Pay0017826 (gene) Melon (Payzawat) v1

Overview


Name	Pay0017826
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Localized to the inner membrane of the chloroplast
Location	chr07: 3055390 .. 3059206 (+)
RNA-Seq Expression	Pay0017826
Synteny	Pay0017826

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACATTCGACCAACAATGTGGATAATCTAAAGTAAATGCTTCATATCGTTACACGACGAGAATTTGTTGGAAGAAAAACCAGGAAGGAAGTTTCGATGTTCAAGTTGGGTCGAATGGGCTGAAATGGGCCTTTGGGCCGATATGTTAGGCTCATGGAAATTACCGTAATCGCAGTGCACCCAATAAAATATCCTAAAGGCCATCGAAATTATCGAACAAGAAACAATTTCCAGTCGTAATACTCTGCTTTGCCCTTCAACCGTCTTCTCTCCACATTTGTTTAACAGACCGCACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCGTTCATCATCTCTGGCACTCAACGATGACTGCTATATCTAATTCCTTGGTTTTAACGAAGAACCCTCAACTCCAGTTAACACATGGTAATTCTTACTACCTAATCTTTTCAGCATTTGATTTTATCTTTGATTTTTGTTTTTCTTTTTTACTATTCAACCTCCCCGTTTATTATCGATTCAATTTTAGCTGTTTTTCTTGCATTTCTTTTCTAATTTGCCCATCTCATCTAACATACTTTCTGTTTAATTTCGGGGGTGATCGTTTATGCTGGAGATTTAGGACTCCTGCTCTCGATTTCTTTAAATTGCCTATCATTTCCATTAAGAGCTATTGGGTTTCCTTCCAATTTGAATCTTGAATTACACCCAGTTTCAAATGGTAGCTACCTGCTACTTTTGAGTTTTGCCAACTTCTTAGCTCATAAATCAGTATTGGGTTATAACTTATATGCAGAGACGGCCTTGTTCTGTGGGCAATTTGTGAGGGGAATGTGGATTTCACTCACTGTTATGCAGCTTATGGTGGGATGTTTGTTCTTTCCTGATAGCTGTCAAAAGGCTTAGTTTTGATTACGTTGGCACTATTATTATTATTACTACTGTTTTTATCTTTTACATGAGAGCGTTGTCTGTGCAACTCAACTAATTTCACGGGAGGACATGTGTTTCAAGAAAACTCATAGGATATTAATTCTCTCTAAGTTTTTTATTTAAGCCAATGGTTCTTGTTGGCTACTAGGCGAAAATGGCTATTATATTGCCATGATGTTTTGATTATGTTGTCATGATGATTTACTTTTAATAGAAACAACTGCTTTCATTAACAAAAAATGAAGGAATACACTTTGTCATGATGAATTGATTATCAAATCAATGAAAAATTTGCAAGTCTTGGAAGATTGAATATGACTACTACATGGTTGCTCTCATTTCTGAACTTTGCAAGTGTTGGGGAGTGTACAAATGTACAAACCCTTTAGTTTCATCAGTGTAAACTCACTCTCGCAAATTATCCTGCCAGGATCAAATCTGAAAACTGTTGATAAACGTTTGGGGAGCTTGTCCCCTACCAGCTTAGTACTCAGTCCGGGTTGGGTGGGAAAGGCGAAGCTTTCTACATTCAGGCGGCCACTTTCAGTTCAAGCTGCATACAGGTATAATCTTCGAAATTGCTAATGAAACAATCAAGTCATCTTGTATGATAGAATTATAGTCTCAGGAGTCTCTTTGGAATGAATTATTATTAATCACTGATGTAACGATGTTAAACCTTTGCATGGTAAGAGTGCATGTCTAAAATCCTTGTGCATATAAGCTTATCATTGGGGTTTGCAAAAACTGGAAATAAAACTACCAAACAAAACCAAAGTGAACGTATTAACATAAGGCAATTGCTAATCAACAGCCGAGAATCTGATCAATTTGAACTAAGCCAGTCCAATTTCACGTGAGTGTGGAGCATTTGTTCCTATTATATTTGGGTGCTAAATGTTTAGAGGCAAGCCTAACACTTTGTGGAATTGTGTAGTCCACGCTCTCCTTTGGTTAATCTGTTGGGAGAGAAACAATAGGATTCTTAAATACAAGGAGACTGCCTCAATCTGAAATTTTTATTTAAAATCCTTCACACTTGGGTGAAAGATGTCTTTTCTTTTCCCGGATTTTTTTCTTGTTTGGGTAACGTGTAATTGAAGTCTTTGGTCATAATTAACTATTAGAAGACTCTAATGGTTTAGGTTTGGGAGGAGGATTTTTCTTCCCCAAGCCCTTAGGTTGTTTCTCTCTTGTTTTGTCTCTAAAGCATCGTTCTTATCCAAATAAATAAATAAAGCTCTGTATAGTTGAAAATAATGTACAGTAACAATTGTTAGTATCACATATAGCATTCACCAGTGTAAATTACTAATAATATTAGTATAAGTTTTAAATGGACATGGCCTGAGTTGATGTCTATTATATTGTATATTATCTCGGTTTGGCTGTCCTTTAGATTCATTTAAAATATTCTAATGGCAGTTAAGTTTATTTTGTACGTTATGACAGTGATGGTGGACGGTCAAGCAATGCAGGCATTTTTATTGGAGGTTTTGTATTGGGAGGGATCATTGTTGGCACACTTGGCTGTGTATATGCCCCTCAGGTAATTTACTTTTGTTCATCTCTTATCTAACCCCTGAATCGTACACCTGGGTAGTACAGCTAGTATATCTGTTACTTGTGTGCTACGGTCTTAGGTTACAACCTTATGGAAGATACCCATTTAAGTATTCTACCAAGAAATATGTGTAACTGTTGTGTTCGAGCTTCAAGTCTGAATCCTAGACTTTTTATTATGATTGAGAGTTGATCTAGTATTTGAATTACAGATTAGCAAGGCGATTGCTGGAGCAGACCGGAAAGATTTGATGAGGAAACTTCCCAAGTTCATATATGATGAAGAAAAAGCTTTAGAGGTGTGAAATCACTTTGTCTCTTCTTATTTGTTGCAAGTTCTCCTGAATGGACGTTTGGTCTTCACTTGGCACTAATTTAGTGAAGATTGATTTACCAAATGATAATCGTGAATTTTATTTTATTTATTGGTAATATCACATATAGACTTCTTAACCACCCTGAGTTGGCAACGAAATGTAGTTGCTTGTCAGATATATCAAAATGTTCTCGTGTAATTCTAGTTTCGGCAATTTTGCTGGGGGTATTTGACTTGGGGAAATATAACAATATGTTTTTGGTTTTTGACGTGCCAACATGACCATGTTTTTTTCTTTAATTCAAAATGCAGAAAACAAGAAAAGTGCTGGCACAGAAGATTGAACAGTTGAACTCTGCAATTGATGAGGTTTCTGCTCAGCTCCGCCCAGAGGATCCCCCAAATGGAGTGGCTGTGAACTCTGACGAAGTTGAATCTGCCATTTGAAAGAATTGTTACATCGGCCTTCTTCCTTCGTCACACACGACTCCAGGACTCGGAATAATAGTTAATTTTCTAGCTATTATCTTTGATTTTCTCTTTCTTGAACACTTGGATCCGAGCTTTGATGTGTAATATTCATCATCGCATAATGTGTTGCTAGGATCGCTCAAATGCTCCATATAAAAGTTGAATAGATTTGTAGAAGAGCATTCTTGCTGTGTTTTCTATTTTGTACACGAACAACAAGGCATTGTTTTGTATTTGAAAGCCACATATTTCATCCCTCCCGCCTTCTTATTTGCATTTTTTATCATTCGTCTACCTCTCGAGTCACAACTCACCAGCCAAATGACTCCTTGTCAGTGGATTTGACTTTCACAAAACTTTCGACAGTTTGAACTAAAAAGTTACGCTCAAATCTAAAATAAGTTTTAATGATCCAGACAATGAACATTTTTTCTGTGTTCTCATTCCCTTTGTTTTTTCTCGCTTTTGCTCCCACCTTTTCTTCTCAGTACTTGTACCTCACTATCTCTCGAGCTTGATATTTTTTTTCAGCGAC

