Pay0017546 (gene) Melon (Payzawat) v1

Overview


Name	Pay0017546
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Cox19-like CHCH family protein
Location	chr09: 22878853 .. 22879931 (+)
RNA-Seq Expression	Pay0017546
Synteny	Pay0017546

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAATCCACCGTGTGAGCTGGCACGTGCGAGCCAGTTTTCCCCCTTTTCCCACTCGTCCTCTCCTCATTCTTTCATTCCTTTGTAAAAGGAAAAACAAGGTGCAGCAGCACACCGGTTTTTGAAATCCACTTCCATTTCCGCCATGGATGAACCTCAACCTCAGCCAGTTTGCGCTCAGGAAGCTCTCAATTTGCTCAACTGCGTTACCGAATCTCCCTTCGATCAAGACAAATGCTACCGTCTCCTTCATTCTTTGCGTGAATGCGTGCTCAGCAAGGTAATTCAGTCATTCCTTCTCTTCAATTTGCCCTAACCCTTCATCATTTGTTTCCTTGGGTTCTTGTTATTAATTAGTACTGTTTTTTTTTTGGAATTTTTGAATTAGGTCATCTAGTTCTCCTAATTGAAGTTCGATTGTCATTCTTCGAATTGTGATAATTAATTAGTCTTTTTTACTTTTAGGATTAGTGAAATGGAAATAGATTCGGGTGGATTTTGGTTTATTGCTGATTAACATATCCATCAAACGTGTGGGGAGATCTTGATTTGAATTTCTGTTTCTGATGCTATTTTCTTTGGTTTGTTGCTTCAATAGAAAGTGAAGAAATTCTCTCTGGCTGAAGAAGAACAAACAAAACCAATAGTCAAGAAGAATTCTTGAAGGAAGCAATTTTGTAAGACTGATTTTGTCCATTTTAAAGTAGGGTCTTGTGTTACTTTACTTGATTTTTTTTTTTCATTTCTTGGAGAGATTGGACTTTTGCTGAATTCTATCAAAATGATTTAGAATTGAATTCTATCAAATTGGTGACCATTGAATTCCCCAATAAATTCTGTTTCTGGAATCTGAAAGATTTGTCCATTTCTCATAGGTTATATAGCAAATCCATTGAATTTCTTCAGAACAACGTTCTTTTAACTCAAAGAAGCTTATGGATATCAATTATGTTCGTTTCATTCGATCATTCTAATCTGTCAACATGACATGCTAAGCTTAGCTTGGTGGTGTATTTTTAAGCTTAGCTTGGTGCCAACATGGGTACGACATGACATCGACACGACAATATGCTTATGAA

mRNA sequence

GAAAAATCCACCGTGTGAGCTGGCACGTGCGAGCCAGTTTTCCCCCTTTTCCCACTCGTCCTCTCCTCATTCTTTCATTCCTTTGTAAAAGGAAAAACAAGGTGCAGCAGCACACCGGTTTTTGAAATCCACTTCCATTTCCGCCATGGATGAACCTCAACCTCAGCCAGTTTGCGCTCAGGAAGCTCTCAATTTGCTCAACTGCGTTACCGAATCTCCCTTCGATCAAGACAAATGCTACCGTCTCCTTCATTCTTTGCGTGAATGCGTGCTCAGCAAGAAAGTGAAGAAATTCTCTCTGGCTGAAGAAGAACAAACAAAACCAATAGTCAAGAAGAATTCTTGAAGGAAGCAATTTTGTAAGACTGATTTTGTCCATTTTAAAGTAGGGTCTTGTGTTACTTTACTTGATTTTTTTTTTTCATTTCTTGGAGAGATTGGACTTTTGCTGAATTCTATCAAAATGATTTAGAATTGAATTCTATCAAATTGGTGACCATTGAATTCCCCAATAAATTCTGTTTCTGGAATCTGAAAGATTTGTCCATTTCTCATAGGTTATATAGCAAATCCATTGAATTTCTTCAGAACAACGTTCTTTTAACTCAAAGAAGCTTATGGATATCAATTATGTTCGTTTCATTCGATCATTCTAATCTGTCAACATGACATGCTAAGCTTAGCTTGGTGGTGTATTTTTAAGCTTAGCTTGGTGCCAACATGGGTACGACATGACATCGACACGACAATATGCTTATGAA

