGVEVVLPLEREIPSLRMAVQEGLTNEDNVKLRLQELEALDEKRLEAQQALEYYQA 223
             SLVYGVE VLPLEREIPSLRMAVQEGLT EDNVKLRLQELEALDEKRLEAQQALE YQA
Sbjct: 2292 YSLVYGVEAVLPLEREIPSLRMAVQEGLTTEDNVKLRLQELEALDEKRLEAQQALECYQA 2351

[Close]

BLAST of Pay0017940 vs. NCBI nr
Match: XP_031742032.1 (uncharacterized protein LOC116404025 [Cucumis sativus])

HSP 1 Score: 384.8 bits (987), Expect = 5.4e-103
Identity = 204/276 (73.91%), Postives = 210/276 (76.09%), Query Frame = 0


Query: 1    MDYAKKCEACQYHANFIHQPLEPLHPTVASWPFEAWGLNLVGLITPKSSAGH-------- 60
            +DY KKCE CQYHANFIHQP EPLHPTVASWPFEAWGL+LVG ITPKSSAGH        
Sbjct: 2112 IDYVKKCEPCQYHANFIHQPPEPLHPTVASWPFEAWGLDLVGPITPKSSAGHSYILAATD 2171

Query: 61   YFSKWAEVIPLREAKKENVANFI------------------------------------- 120
            YFS+WAE I LREAKKENVA+FI                                     
Sbjct: 2172 YFSRWAEAISLREAKKENVADFIRTHIIYRYGIPHRIVTDNGKQFSNSMMDKLCEKFKFK 2231

Query: 121  ---------PANGLAEAFNKTLCNLLKKIVSKSKRDWQERIGEALWAYRTTHRTPTGVTP 180
                      ANGLAEAFNKTLCNLLKKIVSKSKRDWQE+IGEALWAYRTTHRTPTGVTP
Sbjct: 2232 QYKSSMYNAAANGLAEAFNKTLCNLLKKIVSKSKRDWQEKIGEALWAYRTTHRTPTGVTP 2291

Query: 181  NSLVYGVEVVLPLEREIPSLRMAVQEGLTNEDNVKLRLQELEALDEKRLEAQQALEYYQA 223
             SLVYGVE VLPLEREIPSLRMAVQEGLT EDNVKLRLQELEALDEKRLEAQQALE YQA
Sbjct: 2292 YSLVYGVEAVLPLEREIPSLRMAVQEGLTTEDNVKLRLQELEALDEKRLEAQQALECYQA 2351

[Close]

BLAST of Pay0017940 vs. NCBI nr
Match: XP_031737372.1 (uncharacterized protein LOC116402244 [Cucumis sativus])

HSP 1 Score: 384.8 bits (987), Expect = 5.4e-103
Identity = 204/276 (73.91%), Postives = 210/276 (76.09%), Query Frame = 0


Query: 1    MDYAKKCEACQYHANFIHQPLEPLHPTVASWPFEAWGLNLVGLITPKSSAGH-------- 60
            +DY KKCE CQYHANFIHQP EPLHPTVASWPFEAWGL+LVG ITPKSSAGH        
Sbjct: 1487 IDYVKKCEPCQYHANFIHQPPEPLHPTVASWPFEAWGLDLVGPITPKSSAGHSYILAATD 1546

Query: 61   YFSKWAEVIPLREAKKENVANFI------------------------------------- 120
            YFS+WAE I LREAKKENVA+FI                                     
Sbjct: 1547 YFSRWAEAISLREAKKENVADFIRTHIIYRYGIPHRIVTDNGKQFSNSMMDKLCEKFKFK 1606

Query: 121  ---------PANGLAEAFNKTLCNLLKKIVSKSKRDWQERIGEALWAYRTTHRTPTGVTP 180
                      ANGLAEAFNKTLCNLLKKIVSKSKRDWQE+IGEALWAYRTTHRTPTGVTP
Sbjct: 1607 QYKSSMYNAAANGLAEAFNKTLCNLLKKIVSKSKRDWQEKIGEALWAYRTTHRTPTGVTP 1666