mRNA sequence

GACATTCGACCAACAATGTGGATAATCTAAAGTAAATGCTTCATATCGTTACACGACGAGAATTTGTTGGAAGAAAAACCAGGAAGGAAGTTTCGATGTTCAAGTTGGGTCGAATGGGCTGAAATGGGCCTTTGGGCCGATATGTTAGGCTCATGGAAATTACCGTAATCGCAGTGCACCCAATAAAATATCCTAAAGGCCATCGAAATTATCGAACAAGAAACAATTTCCAGTCGTAATACTCTGCTTTGCCCTTCAACCGTCTTCTCTCCACATTTGTTTAACAGACCGCACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCGTTCATCATCTCTGGCACTCAACGATGACTGCTATATCTAATTCCTTGGTTTTAACGAAGAACCCTCAACTCCAGTTAACACATGGATCAAATCTGAAAACTGTTGATAAACGTTTGGGGAGCTTGTCCCCTACCAGCTTAGTACTCAGTCCGGGTTGGGTGGGAAAGGCGAAGCTTTCTACATTCAGGCGGCCACTTTCAGTTCAAGCTGCATACAGTGATGGTGGACGGTCAAGCAATGCAGGCATTTTTATTGGAGGTTTTGTATTGGGAGGGATCATTGTTGGCACACTTGGCTGTGTATATGCCCCTCAGATTAGCAAGGCGATTGCTGGAGCAGACCGGAAAGATTTGATGAGGAAACTTCCCAAGTTCATATATGATGAAGAAAAAGCTTTAGAGAAAACAAGAAAAGTGCTGGCACAGAAGATTGAACAGTTGAACTCTGCAATTGATGAGGTTTCTGCTCAGCTCCGCCCAGAGGATCCCCCAAATGGAGTGGCTGTGAACTCTGACGAAGTTGAATCTGCCATTTGAAAGAATTGTTACATCGGCCTTCTTCCTTCGTCACACACGACTCCAGGACTCGGAATAATAGTTAATTTTCTAGCTATTATCTTTGATTTTCTCTTTCTTGAACACTTGGATCCGAGCTTTGATGTGTAATATTCATCATCGCATAATGTGTTGCTAGGATCGCTCAAATGCTCCATATAAAAGTTGAATAGATTTGTAGAAGAGCATTCTTGCTGTGTTTTCTATTTTGTACACGAACAACAAGGCATTGTTTTGTATTTGAAAGCCACATATTTCATCCCTCCCGCCTTCTTATTTGCATTTTTTATCATTCGTCTACCTCTCGAGTCACAACTCACCAGCCAAATGACTCCTTGTCAGTGGATTTGACTTTCACAAAACTTTCGACAGTTTGAACTAAAAAGTTACGCTCAAATCTAAAATAAGTTTTAATGATCCAGACAATGAACATTTTTTCTGTGTTCTCATTCCCTTTGTTTTTTCTCGCTTTTGCTCCCACCTTTTCTTCTCAGTACTTGTACCTCACTATCTCTCGAGCTTGATATTTTTTTTCAGCGAC

Coding sequence (CDS)

ATGACTGCTATATCTAATTCCTTGGTTTTAACGAAGAACCCTCAACTCCAGTTAACACATGGATCAAATCTGAAAACTGTTGATAAACGTTTGGGGAGCTTGTCCCCTACCAGCTTAGTACTCAGTCCGGGTTGGGTGGGAAAGGCGAAGCTTTCTACATTCAGGCGGCCACTTTCAGTTCAAGCTGCATACAGTGATGGTGGACGGTCAAGCAATGCAGGCATTTTTATTGGAGGTTTTGTATTGGGAGGGATCATTGTTGGCACACTTGGCTGTGTATATGCCCCTCAGATTAGCAAGGCGATTGCTGGAGCAGACCGGAAAGATTTGATGAGGAAACTTCCCAAGTTCATATATGATGAAGAAAAAGCTTTAGAGAAAACAAGAAAAGTGCTGGCACAGAAGATTGAACAGTTGAACTCTGCAATTGATGAGGTTTCTGCTCAGCTCCGCCCAGAGGATCCCCCAAATGGAGTGGCTGTGAACTCTGACGAAGTTGAATCTGCCATTTGA

Protein sequence

MTAISNSLVLTKNPQLQLTHGSNLKTVDKRLGSLSPTSLVLSPGWVGKAKLSTFRRPLSVQAAYSDGGRSSNAGIFIGGFVLGGIIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRPEDPPNGVAVNSDEVESAI

Homology

[Close]

BLAST of Pay0017826 vs. ExPASy TrEMBL
Match: A0A1S3BV81 (uncharacterized protein LOC103493844 OS=Cucumis melo OX=3656 GN=LOC103493844 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 3.9e-85
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MTAISNSLVLTKNPQLQLTHGSNLKTVDKRLGSLSPTSLVLSPGWVGKAKLSTFRRPLSV 60
           MTAISNSLVLTKNPQLQLTHGSNLKTVDKRLGSLSPTSLVLSPGWVGKAKLSTFRRPLSV
Sbjct: 1   MTAISNSLVLTKNPQLQLTHGSNLKTVDKRLGSLSPTSLVLSPGWVGKAKLSTFRRPLSV 60

Query: 61  QAAYSDGGRSSNAGIFIGGFVLGGIIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD 120
           QAAYSDGGRSSNAGIFIGGFVLGGIIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD
Sbjct: 61  QAAYSDGGRSSNAGIFIGGFVLGGIIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSAQLRPEDPPNGVAVNSDEVESAI 171
           EEKALEKTRKVLAQKIEQLNSAIDEVSAQLRPEDPPNGVAVNSDEVESAI
Sbjct: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSAQLRPEDPPNGVAVNSDEVESAI 170

[Close]

BLAST of Pay0017826 vs. ExPASy TrEMBL
Match: A0A6J1FTW3 (uncharacterized protein LOC111446794 OS=Cucurbita moschata OX=3662 GN=LOC111446794 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.1e-75
Identity = 151/170 (88.82%), Postives = 161/170 (94.71%), Query Frame = 0


Query: 1   MTAISNSLVLTKNPQLQLTHGSNLKTVDKRLGSLSPTSLVLSPGWVGKAKLSTFRRPLSV 60
           M+AISNSL+LTK PQLQL+ GSNLKT DKR GS+SPT L+L+PGWVGKAKLSTFRRPLSV
Sbjct: 1   MSAISNSLILTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSV 60

Query: 61  QAAYSDGGRSSNAGIFIGGFVLGGIIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD 120
           QAAYSDGGRSS+AGIFIGGFVLGG+IVGTLGCVYAPQISKA+AG DRKDLMRKLPKFIYD
Sbjct: 61  QAAYSDGGRSSSAGIFIGGFVLGGLIVGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSAQLRPEDPPNGVAVNSDEVESAI 171
           EEKALEKTRKVLAQKIEQLNSAIDEVS+QLR ED PNGVAVNSDEVE AI
Sbjct: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI 170

[Close]

BLAST of Pay0017826 vs. ExPASy TrEMBL
Match: A0A6J1FC82 (uncharacterized protein LOC111442778 OS=Cucurbita moschata OX=3662 GN=LOC111442778 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.8e-75
Identity = 150/170 (88.24%), Postives = 161/170 (94.71%), Query Frame = 0


Query: 1   MTAISNSLVLTKNPQLQLTHGSNLKTVDKRLGSLSPTSLVLSPGWVGKAKLSTFRRPLSV 60
           M AISNSLV TKNPQLQL+ GSNLKT DK LGS+SPTSL+L+PGWVGKAKLST RRPLSV
Sbjct: 1   MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60

Query: 61  QAAYSDGGRSSNAGIFIGGFVLGGIIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD 120
           QAAYSDGGRSSNAGIF+GGFVLGG+IVGTLGCVYAPQISKA+AG DRK+LMRKLPKFIYD
Sbjct: 61  QAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSAQLRPEDPPNGVAVNSDEVESAI 171
           EEKALEKTRKVLAQKIEQLNSAIDEVS+QLR +DPPNGVAVNSDE+E AI
Sbjct: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 170

[Close]

BLAST of Pay0017826 vs. ExPASy TrEMBL
Match: A0A6J1IT36 (uncharacterized protein LOC111480366 OS=Cucurbita maxima OX=3661 GN=LOC111480366 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.7e-75
Identity = 151/170 (88.82%), Postives = 161/170 (94.71%), Query Frame = 0


Query: 1   MTAISNSLVLTKNPQLQLTHGSNLKTVDKRLGSLSPTSLVLSPGWVGKAKLSTFRRPLSV 60
           M+AISNSLVLTK PQLQL+ GSNLKT DKR GS+SPT L+L+PGWVGKAKLSTFRRPLSV
Sbjct: 1   MSAISNSLVLTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSV 60

Query: 61  QAAYSDGGRSSNAGIFIGGFVLGGIIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD 120
           QAAYSDGGRSS+AGIFIGGFVLGG+IVGTLGCVYAPQISKA+AG DRKDLMRKLPKFIYD
Sbjct: 61  QAAYSDGGRSSSAGIFIGGFVLGGLIVGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSAQLRPEDPPNGVAVNSDEVESAI 171
           EEKA+EKTRKVLAQKIEQLNSAIDEVS+QLR ED PNGVAVNSDEVE AI
Sbjct: 121 EEKAVEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI 170

[Close]

BLAST of Pay0017826 vs. ExPASy TrEMBL
Match: A0A6J1IGB6 (uncharacterized protein LOC111474436 OS=Cucurbita maxima OX=3661 GN=LOC111474436 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 6.9e-74
Identity = 148/170 (87.06%), Postives = 159/170 (93.53%), Query Frame = 0


Query: 1   MTAISNSLVLTKNPQLQLTHGSNLKTVDKRLGSLSPTSLVLSPGWVGKAKLSTFRRPLSV 60
           M AISNSLV TKNPQL L+ GSNLKT DK LGS+SPTSL+L+PGWVGKAKLST RRPLSV
Sbjct: 1   MAAISNSLVSTKNPQLPLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60

Query: 61  QAAYSDGGRSSNAGIFIGGFVLGGIIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD 120
           QAAYSD GRSSNAGIF+GGFVLGG+IVGTLGCVYAPQISKA+AG DRK+LMRKLPKFIYD
Sbjct: 61  QAAYSDSGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSAQLRPEDPPNGVAVNSDEVESAI 171
           EEKALEKTRKVLAQKIEQLNSAIDEVS+QLR +DPPNGVAVNSDE+E AI
Sbjct: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 170

[Close]

BLAST of Pay0017826 vs. NCBI nr
Match: XP_008453013.1 (PREDICTED: uncharacterized protein LOC103493844 [Cucumis melo])

HSP 1 Score: 323.9 bits (829), Expect = 8.1e-85
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MTAISNSLVLTKNPQLQLTHGSNLKTVDKRLGSLSPTSLVLSPGWVGKAKLSTFRRPLSV 60
           MTAISNSLVLTKNPQLQLTHGSNLKTVDKRLGSLSPTSLVLSPGWVGKAKLSTFRRPLSV
Sbjct: 1   MTAISNSLVLTKNPQLQLTHGSNLKTVDKRLGSLSPTSLVLSPGWVGKAKLSTFRRPLSV 60

Query: 61  QAAYSDGGRSSNAGIFIGGFVLGGIIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD 120
           QAAYSDGGRSSNAGIFIGGFVLGGIIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD
Sbjct: 61  QAAYSDGGRSSNAGIFIGGFVLGGIIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSAQLRPEDPPNGVAVNSDEVESAI 171
           EEKALEKTRKVLAQKIEQLNSAIDEVSAQLRPEDPPNGVAVNSDEVESAI
Sbjct: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSAQLRPEDPPNGVAVNSDEVESAI 170

[Close]

BLAST of Pay0017826 vs. NCBI nr
Match: XP_038900139.1 (uncharacterized protein LOC120087268 [Benincasa hispida])

HSP 1 Score: 301.2 bits (770), Expect = 5.6e-78
Identity = 157/170 (92.35%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 1   MTAISNSLVLTKNPQLQLTHGSNLKTVDKRLGSLSPTSLVLSPGWVGKAKLSTFRRPLSV 60
           MTAISNSLVLTKNPQLQL+ GSNLKT +K LGS+SPTSL+L PGWVGK KLSTFRRPLSV
Sbjct: 1   MTAISNSLVLTKNPQLQLSPGSNLKTANKHLGSVSPTSLLLGPGWVGKTKLSTFRRPLSV 60

Query: 61  QAAYSDGGRSSNAGIFIGGFVLGGIIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD 120
           QAAYSDGGRSSNAGIFIGGFVLGG+IVGTLGCVYAPQISKA+AGADRKDLMRKLPKFIYD
Sbjct: 61  QAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKALAGADRKDLMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSAQLRPEDPPNGVAVNSDEVESAI 171
           EEKALEKTRKVLAQKIEQLNSAIDEVSAQLR EDPPNGVAVNSDEVE AI
Sbjct: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNGVAVNSDEVEPAI 170

[Close]

BLAST of Pay0017826 vs. NCBI nr
Match: XP_022941515.1 (uncharacterized protein LOC111446794 [Cucurbita moschata])

HSP 1 Score: 291.6 bits (745), Expect = 4.4e-75
Identity = 151/170 (88.82%), Postives = 161/170 (94.71%), Query Frame = 0


Query: 1   MTAISNSLVLTKNPQLQLTHGSNLKTVDKRLGSLSPTSLVLSPGWVGKAKLSTFRRPLSV 60
           M+AISNSL+LTK PQLQL+ GSNLKT DKR GS+SPT L+L+PGWVGKAKLSTFRRPLSV
Sbjct: 1   MSAISNSLILTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSV 60

Query: 61  QAAYSDGGRSSNAGIFIGGFVLGGIIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD 120
           QAAYSDGGRSS+AGIFIGGFVLGG+IVGTLGCVYAPQISKA+AG DRKDLMRKLPKFIYD
Sbjct: 61  QAAYSDGGRSSSAGIFIGGFVLGGLIVGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSAQLRPEDPPNGVAVNSDEVESAI 171
           EEKALEKTRKVLAQKIEQLNSAIDEVS+QLR ED PNGVAVNSDEVE AI
Sbjct: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI 170

[Close]

BLAST of Pay0017826 vs. NCBI nr
Match: XP_023521457.1 (uncharacterized protein LOC111785280 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 291.2 bits (744), Expect = 5.8e-75
Identity = 150/170 (88.24%), Postives = 161/170 (94.71%), Query Frame = 0


Query: 1   MTAISNSLVLTKNPQLQLTHGSNLKTVDKRLGSLSPTSLVLSPGWVGKAKLSTFRRPLSV 60
           M+AISNSL+LTK PQLQL+ GSNLKT DKR GS+SPT L+L+PGWVGKAKLSTFRRPLSV
Sbjct: 1   MSAISNSLILTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSV 60

Query: 61  QAAYSDGGRSSNAGIFIGGFVLGGIIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD 120
           QAAYSDGGRSS+AGIFIGGFVLGG++VGTLGCVYAPQISKA+AG DRKDLMRKLPKFIYD
Sbjct: 61  QAAYSDGGRSSSAGIFIGGFVLGGLVVGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSAQLRPEDPPNGVAVNSDEVESAI 171
           EEKALEKTRKVLAQKIEQLNSAIDEVS+QLR ED PNGVAVNSDEVE AI
Sbjct: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI 170

[Close]

BLAST of Pay0017826 vs. NCBI nr
Match: XP_022936063.1 (uncharacterized protein LOC111442778 [Cucurbita moschata])

HSP 1 Score: 291.2 bits (744), Expect = 5.8e-75
Identity = 150/170 (88.24%), Postives = 161/170 (94.71%), Query Frame = 0


Query: 1   MTAISNSLVLTKNPQLQLTHGSNLKTVDKRLGSLSPTSLVLSPGWVGKAKLSTFRRPLSV 60
           M AISNSLV TKNPQLQL+ GSNLKT DK LGS+SPTSL+L+PGWVGKAKLST RRPLSV
Sbjct: 1   MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60

Query: 61  QAAYSDGGRSSNAGIFIGGFVLGGIIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD 120
           QAAYSDGGRSSNAGIF+GGFVLGG+IVGTLGCVYAPQISKA+AG DRK+LMRKLPKFIYD
Sbjct: 61  QAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSAQLRPEDPPNGVAVNSDEVESAI 171
           EEKALEKTRKVLAQKIEQLNSAIDEVS+QLR +DPPNGVAVNSDE+E AI
Sbjct: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 170

[Close]

BLAST of Pay0017826 vs. TAIR 10
Match: AT1G42960.1 (expressed protein localized to the inner membrane of the chloroplast. )

HSP 1 Score: 171.0 bits (432), Expect = 8.1e-43
Identity = 84/114 (73.68%), Postives = 102/114 (89.47%), Query Frame = 0


Query: 55  RRPLSVQAAYSDGGRSSNAGIFIGGFVLGGIIVGTLGCVYAPQISKAIAGADRKDLMRKL 114
           +R L++Q+AY D   S + G+F+GGF+LGG+IVG LGCVYAPQISKAIAGADRKDLMRKL
Sbjct: 53  KRILTIQSAYRDDDGSGSTGLFVGGFILGGLIVGALGCVYAPQISKAIAGADRKDLMRKL 112

Query: 115 PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLRPEDPPNGVAVNSDEVES 169
           PKFIYDEEKALEKTRKVLA+KI QLNSAID+VS+QL+ ED PNG A+++DE+E+
Sbjct: 113 PKFIYDEEKALEKTRKVLAEKIAQLNSAIDDVSSQLKSEDTPNGAALSTDEIEA 166

[Close]

BLAST of Pay0017826 vs. TAIR 10
Match: AT5G16660.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 79.7 bits (195), Expect = 2.5e-15
Identity = 46/102 (45.10%), Postives = 64/102 (62.75%), Query Frame = 0


Query: 50  KLSTFRRPLSVQAAYSDGGRSSNAGIFIGGFVLGGIIVGTLGCVYAPQISKAIAGADRKD 109
           K S   R  SV A Y DG RS ++G FI GF+LGG + G +  ++APQI +++   + + 
Sbjct: 45  KKSNRTRKFSVSAGYRDGSRSGSSGDFIAGFLLGGAVFGAVAYIFAPQIRRSVLNEEDEY 104

Query: 110 LMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLR 152
              K  +  Y +E  LEKTR+ L +KI QLNSAID VS++LR
Sbjct: 105 GFEKPKQPTYYDE-GLEKTRETLNEKIGQLNSAIDNVSSRLR 145

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BLAST of Pay0017826 vs. TAIR 10
Match: AT5G16660.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02900.1); Has 106 Blast hits to 106 proteins in 32 species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 5.1e-13
Identity = 45/102 (44.12%), Postives = 63/102 (61.76%), Query Frame = 0


Query: 50  KLSTFRRPLSVQAAYSDGGRSSNAGIFIGGFVLGGIIVGTLGCVYAPQISKAIAGADRKD 109
           K S   R  SV A   DG RS ++G FI GF+LGG + G +  ++APQI +++   + + 
Sbjct: 45  KKSNRTRKFSVSA--GDGSRSGSSGDFIAGFLLGGAVFGAVAYIFAPQIRRSVLNEEDEY 104

Query: 110 LMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLR 152
              K  +  Y +E  LEKTR+ L +KI QLNSAID VS++LR
Sbjct: 105 GFEKPKQPTYYDE-GLEKTRETLNEKIGQLNSAIDNVSSRLR 143

[Close]

BLAST of Pay0017826 vs. TAIR 10
Match: AT3G02900.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16660.1); Has 80 Blast hits to 80 proteins in 21 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 68.9 bits (167), Expect = 4.4e-12
Identity = 37/94 (39.36%), Postives = 57/94 (60.64%), Query Frame = 0


