Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCGCCTACATACATTCAAATTCAAACCCTAAAAACACAAAATTCCAAATCCTTCACGAAAAGAAAAACTTTCTTTTCCCTTCTTCTCTTTTTCTATGATTCCATTTCTTCACTTTCAAACCAATTTCTCCATCTCCACTCCACACCAATATGCAAACTCTCCACCATCCCTTACCCTCTCCTCGAGATATTCCTCTCAAGTCCGGCCGCCGCCCGCTCCAGCCAAAGAATTCTCTCCCAAATCTTGTCCCTTCCGTTGCCAAAATCATCAAATCCAAGCCGGAAATCATCCAGATCTCCCTCTCCGGCGACGCCAATAAGGAGAATCATCCGCCGGCAACAACGGTGAGTATTGAGTCATGTGATTTGTCTCTGGCGGATGAACTGAATGCGGTTAAGAGGAAGATGGAGAGATTGAGATTGGACGGTGAACGAACGGAGAAGATGTTGAGAGAGAGGGATTTGGTTTTGGAGTTACGGATGAAGGAACTGTTACAGAGAAGTCAGGAACAGAGAGATCTGGAAATGGAAGTTGATAGGTTATTTAGACTGAAGGAACTTAGATCGTACTGTATGGTAAATTTGCTAAACGTTTTTTTTTCTTTTGGTTAGTTTGAAGGTTCGATTCGTGTTTTATTTGCTGATATTTTCTTATGATTTAAATCAGAGGATTTCTCCGATTCGAAGTCTCAGAGAGAAAGAACGAGAAAAGATTTTCACCGATGCACAATTTCCGGTACGTTCCGATCTAGAATCTTTAAAGCTTATTTCTTGGTTCATCTTGTGAAATCAATCCACAATTCACTGATTTGTTTCAGGAATTTGAAATCGGCGATGGAGAAGAATCTGTTGGCGAAAACTCCTCGTTGGATTCTTCAGAATTCGTAACAGGTTTTTGAAATCGTTTCTAAACTTTTGTGGATTTGCCCTAATTTTCCGATCATTACTACATCTTGTTCGGGTTTTCAAAAGTAGAAATTAGAGAAGGAAATGGATGTAATACCTCATTATGATCTTCTTTACGCATAGATGGAAGCTTTTGAGTAGTTGTAATCAATGTGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCACTTCAATTAATGTTTGAAAATGAAGAAATTCCAAATCGTGTTGGTGAATTTTTCTCTCG
mRNA sequence
GGCGCCTACATACATTCAAATTCAAACCCTAAAAACACAAAATTCCAAATCCTTCACGAAAAGAAAAACTTTCTTTTCCCTTCTTCTCTTTTTCTATGATTCCATTTCTTCACTTTCAAACCAATTTCTCCATCTCCACTCCACACCAATATGCAAACTCTCCACCATCCCTTACCCTCTCCTCGAGATATTCCTCTCAAGTCCGGCCGCCGCCCGCTCCAGCCAAAGAATTCTCTCCCAAATCTTGTCCCTTCCGTTGCCAAAATCATCAAATCCAAGCCGGAAATCATCCAGATCTCCCTCTCCGGCGACGCCAATAAGGAGAATCATCCGCCGGCAACAACGGTGAGTATTGAGTCATGTGATTTGTCTCTGGCGGATGAACTGAATGCGGTTAAGAGGAAGATGGAGAGATTGAGATTGGACGGTGAACGAACGGAGAAGATGTTGAGAGAGAGGGATTTGGTTTTGGAGTTACGGATGAAGGAACTGTTACAGAGAAGTCAGGAACAGAGAGATCTGGAAATGGAAGTTGATAGGTTATTTAGACTGAAGGAACTTAGATCGTACTGTATGAGGATTTCTCCGATTCGAAGTCTCAGAGAGAAAGAACGAGAAAAGATTTTCACCGATGCACAATTTCCGGAATTTGAAATCGGCGATGGAGAAGAATCTGTTGGCGAAAACTCCTCGTTGGATTCTTCAGAATTCGTAACAGGTTTTTGAAATCGTTTCTAAACTTTTGTGGATTTGCCCTAATTTTCCGATCATTACTACATCTTGTTCGGGTTTTCAAAAGTAGAAATTAGAGAAGGAAATGGATGTAATACCTCATTATGATCTTCTTTACGCATAGATGGAAGCTTTTGAGTAGTTGTAATCAATGTGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCACTTCAATTAATGTTTGAAAATGAAGAAATTCCAAATCGTGTTGGTGAATTTTTCTCTCG
Coding sequence (CDS)
ATGCAAACTCTCCACCATCCCTTACCCTCTCCTCGAGATATTCCTCTCAAGTCCGGCCGCCGCCCGCTCCAGCCAAAGAATTCTCTCCCAAATCTTGTCCCTTCCGTTGCCAAAATCATCAAATCCAAGCCGGAAATCATCCAGATCTCCCTCTCCGGCGACGCCAATAAGGAGAATCATCCGCCGGCAACAACGGTGAGTATTGAGTCATGTGATTTGTCTCTGGCGGATGAACTGAATGCGGTTAAGAGGAAGATGGAGAGATTGAGATTGGACGGTGAACGAACGGAGAAGATGTTGAGAGAGAGGGATTTGGTTTTGGAGTTACGGATGAAGGAACTGTTACAGAGAAGTCAGGAACAGAGAGATCTGGAAATGGAAGTTGATAGGTTATTTAGACTGAAGGAACTTAGATCGTACTGTATGAGGATTTCTCCGATTCGAAGTCTCAGAGAGAAAGAACGAGAAAAGATTTTCACCGATGCACAATTTCCGGAATTTGAAATCGGCGATGGAGAAGAATCTGTTGGCGAAAACTCCTCGTTGGATTCTTCAGAATTCGTAACAGGTTTTTGA
Protein sequence
MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNLVPSVAKIIKSKPEIIQISLSGDANKENHPPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
Homology
BLAST of Pay0017285 vs. ExPASy TrEMBL
Match:
A0A5D3CEI7 (High mobility group B protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G00430 PE=4 SV=1)
HSP 1 Score: 359.4 bits (921), Expect = 9.4e-96
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
Query: 1 MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNLVPSVAKIIKSKPEIIQISLSGDANKENH 60
MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNLVPSVAKIIKSKPEIIQISLSGDANKENH
Sbjct: 1 MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNLVPSVAKIIKSKPEIIQISLSGDANKENH 60
Query: 61 PPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRSQE 120
PPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRSQE
Sbjct: 61 PPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRSQE 120
Query: 121 QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENS 180
QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENS
Sbjct: 121 QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENS 180
Query: 181 SLDSSEFVTGF 192
SLDSSEFVTGF
Sbjct: 181 SLDSSEFVTGF 191
BLAST of Pay0017285 vs. ExPASy TrEMBL
Match:
A0A1S3CJ78 (high mobility group B protein 6 OS=Cucumis melo OX=3656 GN=LOC103501469 PE=4 SV=1)
HSP 1 Score: 359.4 bits (921), Expect = 9.4e-96
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
Query: 1 MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNLVPSVAKIIKSKPEIIQISLSGDANKENH 60
MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNLVPSVAKIIKSKPEIIQISLSGDANKENH
Sbjct: 1 MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNLVPSVAKIIKSKPEIIQISLSGDANKENH 60
Query: 61 PPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRSQE 120
PPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRSQE
Sbjct: 61 PPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRSQE 120
Query: 121 QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENS 180
QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENS
Sbjct: 121 QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENS 180
Query: 181 SLDSSEFVTGF 192
SLDSSEFVTGF
Sbjct: 181 SLDSSEFVTGF 191
BLAST of Pay0017285 vs. ExPASy TrEMBL
Match:
A0A5A7SJQ2 (High mobility group B protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1220G00510 PE=4 SV=1)
HSP 1 Score: 356.7 bits (914), Expect = 6.1e-95
Identity = 190/191 (99.48%), Postives = 190/191 (99.48%), Query Frame = 0
Query: 1 MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNLVPSVAKIIKSKPEIIQISLSGDANKENH 60
MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPN VPSVAKIIKSKPEIIQISLSGDANKENH
Sbjct: 1 MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENH 60
Query: 61 PPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRSQE 120
PPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRSQE
Sbjct: 61 PPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRSQE 120
Query: 121 QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENS 180
QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENS
Sbjct: 121 QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENS 180
Query: 181 SLDSSEFVTGF 192
SLDSSEFVTGF
Sbjct: 181 SLDSSEFVTGF 191
BLAST of Pay0017285 vs. ExPASy TrEMBL
Match:
A0A0A0L063 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G334650 PE=4 SV=1)
HSP 1 Score: 352.1 bits (902), Expect = 1.5e-93
Identity = 187/191 (97.91%), Postives = 188/191 (98.43%), Query Frame = 0
Query: 1 MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNLVPSVAKIIKSKPEIIQISLSGDANKENH 60
MQTLHHPLP PRD+PLKSGRRPLQPKNSLPN VPSVAKIIKSKPEIIQISLSGDANKENH
Sbjct: 1 MQTLHHPLPPPRDLPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENH 60
Query: 61 PPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRSQE 120
PP TTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRSQE
Sbjct: 61 PPPTTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRSQE 120
Query: 121 QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENS 180
QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENS
Sbjct: 121 QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENS 180
Query: 181 SLDSSEFVTGF 192
SLDSSEFVTGF
Sbjct: 181 SLDSSEFVTGF 191
BLAST of Pay0017285 vs. ExPASy TrEMBL
Match:
A0A6J1ISM0 (high mobility group B protein 13-like OS=Cucurbita maxima OX=3661 GN=LOC111478322 PE=4 SV=1)
HSP 1 Score: 307.8 bits (787), Expect = 3.3e-80
Identity = 164/193 (84.97%), Postives = 177/193 (91.71%), Query Frame = 0
Query: 1 MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNLVPSVAKIIKSKPEIIQISLSGDANKENH 60
MQ LH PL +P D+PLKSGRRPLQPKNSLPN VP+VAK+IKSKPE IQISL DANKENH
Sbjct: 1 MQALHQPLATPHDLPLKSGRRPLQPKNSLPNPVPAVAKVIKSKPERIQISLPTDANKENH 60
Query: 61 PP--ATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRS 120
PP A S+ESCDLSLADELNAVKRK+ERLRL+ ERTE+ML+ERD++LELRMKELLQRS
Sbjct: 61 PPIHAKAASVESCDLSLADELNAVKRKLERLRLERERTEQMLKERDMILELRMKELLQRS 120
Query: 121 QEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGE 180
+EQRDLEMEVDRLFRLKELR YCMRISPIRSLREKEREKIF DAQFPE+EIGDGEESVGE
Sbjct: 121 KEQRDLEMEVDRLFRLKELRLYCMRISPIRSLREKEREKIFADAQFPEYEIGDGEESVGE 180
Query: 181 NSSLDSSEFVTGF 192
NSSLDSSEFVTGF
Sbjct: 181 NSSLDSSEFVTGF 193
BLAST of Pay0017285 vs. NCBI nr
Match:
XP_008463266.1 (PREDICTED: high mobility group B protein 6 [Cucumis melo] >TYK09760.1 high mobility group B protein 6 [Cucumis melo var. makuwa])
HSP 1 Score: 359.4 bits (921), Expect = 1.9e-95
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
Query: 1 MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNLVPSVAKIIKSKPEIIQISLSGDANKENH 60
MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNLVPSVAKIIKSKPEIIQISLSGDANKENH
Sbjct: 1 MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNLVPSVAKIIKSKPEIIQISLSGDANKENH 60
Query: 61 PPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRSQE 120
PPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRSQE
Sbjct: 61 PPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRSQE 120
Query: 121 QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENS 180
QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENS
Sbjct: 121 QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENS 180
Query: 181 SLDSSEFVTGF 192
SLDSSEFVTGF
Sbjct: 181 SLDSSEFVTGF 191
BLAST of Pay0017285 vs. NCBI nr
Match:
KAA0025412.1 (high mobility group B protein 6 [Cucumis melo var. makuwa])
HSP 1 Score: 356.7 bits (914), Expect = 1.3e-94
Identity = 190/191 (99.48%), Postives = 190/191 (99.48%), Query Frame = 0
Query: 1 MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNLVPSVAKIIKSKPEIIQISLSGDANKENH 60
MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPN VPSVAKIIKSKPEIIQISLSGDANKENH
Sbjct: 1 MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENH 60
Query: 61 PPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRSQE 120
PPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRSQE
Sbjct: 61 PPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRSQE 120
Query: 121 QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENS 180
QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENS
Sbjct: 121 QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENS 180
Query: 181 SLDSSEFVTGF 192
SLDSSEFVTGF
Sbjct: 181 SLDSSEFVTGF 191
BLAST of Pay0017285 vs. NCBI nr
Match:
XP_004142680.1 (high mobility group B protein 6 [Cucumis sativus] >KGN54454.1 hypothetical protein Csa_012022 [Cucumis sativus])
HSP 1 Score: 352.1 bits (902), Expect = 3.1e-93
Identity = 187/191 (97.91%), Postives = 188/191 (98.43%), Query Frame = 0
Query: 1 MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNLVPSVAKIIKSKPEIIQISLSGDANKENH 60
MQTLHHPLP PRD+PLKSGRRPLQPKNSLPN VPSVAKIIKSKPEIIQISLSGDANKENH
Sbjct: 1 MQTLHHPLPPPRDLPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENH 60
Query: 61 PPATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRSQE 120
PP TTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRSQE
Sbjct: 61 PPPTTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRSQE 120
Query: 121 QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENS 180
QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENS
Sbjct: 121 QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENS 180
Query: 181 SLDSSEFVTGF 192
SLDSSEFVTGF
Sbjct: 181 SLDSSEFVTGF 191
BLAST of Pay0017285 vs. NCBI nr
Match:
XP_038883293.1 (uncharacterized protein LOC120074285 [Benincasa hispida])
HSP 1 Score: 325.1 bits (832), Expect = 4.1e-85
Identity = 176/197 (89.34%), Postives = 182/197 (92.39%), Query Frame = 0
Query: 1 MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNLVPSVAKIIKSKPEIIQISLSGDANKENH 60
MQTLHHPL +P+D+PLKSGRRPLQPKNSLPN PSVAK IKSKPE IQISLSGDANKENH
Sbjct: 1 MQTLHHPLATPQDLPLKSGRRPLQPKNSLPNSGPSVAKFIKSKPERIQISLSGDANKENH 60
Query: 61 PP------ATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKEL 120
PP TT SIESCD SLADELNAVKRK+ERLRLDGERTE+MLRERDLVLELRMKEL
Sbjct: 61 PPIHATATTTTASIESCDSSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKEL 120
Query: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE
Sbjct: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
Query: 181 SVGENSSLDSSEFVTGF 192
SVGENSSLDS+ FVTGF
Sbjct: 181 SVGENSSLDSAGFVTGF 197
BLAST of Pay0017285 vs. NCBI nr
Match:
XP_022978293.1 (high mobility group B protein 13-like [Cucurbita maxima])
HSP 1 Score: 307.8 bits (787), Expect = 6.7e-80
Identity = 164/193 (84.97%), Postives = 177/193 (91.71%), Query Frame = 0
Query: 1 MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNLVPSVAKIIKSKPEIIQISLSGDANKENH 60
MQ LH PL +P D+PLKSGRRPLQPKNSLPN VP+VAK+IKSKPE IQISL DANKENH
Sbjct: 1 MQALHQPLATPHDLPLKSGRRPLQPKNSLPNPVPAVAKVIKSKPERIQISLPTDANKENH 60
Query: 61 PP--ATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRS 120
PP A S+ESCDLSLADELNAVKRK+ERLRL+ ERTE+ML+ERD++LELRMKELLQRS
Sbjct: 61 PPIHAKAASVESCDLSLADELNAVKRKLERLRLERERTEQMLKERDMILELRMKELLQRS 120
Query: 121 QEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGE 180
+EQRDLEMEVDRLFRLKELR YCMRISPIRSLREKEREKIF DAQFPE+EIGDGEESVGE
Sbjct: 121 KEQRDLEMEVDRLFRLKELRLYCMRISPIRSLREKEREKIFADAQFPEYEIGDGEESVGE 180
Query: 181 NSSLDSSEFVTGF 192
NSSLDSSEFVTGF
Sbjct: 181 NSSLDSSEFVTGF 193
BLAST of Pay0017285 vs. TAIR 10
Match:
AT5G01910.1 (unknown protein; Has 66 Blast hits to 66 proteins in 27 species: Archae - 0; Bacteria - 2; Metazoa - 18; Fungi - 7; Plants - 29; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )
HSP 1 Score: 100.9 bits (250), Expect = 1.2e-21
Identity = 72/159 (45.28%), Postives = 97/159 (61.01%), Query Frame = 0
Query: 18 SGRRPLQPKNSLPNLVPSVAKIIKSKPEIIQISLSGDANKENHPPATTVSIESCDLSLAD 77
SGR+ LQP+N + A +K K + + KEN T++ D SLA+
Sbjct: 4 SGRKALQPRN-IYQTPKEDAFFVKPK--------AAEKLKENLNLETSI-----DASLAE 63
Query: 78 ELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKEL 137
EL+A K+K+ERLR D E TEK+L+ERD ++L M LLQR + Q+ LE++VDRLFRLKEL
Sbjct: 64 ELSAFKKKLERLREDRESTEKLLKERDEAMDLHMSHLLQRGETQKSLEIQVDRLFRLKEL 123
Query: 138 RSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESV 177
+Y +ISPIRSLR KE+++ F E D E SV
Sbjct: 124 HAYSSKISPIRSLRAKEQQEKMRRFTFAGEEQPDEESSV 148
BLAST of Pay0017285 vs. TAIR 10
Match:
AT5G01910.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 98.6 bits (244), Expect = 5.8e-21
Identity = 66/140 (47.14%), Postives = 91/140 (65.00%), Query Frame = 0
Query: 18 SGRRPLQPKNSLPNLVPSVAKIIKSKPEIIQISLSGDANKENHPPATTVSIESCDLSLAD 77
SGR+ LQP+N + A +K K + + KEN T++ D SLA+
Sbjct: 4 SGRKALQPRN-IYQTPKEDAFFVKPK--------AAEKLKENLNLETSI-----DASLAE 63
Query: 78 ELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKEL 137
EL+A K+K+ERLR D E TEK+L+ERD ++L M LLQR + Q+ LE++VDRLFRLKEL
Sbjct: 64 ELSAFKKKLERLREDRESTEKLLKERDEAMDLHMSHLLQRGETQKSLEIQVDRLFRLKEL 123
Query: 138 RSYCMRISPIRSLREKEREK 158
+Y +ISPIRSLR KE+++
Sbjct: 124 HAYSSKISPIRSLRAKEQQE 129
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3CEI7 | 9.4e-96 | 100.00 | High mobility group B protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
| A0A1S3CJ78 | 9.4e-96 | 100.00 | high mobility group B protein 6 OS=Cucumis melo OX=3656 GN=LOC103501469 PE=4 SV=... | [more] |
| A0A5A7SJQ2 | 6.1e-95 | 99.48 | High mobility group B protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... | [more] |
| A0A0A0L063 | 1.5e-93 | 97.91 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G334650 PE=4 SV=1 | [more] |
| A0A6J1ISM0 | 3.3e-80 | 84.97 | high mobility group B protein 13-like OS=Cucurbita maxima OX=3661 GN=LOC11147832... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_008463266.1 | 1.9e-95 | 100.00 | PREDICTED: high mobility group B protein 6 [Cucumis melo] >TYK09760.1 high mobil... | [more] |
| KAA0025412.1 | 1.3e-94 | 99.48 | high mobility group B protein 6 [Cucumis melo var. makuwa] | [more] |
| XP_004142680.1 | 3.1e-93 | 97.91 | high mobility group B protein 6 [Cucumis sativus] >KGN54454.1 hypothetical prote... | [more] |
| XP_038883293.1 | 4.1e-85 | 89.34 | uncharacterized protein LOC120074285 [Benincasa hispida] | [more] |
| XP_022978293.1 | 6.7e-80 | 84.97 | high mobility group B protein 13-like [Cucurbita maxima] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G01910.1 | 1.2e-21 | 45.28 | unknown protein; Has 66 Blast hits to 66 proteins in 27 species: Archae - 0; Bac... | [more] |
| AT5G01910.2 | 5.8e-21 | 47.14 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