Query: 181  NSLVYGVEVVLPLEREIPSLRMAVQEGLTNEDNVKLRLQELEALDEKRLEAQQALEYYQA 223
             SLVYGVE VLPLEREIPSLRMAVQEGLT EDNVKLRLQELEALDEKRLEAQQALE YQA
Sbjct: 1667 YSLVYGVEAVLPLEREIPSLRMAVQEGLTTEDNVKLRLQELEALDEKRLEAQQALECYQA 1726

[Close]

BLAST of Pay0017940 vs. NCBI nr
Match: XP_031742199.1 (uncharacterized protein LOC105435721 [Cucumis sativus])

HSP 1 Score: 384.8 bits (987), Expect = 5.4e-103
Identity = 204/276 (73.91%), Postives = 210/276 (76.09%), Query Frame = 0


Query: 1    MDYAKKCEACQYHANFIHQPLEPLHPTVASWPFEAWGLNLVGLITPKSSAGH-------- 60
            +DY KKCE CQYHANFIHQP EPLHPTVASWPFEAWGL+LVG ITPKSSAGH        
Sbjct: 1971 IDYVKKCEPCQYHANFIHQPPEPLHPTVASWPFEAWGLDLVGPITPKSSAGHSYILAATD 2030

Query: 61   YFSKWAEVIPLREAKKENVANFI------------------------------------- 120
            YFS+WAE I LREAKKENVA+FI                                     
Sbjct: 2031 YFSRWAEAISLREAKKENVADFIRTHIIYRYGIPHRIVTDNGKQFSNSMMDKLCEKFKFK 2090

Query: 121  ---------PANGLAEAFNKTLCNLLKKIVSKSKRDWQERIGEALWAYRTTHRTPTGVTP 180
                      ANGLAEAFNKTLCNLLKKIVSKSKRDWQE+IGEALWAYRTTHRTPTGVTP
Sbjct: 2091 QYKSSMYNAAANGLAEAFNKTLCNLLKKIVSKSKRDWQEKIGEALWAYRTTHRTPTGVTP 2150

Query: 181  NSLVYGVEVVLPLEREIPSLRMAVQEGLTNEDNVKLRLQELEALDEKRLEAQQALEYYQA 223
             SLVYGVE VLPLEREIPSLRMAVQEGLT EDNVKLRLQELEALDEKRLEAQQALE YQA
Sbjct: 2151 YSLVYGVEAVLPLEREIPSLRMAVQEGLTTEDNVKLRLQELEALDEKRLEAQQALECYQA 2210

The following BLAST results are available for this feature:

BLAST of Pay0017940 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0017940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T485	2.9e-102	73.19	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold91...	[more]
A0A5D3BV77	2.9e-102	73.19	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96...	[more]
A0A5A7SZF5	3.2e-101	73.19	Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7SPV8	4.6e-100	72.83	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9G00010 P...	[more]
A0A5D3D1E5	1.0e-99	69.57	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00402...	[more]

BLAST of Pay0017940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031739134.1	2.4e-103	74.28	uncharacterized protein LOC116402863 [Cucumis sativus]	[more]
XP_031740568.1	2.4e-103	74.28	uncharacterized protein LOC116403508 [Cucumis sativus]	[more]
XP_031742032.1	5.4e-103	73.91	uncharacterized protein LOC116404025 [Cucumis sativus]	[more]
XP_031737372.1	5.4e-103	73.91	uncharacterized protein LOC116402244 [Cucumis sativus]	[more]
XP_031742199.1	5.4e-103	73.91	uncharacterized protein LOC105435721 [Cucumis sativus]	[more]

BLAST of Pay0017940 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 167..187
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 78..218
None	No IPR available	PANTHER	PTHR24559:SF342	SUBFAMILY NOT NAMED	coord: 78..218
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 76..180 e-value: 1.0E-16 score: 62.8
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 30..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0017940.1	Pay0017940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity