Homology
BLAST of Pay0017270 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 105.9 bits (263), Expect = 6.8e-22
Identity = 55/120 (45.83%), Postives = 82/120 (68.33%), Query Frame = 0
Query: 4 KWVFVRKRNKNNEVTRYKARLVAQGFSQRPDIDYEETYSPVVDAITLRYLISLTICENLD 63
+WVF K N+ RYKARLVA+GF+Q+ IDYEET++PV + R+++SL I NL
Sbjct: 938 RWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLK 997
Query: 64 MHLMDVVTAYLYGSLENEIYMKIPKGFKILESYNSSSRELCSIKLQKSLYGLKQSGQIFY 123
+H MDV TA+L G+L+ EIYM++P+G + +S +C KL K++YGLKQ+ + ++
Sbjct: 998 VHQMDVKTAFLNGTLKEEIYMRLPQGI------SCNSDNVC--KLNKAIYGLKQAARCWF 1049
BLAST of Pay0017270 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 104.4 bits (259), Expect = 2.0e-21
Identity = 53/121 (43.80%), Postives = 83/121 (68.60%), Query Frame = 0
Query: 4 KWVFVRKRNKNNEVTRYKARLVAQGFSQRPDIDYEETYSPVVDAITLRYLISLTICENLD 63
KWVF K++ + ++ RYKARLV +GF Q+ ID++E +SPVV ++R ++SL +L+
Sbjct: 858 KWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLE 917
Query: 64 MHLMDVVTAYLYGSLENEIYMKIPKGFKILESYNSSSRELCSIKLQKSLYGLKQSGQIFY 123
+ +DV TA+L+G LE EIYM+ P+GF++ + ++ KL KSLYGLKQ+ + +Y
Sbjct: 918 VEQLDVKTAFLHGDLEEEIYMEQPEGFEV------AGKKHMVCKLNKSLYGLKQAPRQWY 972
Query: 124 M 125
M
Sbjct: 978 M 972
BLAST of Pay0017270 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 100.9 bits (250), Expect = 2.2e-20
Identity = 47/125 (37.60%), Postives = 81/125 (64.80%), Query Frame = 0
Query: 1 MGFKWVFVRKRNKNNEVTRYKARLVAQGFSQRPDIDYEETYSPVVDAITLRYLISLTICE 60
+G +W+F +K N + + RYKARLVA+G++QRP +DY ET+SPV+ + ++R ++ + +
Sbjct: 998 VGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDR 1057
Query: 61 NLDMHLMDVVTAYLYGSLENEIYMKIPKGFKILESYNSSSRELCSIKLQKSLYGLKQSGQ 120
+ + +DV A+L G+L +++YM P GF R KL+K+LYGLKQ+ +
Sbjct: 1058 SWPIRQLDVNNAFLQGTLTDDVYMSQPPGF------IDKDRPNYVCKLRKALYGLKQAPR 1116
Query: 121 IFYMD 126
+Y++
Sbjct: 1118 AWYVE 1116
BLAST of Pay0017270 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 99.8 bits (247), Expect = 4.9e-20
Identity = 46/125 (36.80%), Postives = 81/125 (64.80%), Query Frame = 0
Query: 1 MGFKWVFVRKRNKNNEVTRYKARLVAQGFSQRPDIDYEETYSPVVDAITLRYLISLTICE 60
+G +W+F +K N + + RYKARLVA+G++QRP +DY ET+SPV+ + ++R ++ + +
Sbjct: 981 VGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDR 1040
Query: 61 NLDMHLMDVVTAYLYGSLENEIYMKIPKGFKILESYNSSSRELCSIKLQKSLYGLKQSGQ 120
+ + +DV A+L G+L +E+YM P GF R +L+K++YGLKQ+ +
Sbjct: 1041 SWPIRQLDVNNAFLQGTLTDEVYMSQPPGFV------DKDRPDYVCRLRKAIYGLKQAPR 1099
Query: 121 IFYMD 126
+Y++
Sbjct: 1101 AWYVE 1099
BLAST of Pay0017270 vs. ExPASy Swiss-Prot
Match:
Q12490 (Transposon Ty1-BL Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY1B-BL PE=1 SV=1)
HSP 1 Score: 58.9 bits (141), Expect = 9.5e-08
Identity = 40/119 (33.61%), Postives = 61/119 (51.26%), Query Frame = 0
Query: 5 WVFVRKRNKNNEVTRYKARLVAQGFSQRPDIDYEETYSPVVDAITLRYLISLTICENLDM 64
++F RKR+ +KAR VA+G Q PD S V L +SL + N +
Sbjct: 1288 FIFNRKRDGT-----HKARFVARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYHI 1347
Query: 65 HLMDVVTAYLYGSLENEIYMKIPKGFKILESYNSSSRELCSIKLQKSLYGLKQSGQIFY 124
+D+ +AYLY ++ E+Y++ P + + I+L+KSLYGLKQSG +Y
Sbjct: 1348 TQLDISSAYLYADIKEELYIRPPPHLGMNDKL---------IRLKKSLYGLKQSGANWY 1392
BLAST of Pay0017270 vs. ExPASy TrEMBL
Match:
A0A438BTB5 (Copia protein OS=Vitis vinifera OX=29760 GN=GIP_44 PE=4 SV=1)
HSP 1 Score: 332.8 bits (852), Expect = 1.3e-87
Identity = 196/420 (46.67%), Postives = 227/420 (54.05%), Query Frame = 0
Query: 1 MGFKWVFVRKRNKNNEVTRYKARLVAQGFSQRPDIDYEETYSPVVDAITLRYLISLTICE 60
+G+KWVFVRKRN+NNE+ RYKARLVAQGFSQRP IDYEETYSPV+DAIT R+LISL + E
Sbjct: 148 VGYKWVFVRKRNENNEIIRYKARLVAQGFSQRPGIDYEETYSPVMDAITFRFLISLAVSE 207
Query: 61 NLDMHLMDVVTAYLYGSLENEIYMKIPKGFKILESYNSSSRELCSIKLQKSLYGLKQSGQ 120
LDM LMDV+TAYLYGS++N+IYMKIP+GFK+ ++ N+ R + SIKLQ+SLYGLKQSG+
Sbjct: 208 GLDMRLMDVITAYLYGSMDNDIYMKIPEGFKLPDANNTKPRSMYSIKLQRSLYGLKQSGR 267
Query: 121 I-----------------------------------FYMDKAHPLNIPMVVRSLDVKKDI 180
+ FYMDKAHPL+ PMV RSLDVKKD
Sbjct: 268 MWYNRLSEYLLKEGSSIFQMEFLVHQSTYIKKVLKRFYMDKAHPLSSPMVDRSLDVKKDP 327
Query: 181 FRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYT-------------- 240
FRP E +EELLGPEVPYLSAIGALMYLAN TRPDIAFSVNLLARY+
Sbjct: 328 FRPCEKDEELLGPEVPYLSAIGALMYLANCTRPDIAFSVNLLARYSSAPTRRHWNGIKHI 387
Query: 241 ------------------------------------------------------------ 256
Sbjct: 388 LRYLRGTTDMGLFYSRESKQQLLGYADAGYLSDPHKGRSQTGYVFNCNGTAISWRSVKQT 447
BLAST of Pay0017270 vs. ExPASy TrEMBL
Match:
Q949J4 (Putative copia-like polyprotein OS=Solanum lycopersicum OX=4081 PE=4 SV=1)
HSP 1 Score: 327.4 bits (838), Expect = 5.3e-86
Identity = 185/361 (51.25%), Postives = 213/361 (59.00%), Query Frame = 0
Query: 1 MGFKWVFVRKRNKNNEVTRYKARLVAQGFSQRPDIDYEETYSPVVDAITLRYLISLTICE 60
+G+KW+FVRKRN+ EV RYKARLVAQGFSQRP IDY ETYSPVVDAIT RYLI+L + E
Sbjct: 413 VGYKWIFVRKRNEKGEVMRYKARLVAQGFSQRPGIDYMETYSPVVDAITFRYLINLAVYE 472
Query: 61 NLDMHLMDVVTAYLYGSLENEIYMKIPKGFKILESYNSSSRELCSIKLQKSLYGLKQSGQ 120
L+M LMDVVTAYLYGSL++ I+MKIP+ FK+ E+Y SRE CSIKLQKSLYGLKQSG+
Sbjct: 473 KLEMRLMDVVTAYLYGSLDHNIFMKIPEAFKVPETY-KDSRETCSIKLQKSLYGLKQSGR 532
Query: 121 I----------------------------------------------------------- 180
+
Sbjct: 533 MWYNRLSEYLLKKGYKNDSICPCIFIKRLGSEFVIIAVYVDDLNIIGTRKELLEAVECLK 592
Query: 181 ----------------------------------------FYMDKAHPLNIPMVVRSLDV 240
FYMD +HPL+ PMVVRSLD+
Sbjct: 593 REFEMKDLGKTKFCLGLQIENLSNGILVHQSTYTEKILKRFYMDNSHPLSTPMVVRSLDI 652
Query: 241 KKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARY-------TQIK 256
D FRP+E++EELLG E PYLSAIGALMYL NNTRPDI F+ Y Q+K
Sbjct: 653 NTDPFRPQENDEELLGDETPYLSAIGALMYLVNNTRPDICFANIPTTMYEDNAACIAQLK 712
BLAST of Pay0017270 vs. ExPASy TrEMBL
Match:
A0A2N9J4G7 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59221 PE=4 SV=1)
HSP 1 Score: 314.3 bits (804), Expect = 4.6e-82
Identity = 198/484 (40.91%), Postives = 231/484 (47.73%), Query Frame = 0
Query: 1 MGFKWVFVRKRNKNNEVTRYKARLVAQGFSQRPDIDYEETYSPVVDAITLRYLISLTICE 60
+G+KWVFVRKRN+ NE+ RYKARLVAQGFSQRP IDYEETYSPV+DAIT R+LISL + E
Sbjct: 298 VGYKWVFVRKRNEKNEIIRYKARLVAQGFSQRPGIDYEETYSPVMDAITFRFLISLVVTE 357
Query: 61 NLDMHLMDVVTAYLYGSLENEIYMKIPKGFKILESYNSSSRELCSIKLQKSLYGLKQSGQ 120
NLDM LMDVVTAYLYGSL+N+IYMKIP+G+K+ E+YNS SR + SIKLQ+SLYGLKQSG+
Sbjct: 358 NLDMRLMDVVTAYLYGSLDNDIYMKIPEGYKMPEAYNSKSRNMYSIKLQRSLYGLKQSGR 417
Query: 121 I----------------------------------------------------------- 180
+
Sbjct: 418 MWYNRLSEYLLKEGFENNPICPCVFIKKSESGFAIVAVYVDDLNLVGTPEELTKTADYLK 477
Query: 181 ----------------------------------------FYMDKAHPLNIPMVVRSLDV 240
F+MDKAHPL+ PMVVRSLDV
Sbjct: 478 NEFEMKDLGKTKFCLGLQIEHLPDGILIHQSTYIEKVLKHFHMDKAHPLSTPMVVRSLDV 537
Query: 241 KKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARY----------- 256
KKD FRP+E EE LGPEVPYLSAIGALMYLAN TRPDIAFSVNLLARY
Sbjct: 538 KKDPFRPQEVGEETLGPEVPYLSAIGALMYLANCTRPDIAFSVNLLARYSSAPTLRHWNG 597
BLAST of Pay0017270 vs. ExPASy TrEMBL
Match:
A0A2N9FK49 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15524 PE=4 SV=1)
HSP 1 Score: 314.3 bits (804), Expect = 4.6e-82
Identity = 198/484 (40.91%), Postives = 231/484 (47.73%), Query Frame = 0
Query: 1 MGFKWVFVRKRNKNNEVTRYKARLVAQGFSQRPDIDYEETYSPVVDAITLRYLISLTICE 60
+G+KWVFVRKRN+ NE+ RYKARLVAQGFSQRP IDYEETYSPV+DAIT R+LISL + E
Sbjct: 232 VGYKWVFVRKRNEKNEIIRYKARLVAQGFSQRPGIDYEETYSPVMDAITFRFLISLVVTE 291
Query: 61 NLDMHLMDVVTAYLYGSLENEIYMKIPKGFKILESYNSSSRELCSIKLQKSLYGLKQSGQ 120
NLDM LMDVVTAYLYGSL+N+IYMKIP+G+K+ E+YNS SR + SIKLQ+SLYGLKQSG+
Sbjct: 292 NLDMRLMDVVTAYLYGSLDNDIYMKIPEGYKMPEAYNSKSRNMYSIKLQRSLYGLKQSGR 351
Query: 121 I----------------------------------------------------------- 180
+
Sbjct: 352 MWYNRLSEYLLKEGFENNPICPCVFIKKSESGFAIVAVYVDDLNLVGTPEKLTKTADYLN 411
Query: 181 ----------------------------------------FYMDKAHPLNIPMVVRSLDV 240
F+MDKAHPL+ PMVVRSLDV
Sbjct: 412 NEFEMKDLGKTKFCLGLQIEHLPDGILIHQSTYIEKVLKHFHMDKAHPLSTPMVVRSLDV 471
Query: 241 KKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARY----------- 256
KKD FRP+E EE LGPEVPYLSAIGALMYLAN TRPDIAFSVNLLARY
Sbjct: 472 KKDPFRPQEVGEETLGPEVPYLSAIGALMYLANCTRPDIAFSVNLLARYSSAPTLRHWNG 531
BLAST of Pay0017270 vs. ExPASy TrEMBL
Match:
A0A2N9I099 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45690 PE=4 SV=1)
HSP 1 Score: 314.3 bits (804), Expect = 4.6e-82
Identity = 198/484 (40.91%), Postives = 231/484 (47.73%), Query Frame = 0
Query: 1 MGFKWVFVRKRNKNNEVTRYKARLVAQGFSQRPDIDYEETYSPVVDAITLRYLISLTICE 60
+G+KWVFVRKRN+ NE+ RYKARLVAQGFSQRP IDYEETYSPV+DAIT R+LISL + E
Sbjct: 309 VGYKWVFVRKRNEKNEIIRYKARLVAQGFSQRPGIDYEETYSPVMDAITFRFLISLVVTE 368
Query: 61 NLDMHLMDVVTAYLYGSLENEIYMKIPKGFKILESYNSSSRELCSIKLQKSLYGLKQSGQ 120
NLDM LMDVVTAYLYGSL+N+IYMKIP+G+K+ E+YNS SR + SIKLQ+SLYGLKQSG+
Sbjct: 369 NLDMRLMDVVTAYLYGSLDNDIYMKIPEGYKMPEAYNSKSRNMYSIKLQRSLYGLKQSGR 428
Query: 121 I----------------------------------------------------------- 180
+
Sbjct: 429 MWYNRLSEYLLKEGFENNPICPCVFIKKSESGFAIVAVYVDDLNLVGTPEELTKTADYLK 488
Query: 181 ----------------------------------------FYMDKAHPLNIPMVVRSLDV 240
F+MDKAHPL+ PMVVRSLDV
Sbjct: 489 NEFEMKDLGKTKFCLGLQIEHLPDGILIHQSTYIEKVLKHFHMDKAHPLSTPMVVRSLDV 548
Query: 241 KKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARY----------- 256
KKD FRP+E EE LGPEVPYLSAIGALMYLAN TRPDIAFSVNLLARY
Sbjct: 549 KKDPFRPQEVGEETLGPEVPYLSAIGALMYLANCTRPDIAFSVNLLARYSSAPTLRHWNG 608
BLAST of Pay0017270 vs. NCBI nr
Match:
RVW14192.1 (Copia protein [Vitis vinifera])
HSP 1 Score: 332.8 bits (852), Expect = 2.6e-87
Identity = 196/420 (46.67%), Postives = 227/420 (54.05%), Query Frame = 0
Query: 1 MGFKWVFVRKRNKNNEVTRYKARLVAQGFSQRPDIDYEETYSPVVDAITLRYLISLTICE 60
+G+KWVFVRKRN+NNE+ RYKARLVAQGFSQRP IDYEETYSPV+DAIT R+LISL + E
Sbjct: 148 VGYKWVFVRKRNENNEIIRYKARLVAQGFSQRPGIDYEETYSPVMDAITFRFLISLAVSE 207
Query: 61 NLDMHLMDVVTAYLYGSLENEIYMKIPKGFKILESYNSSSRELCSIKLQKSLYGLKQSGQ 120
LDM LMDV+TAYLYGS++N+IYMKIP+GFK+ ++ N+ R + SIKLQ+SLYGLKQSG+
Sbjct: 208 GLDMRLMDVITAYLYGSMDNDIYMKIPEGFKLPDANNTKPRSMYSIKLQRSLYGLKQSGR 267
Query: 121 I-----------------------------------FYMDKAHPLNIPMVVRSLDVKKDI 180
+ FYMDKAHPL+ PMV RSLDVKKD
Sbjct: 268 MWYNRLSEYLLKEGSSIFQMEFLVHQSTYIKKVLKRFYMDKAHPLSSPMVDRSLDVKKDP 327
Query: 181 FRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYT-------------- 240
FRP E +EELLGPEVPYLSAIGALMYLAN TRPDIAFSVNLLARY+
Sbjct: 328 FRPCEKDEELLGPEVPYLSAIGALMYLANCTRPDIAFSVNLLARYSSAPTRRHWNGIKHI 387
Query: 241 ------------------------------------------------------------ 256
Sbjct: 388 LRYLRGTTDMGLFYSRESKQQLLGYADAGYLSDPHKGRSQTGYVFNCNGTAISWRSVKQT 447
BLAST of Pay0017270 vs. NCBI nr
Match:
AAK84483.1 (putative copia-like polyprotein [Solanum lycopersicum])
HSP 1 Score: 327.4 bits (838), Expect = 1.1e-85
Identity = 185/361 (51.25%), Postives = 213/361 (59.00%), Query Frame = 0
Query: 1 MGFKWVFVRKRNKNNEVTRYKARLVAQGFSQRPDIDYEETYSPVVDAITLRYLISLTICE 60
+G+KW+FVRKRN+ EV RYKARLVAQGFSQRP IDY ETYSPVVDAIT RYLI+L + E
Sbjct: 413 VGYKWIFVRKRNEKGEVMRYKARLVAQGFSQRPGIDYMETYSPVVDAITFRYLINLAVYE 472
Query: 61 NLDMHLMDVVTAYLYGSLENEIYMKIPKGFKILESYNSSSRELCSIKLQKSLYGLKQSGQ 120
L+M LMDVVTAYLYGSL++ I+MKIP+ FK+ E+Y SRE CSIKLQKSLYGLKQSG+
Sbjct: 473 KLEMRLMDVVTAYLYGSLDHNIFMKIPEAFKVPETY-KDSRETCSIKLQKSLYGLKQSGR 532
Query: 121 I----------------------------------------------------------- 180
+
Sbjct: 533 MWYNRLSEYLLKKGYKNDSICPCIFIKRLGSEFVIIAVYVDDLNIIGTRKELLEAVECLK 592
Query: 181 ----------------------------------------FYMDKAHPLNIPMVVRSLDV 240
FYMD +HPL+ PMVVRSLD+
Sbjct: 593 REFEMKDLGKTKFCLGLQIENLSNGILVHQSTYTEKILKRFYMDNSHPLSTPMVVRSLDI 652
Query: 241 KKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARY-------TQIK 256
D FRP+E++EELLG E PYLSAIGALMYL NNTRPDI F+ Y Q+K
Sbjct: 653 NTDPFRPQENDEELLGDETPYLSAIGALMYLVNNTRPDICFANIPTTMYEDNAACIAQLK 712
BLAST of Pay0017270 vs. NCBI nr
Match:
RVX16158.1 (Copia protein [Vitis vinifera])
HSP 1 Score: 310.8 bits (795), Expect = 1.1e-80
Identity = 197/484 (40.70%), Postives = 228/484 (47.11%), Query Frame = 0
Query: 1 MGFKWVFVRKRNKNNEVTRYKARLVAQGFSQRPDIDYEETYSPVVDAITLRYLISLTICE 60
+G+KWVFVRKRN+NNE+ RYKARLVAQGFSQRP IDYEETYSPV+DAIT R+LISL + E
Sbjct: 595 VGYKWVFVRKRNENNEIIRYKARLVAQGFSQRPGIDYEETYSPVMDAITFRFLISLAVSE 654
Query: 61 NLDMHLMDVVTAYLYGSLENEIYMKIPKGFKILESYNSSSRELCSIKLQKSLYGLKQSGQ 120
LDM LMDV+TAYLYGS++N+IYMKIP+GFK+ ++ N+ R + SIKLQ+SLYGLKQSG+
Sbjct: 655 GLDMRLMDVITAYLYGSMDNDIYMKIPEGFKLPDANNTKPRSMYSIKLQRSLYGLKQSGR 714
Query: 121 I----------------------------------------------------------- 180
+
Sbjct: 715 MWYNRLSEYLLKKGYVNNPICPCIFIKKSETGFAIIAVYVDDLNLVGTPEELTRTTNYLK 774
Query: 181 ----------------------------------------FYMDKAHPLNIPMVVRSLDV 240
FYMDKAHPL+ PMVVRSLDV
Sbjct: 775 KEFEMKDLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKCFYMDKAHPLSSPMVVRSLDV 834
Query: 241 KKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYT---------- 256
KKD FRP E +EELLGPEVPYLSAIGALMYLAN TRPDIAFSVNLLARY+
Sbjct: 835 KKDPFRPCEKDEELLGPEVPYLSAIGALMYLANCTRPDIAFSVNLLARYSSTPTRRHWNG 894
BLAST of Pay0017270 vs. NCBI nr
Match:
RVW13569.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 310.8 bits (795), Expect = 1.1e-80
Identity = 197/484 (40.70%), Postives = 228/484 (47.11%), Query Frame = 0
Query: 1 MGFKWVFVRKRNKNNEVTRYKARLVAQGFSQRPDIDYEETYSPVVDAITLRYLISLTICE 60
+G+KWVFVRKRN+NNE+ RYKARLVAQGFSQRP IDYEETYSPV+DAIT R+LISL + E
Sbjct: 638 VGYKWVFVRKRNENNEIIRYKARLVAQGFSQRPGIDYEETYSPVMDAITFRFLISLAVSE 697
Query: 61 NLDMHLMDVVTAYLYGSLENEIYMKIPKGFKILESYNSSSRELCSIKLQKSLYGLKQSGQ 120
LDM LMDV+TAYLYGS++N+IYMKIP+GFK+ ++ N+ R + SIKLQ+SLYGLKQSG+
Sbjct: 698 GLDMRLMDVITAYLYGSMDNDIYMKIPEGFKLPDANNTKPRSMYSIKLQRSLYGLKQSGR 757
Query: 121 I----------------------------------------------------------- 180
+
Sbjct: 758 MWYNRLSEYLLKEGYVNNPICPCIFIKKSETGFAIIAVYVDDLNLVGTPEELTRTTNYLK 817
Query: 181 ----------------------------------------FYMDKAHPLNIPMVVRSLDV 240
FYMDKAHPL+ PMVVRSLDV
Sbjct: 818 KEFEMKDLGKTKFCLSLQIEHFPNGVLVHQSTYIKKVLKRFYMDKAHPLSSPMVVRSLDV 877
Query: 241 KKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYT---------- 256
KKD FRP E +EELLGPEVPYLSAIGALMYLAN TRPDIAFSVNLLARY+
Sbjct: 878 KKDPFRPCEKDEELLGPEVPYLSAIGALMYLANCTRPDIAFSVNLLARYSSAPTRRHWNG 937
BLAST of Pay0017270 vs. NCBI nr
Match:
RVW59049.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 310.8 bits (795), Expect = 1.1e-80
Identity = 197/484 (40.70%), Postives = 228/484 (47.11%), Query Frame = 0
Query: 1 MGFKWVFVRKRNKNNEVTRYKARLVAQGFSQRPDIDYEETYSPVVDAITLRYLISLTICE 60
+G+KWVFVRKRN+NNE+ RYKARLVAQGFSQRP IDYEETYSPV+DAIT R+LISL + E
Sbjct: 582 VGYKWVFVRKRNENNEIIRYKARLVAQGFSQRPGIDYEETYSPVMDAITFRFLISLAVSE 641
Query: 61 NLDMHLMDVVTAYLYGSLENEIYMKIPKGFKILESYNSSSRELCSIKLQKSLYGLKQSGQ 120
LDM LMDV+TAYLYGS++N+IYMKIP+GFK+ ++ N+ R + SIKLQ+SLYGLKQSG+
Sbjct: 642 GLDMRLMDVITAYLYGSMDNDIYMKIPEGFKLPDANNTKPRSMYSIKLQRSLYGLKQSGR 701
Query: 121 I----------------------------------------------------------- 180
+
Sbjct: 702 MWYNRLSEYLLKEGYVNNPICPCIFIKKSETGFAIIAVYVDDLNLVGTPEELTRTTNYLK 761
Query: 181 ----------------------------------------FYMDKAHPLNIPMVVRSLDV 240
FYMDKAHPL+ PMVVRSLDV
Sbjct: 762 KEFEMKDLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKRFYMDKAHPLSSPMVVRSLDV 821
Query: 241 KKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYT---------- 256
KKD FRP E +EELLGPEVPYLSAIGALMYLAN TRPDIAFSVNLLARY+
Sbjct: 822 KKDPFRPCEKDEELLGPEVPYLSAIGALMYLANCTRPDIAFSVNLLARYSSAPTRRHWNG 881
BLAST of Pay0017270 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 99.8 bits (247), Expect = 3.5e-21
Identity = 46/124 (37.10%), Postives = 81/124 (65.32%), Query Frame = 0
Query: 1 MGFKWVFVRKRNKNNEVTRYKARLVAQGFSQRPDIDYEETYSPVVDAITLRYLISLTICE 60
+G KWV+ K N + + RYKARLVA+G++Q+ ID+ ET+SPV +++ +++++
Sbjct: 127 IGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIY 186
Query: 61 NLDMHLMDVVTAYLYGSLENEIYMKIPKGFKILESYNSSSRELCSIKLQKSLYGLKQSGQ 120
N +H +D+ A+L G L+ EIYMK+P G+ + + +C +K KS+YGLKQ+ +
Sbjct: 187 NFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLK--KSIYGLKQASR 246
Query: 121 IFYM 125
+++
Sbjct: 247 QWFL 248
BLAST of Pay0017270 vs. TAIR 10
Match:
ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )
HSP 1 Score: 54.3 bits (129), Expect = 1.7e-07
Identity = 26/56 (46.43%), Postives = 37/56 (66.07%), Query Frame = 0
Query: 1 MGFKWVFVRKRNKNNEVTRYKARLVAQGFSQRPDIDYEETYSPVVDAITLRYLISL 57
+G KWVF K + + + R KARLVA+GF Q I + ETYSPVV T+R ++++
Sbjct: 69 LGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNV 124
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P04146 | 6.8e-22 | 45.83 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
P10978 | 2.0e-21 | 43.80 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
Q94HW2 | 2.2e-20 | 37.60 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 4.9e-20 | 36.80 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Q12490 | 9.5e-08 | 33.61 | Transposon Ty1-BL Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 2... | [more] |
Match Name | E-value | Identity | Description | |
A0A438BTB5 | 1.3e-87 | 46.67 | Copia protein OS=Vitis vinifera OX=29760 GN=GIP_44 PE=4 SV=1 | [more] |
Q949J4 | 5.3e-86 | 51.25 | Putative copia-like polyprotein OS=Solanum lycopersicum OX=4081 PE=4 SV=1 | [more] |
A0A2N9J4G7 | 4.6e-82 | 40.91 | Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatic... | [more] |
A0A2N9FK49 | 4.6e-82 | 40.91 | Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatic... | [more] |
A0A2N9I099 | 4.6e-82 | 40.91 | Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatic... | [more] |
Match Name | E-value | Identity | Description | |
RVW14192.1 | 2.6e-87 | 46.67 | Copia protein [Vitis vinifera] | [more] |
AAK84483.1 | 1.1e-85 | 51.25 | putative copia-like polyprotein [Solanum lycopersicum] | [more] |
RVX16158.1 | 1.1e-80 | 40.70 | Copia protein [Vitis vinifera] | [more] |
RVW13569.1 | 1.1e-80 | 40.70 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
RVW59049.1 | 1.1e-80 | 40.70 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
Match Name | E-value | Identity | Description | |
AT4G23160.1 | 3.5e-21 | 37.10 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |
ATMG00820.1 | 1.7e-07 | 46.43 | Reverse transcriptase (RNA-dependent DNA polymerase) | [more] |