Query: 58  LSVQAAYSDGGRSSNAGIFIGGFVLGGIIVGTLGCVYAPQISKAIAGADRKDLMRKLPKF 117
           LSV A Y  G +   +  F+ GF+LG  + GTL  ++APQI +++   +     +     
Sbjct: 44  LSVSAGYRGGSKGGGSSDFVTGFLLGSAVFGTLAYIFAPQIRRSVLSENEYGFKKPEQPM 103

Query: 118 IYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLR 152
            YDE   LE+ R++L +KI QLNSAID+VS++L+
Sbjct: 104 YYDE--GLEERREILNEKIGQLNSAIDKVSSRLK 135

[Close]

BLAST of Pay0017826 vs. TAIR 10
Match: AT3G02900.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16660.1). )

HSP 1 Score: 68.9 bits (167), Expect = 4.4e-12
Identity = 37/94 (39.36%), Postives = 57/94 (60.64%), Query Frame = 0


Query: 58  LSVQAAYSDGGRSSNAGIFIGGFVLGGIIVGTLGCVYAPQISKAIAGADRKDLMRKLPKF 117
           LSV A Y  G +   +  F+ GF+LG  + GTL  ++APQI +++   +     +     
Sbjct: 43  LSVSAGYRGGSKGGGSSDFVTGFLLGSAVFGTLAYIFAPQIRRSVLSENEYGFKKPEQPM 102

Query: 118 IYDEEKALEKTRKVLAQKIEQLNSAIDEVSAQLR 152
            YDE   LE+ R++L +KI QLNSAID+VS++L+
Sbjct: 103 YYDE--GLEERREILNEKIGQLNSAIDKVSSRLK 134

The following BLAST results are available for this feature:

BLAST of Pay0017826 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0017826 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BV81	3.9e-85	100.00	uncharacterized protein LOC103493844 OS=Cucumis melo OX=3656 GN=LOC103493844 PE=...	[more]
A0A6J1FTW3	2.1e-75	88.82	uncharacterized protein LOC111446794 OS=Cucurbita moschata OX=3662 GN=LOC1114467...	[more]
A0A6J1FC82	2.8e-75	88.24	uncharacterized protein LOC111442778 OS=Cucurbita moschata OX=3662 GN=LOC1114427...	[more]
A0A6J1IT36	3.7e-75	88.82	uncharacterized protein LOC111480366 OS=Cucurbita maxima OX=3661 GN=LOC111480366...	[more]
A0A6J1IGB6	6.9e-74	87.06	uncharacterized protein LOC111474436 OS=Cucurbita maxima OX=3661 GN=LOC111474436...	[more]

BLAST of Pay0017826 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453013.1	8.1e-85	100.00	PREDICTED: uncharacterized protein LOC103493844 [Cucumis melo]	[more]
XP_038900139.1	5.6e-78	92.35	uncharacterized protein LOC120087268 [Benincasa hispida]	[more]
XP_022941515.1	4.4e-75	88.82	uncharacterized protein LOC111446794 [Cucurbita moschata]	[more]
XP_023521457.1	5.8e-75	88.24	uncharacterized protein LOC111785280 [Cucurbita pepo subsp. pepo]	[more]
XP_022936063.1	5.8e-75	88.24	uncharacterized protein LOC111442778 [Cucurbita moschata]	[more]

BLAST of Pay0017826 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G42960.1	8.1e-43	73.68	expressed protein localized to the inner membrane of the chloroplast.	[more]
AT5G16660.1	2.5e-15	45.10	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G16660.2	5.1e-13	44.12	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G02900.1	4.4e-12	39.36	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G02900.2	4.4e-12	39.36	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 122..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..170
None	No IPR available	PANTHER	PTHR34048	LOW-DENSITY RECEPTOR-LIKE PROTEIN	coord: 1..170
None	No IPR available	PANTHER	PTHR34048:SF9	SUBFAMILY NOT NAMED	coord: 1..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0017826.1	Pay0017826.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane