Pay0017887 (gene) Melon (Payzawat) v1

Overview


Name	Pay0017887
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	zinc finger HIT domain-containing protein 3
Location	chr03: 23548703 .. 23552654 (-)
RNA-Seq Expression	Pay0017887
Synteny	Pay0017887

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGATTTTATCCTCAAACTTCCTTTCCCCTCGAAATCACTCCCTCGGGCTCAACTCCCTCACGCGCTCGTGCGTCATTGCTCTGCCCTTGTCGATGATATCGCCCCATGTCTGCCATCGTCCTCTAAGCCTAGGTAAGCACAGACGGACCTCTCCATCTCCCTCTTTTTAAGTGCGAGATTCCCTCACCCGCCGTTCACCCTCAATCTCTGAACTTGATCGCCGACGCAGCCCAGTCGTGACTGCCGTGCCCACGTCCTAAAACGTTTTTGCGACGAGCAGCTTAGGTAACACTGGTCTTTCGTGTTTCTATTGTTCGTTCTTATTACCCAAGACCTATGTGGTTTCTATTTGGGTTTCTCACTTTGTCTTTGTTTTGGAATCAAGAGTTCGAATGTGCTTAGCGCTCCGTCCAGCAAGATTAAGGACGTTAGCCGGGCATTCGTGTTAGTTTGGAACCCATTCAAACACGACCAACAGGTAATTAAGCTTTTTTGGCATTAATCAGCGGGTAAGGATTTGTTTTCATGACTTTCAAACTCGTTTAAGTTCGGTTAGTTATTCCTGGATTCTTAACCTTCTGAGCAAAAATTAAACTCCTTTATTGATGATAGAAGCTTGAAATTGTCATCACTTCAAACTTAATGGTTCTAATCTCAATGCTTTTTTGTTCGCAGCATTTAGGATTAAGAAATTCATCATTCTATGGCTCCTCGGGAATGTCAGGTCTGCAATGAAGCACCATCCAAATACAAATGCCCCCTATGCCTTGCACCTTAGTAAGAAAAACTAGAAGATTTGTTTTAGGTTGTTTTTGCGTAGTCTTTAATGAAAAGTCTCTGACCTTCATTCATTTGTGTGCTGGCCTCTCCCTCTCACTTTGCTTGAAGCTGCTCTCTGGTTTGTTTTAAGAAACACAAAGGTGCTGTTCTTTTGGACTTGGGTTTTTATTATTGTATTTATGTTCTATAAATTTGTATGAAGTTTCAGGTTCAGACGGTCTACTCTTCTAGTTGGCTATTTATTTTGGGATAATTTCATGATGTGGTGAAATCGCTAGTTGTCTAAATCGTTGCTACTTGTGCTTTGTTATGAATTTGAACTCACTGCCCAAGTTTAAAGCAGATCATTGTTCTAAGTTCCCTTGCCTGTATTTTTACCTACTTTGACGGATTAGTTGATGCTAACTGGAGGTTCTGGTATCTGTTTAAGATTTGAATGTACTGGTCATGTTTTTTCAAGTTGAGTTACTCTTGAATGTCTGCTCCAATAAGTGGTTCATAGAGTGTTCTTTCACGTTATACATTGGAAGACCTCCAAATTTTAGACTAAGGAAATTTATTAATGTATTTATTGCGAGCTAGACTCTTGGATGCTTATCATATTTGATGTGCAGAAGTTTAATGTAACCTTGGGCATGAATTGGTTAGTTGCTAACCAAACCACCATCGATTGTGTCAAGAAAGAAGCCCCGTGCGGACCCTAAATTAAGTTCAAAGGTGCAAAGCATGGAAATCCAAATGTTGTGAACAATAGTGTAGCATGGGGCTTTTGGTGTATTTGTCAAATATTGTGAACATTTGATGTTTCTTGATCATGTTTCATAACCAAAAGAGTAATTTTGAGTCTTGAATGTTCTTCTTCGATGGTAAAAGTCCATTCTTGATGATTCTTGACGATTCTTTAATTCATCCAACTCCCACTCTTTACGTCGATTTCTTGAAAAATGGGTTTGATTGTGGATTGTTTGGGCCAATTTTTGATATCGTTGCCTTCTTATTCTGTTCCAAACAGCCTTAGAGAAATCATCGGAGTCACTAGAATCAGTAGAATCAAACTTCCAATGTGGATAATGATAGGTTCTTTGAGAAAATCGAGCATGGCCAAAATTAGAATGTTGAAATTCTTCTTTGGTGAAGTGAGACTCAAAAAGTTTTAATCCATACTTCAGGCAGTTTCCTTTAAATAGTAATTTCTGTTTGGTTTTAATGACCTTGGTATCGTAATTGAGTTTAAATATTAAAAAAAAGTTATTGACATTCTCTAATTTAGTCTGAAATTTGGGGGCGTTTCACATGCTATCTGTGATTGGCATTCAATTCTATTGCTATGATAACTTATATCGTTTGCAACTTGTGCAGAAGTGCTCTGTGCCATCAAGCCTGTGTCTGAAGAGGACCAATCAAGTAAGTCTATACTAACGTTTCATTTATTCAAATATGTCATGTATATACTCACGTTTCACTTATTCAAATATGTCATACATGTCAAGATTGCCCAATAATTGTTTATTTGATTCCTTCCAGATTTTATCCTTTTGGATCCTGTGAAAGTCAATGAACTTTCTTTCCTTGTTCATTCTTTGGGTATTCATCGTACTCGCTGACCCATTTTTATTCTTTCCATCTAAAGCTGCTCCCAATGGATCATTTGTAGATAGGCCAATATGTGTTGGAGACCAGAATGAAGTACTTGAAAAGTCGCAGTTAGAGGCTATTGGTATTGACTCATATTTACTGATTTTATTAACTCAATTTATACATGATCACGTTTGGTCCCAAAAAACACATGACATGCATTTCTAATTCTTACAAGAGAGTTGGATGAATTTCGAGGGTTATGGGAGACAGAAATCTTCAAATCTCATGGTTGCAAAATGTTCACTTGATTAGGTCATATGAAAAATCTAGTATATAACAACCTTCTCTCAGTCATTTGTTTGGTTAACCTTCTGACGCTTTGGATAGCAAAGTATCATTTGAGAAGGGATTAAGTTTTGAAGGTTGGACGGACAATTTGTATGTCAAGGAGAAACTAGGGAGGGAAACTATGTTTTATCACATTTTTATTTACGCTTCAAGAATAATTTTGTTGCTAGTTGTAAAAGCATTATTGAACTTACATTCTAGGTTTCTGCGCATCTTTCTTACAGCTTCTTCCTCAGAAATACACAATATTTTGAATGATGAGAAACTCCGGAAGTTTATCCTTGCCATTGATAGCTCACTCGATCCAGAAACTGTAAGTATTTTGCATCTTCCATCACGTGAGGAATTGTACTCCTAACCAACTTCTTGCTCCATTATAGTCATCATCTACAAATCGTTGTAAATGTGAATATAAATAGTTAAAAACGTTGGTTTAAGTTGGTTCTTGTTCTTATTAGGAACTTGATAAAGCTATGGAAGATGAAGCATTTCGCATTTTCAGTAGCAAGGTACTATTTTTAATATTTTTGATCATCTGTGACTTGTGATACAGTCGTCATGAGCATGCCGGATAAATATTTTCGTTTGTTTTAAAGCGTTTATTCTCTCTGTTGGTTAGATATCATCCATCATCAGCTCTTAGACCTAATAGTCATAGATGGAGGAGGGAAAGAAACAGTTTACCAAGACATGTATATGTATAAACAACGAGACGTTTCTGCCCTTTTGGCATAAGGGATCAACTCAGCAGATGATGATGATTTCAGCAAAGAACGACGGCTTCATGGATTGTAGTAATGCTGGGGGGCCATCTAAGTGATCAGCTGCTAATGTTTAATGGTGATCAAATGTACCAAGTTATACTGATCAGTTTTCAAGTACTATAGGAACATGTCCGTTTGACGACCACCCAAACTCATGTTTAGTGATTTCTTGGCTGAAGAGAATGTTGCAAGTCATGTTTTGACTAAAGGACTTGCGATTGAATTAACCAACTGAAAGTTGAAGGTTTTATGATTTTTATATCATAAAATTAGCATAGGTTTTATCATGATGAATCAGACTAAATTCCAACTGGGAAAAAAAAGTGGTCTTTCATGATCAGGCTACCAACCAACCAACCTAATGGAAGGTTGAGAATTAAAGAATTTGGGAAATAGAATGTACTAAAGAATCAGTATTACTATTTACATTAAATGGAGAGGGGAAAAAAACAAAACAACGAAATAAATATGCAGATTTAG

mRNA sequence

AAAGATTTTATCCTCAAACTTCCTTTCCCCTCGAAATCACTCCCTCGGGCTCAACTCCCTCACGCGCTCGTGCGTCATTGCTCTGCCCTTGTCGATGATATCGCCCCATGTCTGCCATCGTCCTCTAAGCCTAGGTAAGCACAGACGGACCTCTCCATCTCCCTCTTTTTAAGTGCGAGATTCCCTCACCCGCCGTTCACCCTCAATCTCTGAACTTGATCGCCGACGCAGCCCAGTCGTGACTGCCGTGCCCACGTCCTAAAACGTTTTTGCGACGAGCAGCTTAGAGTTCGAATGTGCTTAGCGCTCCGTCCAGCAAGATTAAGGACGTTAGCCGGGCATTCGTGTTAGTTTGGAACCCATTCAAACACGACCAACAGGTAATTAAGCTTTTTTGGCATTAATCAGCGGCATTTAGGATTAAGAAATTCATCATTCTATGGCTCCTCGGGAATGTCAGGTCTGCAATGAAGCACCATCCAAATACAAATGCCCCCTATGCCTTGCACCTTACTGCTCTCTGGTTTGTTTTAAGAAACACAAAGAAGTGCTCTGTGCCATCAAGCCTGTGTCTGAAGAGGACCAATCAACTGCTCCCAATGGATCATTTGTAGATAGGCCAATATGTGTTGGAGACCAGAATGAAGTACTTGAAAAGTCGCAGTTAGAGGCTATTGCTTCTTCCTCAGAAATACACAATATTTTGAATGATGAGAAACTCCGGAAGTTTATCCTTGCCATTGATAGCTCACTCGATCCAGAAACTGAACTTGATAAAGCTATGGAAGATGAAGCATTTCGCATTTTCAGTAGCAAGATATCATCCATCATCAGCTCTTAGACCTAATAGTCATAGATGGAGGAGGGAAAGAAACAGTTTACCAAGACATGTATATGTATAAACAACGAGACGTTTCTGCCCTTTTGGCATAAGGGATCAACTCAGCAGATGATGATGATTTCAGCAAAGAACGACGGCTTCATGGATTGTAGTAATGCTGGGGGGCCATCTAAGTGATCAGCTGCTAATGTTTAATGGTGATCAAATGTACCAAGTTATACTGATCAGTTTTCAAGTACTATAGGAACATGTCCGTTTGACGACCACCCAAACTCATGTTTAGTGATTTCTTGGCTGAAGAGAATGTTGCAAGTCATGTTTTGACTAAAGGACTTGCGATTGAATTAACCAACTGAAAGTTGAAGGTTTTATGATTTTTATATCATAAAATTAGCATAGGTTTTATCATGATGAATCAGACTAAATTCCAACTGGGAAAAAAAAGTGGTCTTTCATGATCAGGCTACCAACCAACCAACCTAATGGAAGGTTGAGAATTAAAGAATTTGGGAAATAGAATGTACTAAAGAATCAGTATTACTATTTACATTAAATGGAGAGGGGAAAAAAACAAAACAACGAAATAAATATGCAGATTTAG

Coding sequence (CDS)

ATGGCTCCTCGGGAATGTCAGGTCTGCAATGAAGCACCATCCAAATACAAATGCCCCCTATGCCTTGCACCTTACTGCTCTCTGGTTTGTTTTAAGAAACACAAAGAAGTGCTCTGTGCCATCAAGCCTGTGTCTGAAGAGGACCAATCAACTGCTCCCAATGGATCATTTGTAGATAGGCCAATATGTGTTGGAGACCAGAATGAAGTACTTGAAAAGTCGCAGTTAGAGGCTATTGCTTCTTCCTCAGAAATACACAATATTTTGAATGATGAGAAACTCCGGAAGTTTATCCTTGCCATTGATAGCTCACTCGATCCAGAAACTGAACTTGATAAAGCTATGGAAGATGAAGCATTTCGCATTTTCAGTAGCAAGATATCATCCATCATCAGCTCTTAG

Protein sequence

MAPRECQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVLCAIKPVSEEDQSTAPNGSFVDRPICVGDQNEVLEKSQLEAIASSSEIHNILNDEKLRKFILAIDSSLDPETELDKAMEDEAFRIFSSKISSIISS

Homology

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BLAST of Pay0017887 vs. ExPASy Swiss-Prot
Match: Q15649 (Zinc finger HIT domain-containing protein 3 OS=Homo sapiens OX=9606 GN=ZNHIT3 PE=1 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 1.6e-06
Identity = 37/138 (26.81%), Postives = 66/138 (47.83%), Query Frame = 0


Query: 6   CQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVL-CAIKPVSEEDQSTAPNGSF-----VD 65
           C +C E P KY+CP C  PYCS+VCF+KHKE      +PV ++ +S  P  +       D
Sbjct: 11  CVICLEKP-KYRCPACRVPYCSVVCFRKHKEQCNPETRPVEKKIRSALPTKTVKPVENKD 70

Query: 66  RPICVGD------QNEVLEKSQLEAIASSSEIHNILNDEKLRKFILAIDSSLDPETELDK 125
               + D      + + +    L+ +  S+ + ++L +  LR+ ++ +D   D    +  
Sbjct: 71  DDDSIADFLNSDEEEDRVSLQNLKNLGESATLRSLLLNPHLRQLMVNLDQGEDKAKLMRA 130

Query: 126 AMEDEAFRIFSSKISSII 132
            M++  F  F+     I+
Sbjct: 131 YMQEPLFVEFADCCLGIV 147

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BLAST of Pay0017887 vs. ExPASy Swiss-Prot
Match: Q6UIM1 (Zinc finger HIT domain-containing protein 3 (Fragment) OS=Macaca mulatta OX=9544 GN=ZNHIT3 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.6e-06
Identity = 36/138 (26.09%), Postives = 65/138 (47.10%), Query Frame = 0


Query: 6   CQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVL-CAIKPVSEEDQSTAPNGSF-----VD 65
           C +C E P KY+CP C  PYCS+ CF+KHKE      +PV ++ +S  P  +       D
Sbjct: 3   CVICLEKP-KYRCPACRVPYCSVACFRKHKEQCNPEARPVEKKIRSALPTKTXKPVENKD 62

Query: 66  RPICVGD------QNEVLEKSQLEAIASSSEIHNILNDEKLRKFILAIDSSLDPETELDK 125
               + D      + + +    L+ +  S+ + ++L +  LR+ ++ +D   D    +  
Sbjct: 63  DDDSIADFLNSDEEEDRVSLQNLKNLGKSATLRSLLLNPHLRQLMVNLDQGEDKAKLMRA 122

Query: 126 AMEDEAFRIFSSKISSII 132
            M++  F  F+     I+
Sbjct: 123 YMQEPLFVEFADCCLGIV 139

[Close]

BLAST of Pay0017887 vs. ExPASy Swiss-Prot
Match: Q9CQK1 (Zinc finger HIT domain-containing protein 3 OS=Mus musculus OX=10090 GN=Znhit3 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.6e-06
Identity = 34/134 (25.37%), Postives = 65/134 (48.51%), Query Frame = 0


Query: 6   CQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVLCA-IKPVSE-------EDQSTAPNGSF 65
           C VC E P KY+CP C  PYCS+ CF+KHKE   +  +PV +         + +  + S 
Sbjct: 11  CVVCLEKP-KYRCPTCRVPYCSVPCFQKHKEQCSSEARPVEKRRAGPPVRSEESKDDDSS 70

Query: 66  VDRPICVGDQNEVLEKSQLEAIASSSEIHNILNDEKLRKFILAIDSSLDPETELDKAMED 125
           V   +   ++ + +    L+ +  S  + ++L +  LR+ ++++D   +    +   M++
Sbjct: 71  VADFLNSDEEEDRVSLQNLKNLGESETLRSLLLNPHLRQLMISLDQGDNKAKLMRACMQE 130

Query: 126 EAFRIFSSKISSII 132
             F  F+     I+
Sbjct: 131 PLFVEFADCCLGIV 143

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BLAST of Pay0017887 vs. ExPASy Swiss-Prot
Match: O36031 (Uncharacterized zinc-finger protein C4F10.19c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC4F10.19c PE=4 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 7.9e-06
Identity = 36/115 (31.30%), Postives = 51/115 (44.35%), Query Frame = 0


Query: 6   CQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEV--------LCAIKPVSE--EDQSTAPNG 65
           C +CNE+  KYKCP C  PYCSL C+K H+              K V E       +PN 
Sbjct: 4   CSICNESEIKYKCPKCSFPYCSLPCWKIHQSQCETVNDNNTTTFKGVKEPLNPPEPSPNV 63

Query: 66  SFVDRPICVGDQNEVLEKSQLEAIASSSEIHNILNDEKLRKFILAIDSSLDPETE 111
            +V+  I    +  +  +S LE+I     I N++        I+    +LD E E
Sbjct: 64  IYVNGRIPSLAEEALPSESLLESIVEDPSIKNLIESNAELLHIMKELVNLDREEE 118

[Close]

BLAST of Pay0017887 vs. ExPASy Swiss-Prot
Match: Q6UIM2 (Zinc finger HIT domain-containing protein 3 (Fragment) OS=Pan troglodytes OX=9598 GN=ZNHIT3 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.0e-04
Identity = 32/129 (24.81%), Postives = 60/129 (46.51%), Query Frame = 0


Query: 15  KYKCPLCLAPYCSLVCFKKHKEVL-CAIKPVSEEDQSTAPNGSF-----VDRPICVGD-- 74
           KY+CP C  PYCS+ CF+KHKE      +PV ++ +S  P  +       D    + D  
Sbjct: 5   KYRCPACRVPYCSVACFRKHKEQCNPETRPVEKKIRSALPTKTVKPVENKDDDDSIADFL 64

Query: 75  ----QNEVLEKSQLEAIASSSEIHNILNDEKLRKFILAIDSSLDPETELDKAMEDEAFRI 132
               + + +    L+ +  S+ + ++L +  LR+ ++ +D   D    +   M++  F  
Sbjct: 65  NSDEEEDRVSLQNLKNLGESATLRSLLLNPHLRQLMVNLDQGEDKAKLMRAYMQEPLFVE 124

[Close]

BLAST of Pay0017887 vs. ExPASy TrEMBL
Match: A0A1S3CM88 (zinc finger HIT domain-containing protein 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502587 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 8.4e-67
Identity = 132/133 (99.25%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 1   MAPRECQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVLCAIKPVSEEDQSTAPNGSFVDR 60
           MAPRECQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEV CAIKPVSEEDQSTAPNGSFVDR
Sbjct: 1   MAPRECQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPCAIKPVSEEDQSTAPNGSFVDR 60

Query: 61  PICVGDQNEVLEKSQLEAIASSSEIHNILNDEKLRKFILAIDSSLDPETELDKAMEDEAF 120
           PICVGDQNEVLEKSQLEAIASSSEIHNILNDEKLRKFILAIDSSLDPETELDKAMEDEAF
Sbjct: 61  PICVGDQNEVLEKSQLEAIASSSEIHNILNDEKLRKFILAIDSSLDPETELDKAMEDEAF 120

Query: 121 RIFSSKISSIISS 134
           RIFSSKISSIISS
Sbjct: 121 RIFSSKISSIISS 133

[Close]

BLAST of Pay0017887 vs. ExPASy TrEMBL
Match: A0A0A0KDK5 (HIT-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G403610 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 4.7e-62
Identity = 124/133 (93.23%), Postives = 129/133 (96.99%), Query Frame = 0


Query: 1   MAPRECQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVLCAIKPVSEEDQSTAPNGSFVDR 60
           MAPR+CQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEV CAIKPVSE DQSTA NG+FVDR
Sbjct: 1   MAPRKCQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPCAIKPVSEGDQSTACNGTFVDR 60

Query: 61  PICVGDQNEVLEKSQLEAIASSSEIHNILNDEKLRKFILAIDSSLDPETELDKAMEDEAF 120
           PICVGDQNEVLEKSQLEAIASSSEIHNILNDEKL+KFILAIDSS DPETE+DKAMEDEAF
Sbjct: 61  PICVGDQNEVLEKSQLEAIASSSEIHNILNDEKLQKFILAIDSSPDPETEVDKAMEDEAF 120

Query: 121 RIFSSKISSIISS 134
           RIFSSKISSII+S
Sbjct: 121 RIFSSKISSIINS 133

[Close]

BLAST of Pay0017887 vs. ExPASy TrEMBL
Match: A0A6J1DXU2 (zinc finger HIT domain-containing protein 3 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024491 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.8e-54
Identity = 113/133 (84.96%), Postives = 118/133 (88.72%), Query Frame = 0


Query: 1   MAPRECQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVLCAIKPVSEEDQSTAPNGSFVDR 60
           M PR+CQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEV C +KPVS  DQSTAPNGS VDR
Sbjct: 1   MGPRQCQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPC-VKPVSAGDQSTAPNGSLVDR 60

Query: 61  PICVGDQNEVLEKSQLEAIASSSEIHNILNDEKLRKFILAIDSSLDPETELDKAMEDEAF 120
           PICV DQ+EVLEKSQLEAIASSSEI N LNDE L+K I AI SS DPETELD+AMEDEAF
Sbjct: 61  PICVEDQSEVLEKSQLEAIASSSEIRNTLNDESLQKLICAIGSSPDPETELDRAMEDEAF 120

Query: 121 RIFSSKISSIISS 134
           RIFSSKISSII S
Sbjct: 121 RIFSSKISSIIGS 132

[Close]

BLAST of Pay0017887 vs. ExPASy TrEMBL
Match: A0A6J1JZX2 (zinc finger HIT domain-containing protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111491210 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 3.1e-53
Identity = 112/133 (84.21%), Postives = 116/133 (87.22%), Query Frame = 0


Query: 1   MAPRECQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVLCAIKPVSEEDQSTAPNGSFVDR 60
           M PR+CQVCNEAPSKYKCPLCL PYCSLVCFKKHKEV C +KPVS EDQS APNGS VDR
Sbjct: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPC-VKPVSAEDQSIAPNGSPVDR 60

Query: 61  PICVGDQNEVLEKSQLEAIASSSEIHNILNDEKLRKFILAIDSSLDPETELDKAMEDEAF 120
           P+ VGDQNEVLEK+QLEAIASSSEI N LNDEKLR  I AIDSS DPE ELDKAMEDEAF
Sbjct: 61  PVFVGDQNEVLEKTQLEAIASSSEIRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAF 120

Query: 121 RIFSSKISSIISS 134
           RI SSKISSII S
Sbjct: 121 RILSSKISSIIGS 132

[Close]

BLAST of Pay0017887 vs. ExPASy TrEMBL
Match: A0A6J1ESW0 (zinc finger HIT domain-containing protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111437419 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 2.0e-52
Identity = 110/133 (82.71%), Postives = 115/133 (86.47%), Query Frame = 0


Query: 1   MAPRECQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVLCAIKPVSEEDQSTAPNGSFVDR 60
           M PR+CQVCNEAPSKYKCPLCL PYCSLVCFKKHKEV C +KPVS EDQS APNGS VDR
Sbjct: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPC-VKPVSAEDQSIAPNGSPVDR 60

Query: 61  PICVGDQNEVLEKSQLEAIASSSEIHNILNDEKLRKFILAIDSSLDPETELDKAMEDEAF 120
           P+ VGDQNEVLEK+QLEAIASSSEI N LNDEKLR  I AIDSS DPE ELDKAMEDEAF
Sbjct: 61  PVFVGDQNEVLEKAQLEAIASSSEIRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAF 120

Query: 121 RIFSSKISSIISS 134
           RI S KISSI+ S
Sbjct: 121 RILSGKISSIMGS 132

[Close]

BLAST of Pay0017887 vs. NCBI nr
Match: XP_008464779.1 (PREDICTED: zinc finger HIT domain-containing protein 3 isoform X1 [Cucumis melo] >XP_008464780.1 PREDICTED: zinc finger HIT domain-containing protein 3 isoform X1 [Cucumis melo])

HSP 1 Score: 262.7 bits (670), Expect = 1.7e-66
Identity = 132/133 (99.25%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 1   MAPRECQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVLCAIKPVSEEDQSTAPNGSFVDR 60
           MAPRECQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEV CAIKPVSEEDQSTAPNGSFVDR
Sbjct: 1   MAPRECQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPCAIKPVSEEDQSTAPNGSFVDR 60

Query: 61  PICVGDQNEVLEKSQLEAIASSSEIHNILNDEKLRKFILAIDSSLDPETELDKAMEDEAF 120
           PICVGDQNEVLEKSQLEAIASSSEIHNILNDEKLRKFILAIDSSLDPETELDKAMEDEAF
Sbjct: 61  PICVGDQNEVLEKSQLEAIASSSEIHNILNDEKLRKFILAIDSSLDPETELDKAMEDEAF 120

Query: 121 RIFSSKISSIISS 134
           RIFSSKISSIISS
Sbjct: 121 RIFSSKISSIISS 133

[Close]

BLAST of Pay0017887 vs. NCBI nr
Match: XP_004146755.1 (zinc finger HIT domain-containing protein 3 isoform X5 [Cucumis sativus] >KGN47795.1 hypothetical protein Csa_004183 [Cucumis sativus])

HSP 1 Score: 246.9 bits (629), Expect = 9.8e-62
Identity = 124/133 (93.23%), Postives = 129/133 (96.99%), Query Frame = 0


Query: 1   MAPRECQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVLCAIKPVSEEDQSTAPNGSFVDR 60
           MAPR+CQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEV CAIKPVSE DQSTA NG+FVDR
Sbjct: 1   MAPRKCQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPCAIKPVSEGDQSTACNGTFVDR 60

Query: 61  PICVGDQNEVLEKSQLEAIASSSEIHNILNDEKLRKFILAIDSSLDPETELDKAMEDEAF 120
           PICVGDQNEVLEKSQLEAIASSSEIHNILNDEKL+KFILAIDSS DPETE+DKAMEDEAF
Sbjct: 61  PICVGDQNEVLEKSQLEAIASSSEIHNILNDEKLQKFILAIDSSPDPETEVDKAMEDEAF 120

Query: 121 RIFSSKISSIISS 134
           RIFSSKISSII+S
Sbjct: 121 RIFSSKISSIINS 133

[Close]

BLAST of Pay0017887 vs. NCBI nr
Match: XP_022157884.1 (zinc finger HIT domain-containing protein 3 isoform X1 [Momordica charantia])

HSP 1 Score: 220.3 bits (560), Expect = 9.8e-54
Identity = 113/133 (84.96%), Postives = 118/133 (88.72%), Query Frame = 0


Query: 1   MAPRECQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVLCAIKPVSEEDQSTAPNGSFVDR 60
           M PR+CQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEV C +KPVS  DQSTAPNGS VDR
Sbjct: 1   MGPRQCQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVPC-VKPVSAGDQSTAPNGSLVDR 60

Query: 61  PICVGDQNEVLEKSQLEAIASSSEIHNILNDEKLRKFILAIDSSLDPETELDKAMEDEAF 120
           PICV DQ+EVLEKSQLEAIASSSEI N LNDE L+K I AI SS DPETELD+AMEDEAF
Sbjct: 61  PICVEDQSEVLEKSQLEAIASSSEIRNTLNDESLQKLICAIGSSPDPETELDRAMEDEAF 120

Query: 121 RIFSSKISSIISS 134
           RIFSSKISSII S
Sbjct: 121 RIFSSKISSIIGS 132

[Close]

BLAST of Pay0017887 vs. NCBI nr
Match: XP_038886971.1 (zinc finger HIT domain-containing protein 3 [Benincasa hispida] >XP_038886972.1 zinc finger HIT domain-containing protein 3 [Benincasa hispida])

HSP 1 Score: 218.0 bits (554), Expect = 4.9e-53
Identity = 110/133 (82.71%), Postives = 117/133 (87.97%), Query Frame = 0


Query: 1   MAPRECQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVLCAIKPVSEEDQSTAPNGSFVDR 60
           M PR+CQVCNEAPSKYKCPLCL PYCSLVCFKKHKEV CAI+PVS  DQ TAPNGS VDR
Sbjct: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPCAIEPVSAGDQPTAPNGSLVDR 60

Query: 61  PICVGDQNEVLEKSQLEAIASSSEIHNILNDEKLRKFILAIDSSLDPETELDKAMEDEAF 120
           PI V DQNE+LEK QLEAIASSSEIH+ LN E+L+K ILAIDSS DPETELDKAMEDEAF
Sbjct: 61  PIYVRDQNEILEKLQLEAIASSSEIHSDLNHERLQKLILAIDSSPDPETELDKAMEDEAF 120

Query: 121 RIFSSKISSIISS 134
            IFS+KISSII S
Sbjct: 121 HIFSTKISSIIGS 133

[Close]

BLAST of Pay0017887 vs. NCBI nr
Match: XP_022995777.1 (zinc finger HIT domain-containing protein 3 [Cucurbita maxima] >XP_022995779.1 zinc finger HIT domain-containing protein 3 [Cucurbita maxima])

HSP 1 Score: 217.6 bits (553), Expect = 6.4e-53
Identity = 112/133 (84.21%), Postives = 116/133 (87.22%), Query Frame = 0


Query: 1   MAPRECQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVLCAIKPVSEEDQSTAPNGSFVDR 60
           M PR+CQVCNEAPSKYKCPLCL PYCSLVCFKKHKEV C +KPVS EDQS APNGS VDR
Sbjct: 1   MGPRQCQVCNEAPSKYKCPLCLVPYCSLVCFKKHKEVPC-VKPVSAEDQSIAPNGSPVDR 60

Query: 61  PICVGDQNEVLEKSQLEAIASSSEIHNILNDEKLRKFILAIDSSLDPETELDKAMEDEAF 120
           P+ VGDQNEVLEK+QLEAIASSSEI N LNDEKLR  I AIDSS DPE ELDKAMEDEAF
Sbjct: 61  PVFVGDQNEVLEKTQLEAIASSSEIRNTLNDEKLRSLICAIDSSPDPEIELDKAMEDEAF 120

Query: 121 RIFSSKISSIISS 134
           RI SSKISSII S
Sbjct: 121 RILSSKISSIIGS 132

[Close]

BLAST of Pay0017887 vs. TAIR 10
Match: AT4G28820.2 (HIT-type Zinc finger family protein )

HSP 1 Score: 115.2 bits (287), Expect = 4.1e-26
Identity = 72/162 (44.44%), Postives = 88/162 (54.32%), Query Frame = 0


Query: 2   APRECQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVLCA--IKPVSEEDQSTAPNGSF-- 61
           A + C++C +  SKYKCP CL PYCSL CFK HKE  CA    P S E++  +P      
Sbjct: 5   ATQTCEICEKVVSKYKCPSCLVPYCSLGCFKIHKETPCAKPSDPSSTEEKPASPAKEVPV 64

Query: 62  ---------------------------VDRPICVGDQNEVLEKSQLEAIASSSEIHNILN 121
                                      V RPI V ++  +LEK+Q EAIASSSEI   L 
Sbjct: 65  KRPEEANDVVEKTQQKASAASPAKEIPVARPIIVEEEKYILEKTQFEAIASSSEIREALK 124

Query: 122 DEKLRKFILAIDSSLDPETELDKAMEDEAFRIFSSKISSIIS 133
           DE L+K I +IDSS +P  ELD+AM  EAFR F+ KI S IS
Sbjct: 125 DEPLQKLIYSIDSSSNPLQELDEAMGIEAFREFTDKILSNIS 166

[Close]

BLAST of Pay0017887 vs. TAIR 10
Match: AT4G28820.1 (HIT-type Zinc finger family protein )

HSP 1 Score: 113.2 bits (282), Expect = 1.6e-25
Identity = 75/164 (45.73%), Postives = 89/164 (54.27%), Query Frame = 0


Query: 2   APRECQVCNEAPSKYKCPLCLAPYCSLVCFKKHKEVLCAIKP------------------ 61
           A + C++C +  SKYKCP CL PYCSL CFK HKE  CA KP                  
Sbjct: 5   ATQTCEICEKVVSKYKCPSCLVPYCSLGCFKIHKETPCA-KPSDPSSTEEKPAASPAKEV 64

Query: 62  ----------VSEEDQSTAPNGS-----FVDRPICVGDQNEVLEKSQLEAIASSSEIHNI 121
                     V E+ Q  A   S      V RPI V ++  +LEK+Q EAIASSSEI   
Sbjct: 65  PVKRPEEANDVVEKTQQKASAASPAKEIPVARPIIVEEEKYILEKTQFEAIASSSEIREA 124

Query: 122 LNDEKLRKFILAIDSSLDPETELDKAMEDEAFRIFSSKISSIIS 133
           L DE L+K I +IDSS +P  ELD+AM  EAFR F+ KI S IS
Sbjct: 125 LKDEPLQKLIYSIDSSSNPLQELDEAMGIEAFREFTDKILSNIS 167

The following BLAST results are available for this feature:

BLAST of Pay0017887 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q15649	1.6e-06	26.81	Zinc finger HIT domain-containing protein 3 OS=Homo sapiens OX=9606 GN=ZNHIT3 PE...	[more]
Q6UIM1	4.6e-06	26.09	Zinc finger HIT domain-containing protein 3 (Fragment) OS=Macaca mulatta OX=9544...	[more]
Q9CQK1	4.6e-06	25.37	Zinc finger HIT domain-containing protein 3 OS=Mus musculus OX=10090 GN=Znhit3 P...	[more]
O36031	7.9e-06	31.30	Uncharacterized zinc-finger protein C4F10.19c OS=Schizosaccharomyces pombe (stra...	[more]
Q6UIM2	2.0e-04	24.81	Zinc finger HIT domain-containing protein 3 (Fragment) OS=Pan troglodytes OX=959...	[more]

BLAST of Pay0017887 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CM88	8.4e-67	99.25	zinc finger HIT domain-containing protein 3 isoform X1 OS=Cucumis melo OX=3656 G...	[more]
A0A0A0KDK5	4.7e-62	93.23	HIT-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G403610 PE...	[more]
A0A6J1DXU2	4.8e-54	84.96	zinc finger HIT domain-containing protein 3 isoform X1 OS=Momordica charantia OX...	[more]
A0A6J1JZX2	3.1e-53	84.21	zinc finger HIT domain-containing protein 3 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1ESW0	2.0e-52	82.71	zinc finger HIT domain-containing protein 3 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of Pay0017887 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464779.1	1.7e-66	99.25	PREDICTED: zinc finger HIT domain-containing protein 3 isoform X1 [Cucumis melo]...	[more]
XP_004146755.1	9.8e-62	93.23	zinc finger HIT domain-containing protein 3 isoform X5 [Cucumis sativus] >KGN477...	[more]
XP_022157884.1	9.8e-54	84.96	zinc finger HIT domain-containing protein 3 isoform X1 [Momordica charantia]	[more]
XP_038886971.1	4.9e-53	82.71	zinc finger HIT domain-containing protein 3 [Benincasa hispida] >XP_038886972.1 ...	[more]
XP_022995777.1	6.4e-53	84.21	zinc finger HIT domain-containing protein 3 [Cucurbita maxima] >XP_022995779.1 z...	[more]

BLAST of Pay0017887 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28820.2	4.1e-26	44.44	HIT-type Zinc finger family protein	[more]
AT4G28820.1	1.6e-25	45.73	HIT-type Zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.60.190		coord: 2..47 e-value: 1.5E-12 score: 49.0
None	No IPR available	PANTHER	PTHR13483	UNCHARACTERIZED	coord: 5..132
None	No IPR available	SUPERFAMILY	144232	HIT/MYND zinc finger-like	coord: 4..37
IPR007529	Zinc finger, HIT-type	PFAM	PF04438	zf-HIT	coord: 6..32 e-value: 8.8E-10 score: 38.3
IPR007529	Zinc finger, HIT-type	PROSITE	PS51083	ZF_HIT	coord: 6..39 score: 11.069423
IPR040197	Zinc finger HIT domain-containing protein 3	PANTHER	PTHR13483:SF11	ZINC FINGER HIT DOMAIN-CONTAINING PROTEIN 3	coord: 5..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0017887.2	Pay0017887.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000492	box C/D snoRNP assembly
biological_process	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0048254	snoRNA localization
cellular_component	GO:0005634	nucleus
cellular_component	GO:0070761	pre-snoRNP complex
molecular_function	GO:0046872	metal ion binding