Coding sequence (CDS)

ATGGATGAACCTCAACCTCAGCCAGTTTGCGCTCAGGAAGCTCTCAATTTGCTCAACTGCGTTACCGAATCTCCCTTCGATCAAGACAAATGCTACCGTCTCCTTCATTCTTTGCGTGAATGCGTGCTCAGCAAGAAAGTGAAGAAATTCTCTCTGGCTGAAGAAGAACAAACAAAACCAATAGTCAAGAAGAATTCTTGA

Protein sequence

MDEPQPQPVCAQEALNLLNCVTESPFDQDKCYRLLHSLRECVLSKKVKKFSLAEEEQTKPIVKKNS

Homology

[Close]

BLAST of Pay0017546 vs. ExPASy TrEMBL
Match: A0A5D3C4E2 (Cox19-like CHCH family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G002030 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 7.7e-29
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1  MDEPQPQPVCAQEALNLLNCVTESPFDQDKCYRLLHSLRECVLSKKVKKFSLAEEEQTKP 60
          MDEPQPQPVCAQEALNLLNCVTESPFDQDKCYRLLHSLRECVLSKKVKKFSLAEEEQTKP
Sbjct: 1  MDEPQPQPVCAQEALNLLNCVTESPFDQDKCYRLLHSLRECVLSKKVKKFSLAEEEQTKP 60

Query: 61 IVKKNS 67
          IVKKNS
Sbjct: 61 IVKKNS 66

[Close]

BLAST of Pay0017546 vs. ExPASy TrEMBL
Match: A0A0A0KQS7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G151520 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 6.5e-28
Identity = 63/66 (95.45%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1  MDEPQPQPVCAQEALNLLNCVTESPFDQDKCYRLLHSLRECVLSKKVKKFSLAEEEQTKP 60
          MDEPQPQPVCAQEALNLLNCVTESPFDQ+KCYRLLHSLRECVLSKKVKKFSLAEEEQTKP
Sbjct: 1  MDEPQPQPVCAQEALNLLNCVTESPFDQEKCYRLLHSLRECVLSKKVKKFSLAEEEQTKP 60

Query: 61 IVKKNS 67
          I+KKN+
Sbjct: 61 IIKKNA 66

[Close]

BLAST of Pay0017546 vs. ExPASy TrEMBL
Match: A0A5J4ZSA8 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_011592 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.1e-18
Identity = 53/68 (77.94%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 1  MDEPQ-PQPVCAQEALNLLNCVTESPFDQDKCYRLLHSLRECVLSKKVKKFSLAEEE--Q 60
          MD+ Q PQPVCAQEALNLLNCVTESPFDQDKC RLLHSLR+CV SKKVKKFSLAE++  +
Sbjct: 1  MDQGQPPQPVCAQEALNLLNCVTESPFDQDKCLRLLHSLRDCVQSKKVKKFSLAEQKGGE 60

Query: 61 TKPIVKKN 66
            PI KK+
Sbjct: 61 ADPISKKH 68

[Close]

BLAST of Pay0017546 vs. ExPASy TrEMBL
Match: A0A7J7CJI7 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW16G00654 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.4e-16
Identity = 43/56 (76.79%), Postives = 53/56 (94.64%), Query Frame = 0


Query: 1  MDEPQPQPVCAQEALNLLNCVTESPFDQDKCYRLLHSLRECVLSKKVKKFSLAEEE 57
          MDE + +PVCAQEAL+LLNCVT+SPFDQ+KC +LL+SLRECVL+KKVKKFSLA++E
Sbjct: 1  MDEARARPVCAQEALDLLNCVTQSPFDQEKCVQLLNSLRECVLNKKVKKFSLADQE 56

[Close]

BLAST of Pay0017546 vs. ExPASy TrEMBL
Match: A0A5N5NC68 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_004631 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.7e-16
Identity = 42/57 (73.68%), Postives = 52/57 (91.23%), Query Frame = 0


Query: 1  MDEPQPQPVCAQEALNLLNCVTESPFDQDKCYRLLHSLRECVLSKKVKKFSLAEEEQ 58
          MDE + +PVCA+EALNLLNCV +SP+DQDKC RLL +LRECVL+KKVKKFSLA+++Q
Sbjct: 1  MDEARAKPVCAEEALNLLNCVAQSPYDQDKCIRLLQNLRECVLNKKVKKFSLADQDQ 57

[Close]

BLAST of Pay0017546 vs. NCBI nr
Match: KAA0042698.1 (Cox19-like CHCH family protein [Cucumis melo var. makuwa] >TYK06102.1 Cox19-like CHCH family protein [Cucumis melo var. makuwa])

HSP 1 Score: 135.6 bits (340), Expect = 1.6e-28
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1  MDEPQPQPVCAQEALNLLNCVTESPFDQDKCYRLLHSLRECVLSKKVKKFSLAEEEQTKP 60
          MDEPQPQPVCAQEALNLLNCVTESPFDQDKCYRLLHSLRECVLSKKVKKFSLAEEEQTKP
Sbjct: 1  MDEPQPQPVCAQEALNLLNCVTESPFDQDKCYRLLHSLRECVLSKKVKKFSLAEEEQTKP 60

Query: 61 IVKKNS 67
          IVKKNS
Sbjct: 61 IVKKNS 66

[Close]

BLAST of Pay0017546 vs. NCBI nr
Match: KGN50036.1 (hypothetical protein Csa_000619 [Cucumis sativus])

HSP 1 Score: 132.5 bits (332), Expect = 1.3e-27
Identity = 63/66 (95.45%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1  MDEPQPQPVCAQEALNLLNCVTESPFDQDKCYRLLHSLRECVLSKKVKKFSLAEEEQTKP 60
          MDEPQPQPVCAQEALNLLNCVTESPFDQ+KCYRLLHSLRECVLSKKVKKFSLAEEEQTKP
Sbjct: 1  MDEPQPQPVCAQEALNLLNCVTESPFDQEKCYRLLHSLRECVLSKKVKKFSLAEEEQTKP 60

Query: 61 IVKKNS 67
          I+KKN+
Sbjct: 61 IIKKNA 66

[Close]

BLAST of Pay0017546 vs. NCBI nr
Match: KAG6606053.1 (hypothetical protein SDJN03_03370, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 107.5 bits (267), Expect = 4.6e-20
Identity = 52/66 (78.79%), Postives = 60/66 (90.91%), Query Frame = 0


Query: 1  MDEPQPQPVCAQEALNLLNCVTESPFDQDKCYRLLHSLRECVLSKKVKKFSLAEEEQTKP 60
          MD+ Q QPVCAQEAL+LLNCVT+SPFDQ+KCYRLLHSLRECVLSKKVKKFSLA+EE+ K 
Sbjct: 1  MDDAQAQPVCAQEALDLLNCVTDSPFDQEKCYRLLHSLRECVLSKKVKKFSLADEERAKR 60

Query: 61 IVKKNS 67
            KK++
Sbjct: 61 SGKKST 66

[Close]

BLAST of Pay0017546 vs. NCBI nr
Match: KAA8520919.1 (hypothetical protein F0562_011592 [Nyssa sinensis])

HSP 1 Score: 100.9 bits (250), Expect = 4.3e-18
Identity = 53/68 (77.94%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 1  MDEPQ-PQPVCAQEALNLLNCVTESPFDQDKCYRLLHSLRECVLSKKVKKFSLAEEE--Q 60
          MD+ Q PQPVCAQEALNLLNCVTESPFDQDKC RLLHSLR+CV SKKVKKFSLAE++  +
Sbjct: 1  MDQGQPPQPVCAQEALNLLNCVTESPFDQDKCLRLLHSLRDCVQSKKVKKFSLAEQKGGE 60

Query: 61 TKPIVKKN 66
            PI KK+
Sbjct: 61 ADPISKKH 68

[Close]

BLAST of Pay0017546 vs. NCBI nr
Match: KAG7017003.1 (hypothetical protein SDJN02_22114, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 99.4 bits (246), Expect = 1.3e-17
Identity = 49/59 (83.05%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 1  MDEPQPQPVCAQEALNLLNCVTESPFDQDKCYRLLHSLRECVLSKKVKKFSLAEEEQTK 60
          M EP+ QPVCAQEAL+LLNCVTESPFDQ KCYRLLHSLRECV+S   KKFSLA+EEQTK
Sbjct: 13 MGEPRSQPVCAQEALDLLNCVTESPFDQQKCYRLLHSLRECVIS---KKFSLADEEQTK 68

[Close]

BLAST of Pay0017546 vs. TAIR 10
Match: AT4G23760.1 (Cox19-like CHCH family protein )

HSP 1 Score: 84.3 bits (207), Expect = 3.9e-17
Identity = 38/56 (67.86%), Postives = 45/56 (80.36%), Query Frame = 0


Query: 1   MDEPQPQPVCAQEALNLLNCVTESPFDQDKCYRLLHSLRECVLSKKVKKFSLAEEE 57
           M++   QP+C QEAL LLNCV ESPFDQ+KC R L SLRECVLSKKVKKFS+  ++
Sbjct: 47  MEKQSTQPICGQEALQLLNCVAESPFDQEKCVRFLQSLRECVLSKKVKKFSIPSQD 102

The following BLAST results are available for this feature:

BLAST of Pay0017546 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0017546 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C4E2	7.7e-29	100.00	Cox19-like CHCH family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0KQS7	6.5e-28	95.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G151520 PE=4 SV=1	[more]
A0A5J4ZSA8	2.1e-18	77.94	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_011592 PE=4 SV=1	[more]
A0A7J7CJI7	4.4e-16	76.79	Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW16G00654 ...	[more]
A0A5N5NC68	5.7e-16	73.68	Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_004631 PE=4 SV=1	[more]

BLAST of Pay0017546 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042698.1	1.6e-28	100.00	Cox19-like CHCH family protein [Cucumis melo var. makuwa] >TYK06102.1 Cox19-like...	[more]
KGN50036.1	1.3e-27	95.45	hypothetical protein Csa_000619 [Cucumis sativus]	[more]
KAG6606053.1	4.6e-20	78.79	hypothetical protein SDJN03_03370, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA8520919.1	4.3e-18	77.94	hypothetical protein F0562_011592 [Nyssa sinensis]	[more]
KAG7017003.1	1.3e-17	83.05	hypothetical protein SDJN02_22114, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Pay0017546 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23760.1	3.9e-17	67.86	Cox19-like CHCH family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.287.1130	CytochromE C oxidase copper chaperone	coord: 5..65 e-value: 6.0E-6 score: 28.1
None	No IPR available	PANTHER	PTHR37750	COX19-LIKE CHCH FAMILY PROTEIN	coord: 1..59
None	No IPR available	PROSITE	PS51808	CHCH	coord: 7..49 score: 10.91888
IPR009069	Cysteine alpha-hairpin motif superfamily	SUPERFAMILY	47072	Cysteine alpha-hairpin motif	coord: 7..42

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0017546.1	Pay0017546.1	mRNA