Pay0017264 (gene) Melon (Payzawat) v1

Overview


Name	Pay0017264
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	DNA-directed RNA polymerase
Location	chr09: 1707277 .. 1717884 (-)
RNA-Seq Expression	Pay0017264
Synteny	Pay0017264

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTCCACGTCTATGTGGAAGACCATTGCAAAGCGAGGTATTTGTAGGAACCGGCAGTTTCATCCTGATTGGCGTTGCTTTTCCCGCTTCAATGGCGTTCTGGGTCGTCCTAACGAGTCTTTATTTCGCGATAAATTGATTTCTGGTAATCTTGTTCCTAGTTCACTTCCGAAGTTTGGGTTTTTTCAAATGGGTGTTGGTCGAAATCAAATTTTGTCTCAGGAAGATTACTATAGAAGCAGATTCTGTTTTGGGTCTATGGGAGCTCGAATTGGGTTAAATGGGTTGTGCCCAAAAGGATATTCTAGTGTTGCTGAGGCGGTTTCTTCAACAGATGTGGACGAAGATGCATCTCTTGACGGTGAAGTTCAGGAGTTATTGCAAGAGATGAGCAAAGAAGAGACGAGGCTGAAAACGGTGAAGGGAATGCCACATTCGAAGTATCTAATGCTGAGGAGGAGGCAGGTGACCGTAGAGGCTGAGGCGTGGGAAAAGGCAGTGAAGGAGTACAAGGAGCTATTAGAGGACATGTGTAAGCAGAAGTTAGCACCTAATTTGCCGTACGTAAAGTCCTTGTTCCTTGGCTGGTTCGAGCCTTTTCAAGAGGCTATAAATAAAGAGCAAGAATTAATCCAGAAAGGGAAGAAACCTCGAGCTCCATATGCTCCTTATTTTGTTCAATTACCTGCAGATAAGATGTCAGTAATCACAATGCATAAGTTGATGGGGATGTTGATGAAGGGATGTGAACACGGTAATATCAAGGTTGTGGTGGCTGCTTGTGCAATAGGAGATGCTATTGAACAGGAGGTATGTCGGTTTTGTGAATGTAGACCCTCTGTCAGGTCTCTAGAGAGTTTAATGTACTTTCTGGTTTGTTTGTTAGATCACTGGAAGTAGCTCGAAGATAGATATGATTTAGAAAATAATTGAAGTAAGCTAAGAAGGGAACCTCCTCCATTTAATTGAATTAGAGTTGGGAGAAAAGGTGATTCTTCCTGTGTTGTTCTGTACTGGTTGCAATTTCTTTGTTACTTTTTAAGGTTTTACGTTATTATTTTCAAGCTCCCATTTTTTTGTATAATGGCTTAAGCTGCATTAATTGAAGCAGTATTTTTTGGGATTTGTATTGTGCCTAGGTGCAATATGGGAGTTTTTGACTTTTAACTTGGGTCTCAACATGAATTTTGTTCCACATTCAATTGTAAGTTTGCAACCATAATGTTGCTTAATCATGTCAGGTAAGAATTCACAAGTTCTTGGAGAAAAAGAAAGAGAAAAAGCACAACAAAAATAATGAGAACAATTACCAGCCTGATTCTCAAGTGAAGGAACAAGAGAGGTTAAGGAAAACAGTGGCCAACTTGATTAAAAAGAAAAAGCATCAGGCTGTAGGACAGATAGCGAAGGGAACCGATGATTCAAGACCATGGGGCAGGGAAGCCAAAGCAAAGGTCTGGGTCATCTTTTCTATATACACTTGAAAAACAATGGTTGCATGTCAGCAAAATTTCTAAAATACTTGGTGTTTTTAGGTTGGGGCCCGTCTAATTGAGCTGTTGATACAAACAGCTTACATACAACCTCCTGCTGATCAGTTGGCCGATGGTCCACCTGATATTCGCCCTGCATTTTGGCACTCATTGAAAACTGTGGTGACAGAGTAAGTCATTCATTTATATCAATCAGTCAGTCTATAAGTTCCCCTGGTTTCTTCCTTTGTACATTAAATCTTCTGATATATAAAATTGTTTCTTATAATATGTTTTGCTTGCTTGAACTTATTATTTTGACACTTCTATCAGTAATTCCGTCGGGAGACTTGGTGTCATTGAATGTGACCCTTTAGTCATCAAAGGCTTAGACCGGACTGTAAGTAAAAACTATCCATCTTGTTACTGGAAAATTGGATTGTGTCCCTTTCTTTTGCACTTCACTGCTGGACACTACTAATGCCAACATCACATTTCTTTTTGCAGTTCTCTAACTTGTTTGTTTGGTAGAAATAGCTTCATGATGTAACTGCATTTGGAAAGAATTAGTTAGTTTGGTCCAAGTTCTTTGTCAGTTTTTGATATCATTGGAGTCCTGCATTATGAACATCCCACGGAATTTCTTGCTGCATCTTTTCTTGCTATATGTTTTATGGTTGACGTGTTCTTTTTCTCAAACAGGCAAGACAAATCGTGATTCCCTATATGCCAATGTTGATGCCTCCAGTCAAATGGAGAGGGTATGCTATTTCACTTGGCATTTGGCTTCAATCTATTTTTCAAGTCACTTTCTTGTTAAGATCAATTTCCTATTAGATTTAATACTCTAGAGCAGAGCAGAGCAAAGCTGAGAGCTTGAGATCTTGAACTGGGTTGAAATTATGGAAGCAGTATTTTCATATCTTATGAGAATTAGTACTCTTGAACAAACGTCACGTATCCAGGCATCTTGATTGAGCTCTTTTAAGTGGGTGGAGATATGAAAGCAATGATGTCCTGATCTTTGGAAAGGTCAATGAGAGATGCACAACTAAGAAAAATGAGAAACTTGAGATGAGTAGACCAAGAAGAACACAAGAAAATGTCCTTCCACTCTAACCAATCTGTAGGAGATATTTAGCTCACAGTTTCTATAATTTTGGGCGTATGTCCTATCCAGGAAAAATGAATCTATGAAAACCTAGGTTTGTGTGGTATGTGTTTGGGTTGTGCAAGAGTAATAAGTCATAAAATTCTTACCTCGCGTTACTTGTGTTTGGTTGTAAGTTTATGATGAGTAAAAATAACCACATAGTTTAAAGGGTGTTTTTGTCAGCCTAGGATCATTAGTAAAACCACATTTTTTCTTCTCAAGGATATTTCATGTAACATGTCCATAATTTTTGCACTATTATTTCTGTAGAATTGGTATTTGCTGACTAATAAATAAGATTGGCATAAAATGCTGTTTATGCATTGCCAATATCTCTAGTTTTGAATCTCTCTGGCAAATTTCGACAATAAGCTTTCGCACCTGCGTTTTTTTCCCTTTTGGAGACCAATATTTTCCTTTTTAGCATAAGTTTGTTTTCCTCCTGTCACAGCTATGACAAAGGTGGACACATCCTCTTGCCATCGTTTGCCATGCGCACTCATGGAGCCAAACAACAACGTGATGCGTTTAAGAGGACCCCAAAGGAACAATTAACTCCAGTATTTCAGGTTTGAGATATTTAATTATTATAATTTTATATATCTTTGTGTGTGTGTGTGTGTGTGTTCACCACTATTTGAATTACTCAGCTAGAAGTAAGCTTGTTGAATCTTTATATTCTGCATAAACTGAGGCATGTTATGCTTTTCCTTCTTTTCCAGGCCCTAGACACACTTGGAAATACCAAATGGAGAATAAATAAAAGGATACTCGGTGTTGTGGAAAGAATATGGAGCAGTGGAGGGGACCTTGCTGGTCTAGTGAATCGGGATGATGTAAGTGGCTTTATGTCATCATTTTTCTTGCAACTACTTTTGATTCTAATATTACTTTGGTTTTTCCCTTTCCAGGTTCCATTGCCAGAAAAACCTGATACTGAAGATGAAACGCTAATAAAAAAGTGGAAATGGGAAATCAGATCTGTGAAGAAAGAAAATATGGAGAGGCATTCACAACGTTGTGACATAGAGCTTAAACTTGCTGTATGGTTTCACTTGTTGCAACAATTATATCTTTTCTAATTGGTTGTATTTGTATAACCACTTCGTTTAATTCTTCTTTTGATGGTGGAACAGGTAGCACGCAACATGAAGGATGAGGAAGGTTTTTACTATCCCCATAACGTAGACTTTCGAGGCCGTGCATATCCTATGCATCCACACTTGAATCATCTTGGTTCAGATCTCTGCCGAGGTATATTGGAGTTTGCAGAAGGTCGCCCACTCAGGAAGTCTGGCCTAAGTTGGCTGAAGATTCACTTGGCAAATCTTTTTGCTGGGGGCGTGGATAAATTATCTCATGATGGTCGAATGACATTTGTTGAGAATCATTTAGAAGATATATTTGACTCTGCTGACAAACCACTTGGAGGAAGACGTTGGTGGTTGAATGCTGAGGATCCTTTTCAGTTTTTAGCAGGATGCATGAATCTTACTGAAGCTTTGAGAAGCTCTTCTCCCGAAACATATATTTCACATATCCCCATACACCAGGTATTCACATATTGACACCTATAATTTTTTTCCAACTTTGTCAAAGAAGGAAAAGGTTCCTATCCACTGGAGAGCTTATATTATAGCTAGAATTGGTATTATTATGAAAATATTTATAACTGGGAAAAAAGGCTGGAGGGAATAGACTAATAGGAGCTCAGCTCAACAAGTGTACTTTTCTTTCTTCTCCATCCAATCTCTAGGACTATTTGTTGTTCTACTTATACTTAAATTCCTCCTTGTGTGTGTATTTGGCATCTAATACGCTTTAACCATTAGAGATATTCTTTGACCTTTTCTCTATACCTTAACCCGCTCATGTGTAGTGTTGTTTTGGTCTTTTTTTCGTCACTAGAGTTAATTCTTCATTGTACTTATTCTTTGTAGTTTAGTATGTCCTTTGTGATTGTGGGTTATATTTGGGTTGGTCTTCTTGGTTCCTCCTTACATGCATAACTTTTTTGAAGTTATAAGGACATCGGTTTCTTGTTTTCCTTAAATTTCCTGTGCTTCTTACTCTTTCTTTTTGATGTGAGATTTTCTAGGATGGTTCTTGCAACGGGTTACAGCACTATGCTGCTCTTGGACGAGACAAGGTAGTTAATATTTTAGCATCCATTTATTTCATAGCGTGTAGGTGATTGATATTTGCTAACATTATTATTGCTACTTTGGTAGCGCTAAAGAATTAACTAGAAGCAGTAAAATCACAATTCCGTTGGACATTCTGACTAAAAGAAATCCATGTGAAGCTTTTGTATATCCTGTTCTCATCAACAAAAGCAAAACATTTCTTTTAATAACAGACACCTAATGCATTGTATTCAGATGGTTCAGTATTTAGTTTAAATTTTCACGGATATTGTAAGTAGATTTATTAACAGCAAAACTAATTATATCCTTGATTTCTTTGTACCTTCACTTTTATTCCTTTACTCCATCTAGATTTGCTTCATCTACTGGTTGCTTCAGATCTTGTCCTAATGAAAGTTTTTGGTTCAGTTAGGAGCAGCTTCTGTCAATCTGGTTGCCGGAGAGAAGCCTGCAGATGTTTACTCGGGTATAGCTGCTAGGTATGTTACATAAACTTGAATATGAAATTTTTCGTCCAAAAGCTTGTGATTTGGTTGCTCACAATCACATTAGTAAAATTTCAGTACAAATGCAATCATGACAACAAATTTATTCTTCTCCTTGTGTTTTTAATATAATGAGGGAAGGTTCAGTTTCATTGGAAAAATTTAAGCTCTTTCCGACCCATTGTATTTTCTAAGACTTGATAGATTGTATGAAACAAAATAGTGGTTTGTTGAAAAGAGTCTACTCTTTAATGGATGTTGATGCATTTTCATTGTTCTGGGCTGTCCTTCAAGGAAATTACTTATCCTTAAATATTTCCGCTGTCTTAGAAGTAGAGACGTGAAAAATTCTTTTGAGTGGGGTAGGAGTTAGGGAACAGGTTTTGGTTGTCTCACATGTTGCGTGTGCCTGAGTGTGACGAAGTATCAAGATATCTGCTTTGGATTTGGACAACCATAGAACTTTAAATTATGTCACAGTTCTATAGCATGAATTTCTTGGGATCATCTTCACGCTGCATTTAAATATTGCTAGCAATTGTGATGACCTTACCACTTTGAGGTGGAACATTGACGAGGCAATAGTTGATGCCAGTGGACTTGCATGTTTATATCATGTCTATTTTCAGTTTCTAATCTCCATCAATAATGGGAATCAAGTTAAAATAAAATTCGAAAAGATAGATGGATTTGCAAGTCCTGTGGCGTCCATATTTTCTTGAACTTGTTCCACTTTGCCATCCGGTCAATGTTTAGTTAATGGCATACTCGGGTTCCCCCTAATAAAAAAGAAAAAGGAAACATAGGAATTTCTTTCCTTTTGTTAATTTTCTTTATAAATTTTAAATTTCATCAGATGTTAATAAAACAATAAGTTATAAATAGTTGTATAACTCACGATGTGGCATGTACAAAGGAGGAGAAAAAAAATCTCCCAGCAACCATTGATGAATTAAAAAAATGATCTCCAACTTTTGTTTGGCAAAAACGTTTGGGGGAAGGGTTGGGTTATGGAGGGTTAGGGTTATGATAAACCTAATGTTATGATAAACCTAGGATTATGATAAGATGTGTTTGGGGGAAGAGTTATGGATGAAGTGTTATGATAAAATGTGTTTGGGGGAAGGGTTATGAAGGAAGTGTTATGATAATGTTTTGATAAGATGTGTTTGGGAGAAGGGTTATGATAGATTAAGGAAGAGTTGAAGAAGAGTTAAGGAAAAGTTGAAGAAGAGTTAAAAAGTGTTGAAGAATGATTGTGGAAAAGTTGAAGAAGGGTTAAAAAGTGTTGAAGAAGGGTTTGAGGAAGGGTTAAGGGGCTAAAACTAGGGTTACATAACTCTTCCCCCAAACGAGGGTTGGATTACATAACCCTAACCCCCATAACCAACCCTTCCCCCAAACGCCACTTAATCTTAAACATGGAATGTCTGATCCTTTTGAGGAATTTTAATGATCCAGAAACAACGAAACAGACAGTTATGTCTGAATTCTAAGTGGGTTTCTTACTTCACCTCAGGGAGCTTTACAAATCCTTTATTTCATTTTCTAAAACAAGATCCTTATGTACTTGAACCTGATTTTACTAGTCTTTACATGTAGCAGTTTGTAAACAATCTGGAGTCTGTAGGACTCTAACTGATTTTAGAAGTTGGCATGTTAGGATACTGATACCATTTTATTCCCCTTTCTAGTGGATGAAGTAAGGCATTTAATTAATAACACCATGGATTTTGTTTTTAGTTTCTTTTTTTTTTGCGCGGGGGGAAGACCTACACCACTGAAGTTATATATATTATATATTTATTGTTGTAGGGTTCAAGAAATCTTGCGAAGGGATGCACAAAAAGATCCAGAAACTTTTCCAGATGCAATGTATGCAAAAAAATTAATAGATCAGGTTTGCTGCCAACTTGAGATCTCGGAACATTAATCTATGTAATTACAGTGCAAAATGGGAAAGTATAGACTATTTGATGCAATAACTGAATATTTTGCGATAAGAAAAAAACTGATACTATGTAGACCTAACTGATGTTTATGCTTGCTTTGATTGTTTTTTATCCTTGTTGTCAAAACTCTTATAGGTGGACAGAAAATTGGTGAAGCAAACAGTGATGACATCGGTTTATGGTGTCACCTATATTGGTGCTCGCGATCAGATCAAAAGGAGGCTGAAGGAACGCGCTGCCATATCTGATGATTCAGAGCTCTTTGGCTGTTCTTGCTATGCTGCCAAGGTAGGGGGCGGGTCCTTCCACCTTCGTTTTGGGTGCTTCTTTGAATTAAATGTTTGAATGAGTGGTCAAGTATTTATAAAGTTTGCAACATAATGTGTGAGCAGATGACGTTGGAGGCACTAGGGGAAATGTTTGTAGCAGCCCGTGAGATCATGAACTGGCTTTCTGACTGTGCAAAAGTTAGTTCTTTTCTTAGCATTTTTCTTTAAGGGAAAAAAAAAAAACATTTTGAACTCCCCTTTGGCTATGTTTGGAAATAATATGAAGTTTGTATTCAAATAGATTATTGCCTCGAAAAATGAAAGTGTGCGATGGACTACACCCCTTGGATTACCCGTTGTGCAACCATATCGCAAGTTGGGAGCACTTTCTGTGAGTGTTGAGGAATTTAGATAATCACTAAAGCTTACCAGTCCTCTCACGATAGTATTGAAGAGATATTCGAAGACATTAACTAATCTCTGTTTGGTTTCAGATCAAAACTTCTCTCCAAGTTTTGACACTAAGAAGAGAAACAGACAAGGTAGTTTTATACATTCACTTGAAACTACTCATATTATCAATGAACATTAAAATTTTCTTTTAAAAAGATTGATCAAAAGATTTTTCTTTGGACGTTGCAGATCTTGACAAGTAGACAGCGTACCGCTTTCCCACCAAATTTTGTTCACTCTCTTGATAGTTCTCATATGATGATGACTGCAATTGCCTGCAATAGGGCAGGTTTGACTTTTGCAGGTTGGTCCTCATGAATTACTGTGTTATGTACGCTTTCACACTCTACCAGTGCTAACTGCTGTATGTCATGCGTGATATCAGGGGTTCATGATTCATACTGGACACATGCTTGTGACGTGGATGAAATGAATAGAATACTTAGACAGAAGTTTGTTGAACTCTATGAAACTCCAAAGGTGTACTGCGACGAGACGATGTAGGAGGCTTTCAACCTCATGACTTCTATTTCATTTCTGAACATACTAATGGGGAAGAAGCTAAGTCTGTCCCTCGTTGGTTTTAGGTGTGTATGAAATGTACGCTCTAGTCTTTAAACATTGTGTTGTGATTCAGAGGCAAGAGGGAAAGCAGCAAGAGGTTTTGGATAATTTCAATCTTTGAAATTTGTTGCCTCTAATATGCAATGGATTAACTTAGGAATACTTCTTGGTTTGAAAGAAAATGCAATTGACGTGGGAGAGGATTTAGACAGCGTCTTGTAATTATTTTTCTTCTTTATTTGTTATTTTGGAACTGTTCAATGTCCAGTGCTTTTTCTTGATGTAAAACGCAGCATCGTTTCCCTCATTTTACTTTTATTCTTTTTAGTCAGTAATTGACAATTCCTTCGGTAATATCTTGTTTGTTGGGGTTCTCCTCTGATTTCATAATTTTAAAAAGAAAAAAAAAAGGAAAGGAAGAAAGAAAGGAAAAGAAAAGAAAAGTAGAGAGGATTACAATGTCTATCGGTGATAAAGAAATAGAGGGTTCCATGGAAGTTGTGACAGTGTAAGTTCTTGTCTTTGGAATTGATAGTTTTTCTCTTGCTACTGATCAGGTACTATGTAGTTTATTAAATTCTTTTTCAAATTAATAGGAAGTTACATCATCATGAAGAATATTATTTGTCTATCTATTTACTATTGTTATGTGTTATACTTGTTGATGGTGCAACTAAAAATCTGACTAATTGTTTACTCATAGTTATTGGAGAGCTTTCAGCAATCTTTTCCAGCACTGGATTTTCCTCCCCTACCCGAACGAGGAGAGTTCGACCTAAAAGAAGTTCTAGACTCGCCTTACTTCTTCAACTAAGTTTATATGGGTACATTTCTCTTCATTCTCGGCTATCTTTACATGCTCAACCGGTTTTTCCTGGAAACGTACACCTATTGTTACTCAACTACATCTCAAGAGTAATGGAGCATGATGCTGAGAATCCCCGGAGCAAACTGGCCACTCTGTTGTAATAAACATCAGGTTTTCCTCTCTTACAAAGCTTACTCATGTCAAACTTCTAAAGAGCTCTCGACTCGCATATGCAGAAGAAAATGGTCGGACTAACAATCCTTTCTGAAGTACTTTTACGTATCTTCAACTAGAGCTGCTAGACTAACATATACGGATAAGCAACAACTTCCCATCCATTTTCATTCATCAGCGACGCTTAAAAGTCGAAATTGGCCATATTTTACGGGAAGGAAAGCCACAAATGATCAAGATTTCCACAGTAACAAAGGATTACTTGTATATATATTCCCCCACTCTATGATTAAGATAAAATGTGAAAGTAGTGAAAACAAAAAAGATCTCACCATTCCCATTTTCTGAATTCATCACAATTTCTTCAGCTCTGGCTTGCACATGTCTCTCTATGTAAATGTTTGTTGTATTTGCCATCTGAATTTTTGTACTCGTTTCTCTTGTTTGGTGAGGAAATGAGCTGACAGTATATCAATTTGACAAATGATAAGTTGATTTGCACAAAAGTGTGCTATTGCTAGTGTTACATATGACATAACATATTCTCATCTTTTGATTATGTGTCAAATGCTTTATATATGCACTTTCTATTTGTCATTAAACTCTAATAATTGTATAATCATTAAAAGAAATTAAATTTACCTAACAAAACAAATTAAAAATAAAGTTAAACTACAATTTAAAATTTTTGAATCTAAATTTGTGTTTATTTCATCATACTTTTAAATGTTTTTAATAGATGCTTATTCGGAAAATTGAATATAAAATTAAATTTTGGATACCATTTCATTTGTTTTTTTTACTTTTCATGACATTACCATTCAAATTTTAAATGTTAGAATCTAATAAAGATGTAATTAAAATCTTTACATTTTAAATATTCTTCTGAATTATTTATTTGATAATTAAAATGGATAACAATTTTAGATTGCAATGTTAAAATTTTAAATGGGTATATTTGCAACCATTCCTTATTTATTAAACAATCATATTTTTAACTATGCATTTGAAGACGCTTATTATCTTAAGGGTGAAGAGGGACTTAGTAAAGAGATTATGGTTGCTTTAACGCTACACATTACCATTAAGACCCACCGGGTAGAAAGCTTTGTTCTTCCTTTTAGTTAG

mRNA sequence

ATGATTTCCACGTCTATGTGGAAGACCATTGCAAAGCGAGGTATTTGTAGGAACCGGCAGTTTCATCCTGATTGGCGTTGCTTTTCCCGCTTCAATGGCGTTCTGGGTCGTCCTAACGAGTCTTTATTTCGCGATAAATTGATTTCTGGTAATCTTGTTCCTAGTTCACTTCCGAAGTTTGGGTTTTTTCAAATGGGTGTTGGTCGAAATCAAATTTTGTCTCAGGAAGATTACTATAGAAGCAGATTCTGTTTTGGGTCTATGGGAGCTCGAATTGGGTTAAATGGGTTGTGCCCAAAAGGATATTCTAGTGTTGCTGAGGCGGTTTCTTCAACAGATGTGGACGAAGATGCATCTCTTGACGGTGAAGTTCAGGAGTTATTGCAAGAGATGAGCAAAGAAGAGACGAGGCTGAAAACGGTGAAGGGAATGCCACATTCGAAGTATCTAATGCTGAGGAGGAGGCAGGTGACCGTAGAGGCTGAGGCGTGGGAAAAGGCAGTGAAGGAGTACAAGGAGCTATTAGAGGACATGTGTAAGCAGAAGTTAGCACCTAATTTGCCGTACGTAAAGTCCTTGTTCCTTGGCTGGTTCGAGCCTTTTCAAGAGGCTATAAATAAAGAGCAAGAATTAATCCAGAAAGGGAAGAAACCTCGAGCTCCATATGCTCCTTATTTTGTTCAATTACCTGCAGATAAGATGTCAGTAATCACAATGCATAAGTTGATGGGGATGTTGATGAAGGGATGTGAACACGGTAATATCAAGGTTGTGGTGGCTGCTTGTGCAATAGGAGATGCTATTGAACAGGAGGTAAGAATTCACAAGTTCTTGGAGAAAAAGAAAGAGAAAAAGCACAACAAAAATAATGAGAACAATTACCAGCCTGATTCTCAAGTGAAGGAACAAGAGAGGTTAAGGAAAACAGTGGCCAACTTGATTAAAAAGAAAAAGCATCAGGCTGTAGGACAGATAGCGAAGGGAACCGATGATTCAAGACCATGGGGCAGGGAAGCCAAAGCAAAGGTTGGGGCCCGTCTAATTGAGCTGTTGATACAAACAGCTTACATACAACCTCCTGCTGATCAGTTGGCCGATGGTCCACCTGATATTCGCCCTGCATTTTGGCACTCATTGAAAACTGTGGTGACAGATAATTCCGTCGGGAGACTTGGTGTCATTGAATGTGACCCTTTAGTCATCAAAGGCTTAGACCGGACTGCAAGACAAATCGTGATTCCCTATATGCCAATGTTGATGCCTCCAGTCAAATGGAGAGGCTATGACAAAGGTGGACACATCCTCTTGCCATCGTTTGCCATGCGCACTCATGGAGCCAAACAACAACGTGATGCGTTTAAGAGGACCCCAAAGGAACAATTAACTCCAGTATTTCAGGCCCTAGACACACTTGGAAATACCAAATGGAGAATAAATAAAAGGATACTCGGTGTTGTGGAAAGAATATGGAGCAGTGGAGGGGACCTTGCTGGTCTAGTGAATCGGGATGATGTTCCATTGCCAGAAAAACCTGATACTGAAGATGAAACGCTAATAAAAAAGTGGAAATGGGAAATCAGATCTGTGAAGAAAGAAAATATGGAGAGGCATTCACAACGTTGTGACATAGAGCTTAAACTTGCTGTAGCACGCAACATGAAGGATGAGGAAGGTTTTTACTATCCCCATAACGTAGACTTTCGAGGCCGTGCATATCCTATGCATCCACACTTGAATCATCTTGGTTCAGATCTCTGCCGAGGTATATTGGAGTTTGCAGAAGGTCGCCCACTCAGGAAGTCTGGCCTAAGTTGGCTGAAGATTCACTTGGCAAATCTTTTTGCTGGGGGCGTGGATAAATTATCTCATGATGGTCGAATGACATTTGTTGAGAATCATTTAGAAGATATATTTGACTCTGCTGACAAACCACTTGGAGGAAGACGTTGGTGGTTGAATGCTGAGGATCCTTTTCAGTTTTTAGCAGGATGCATGAATCTTACTGAAGCTTTGAGAAGCTCTTCTCCCGAAACATATATTTCACATATCCCCATACACCAGGATGGTTCTTGCAACGGGTTACAGCACTATGCTGCTCTTGGACGAGACAAGTTAGGAGCAGCTTCTGTCAATCTGGTTGCCGGAGAGAAGCCTGCAGATGTTTACTCGGGTATAGCTGCTAGGGTTCAAGAAATCTTGCGAAGGGATGCACAAAAAGATCCAGAAACTTTTCCAGATGCAATGTATGCAAAAAAATTAATAGATCAGGTGGACAGAAAATTGGTGAAGCAAACAGTGATGACATCGGTTTATGGTGTCACCTATATTGGTGCTCGCGATCAGATCAAAAGGAGGCTGAAGGAACGCGCTGCCATATCTGATGATTCAGAGCTCTTTGGCTGTTCTTGCTATGCTGCCAAGATGACGTTGGAGGCACTAGGGGAAATGTTTGTAGCAGCCCGTGAGATCATGAACTGGCTTTCTGACTGTGCAAAAATTATTGCCTCGAAAAATGAAAGTGTGCGATGGACTACACCCCTTGGATTACCCGTTGTGCAACCATATCGCAAGTTGGGAGCACTTTCTATCAAAACTTCTCTCCAAGTTTTGACACTAAGAAGAGAAACAGACAAGATCTTGACAAGTAGACAGCGTACCGCTTTCCCACCAAATTTTGTTCACTCTCTTGATAGTTCTCATATGATGATGACTGCAATTGCCTGCAATAGGGCAGGTTTGACTTTTGCAGGGGTTCATGATTCATACTGGACACATGCTTGTGACGTGGATGAAATGAATAGAATACTTAGACAGAAGTTTGTTGAACTCTATGAAACTCCAAAGTTATTGGAGAGCTTTCAGCAATCTTTTCCAGCACTGGATTTTCCTCCCCTACCCGAACGAGGAGAGTTCGACCTAAAAGAAACCCACCGGGTAGAAAGCTTTGTTCTTCCTTTTAGTTAG

Coding sequence (CDS)

ATGATTTCCACGTCTATGTGGAAGACCATTGCAAAGCGAGGTATTTGTAGGAACCGGCAGTTTCATCCTGATTGGCGTTGCTTTTCCCGCTTCAATGGCGTTCTGGGTCGTCCTAACGAGTCTTTATTTCGCGATAAATTGATTTCTGGTAATCTTGTTCCTAGTTCACTTCCGAAGTTTGGGTTTTTTCAAATGGGTGTTGGTCGAAATCAAATTTTGTCTCAGGAAGATTACTATAGAAGCAGATTCTGTTTTGGGTCTATGGGAGCTCGAATTGGGTTAAATGGGTTGTGCCCAAAAGGATATTCTAGTGTTGCTGAGGCGGTTTCTTCAACAGATGTGGACGAAGATGCATCTCTTGACGGTGAAGTTCAGGAGTTATTGCAAGAGATGAGCAAAGAAGAGACGAGGCTGAAAACGGTGAAGGGAATGCCACATTCGAAGTATCTAATGCTGAGGAGGAGGCAGGTGACCGTAGAGGCTGAGGCGTGGGAAAAGGCAGTGAAGGAGTACAAGGAGCTATTAGAGGACATGTGTAAGCAGAAGTTAGCACCTAATTTGCCGTACGTAAAGTCCTTGTTCCTTGGCTGGTTCGAGCCTTTTCAAGAGGCTATAAATAAAGAGCAAGAATTAATCCAGAAAGGGAAGAAACCTCGAGCTCCATATGCTCCTTATTTTGTTCAATTACCTGCAGATAAGATGTCAGTAATCACAATGCATAAGTTGATGGGGATGTTGATGAAGGGATGTGAACACGGTAATATCAAGGTTGTGGTGGCTGCTTGTGCAATAGGAGATGCTATTGAACAGGAGGTAAGAATTCACAAGTTCTTGGAGAAAAAGAAAGAGAAAAAGCACAACAAAAATAATGAGAACAATTACCAGCCTGATTCTCAAGTGAAGGAACAAGAGAGGTTAAGGAAAACAGTGGCCAACTTGATTAAAAAGAAAAAGCATCAGGCTGTAGGACAGATAGCGAAGGGAACCGATGATTCAAGACCATGGGGCAGGGAAGCCAAAGCAAAGGTTGGGGCCCGTCTAATTGAGCTGTTGATACAAACAGCTTACATACAACCTCCTGCTGATCAGTTGGCCGATGGTCCACCTGATATTCGCCCTGCATTTTGGCACTCATTGAAAACTGTGGTGACAGATAATTCCGTCGGGAGACTTGGTGTCATTGAATGTGACCCTTTAGTCATCAAAGGCTTAGACCGGACTGCAAGACAAATCGTGATTCCCTATATGCCAATGTTGATGCCTCCAGTCAAATGGAGAGGCTATGACAAAGGTGGACACATCCTCTTGCCATCGTTTGCCATGCGCACTCATGGAGCCAAACAACAACGTGATGCGTTTAAGAGGACCCCAAAGGAACAATTAACTCCAGTATTTCAGGCCCTAGACACACTTGGAAATACCAAATGGAGAATAAATAAAAGGATACTCGGTGTTGTGGAAAGAATATGGAGCAGTGGAGGGGACCTTGCTGGTCTAGTGAATCGGGATGATGTTCCATTGCCAGAAAAACCTGATACTGAAGATGAAACGCTAATAAAAAAGTGGAAATGGGAAATCAGATCTGTGAAGAAAGAAAATATGGAGAGGCATTCACAACGTTGTGACATAGAGCTTAAACTTGCTGTAGCACGCAACATGAAGGATGAGGAAGGTTTTTACTATCCCCATAACGTAGACTTTCGAGGCCGTGCATATCCTATGCATCCACACTTGAATCATCTTGGTTCAGATCTCTGCCGAGGTATATTGGAGTTTGCAGAAGGTCGCCCACTCAGGAAGTCTGGCCTAAGTTGGCTGAAGATTCACTTGGCAAATCTTTTTGCTGGGGGCGTGGATAAATTATCTCATGATGGTCGAATGACATTTGTTGAGAATCATTTAGAAGATATATTTGACTCTGCTGACAAACCACTTGGAGGAAGACGTTGGTGGTTGAATGCTGAGGATCCTTTTCAGTTTTTAGCAGGATGCATGAATCTTACTGAAGCTTTGAGAAGCTCTTCTCCCGAAACATATATTTCACATATCCCCATACACCAGGATGGTTCTTGCAACGGGTTACAGCACTATGCTGCTCTTGGACGAGACAAGTTAGGAGCAGCTTCTGTCAATCTGGTTGCCGGAGAGAAGCCTGCAGATGTTTACTCGGGTATAGCTGCTAGGGTTCAAGAAATCTTGCGAAGGGATGCACAAAAAGATCCAGAAACTTTTCCAGATGCAATGTATGCAAAAAAATTAATAGATCAGGTGGACAGAAAATTGGTGAAGCAAACAGTGATGACATCGGTTTATGGTGTCACCTATATTGGTGCTCGCGATCAGATCAAAAGGAGGCTGAAGGAACGCGCTGCCATATCTGATGATTCAGAGCTCTTTGGCTGTTCTTGCTATGCTGCCAAGATGACGTTGGAGGCACTAGGGGAAATGTTTGTAGCAGCCCGTGAGATCATGAACTGGCTTTCTGACTGTGCAAAAATTATTGCCTCGAAAAATGAAAGTGTGCGATGGACTACACCCCTTGGATTACCCGTTGTGCAACCATATCGCAAGTTGGGAGCACTTTCTATCAAAACTTCTCTCCAAGTTTTGACACTAAGAAGAGAAACAGACAAGATCTTGACAAGTAGACAGCGTACCGCTTTCCCACCAAATTTTGTTCACTCTCTTGATAGTTCTCATATGATGATGACTGCAATTGCCTGCAATAGGGCAGGTTTGACTTTTGCAGGGGTTCATGATTCATACTGGACACATGCTTGTGACGTGGATGAAATGAATAGAATACTTAGACAGAAGTTTGTTGAACTCTATGAAACTCCAAAGTTATTGGAGAGCTTTCAGCAATCTTTTCCAGCACTGGATTTTCCTCCCCTACCCGAACGAGGAGAGTTCGACCTAAAAGAAACCCACCGGGTAGAAAGCTTTGTTCTTCCTTTTAGTTAG

Protein sequence

MISTSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKFGFFQMGVGRNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASLDGEVQELLQEMSKEETRLKTVKGMPHSKYLMLRRRQVTVEAEAWEKAVKEYKELLEDMCKQKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPADKMSVITMHKLMGMLMKGCEHGNIKVVVAACAIGDAIEQEVRIHKFLEKKKEKKHNKNNENNYQPDSQVKEQERLRKTVANLIKKKKHQAVGQIAKGTDDSRPWGREAKAKVGARLIELLIQTAYIQPPADQLADGPPDIRPAFWHSLKTVVTDNSVGRLGVIECDPLVIKGLDRTARQIVIPYMPMLMPPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALDTLGNTKWRINKRILGVVERIWSSGGDLAGLVNRDDVPLPEKPDTEDETLIKKWKWEIRSVKKENMERHSQRCDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLRKSGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLEDIFDSADKPLGGRRWWLNAEDPFQFLAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIAARVQEILRRDAQKDPETFPDAMYAKKLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKMTLEALGEMFVAAREIMNWLSDCAKIIASKNESVRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRETDKILTSRQRTAFPPNFVHSLDSSHMMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRILRQKFVELYETPKLLESFQQSFPALDFPPLPERGEFDLKETHRVESFVLPFS

Homology

[Close]

BLAST of Pay0017264 vs. ExPASy Swiss-Prot
Match: Q8VWF8 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial OS=Nicotiana sylvestris OX=4096 GN=RPOT2 PE=2 SV=2)

HSP 1 Score: 1331.6 bits (3445), Expect = 0.0e+00
Identity = 672/994 (67.61%), Postives = 792/994 (79.68%), Query Frame = 0


Query: 3    STSMWKTIAKRGICRNRQFHPDWRCFSRFN---GVLGRPNESLFRDKLISGNLVPSSLPK 62
            S  MW+ I K+   R     P    FS  N     LG   +S+F+D     +L+P S   
Sbjct: 32   SPIMWRNIIKQLSSRT----PQKLLFSSKNRTYSFLGFGQDSIFKDNTKFRSLIPISCSN 91

Query: 63   --FGFFQMGVGRNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAE--AVSSTDVD 122
               GF  +G    + L  +++         +  ++  N  C K Y+SVAE  AVSSTD +
Sbjct: 92   IVMGFQNLG----EYLPGDEFLSRPL----IKNQVNNNFCCRKSYASVAEAVAVSSTDAE 151

Query: 123  EDASLDGEVQELLQEMSKEETR---------LKTVKGMPHSKYLMLRRRQVTVEAEAWEK 182
            ED S+  EV ELL E+ KEE +              GM H KY  L+RRQV VE EAWE+
Sbjct: 152  EDVSVVDEVHELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQ 211

Query: 183  AVKEYKELLEDMCKQKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYF 242
            A KEYKELL DMC+QKLAPNLPYVKSLFLGWFEP ++ I +EQEL  +GK  +A YA YF
Sbjct: 212  AAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKS-KAAYAKYF 271

Query: 243  VQLPADKMSVITMHKLMGMLMKGCEHGNIKVVVAACAIGDAIEQEVRIHKFLEKKKEKKH 302
             QLPAD M+VITMHKLMG+LM G +HG  +VV AA  IGDAIEQEVRIH FLEK K++K 
Sbjct: 272  YQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKA 331

Query: 303  NKNNENNYQPDSQVKEQERLRKTVANLIKKKKHQAVGQIAKGTDDSRPWGREAKAKVGAR 362
             K+ +     +   +EQE+LRK V NL+KK+K +AVGQI +  DDS+PWG++A+AKVG+R
Sbjct: 332  EKDKQKE-DGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDARAKVGSR 391

Query: 363  LIELLIQTAYIQPPADQLADGPPDIRPAFWHSLKTVV--TDNSVGRLGVIECDPLVIKGL 422
            LI+LL+QTAYIQPPA+QLA  PPDIRPAF HS++TV   T ++  R G+I+CD LV KGL
Sbjct: 392  LIDLLLQTAYIQPPANQLAVDPPDIRPAFVHSVRTVAKETKSASRRYGIIQCDELVFKGL 451

Query: 423  DRTARQIVIPYMPMLMPPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPV 482
            +RTAR +VIPYMPML+PPVKW GYDKGGH+ LPS+ MRTHGA+QQR+A KR  + QL PV
Sbjct: 452  ERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPV 511

Query: 483  FQALDTLGNTKWRINKRILGVVERIWSSGGDLAGLVNRDDVPLPEKPDTEDETLIKKWKW 542
            F+ALDTLGNTKWRINKR+L VV+RIW+ GG LA LV+RDD PLPE+PDTEDE L  KW+W
Sbjct: 512  FEALDTLGNTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRW 571

Query: 543  EIRSVKKENMERHSQRCDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSD 602
            +++SVKKEN ERHSQRCDIELKLAVAR MKDEE F+YPHNVDFRGRAYPMHPHLNHLGSD
Sbjct: 572  KVKSVKKENRERHSQRCDIELKLAVARKMKDEESFFYPHNVDFRGRAYPMHPHLNHLGSD 631

Query: 603  LCRGILEFAEGRPLRKSGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLEDIFDSADKP 662
            +CRG+LEFAEGRPL +SGL WLKIHLANLFAGGV+KLS +GR+ F ENH++DIFDS+DKP
Sbjct: 632  ICRGVLEFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIGFTENHMDDIFDSSDKP 691

Query: 663  LGGRRWWLNAEDPFQFLAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDK 722
            L GRRWWLNAEDPFQ LA C+NL+EA+RSSSPET +SHIP+HQDGSCNGLQHYAALGRDK
Sbjct: 692  LEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSVSHIPVHQDGSCNGLQHYAALGRDK 751

Query: 723  LGAASVNLVAGEKPADVYSGIAARVQEILRRDAQKDPETFPDAMYAKKLIDQVDRKLVKQ 782
            LGAA+VNLVAGEKPADVYSGIAARV +I++RDAQ+DP  FPDA+ A+ L++QVDRKLVKQ
Sbjct: 752  LGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARVLVNQVDRKLVKQ 811

Query: 783  TVMTSVYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKMTLEALGEMFVAAREIM 842
            TVMTSVYGVTYIGARDQIKRRLKER AI+DDSELFG +CYAAK+TL ALGEMF AAR IM
Sbjct: 812  TVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIM 871

Query: 843  NWLSDCAKIIASKNESVRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRETDKILTSRQ 902
             WL +CAKIIAS+NE VRWTTPLGLPVVQPYRK+G   IKTSLQ+LTL+RET+K++  RQ
Sbjct: 872  TWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQRETEKVMVKRQ 931

Query: 903  RTAFPPNFVHSLDSSHMMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRILRQKFVELY 962
            RTAFPPNF+HSLD SHMMMTA+AC RAGL FAGVHDSYWTHACDVD++NRILR+KFVELY
Sbjct: 932  RTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELY 991

Query: 963  ETP---KLLESFQQSFPALDFPPLPERGEFDLKE 976
            E P   KLLESFQ S+P L FPPLPERG+FD+++
Sbjct: 992  EAPILEKLLESFQTSYPTLLFPPLPERGDFDMRD 1011

[Close]

BLAST of Pay0017264 vs. ExPASy Swiss-Prot
Match: Q8L6J3 (DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial OS=Nicotiana tabacum OX=4097 GN=RPOT2-TOM PE=2 SV=2)

HSP 1 Score: 1331.2 bits (3444), Expect = 0.0e+00
Identity = 673/994 (67.71%), Postives = 792/994 (79.68%), Query Frame = 0


Query: 3    STSMWKTIAKRGICRNRQFHPDWRCFSRFN---GVLGRPNESLFRDKLISGNLVPSSLPK 62
            S  MW+ I K+   R     P    FS  N     LG   +S+F+D     +L+P S   
Sbjct: 32   SPIMWRNIIKQLSSRT----PQKLLFSSKNRTYSFLGFGQDSVFKDNTKFRSLIPISCSN 91

Query: 63   --FGFFQMGVGRNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAE--AVSSTDVD 122
               GF  +G    + L  +++         + +    +  C K Y+SVAE  AVSSTD +
Sbjct: 92   IVMGFQNLG----EYLPGDEFLSRPLLKNQVNSN---DFCCRKSYASVAEAVAVSSTDAE 151

Query: 123  EDASLDGEVQELLQEMSKEETR---------LKTVKGMPHSKYLMLRRRQVTVEAEAWEK 182
            ED S+  EVQELL E+ KEE +              GM H KY  L+RRQV VE EAWE+
Sbjct: 152  EDVSVVDEVQELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQ 211

Query: 183  AVKEYKELLEDMCKQKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYF 242
            A KEYKELL DMC+QKLAPNLPYVKSLFLGWFEP ++ I +EQEL  +GK  +A YA Y 
Sbjct: 212  AAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKS-KAAYAKYL 271

Query: 243  VQLPADKMSVITMHKLMGMLMKGCEHGNIKVVVAACAIGDAIEQEVRIHKFLEKKKEKKH 302
             QLPAD M+VITMHKLMG+LM G +HG  +VV AA  IGDAIEQEVRIH FLEK K++K 
Sbjct: 272  YQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKA 331

Query: 303  NKNNENNYQPDSQVKEQERLRKTVANLIKKKKHQAVGQIAKGTDDSRPWGREAKAKVGAR 362
             K+ +     +   +EQE+LRK V NL+KK+K +AVGQI +  DDS+PWG++AKAKVG+R
Sbjct: 332  EKDKQKE-DGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDAKAKVGSR 391

Query: 363  LIELLIQTAYIQPPADQLADGPPDIRPAFWHSLKTVV--TDNSVGRLGVIECDPLVIKGL 422
            LIELL+QTAYIQPPA+QLA  PPDIRPAF HS++TV   T ++  R G+I+CD LV KGL
Sbjct: 392  LIELLLQTAYIQPPANQLAVDPPDIRPAFLHSVRTVAKETKSASRRYGIIQCDELVFKGL 451

Query: 423  DRTARQIVIPYMPMLMPPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPV 482
            +RTAR +VIPYMPML+PPVKW GYDKGGH+ LPS+ MRTHGA+QQR+A KR  + QL PV
Sbjct: 452  ERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPV 511

Query: 483  FQALDTLGNTKWRINKRILGVVERIWSSGGDLAGLVNRDDVPLPEKPDTEDETLIKKWKW 542
            F+ALDTLG+TKWRINKR+L V++RIW+ GG LA LV+RDD PLPE+PDTEDE L  KW+W
Sbjct: 512  FEALDTLGSTKWRINKRVLSVIDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRW 571

Query: 543  EIRSVKKENMERHSQRCDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSD 602
            +++SVKKEN ERHSQRCDIELKLAVAR MKDEEGF+YPHNVDFRGRAYPMHPHLNHLGSD
Sbjct: 572  KVKSVKKENRERHSQRCDIELKLAVARKMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSD 631

Query: 603  LCRGILEFAEGRPLRKSGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLEDIFDSADKP 662
            +CRG+L FAEGRPL +SGL WLKIHLANLFAGGV+KLS +GR+ F ENH++DIFDSADKP
Sbjct: 632  ICRGVLVFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIAFTENHMDDIFDSADKP 691

Query: 663  LGGRRWWLNAEDPFQFLAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDK 722
            L GRRWWLNAEDPFQ LA C+NL+EA+RSSSPET ISHIP+HQDGSCNGLQHYAALGRD+
Sbjct: 692  LEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSISHIPVHQDGSCNGLQHYAALGRDE 751

Query: 723  LGAASVNLVAGEKPADVYSGIAARVQEILRRDAQKDPETFPDAMYAKKLIDQVDRKLVKQ 782
            LGAA+VNLVAGEKPADVYSGIAARV +I++RDAQ+DP  FPDA+ A+ L++QVDRKLVKQ
Sbjct: 752  LGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARALVNQVDRKLVKQ 811

Query: 783  TVMTSVYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKMTLEALGEMFVAAREIM 842
            TVMTSVYGVTYIGARDQIKRRLKER AI+DDSELFG +CYAAK+TL ALGEMF AAR IM
Sbjct: 812  TVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIM 871

Query: 843  NWLSDCAKIIASKNESVRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRETDKILTSRQ 902
             WL +CAKIIAS+NE VRWTTPLGLPVVQPYRK+G   IKTSLQ+LTL++ET+K++  RQ
Sbjct: 872  TWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQQETEKVMVKRQ 931

Query: 903  RTAFPPNFVHSLDSSHMMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRILRQKFVELY 962
            RTAFPPNF+HSLD SHMMMTA+AC RAGL FAGVHDSYWTHACDVD++NRILR+KFVELY
Sbjct: 932  RTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELY 991

Query: 963  ETP---KLLESFQQSFPALDFPPLPERGEFDLKE 976
            ETP   KLLESFQ S+P L FPPLPERG+FDL++
Sbjct: 992  ETPILEKLLESFQTSYPTLLFPPLPERGDFDLRD 1012

[Close]

BLAST of Pay0017264 vs. ExPASy Swiss-Prot
Match: Q8L6J5 (DNA-directed RNA polymerase 1B, mitochondrial OS=Nicotiana tabacum OX=4097 GN=RPOT1-TOM PE=2 SV=2)

HSP 1 Score: 1265.4 bits (3273), Expect = 0.0e+00
Identity = 626/888 (70.50%), Postives = 729/888 (82.09%), Query Frame = 0


Query: 100 KGYSSVAEAVSSTDVDEDASLDGEVQELLQEMSKEETRL---------KTVKGMPHSKYL 159
           + Y S AEA+ ST  +ED     E+QEL++EM KE   L         KT+ GM   KY 
Sbjct: 112 RSYGSAAEAIVSTS-EEDID---EIQELIEEMDKENEALKANLQPKQPKTIGGMGVGKYN 171

Query: 160 MLRRRQVTVEAEAWEKAVKEYKELLEDMCKQKLAPNLPYVKSLFLGWFEPFQEAINKEQE 219
            LRRRQ+ VE EAWE+A KEY+ELL DMC+QKLAPNLPY+KSLFLGWFEP ++AI  EQ+
Sbjct: 172 FLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQK 231

Query: 220 LIQKGKKPRAPYAPYFVQLPADKMSVITMHKLMGMLMKGCEHGNIKVVVAACAIGDAIEQ 279
           L  +GK  R  YAP+F QLPA+ M+VITMHKLMG+LM G   G+ +VV AA  IG+AIE 
Sbjct: 232 LCDEGKN-RGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEH 291

Query: 280 EVRIHKFLEKKKEKKHNKNNENNYQPDSQVKEQERLRKTVANLIKKKKHQAVGQIAKGTD 339
           E RIH+FLEK K K +  + +    P   +KE+ERLRK V  L+KK+K + V +I K  D
Sbjct: 292 EARIHRFLEKTK-KSNALSGDLEETPGDMMKERERLRKKVKILMKKQKLRQVRKIVKQQD 351

Query: 340 DSRPWGREAKAKVGARLIELLIQTAYIQPPADQLADGPPDIRPAFWHSLKTVVTDNSVGR 399
           D +PWG++   KVG RLI++L++TAYIQPP DQL DGPPDIRPAF H+LKTV T     R
Sbjct: 352 DEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTVETMKGSRR 411

Query: 400 LGVIECDPLVIKGLDRTARQIVIPYMPMLMPPVKWRGYDKGGHILLPSFAMRTHGAKQQR 459
            GVI+CDPLV KGLD+TAR +VIPYMPML+PP  W GYDKGG++ LPS+ MRTHGAKQQR
Sbjct: 412 YGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQR 471

Query: 460 DAFKRTPKEQLTPVFQALDTLGNTKWRINKRILGVVERIWSSGGDLAGLVNRDDVPLPEK 519
           +A KR PK+QL PVFQALDTLGNTKWR+N+++LG+V+RIW+SGG LA LV+R+DVPLPE 
Sbjct: 472 EAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDREDVPLPEA 531

Query: 520 PDTEDETLIKKWKWEIRSVKKENMERHSQRCDIELKLAVARNMKDEEGFYYPHNVDFRGR 579
           PDTEDE  I+KWKW+++ VKKEN ERHSQRCDIELKLAVAR MKDE+GFYYPHN+DFRGR
Sbjct: 532 PDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGR 591

Query: 580 AYPMHPHLNHLGSDLCRGILEFAEGRPLRKSGLSWLKIHLANLFAGGVDKLSHDGRMTFV 639
           AYPMHP+LNHLGSDLCRGILEFAEGRPL  SGL WLKIHLAN++ GGVDKLS++GR+ F 
Sbjct: 592 AYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAFS 651

Query: 640 ENHLEDIFDSADKPLGGRRWWLNAEDPFQFLAGCMNLTEALRSSSPETYISHIPIHQDGS 699
           ENHLEDIFDSA++PL G+RWWL AEDPFQ LA C+N+ EALRS SPET IS++PIHQDGS
Sbjct: 652 ENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGS 711

Query: 700 CNGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIAARVQEILRRDAQKDPETFPDAMYA 759
           CNGLQHYAALGRDKLGAA+VNLVAG+KPADVYSGIAARV +I++RDA KDP   P+ M A
Sbjct: 712 CNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRA 771

Query: 760 KKLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKMTL 819
           + LI+QVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKER  I DD+ELF  +CYAAK TL
Sbjct: 772 RLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTL 831

Query: 820 EALGEMFVAAREIMNWLSDCAKIIASKNESVRWTTPLGLPVVQPYRKLGALSIKTSLQVL 879
            ALGEMF AAR IM+WL DCAKIIA +N  VRWTTPLGLPVVQPYRKLG   IKTSLQ+L
Sbjct: 832 TALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQIL 891

Query: 880 TLRRETDKILTSRQRTAFPPNFVHSLDSSHMMMTAIACNRAGLTFAGVHDSYWTHACDVD 939
           TL+RETDK++  RQRTAFPPNFVHSLD SHMMMTAIAC  +GL+FAGVHDSYWTHACDVD
Sbjct: 892 TLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVD 951

Query: 940 EMNRILRQKFVELYETP---KLLESFQQSFPALDFPPLPERGEFDLKE 976
           +MN+ILR+KFVELY+ P    LLESFQQSFP L FPPLPERG+FDL+E
Sbjct: 952 QMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLRE 993

[Close]

BLAST of Pay0017264 vs. ExPASy Swiss-Prot
Match: Q93Y94 (DNA-directed RNA polymerase 1, mitochondrial OS=Nicotiana sylvestris OX=4096 GN=RPOT1 PE=2 SV=1)

HSP 1 Score: 1255.7 bits (3248), Expect = 0.0e+00
Identity = 622/888 (70.05%), Postives = 729/888 (82.09%), Query Frame = 0


Query: 100 KGYSSVAEAVSSTDVDEDASLDGEVQELLQEMSKEETRL---------KTVKGMPHSKYL 159
           + Y S AEA++ST  +ED     E+QEL++EM+KE   L         KT+ GM   KY 
Sbjct: 112 RSYGSAAEAIASTS-EEDID---EIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGKYN 171

Query: 160 MLRRRQVTVEAEAWEKAVKEYKELLEDMCKQKLAPNLPYVKSLFLGWFEPFQEAINKEQE 219
           +LRRRQ+ VE EAWE+A KEY+ELL DMC+QKLAPNLPY+KSLFLGWFEP ++AI  EQ+
Sbjct: 172 LLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQK 231

Query: 220 LIQKGKKPRAPYAPYFVQLPADKMSVITMHKLMGMLMKGCEHGNIKVVVAACAIGDAIEQ 279
           L  +GK  R  YAP+F QLPA+ M+VITMHKLMG+LM G   G+ +VV AA  IG+AIE 
Sbjct: 232 LCDEGKN-RGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEAIEH 291

Query: 280 EVRIHKFLEKKKEKKHNKNNENNYQPDSQVKEQERLRKTVANLIKKKKHQAVGQIAKGTD 339
           E RIH+FLEK K K +  + +    P   +KE+ER+RK V  L+KK+K Q V +I K  D
Sbjct: 292 EARIHRFLEKTK-KSNALSGDLEDTPGDIMKERERVRKKVKILMKKQKLQQVRKIVKQQD 351

Query: 340 DSRPWGREAKAKVGARLIELLIQTAYIQPPADQLADGPPDIRPAFWHSLKTVVTDNSVGR 399
           D +PWG++   KVG RLI++L++TAYIQPP DQL D PPDIRPAF H+LKTV T     R
Sbjct: 352 DEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTVETMKGSRR 411

Query: 400 LGVIECDPLVIKGLDRTARQIVIPYMPMLMPPVKWRGYDKGGHILLPSFAMRTHGAKQQR 459
            GVI+CDPLV KGLD+TAR +VIPYMPML+PP  W GYDKG ++ LPS+ MRTHGAKQQR
Sbjct: 412 YGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAKQQR 471

Query: 460 DAFKRTPKEQLTPVFQALDTLGNTKWRINKRILGVVERIWSSGGDLAGLVNRDDVPLPEK 519
           +A KR PK+QL PVFQALDTLGNTKWR+N+++LG+V+RIW+SGG LA LV+R+DVPLPE+
Sbjct: 472 EAVKRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPLPEE 531

Query: 520 PDTEDETLIKKWKWEIRSVKKENMERHSQRCDIELKLAVARNMKDEEGFYYPHNVDFRGR 579
           PD EDE  I+KWKW+++ VKKEN ERHSQRCDIELKLAVAR MKDE+GFYYPHN+DFRGR
Sbjct: 532 PDAEDEAQIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGR 591

Query: 580 AYPMHPHLNHLGSDLCRGILEFAEGRPLRKSGLSWLKIHLANLFAGGVDKLSHDGRMTFV 639
           AYPMHP+LNHLGSDLCRGILEFAEGRPL KSGL WLKIHLAN++ GGVDKLS++GR+ F 
Sbjct: 592 AYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFS 651

Query: 640 ENHLEDIFDSADKPLGGRRWWLNAEDPFQFLAGCMNLTEALRSSSPETYISHIPIHQDGS 699
           ENH+EDIFDSA++PL G+RWWL AEDPFQ LA C+N+ EALRS SPET IS++PIHQDGS
Sbjct: 652 ENHVEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGS 711

Query: 700 CNGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIAARVQEILRRDAQKDPETFPDAMYA 759
           CNGLQHYAALGRD LGAA+VNLVAG+KPADVYSGIAARV +I++RDA KDP   P+ M A
Sbjct: 712 CNGLQHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRA 771

Query: 760 KKLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKMTL 819
           + LI+QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  I DD+ELF  +CYAAK TL
Sbjct: 772 RLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTL 831

Query: 820 EALGEMFVAAREIMNWLSDCAKIIASKNESVRWTTPLGLPVVQPYRKLGALSIKTSLQVL 879
            ALGEMF AAR IM+WL DCAKIIA +N  VRWTTPLGLPVVQPYRKLG   IKTSLQ+L
Sbjct: 832 TALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQIL 891

Query: 880 TLRRETDKILTSRQRTAFPPNFVHSLDSSHMMMTAIACNRAGLTFAGVHDSYWTHACDVD 939
           TL+RETDK++  RQRTAFPPNFVHSLD SHMMMTAIAC  +GL+FAGVHDSYWTHA DVD
Sbjct: 892 TLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVD 951

Query: 940 EMNRILRQKFVELYETP---KLLESFQQSFPALDFPPLPERGEFDLKE 976
           +MN+ILR+KFVELY+ P    LLESFQQSFP L FPPLPERG+FDL+E
Sbjct: 952 QMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLRE 993

[Close]

BLAST of Pay0017264 vs. ExPASy Swiss-Prot
Match: Q9LFV6 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPOT2 PE=1 SV=1)

HSP 1 Score: 1226.5 bits (3172), Expect = 0.0e+00
Identity = 623/985 (63.25%), Postives = 755/985 (76.65%), Query Frame = 0


Query: 3    STSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKFGF 62
            S  MW+ IAK+ I R+          S+  G+L    ES+F   L          P  G 
Sbjct: 37   SFPMWRNIAKQAISRSA---ARLNVSSQTRGLLVSSPESIFSKNL------SFRFPVLGS 96

Query: 63   FQMGVG---RNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVA-EAVSSTDVDEDA 122
               G G    + I  +E++ +S  C         L+G   +GY+SVA E V STDV+E+ 
Sbjct: 97   PCHGKGFRCLSGITRREEFSKSERC---------LSGTLARGYTSVAEEEVLSTDVEEEP 156

Query: 123  SLDGEVQELLQEMSKEETRLKTVK-----GMPHSKYLMLRRRQVTVEAEAWEKAVKEYKE 182
             +D  ++E+ +E  +E  R   +K     GM  +K+  L RRQV +E E WE+A  EY E
Sbjct: 157  EVDELLKEMKKEKKRESHRSWRMKKQDQFGMGRTKFQNLWRRQVKIETEEWERAAAEYME 216

Query: 183  LLEDMCKQKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPADK 242
            LL DMC+QKLAPNLPYVKSLFLGWFEP ++AI K+QEL + GK  +A YA Y  QLPADK
Sbjct: 217  LLTDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAKDQELYRLGKS-KATYAHYLDQLPADK 276

Query: 243  MSVITMHKLMGMLMKGCEHGNIKVVVAACAIGDAIEQEVRIHKFLEKKKEKKHNKNNENN 302
            +SVITMHKLMG LM G ++G +KVV AAC +GDAIEQE+RI  FL+KKK+   N+ +   
Sbjct: 277  ISVITMHKLMGHLMTGGDNGCVKVVHAACTVGDAIEQEIRICTFLDKKKKGDDNEES-GG 336

Query: 303  YQPDSQVKEQERLRKTVANLIKKKKHQAVGQIAKGTDDSRPWGREAKAKVGARLIELLIQ 362
             + ++ +KEQ++LRK V  LIKK+K  AV +I +  D ++PW  + +AKVG+RLIELL++
Sbjct: 337  VENETSMKEQDKLRKKVNELIKKQKLSAVRKILQSHDYTKPWIADVRAKVGSRLIELLVR 396

Query: 363  TAYIQPPADQLADGPPDIRPAFWHSLKTVVTDNSVGR-LGVIECDPLVIKGLDRTARQIV 422
            TAYIQ PADQ  +  PD+RPAF H+ K      + GR  GVIECDPLV KGL+++ R  V
Sbjct: 397  TAYIQSPADQQDNDLPDVRPAFVHTFKVAKGSMNSGRKYGVIECDPLVRKGLEKSGRYAV 456

Query: 423  IPYMPMLMPPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALDTLG 482
            +PYMPML+PP+KW GYDKG ++ L S+ M+THGAKQQR+A K  PK QL PVF+ALDTLG
Sbjct: 457  MPYMPMLVPPLKWSGYDKGAYLFLTSYIMKTHGAKQQREALKSAPKGQLQPVFEALDTLG 516

Query: 483  NTKWRINKRILGVVERIWSSGGDLAGLVNRDDVPLPEKPDTEDETLIKKWKWEIRSVKKE 542
            +TKWR+NKR+L VV+RIWSSGG +A +V+R DVPLPEKPDTEDE ++KKWKWE++S KK 
Sbjct: 517  STKWRVNKRVLTVVDRIWSSGGCVADMVDRSDVPLPEKPDTEDEGILKKWKWEVKSAKKV 576

Query: 543  NMERHSQRCDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGILEF 602
            N ERHSQRCD ELKL+VAR MKDEE FYYPHN+DFRGRAYPM PHLNHLGSDLCRG+LEF
Sbjct: 577  NSERHSQRCDTELKLSVARKMKDEEAFYYPHNMDFRGRAYPMPPHLNHLGSDLCRGVLEF 636

Query: 603  AEGRPLRKSGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLEDIFDSADKPLGGRRWWL 662
            AEGRP+  SGL WLKIHLANL+AGGVDKLS DGR+ F ENHL+DIFDSAD+PL G RWWL
Sbjct: 637  AEGRPMGISGLRWLKIHLANLYAGGVDKLSLDGRLAFTENHLDDIFDSADRPLEGSRWWL 696

Query: 663  NAEDPFQFLAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKLGAASVNL 722
             AEDPFQ LA C++LTEALRS SPET +SHIPIHQDGSCNGLQHYAALGRD LGA +VNL
Sbjct: 697  QAEDPFQCLAVCISLTEALRSPSPETVLSHIPIHQDGSCNGLQHYAALGRDTLGAEAVNL 756

Query: 723  VAGEKPADVYSGIAARVQEILRRDAQKDPETFPDAMYAKKLIDQVDRKLVKQTVMTSVYG 782
            VAGEKPADVYSGIA RV +I+RRDA +DPE FP+A+ A+KL++QVDRKLVKQTVMTSVYG
Sbjct: 757  VAGEKPADVYSGIATRVLDIMRRDADRDPEVFPEALRARKLLNQVDRKLVKQTVMTSVYG 816

Query: 783  VTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKMTLEALGEMFVAAREIMNWLSDCAK 842
            VTYIGARDQIKRRLKER+   D+ E+FG +CYAAK+TL A+ EMF AAR IM W  +CAK
Sbjct: 817  VTYIGARDQIKRRLKERSDFGDEKEVFGAACYAAKVTLAAIDEMFQAARAIMRWFGECAK 876

Query: 843  IIASKNESVRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRETDKILTSRQRTAFPPNF 902
            IIAS+NE+VRWTTPLGLPVVQPY ++G   +KTSLQ L+L+ ETD+++  RQRTAFPPNF
Sbjct: 877  IIASENETVRWTTPLGLPVVQPYHQMGTKLVKTSLQTLSLQHETDQVIVRRQRTAFPPNF 936

Query: 903  VHSLDSSHMMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRILRQKFVELYETP---KL 962
            +HSLD SHMMMTA+AC RAG+ FAGVHDS+WTHACDVD++N ILR+KFVELY  P    L
Sbjct: 937  IHSLDGSHMMMTAVACKRAGVCFAGVHDSFWTHACDVDKLNIILREKFVELYSQPILENL 996

Query: 963  LESFQQSFPALDFPPLPERGEFDLK 975
            LESF+QSFP LDFPPLPERG+ DLK
Sbjct: 997  LESFEQSFPHLDFPPLPERGDLDLK 1001

[Close]

BLAST of Pay0017264 vs. ExPASy TrEMBL
Match: A0A1S3CBC4 (DNA-directed RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103498556 PE=3 SV=1)

HSP 1 Score: 1974.9 bits (5115), Expect = 0.0e+00
Identity = 974/978 (99.59%), Postives = 974/978 (99.59%), Query Frame = 0


Query: 1   MISTSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKF 60
           MISTSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKF
Sbjct: 1   MISTSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKF 60

Query: 61  GFFQMGVGRNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASL 120
           GFFQMGVGRNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASL
Sbjct: 61  GFFQMGVGRNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASL 120

Query: 121 DGEVQELLQEMSKEETRLKTVKGMPHSKYLMLRRRQVTVEAEAWEKAVKEYKELLEDMCK 180
           DGEVQELLQEMSKEETRLKTVKGMPHSKYLMLRRRQVTVEAEAWEKAVKEYKELLEDMCK
Sbjct: 121 DGEVQELLQEMSKEETRLKTVKGMPHSKYLMLRRRQVTVEAEAWEKAVKEYKELLEDMCK 180

Query: 181 QKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPADKMSVITMH 240
           QKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPADKMSVITMH
Sbjct: 181 QKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPADKMSVITMH 240

Query: 241 KLMGMLMKGCEHGNIKVVVAACAIGDAIEQEVRIHKFLEKKKEKKHNKNNENNYQPDSQV 300
           KLMGMLMKGCEHGNIKVVVAACAIGDAIEQEVRIHKFLEKKKEKKHNKNNENNYQPDSQV
Sbjct: 241 KLMGMLMKGCEHGNIKVVVAACAIGDAIEQEVRIHKFLEKKKEKKHNKNNENNYQPDSQV 300

Query: 301 KEQERLRKTVANLIKKKKHQAVGQIAKGTDDSRPWGREAKAKVGARLIELLIQTAYIQPP 360
           KEQERLRKTVANLIKKKKHQAVGQIAKGTDDSRPWGREAKAKVGARLIELLIQTAYIQPP
Sbjct: 301 KEQERLRKTVANLIKKKKHQAVGQIAKGTDDSRPWGREAKAKVGARLIELLIQTAYIQPP 360

Query: 361 ADQLADGPPDIRPAFWHSLKTVVTDNSVGRLGVIECDPLVIKGLDRTARQIVIPYMPMLM 420
           ADQLADGPPDIRPAFWHSLKTVVTDNSVGRLGVIECDPLVIKGLDRTARQIVIPYMPMLM
Sbjct: 361 ADQLADGPPDIRPAFWHSLKTVVTDNSVGRLGVIECDPLVIKGLDRTARQIVIPYMPMLM 420

Query: 421 PPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALDTLGNTKWRINK 480
           PPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALDTLGNTKWRINK
Sbjct: 421 PPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALDTLGNTKWRINK 480

Query: 481 RILGVVERIWSSGGDLAGLVNRDDVPLPEKPDTEDETLIKKWKWEIRSVKKENMERHSQR 540
           RILGVVERIWSSGGDLAGLVNRDDVPLPEKPDTEDETLIKKWKWEIRSVKKENMERHSQR
Sbjct: 481 RILGVVERIWSSGGDLAGLVNRDDVPLPEKPDTEDETLIKKWKWEIRSVKKENMERHSQR 540

Query: 541 CDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLRK 600
           CDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLRK
Sbjct: 541 CDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLRK 600

Query: 601 SGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLEDIFDSADKPLGGRRWWLNAEDPFQF 660
           SGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLEDIFDSADKPLGGRRWWLNAEDPFQF
Sbjct: 601 SGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLEDIFDSADKPLGGRRWWLNAEDPFQF 660

Query: 661 LAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPAD 720
           LAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPAD
Sbjct: 661 LAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPAD 720

Query: 721 VYSGIAARVQEILRRDAQKDPETFPDAMYAKKLIDQVDRKLVKQTVMTSVYGVTYIGARD 780
           VYSGIAARVQEILRRDAQKDPETFPDAMYAKKLIDQVDRKLVKQTVMTSVYGVTYIGARD
Sbjct: 721 VYSGIAARVQEILRRDAQKDPETFPDAMYAKKLIDQVDRKLVKQTVMTSVYGVTYIGARD 780

Query: 781 QIKRRLKERAAISDDSELFGCSCYAAKMTLEALGEMFVAAREIMNWLSDCAKIIASKNES 840
           QIKRRLKERAAISDDSELFGCSCYAAKMTLEALGEMFVAAREIMNWLSDCAKIIASKNES
Sbjct: 781 QIKRRLKERAAISDDSELFGCSCYAAKMTLEALGEMFVAAREIMNWLSDCAKIIASKNES 840

Query: 841 VRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRETDKILTSRQRTAFPPNFVHSLDSSH 900
           VRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRETDKILTSRQRTAFPPNFVHSLDSSH
Sbjct: 841 VRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRETDKILTSRQRTAFPPNFVHSLDSSH 900

Query: 901 MMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRILRQKFVELYETP---KLLESFQQSF 960
           MMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRILRQKFVELYETP    LLESFQQSF
Sbjct: 901 MMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRILRQKFVELYETPILEDLLESFQQSF 960

Query: 961 PALDFPPLPERGEFDLKE 976
           PALDFPPLPERGEFDLKE
Sbjct: 961 PALDFPPLPERGEFDLKE 978

[Close]

BLAST of Pay0017264 vs. ExPASy TrEMBL
Match: A0A5D3BPC9 (DNA-directed RNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002200 PE=3 SV=1)

HSP 1 Score: 1969.5 bits (5101), Expect = 0.0e+00
Identity = 972/983 (98.88%), Postives = 974/983 (99.08%), Query Frame = 0


Query: 1   MISTSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKF 60
           MISTSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKF
Sbjct: 1   MISTSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKF 60

Query: 61  GFFQMGVGRNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASL 120
           GFFQMGVGRNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASL
Sbjct: 61  GFFQMGVGRNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASL 120

Query: 121 DGEVQELLQEMSKEETRLKTVKGMPHSKYLMLRRRQVTVEAEAWEKAVKEYKELLEDMCK 180
           DGEVQELLQEMSKEETRLKTVKGMPHSKYLMLRRRQVTVEAEAWEKAVKEYKELLEDMCK
Sbjct: 121 DGEVQELLQEMSKEETRLKTVKGMPHSKYLMLRRRQVTVEAEAWEKAVKEYKELLEDMCK 180

Query: 181 QKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPADKMSVITMH 240
           QKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPADKMSVITMH
Sbjct: 181 QKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPADKMSVITMH 240

Query: 241 KLMGMLMKGCEHGNIKVVVAACAIGDAIEQEVRIHKFLEKKKEKKHNKNNENNYQPDSQV 300
           KLMGMLMKGCEHGNIKVVVAACAIGDAIEQEV+IHKFLEKKKEKKHNKNNENNYQPDSQV
Sbjct: 241 KLMGMLMKGCEHGNIKVVVAACAIGDAIEQEVKIHKFLEKKKEKKHNKNNENNYQPDSQV 300

Query: 301 KEQERLRKTVANLIKKKKHQAVGQIAKGTDDSRPWGREAKAKVGARLIELLIQTAYIQPP 360
           KEQERLRKTVANLIKKKKH+AV QIAKGTDDSRPWGREAKAKVGARLIELLIQTAYIQPP
Sbjct: 301 KEQERLRKTVANLIKKKKHRAVEQIAKGTDDSRPWGREAKAKVGARLIELLIQTAYIQPP 360

Query: 361 ADQLADGPPDIRPAFWHSLKTVVTDNSVGRLGVIECDPLVIKGLDRTARQIVIPYMPMLM 420
           ADQLADGPPDIRPAFWHSLKTVVTDNSVGRLGVIECDPLVIKGLDRTARQIVIPYMPMLM
Sbjct: 361 ADQLADGPPDIRPAFWHSLKTVVTDNSVGRLGVIECDPLVIKGLDRTARQIVIPYMPMLM 420

Query: 421 PPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALDTLGNTKWRINK 480
           PPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALDTLGNTKWRINK
Sbjct: 421 PPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALDTLGNTKWRINK 480

Query: 481 RILGVVERIWSSGGDLAGLVNRDDVPLPEKPDTEDETLIKKWKWEIRSVKKENMERHSQR 540
           RILGVVERIWSSGGDLAGLVNRDDVPLPEKPDTEDETLIKKWKWEIRSVKKENMERHSQR
Sbjct: 481 RILGVVERIWSSGGDLAGLVNRDDVPLPEKPDTEDETLIKKWKWEIRSVKKENMERHSQR 540

Query: 541 CDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLRK 600
           CDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLRK
Sbjct: 541 CDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLRK 600

Query: 601 SGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLEDIFDSADKPLGGRRWWLNAEDPFQF 660
           SGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLEDIFDSADKPLGGRRWWLNAEDPFQF
Sbjct: 601 SGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLEDIFDSADKPLGGRRWWLNAEDPFQF 660

Query: 661 LAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPAD 720
           LAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPAD
Sbjct: 661 LAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPAD 720

Query: 721 VYSGIAARVQEILRRDAQKDPETFPDAMYAKKLIDQVDRKLVKQTVMTSVYGVTYIGARD 780
           VYSGIAARVQEILRRDAQKDPETFPDAMYAKKLIDQVDRKLVKQTVMTSVYGVTYIGARD
Sbjct: 721 VYSGIAARVQEILRRDAQKDPETFPDAMYAKKLIDQVDRKLVKQTVMTSVYGVTYIGARD 780

Query: 781 QIKRRLKERAAISDDSELFGCSCYAAKMTLEALGEMFVAAREIMNWLSDCAKIIASKNES 840
           QIKRRLKERAAISDDSELFGCSCYAAKMTLEALGEMFVAAREIMNWLSDCAKIIASKNES
Sbjct: 781 QIKRRLKERAAISDDSELFGCSCYAAKMTLEALGEMFVAAREIMNWLSDCAKIIASKNES 840

Query: 841 VRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRETDKILTSRQRTAFPPNFVHSLDSSH 900
           VRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRETDKILTSRQRTAFPPNFVHSLDSSH
Sbjct: 841 VRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRETDKILTSRQRTAFPPNFVHSLDSSH 900

Query: 901 MMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRILRQKFVELYETP--------KLLES 960
           MMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRILRQKFVELYETP        KLLES
Sbjct: 901 MMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRILRQKFVELYETPILEDPREKKLLES 960

Query: 961 FQQSFPALDFPPLPERGEFDLKE 976
           FQQSFPALDFPPLPERGEFDLKE
Sbjct: 961 FQQSFPALDFPPLPERGEFDLKE 983

[Close]

BLAST of Pay0017264 vs. ExPASy TrEMBL
Match: A0A5A7TDA0 (DNA-directed RNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G002190 PE=3 SV=1)

HSP 1 Score: 1955.3 bits (5064), Expect = 0.0e+00
Identity = 971/1003 (96.81%), Postives = 973/1003 (97.01%), Query Frame = 0


Query: 1    MISTSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKF 60
            MISTSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKF
Sbjct: 1    MISTSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKF 60

Query: 61   GFFQMGVGRNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASL 120
            GFFQMGVGRNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASL
Sbjct: 61   GFFQMGVGRNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASL 120

Query: 121  DGEVQELLQEMSKEETRLKTVKGMPHSKYLMLRRRQVTVEAEAWEKAVKEYKELLEDMCK 180
            DGEVQELLQEMSKEETRLKTVKGMPHSKYLMLRRRQVTVEAEAWEKAVKEYKELLEDMCK
Sbjct: 121  DGEVQELLQEMSKEETRLKTVKGMPHSKYLMLRRRQVTVEAEAWEKAVKEYKELLEDMCK 180

Query: 181  QKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPADKMSVITMH 240
            QKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPADKMSVITMH
Sbjct: 181  QKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPADKMSVITMH 240

Query: 241  KLMGMLMKGCEHGNIKVVVAACAIGDAIEQEVRIHKFLEKKKEKKHNKNNENNYQPDSQV 300
            KLMGMLMKGCEHGNIKVVVAACAIGDAIEQEV+IHKFLEKKKEKKHNKNNENNYQPDSQV
Sbjct: 241  KLMGMLMKGCEHGNIKVVVAACAIGDAIEQEVKIHKFLEKKKEKKHNKNNENNYQPDSQV 300

Query: 301  KEQERLRKTVANLIKKKKHQAVGQIAKGTDDSRPWGREAKAKVGARLIELLIQTAYIQPP 360
            KEQERLRKTVANLIKKKKH+AV QIAKGTDDSRPWGREAKAKVGARLIELLIQTAYIQPP
Sbjct: 301  KEQERLRKTVANLIKKKKHRAVEQIAKGTDDSRPWGREAKAKVGARLIELLIQTAYIQPP 360

Query: 361  ADQLADGPPDIRPAFWHSLKTVVTDNSVGRLGVIECDPLVIKGLDRTARQIVIPYMPMLM 420
            ADQLADGPPDIRPAFWHSLKTVVTDNSVGRLGVIECDPLVIKGLDRTARQIVIPYMPMLM
Sbjct: 361  ADQLADGPPDIRPAFWHSLKTVVTDNSVGRLGVIECDPLVIKGLDRTARQIVIPYMPMLM 420

Query: 421  PPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALDTLGNTKWRINK 480
            PPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALDTLGNTKWRINK
Sbjct: 421  PPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALDTLGNTKWRINK 480

Query: 481  RILGVVERIWSSGGDLAGLVNRDD-------------------------VPLPEKPDTED 540
            RILGVVERIWSSGGDLAGLVNRDD                         VPLPEKPDTED
Sbjct: 481  RILGVVERIWSSGGDLAGLVNRDDVSGFMSSFFLQLLLILILLWFFPFQVPLPEKPDTED 540

Query: 541  ETLIKKWKWEIRSVKKENMERHSQRCDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMH 600
            ETLIKKWKWEIRSVKKENMERHSQRCDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMH
Sbjct: 541  ETLIKKWKWEIRSVKKENMERHSQRCDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMH 600

Query: 601  PHLNHLGSDLCRGILEFAEGRPLRKSGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLE 660
            PHLNHLGSDLCRGILEFAEGRPLRKSGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLE
Sbjct: 601  PHLNHLGSDLCRGILEFAEGRPLRKSGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLE 660

Query: 661  DIFDSADKPLGGRRWWLNAEDPFQFLAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQ 720
            DIFDSADKPLGGRRWWLNAEDPFQFLAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQ
Sbjct: 661  DIFDSADKPLGGRRWWLNAEDPFQFLAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQ 720

Query: 721  HYAALGRDKLGAASVNLVAGEKPADVYSGIAARVQEILRRDAQKDPETFPDAMYAKKLID 780
            HYAALGRDKLGAASVNLVAGEKPADVYSGIAARVQEILRRDAQKDPETFPDAMYAKKLID
Sbjct: 721  HYAALGRDKLGAASVNLVAGEKPADVYSGIAARVQEILRRDAQKDPETFPDAMYAKKLID 780

Query: 781  QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKMTLEALGE 840
            QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKMTLEALGE
Sbjct: 781  QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKMTLEALGE 840

Query: 841  MFVAAREIMNWLSDCAKIIASKNESVRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRE 900
            MFVAAREIMNWLSDCAKIIASKNESVRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRE
Sbjct: 841  MFVAAREIMNWLSDCAKIIASKNESVRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRE 900

Query: 901  TDKILTSRQRTAFPPNFVHSLDSSHMMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRI 960
            TDKILTSRQRTAFPPNFVHSLDSSHMMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRI
Sbjct: 901  TDKILTSRQRTAFPPNFVHSLDSSHMMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRI 960

Query: 961  LRQKFVELYETP---KLLESFQQSFPALDFPPLPERGEFDLKE 976
            LRQKFVELYETP    LLESFQQSFPALDFPPLPERGEFDLKE
Sbjct: 961  LRQKFVELYETPILEDLLESFQQSFPALDFPPLPERGEFDLKE 1003

[Close]

BLAST of Pay0017264 vs. ExPASy TrEMBL
Match: A0A0A0KXM5 (DNA-directed RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_5G642180 PE=3 SV=1)

HSP 1 Score: 1788.9 bits (4632), Expect = 0.0e+00
Identity = 881/980 (89.90%), Postives = 924/980 (94.29%), Query Frame = 0


Query: 1   MISTSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKF 60
           MISTSMWKTIAKRGICRNRQFHPDWR  SRFNGVLGRPNESLFRDKLISGN VPSSLPKF
Sbjct: 1   MISTSMWKTIAKRGICRNRQFHPDWRWLSRFNGVLGRPNESLFRDKLISGNFVPSSLPKF 60

Query: 61  GFFQMGVGRNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASL 120
           G F+MGVGR++ILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDAS+
Sbjct: 61  GSFEMGVGRSEILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASV 120

Query: 121 DGEVQELLQEMSKEETRLKTVKGMPHSKYLMLRRRQVTVEAEAWEKAVKEYKELLEDMCK 180
           DG+VQE +QEMSKEE RLK VKGM   KY MLRRRQVT+EAEAWE A KEY+ELL DMCK
Sbjct: 121 DGKVQESVQEMSKEEKRLKPVKGMGQWKYNMLRRRQVTIEAEAWENAAKEYRELLVDMCK 180

Query: 181 QKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPADKMSVITMH 240
           QKLAPNLPYVKSLFLGWFEPFQ+AI KEQELIQ+GK+ RAPYAPYF+QLPADKMSVITMH
Sbjct: 181 QKLAPNLPYVKSLFLGWFEPFQDAIIKEQELIQEGKRSRAPYAPYFLQLPADKMSVITMH 240

Query: 241 KLMGMLMKGCEHGNIKVVVAACAIGDAIEQEVRIHKFLEKKKEKKHNKNNENNYQPDSQV 300
           KLMG+LM+G EHG+++VV AACAIGDAIEQEVRIHKFLEKKKE+ HNK+NENN QPD + 
Sbjct: 241 KLMGLLMRGSEHGSVRVVQAACAIGDAIEQEVRIHKFLEKKKERTHNKDNENNDQPDIER 300

Query: 301 KEQERLRKTVANLIKKKKHQAVGQIAKGTDDSRPWGREAKAKVGARLIELLIQTAYIQPP 360
           KEQERLRK V NLIKKKKH A GQIAK  DDSRPWGRE KAKVGARLIELLIQTAYIQPP
Sbjct: 301 KEQERLRKKVTNLIKKKKHLAAGQIAKRADDSRPWGRELKAKVGARLIELLIQTAYIQPP 360

Query: 361 ADQLADGPPDIRPAFWHSLKTVVTD--NSVGRLGVIECDPLVIKGLDRTARQIVIPYMPM 420
           ADQLADGPPD RPAF HSLKT V D  N +GRLGVIECDPLV+KGLD TARQIVIPYMPM
Sbjct: 361 ADQLADGPPDPRPAFVHSLKTSVKDGTNFMGRLGVIECDPLVVKGLDWTARQIVIPYMPM 420

Query: 421 LMPPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALDTLGNTKWRI 480
           LMPPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPK+QLTPVF+ALDTLGNTKWRI
Sbjct: 421 LMPPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKQQLTPVFEALDTLGNTKWRI 480

Query: 481 NKRILGVVERIWSSGGDLAGLVNRDDVPLPEKPDTEDETLIKKWKWEIRSVKKENMERHS 540
           NKRIL VVERIW+SGG LAGLV++DDVPLPEKPDTEDETLIKKWKWE+RSVKKENMERHS
Sbjct: 481 NKRILNVVERIWTSGGHLAGLVDQDDVPLPEKPDTEDETLIKKWKWEVRSVKKENMERHS 540

Query: 541 QRCDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPL 600
           QRCDIELKL VAR MKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGILEFAEGR L
Sbjct: 541 QRCDIELKLTVARKMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRSL 600

Query: 601 RKSGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLEDIFDSADKPLGGRRWWLNAEDPF 660
           RKSGL WLKIHLANLFAGGVDKLSHDGRMTF+ENHLEDIFDSAD+PL G RWW+NAEDPF
Sbjct: 601 RKSGLIWLKIHLANLFAGGVDKLSHDGRMTFIENHLEDIFDSADRPLEGGRWWMNAEDPF 660

Query: 661 QFLAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKP 720
           QFLAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDK GAA+VNLVAGEKP
Sbjct: 661 QFLAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKSGAAAVNLVAGEKP 720

Query: 721 ADVYSGIAARVQEILRRDAQKDPETFPDAMYAKKLIDQVDRKLVKQTVMTSVYGVTYIGA 780
           ADVYSGIAARV EIL+RDAQKDPETFPDA++AK LIDQVDRKLVKQTVMTSVYGVTYIGA
Sbjct: 721 ADVYSGIAARVLEILKRDAQKDPETFPDALHAKILIDQVDRKLVKQTVMTSVYGVTYIGA 780

Query: 781 RDQIKRRLKERAAISDDSELFGCSCYAAKMTLEALGEMFVAAREIMNWLSDCAKIIASKN 840
           RDQIKRRLKERAAISDDSELFGCSCYAAK+TLEALGEMFVAAREIMNWLSDCAKIIASKN
Sbjct: 781 RDQIKRRLKERAAISDDSELFGCSCYAAKITLEALGEMFVAAREIMNWLSDCAKIIASKN 840

Query: 841 ESVRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRETDKILTSRQRTAFPPNFVHSLDS 900
           E+VRWTTPLGLPVVQPYRKLG  +IKTSLQVLTLRRETDKIL+SRQRTAFPPNFVHSLDS
Sbjct: 841 ETVRWTTPLGLPVVQPYRKLGIHAIKTSLQVLTLRRETDKILSSRQRTAFPPNFVHSLDS 900

Query: 901 SHMMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRILRQKFVELYETP---KLLESFQQ 960
           SHMMMTA+AC RAGL FAGVHDSYWTHACDVDEMNRILR+KFVELYETP    LLESF+Q
Sbjct: 901 SHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLESFEQ 960

Query: 961 SFPALDFPPLPERGEFDLKE 976
           SFPALDFPPLPERGEF+LKE
Sbjct: 961 SFPALDFPPLPERGEFNLKE 980

[Close]

BLAST of Pay0017264 vs. ExPASy TrEMBL
Match: A0A6J1JUF5 (DNA-directed RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111489816 PE=3 SV=1)

HSP 1 Score: 1602.0 bits (4147), Expect = 0.0e+00
Identity = 786/989 (79.47%), Postives = 873/989 (88.27%), Query Frame = 0


Query: 1    MISTSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKF 60
            MISTSMWKTIAK+ I +NRQFH DW C SR +GV+GR NES+ R+KLIS   V SSLPKF
Sbjct: 32   MISTSMWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESIIREKLISDKFVLSSLPKF 91

Query: 61   GFFQMGVGRNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASL 120
            G  ++G+GR+++LSQ+D Y SRFCFGSMG RIGLNG CPKGYSSVAEAVSSTDVDED+S+
Sbjct: 92   GISELGIGRSEVLSQDD-YGSRFCFGSMGVRIGLNGSCPKGYSSVAEAVSSTDVDEDSSI 151

Query: 121  DGEVQELLQEMSKEETR--------LKTVKGMPHSKYLMLRRRQVTVEAEAWEKAVKEYK 180
            D E+QELLQEM KEE R        LK VKGM   KY ML+RRQV +E EAW++AVKEYK
Sbjct: 152  DEEIQELLQEMRKEEKRQVQRRRRGLKRVKGMGEEKYQMLKRRQVAIETEAWKQAVKEYK 211

Query: 181  ELLEDMCKQKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPAD 240
            ELL DMC+QKLAPNLPY+KSLFLGWFEP ++AI+KEQELI+ GK  R  YAPYF QL AD
Sbjct: 212  ELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKN-RTAYAPYFDQLSAD 271

Query: 241  KMSVITMHKLMGMLMKGCEHGNIKVVVAACAIGDAIEQEVRIHKFLEKKKEKKHNKNNEN 300
             MSV+TMHKLMG+LM G EHGN +VV AAC IGDAIEQEVRIH+FLEK K+KKH+K+NEN
Sbjct: 272  MMSVVTMHKLMGLLMMGHEHGNARVVQAACVIGDAIEQEVRIHRFLEKMKKKKHDKDNEN 331

Query: 301  NYQPDSQVKEQERLRKTVANLIKKKKHQAVGQIAKGTDDSRPWGREAKAKVGARLIELLI 360
            N +PDSQ+KEQERLRK V NLIK +K  AV  I KG DDS+PWG +AKAKVG+RLIELL 
Sbjct: 332  NDKPDSQLKEQERLRKKVTNLIKMQKLPAVRHIVKGADDSKPWGPDAKAKVGSRLIELLT 391

Query: 361  QTAYIQPPADQLADGPPDIRPAFWHSLKTVVTD---NSVGRLGVIECDPLVIKGLDRTAR 420
            QTAYIQPPADQLADGPPDIRPAF HS + V+ +   NS  R GVIECDPLV+KGL+RTAR
Sbjct: 392  QTAYIQPPADQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVKGLERTAR 451

Query: 421  QIVIPYMPMLMPPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALD 480
             +VIPYMPML+PPV W GYDKGGHI LPSF MRT GA QQR+A KRTPK+QLTPVF+ALD
Sbjct: 452  HMVIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEALD 511

Query: 481  TLGNTKWRINKRILGVVERIWSSGGDLAGLVNRDDVPLPEKPDTEDETLIKKWKWEIRSV 540
            TLGNTKWRINK+IL +V+RIW+SGG LA LV+RDDVPLPEKPD+EDETL++KWKW+++SV
Sbjct: 512  TLGNTKWRINKKILSIVDRIWTSGGCLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSV 571

Query: 541  KKENMERHSQRCDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGI 600
            KKEN+ERHSQRCDIELKLAVAR MKDEEGFY+PHN+DFRGRAYPMHP+LNHLGSDLCRGI
Sbjct: 572  KKENVERHSQRCDIELKLAVARKMKDEEGFYFPHNIDFRGRAYPMHPYLNHLGSDLCRGI 631

Query: 601  LEFAEGRPLRKSGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLEDIFDSADKPLGGRR 660
            LEFAEGRPLRKSGL WLKIHLANLFAGGVDKLSHDGR+TF+++H+EDIFDSAD+PL GRR
Sbjct: 632  LEFAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRITFIDDHVEDIFDSADRPLEGRR 691

Query: 661  WWLNAEDPFQFLAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKLGAAS 720
            WWLNAEDPFQFLAGCMNLTEALRSSSPET ISHIPIHQDGSCNGLQHYAALGRDKLGAA+
Sbjct: 692  WWLNAEDPFQFLAGCMNLTEALRSSSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAAA 751

Query: 721  VNLVAGEKPADVYSGIAARVQEILRRDAQKDPETFPDAMYAKKLIDQVDRKLVKQTVMTS 780
            VNL   EKPADVYSGIAARV EI+R+DAQ+DPETFPDA+ AK LIDQVDRKLVKQTVMTS
Sbjct: 752  VNLTVTEKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTS 811

Query: 781  VYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKMTLEALGEMFVAAREIMNWLSD 840
            VYGVTYIGARDQIKRRLKERAAISDD+ELFGC+CYAAK TL ALGEMF AAR IM+WL D
Sbjct: 812  VYGVTYIGARDQIKRRLKERAAISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLGD 871

Query: 841  CAKIIASKNESVRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRETDKILTSRQRTAFP 900
            CAKIIAS+N+ VRWTTPLGLPVVQPYRKLG   +KTSLQVLTL++ETDK+L  RQRTAFP
Sbjct: 872  CAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLVKTSLQVLTLQQETDKVLVKRQRTAFP 931

Query: 901  PNFVHSLDSSHMMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRILRQKFVELYETP-- 960
            PNFVHSLD SHMMMTA+AC +AGL FAGVHDSYWTHACDVDEMNRILR+KFVELYETP  
Sbjct: 932  PNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPIL 991

Query: 961  -KLLESFQQSFPALDFPPLPERGEFDLKE 976
              LLE FQQSFP LDFPPLPERGE DLKE
Sbjct: 992  ENLLEGFQQSFPVLDFPPLPERGELDLKE 1018

[Close]

BLAST of Pay0017264 vs. NCBI nr
Match: XP_008459412.1 (PREDICTED: DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial [Cucumis melo])

HSP 1 Score: 1974.9 bits (5115), Expect = 0.0e+00
Identity = 974/978 (99.59%), Postives = 974/978 (99.59%), Query Frame = 0


Query: 1   MISTSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKF 60
           MISTSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKF
Sbjct: 1   MISTSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKF 60

Query: 61  GFFQMGVGRNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASL 120
           GFFQMGVGRNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASL
Sbjct: 61  GFFQMGVGRNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASL 120

Query: 121 DGEVQELLQEMSKEETRLKTVKGMPHSKYLMLRRRQVTVEAEAWEKAVKEYKELLEDMCK 180
           DGEVQELLQEMSKEETRLKTVKGMPHSKYLMLRRRQVTVEAEAWEKAVKEYKELLEDMCK
Sbjct: 121 DGEVQELLQEMSKEETRLKTVKGMPHSKYLMLRRRQVTVEAEAWEKAVKEYKELLEDMCK 180

Query: 181 QKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPADKMSVITMH 240
           QKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPADKMSVITMH
Sbjct: 181 QKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPADKMSVITMH 240

Query: 241 KLMGMLMKGCEHGNIKVVVAACAIGDAIEQEVRIHKFLEKKKEKKHNKNNENNYQPDSQV 300
           KLMGMLMKGCEHGNIKVVVAACAIGDAIEQEVRIHKFLEKKKEKKHNKNNENNYQPDSQV
Sbjct: 241 KLMGMLMKGCEHGNIKVVVAACAIGDAIEQEVRIHKFLEKKKEKKHNKNNENNYQPDSQV 300

Query: 301 KEQERLRKTVANLIKKKKHQAVGQIAKGTDDSRPWGREAKAKVGARLIELLIQTAYIQPP 360
           KEQERLRKTVANLIKKKKHQAVGQIAKGTDDSRPWGREAKAKVGARLIELLIQTAYIQPP
Sbjct: 301 KEQERLRKTVANLIKKKKHQAVGQIAKGTDDSRPWGREAKAKVGARLIELLIQTAYIQPP 360

Query: 361 ADQLADGPPDIRPAFWHSLKTVVTDNSVGRLGVIECDPLVIKGLDRTARQIVIPYMPMLM 420
           ADQLADGPPDIRPAFWHSLKTVVTDNSVGRLGVIECDPLVIKGLDRTARQIVIPYMPMLM
Sbjct: 361 ADQLADGPPDIRPAFWHSLKTVVTDNSVGRLGVIECDPLVIKGLDRTARQIVIPYMPMLM 420

Query: 421 PPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALDTLGNTKWRINK 480
           PPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALDTLGNTKWRINK
Sbjct: 421 PPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALDTLGNTKWRINK 480

Query: 481 RILGVVERIWSSGGDLAGLVNRDDVPLPEKPDTEDETLIKKWKWEIRSVKKENMERHSQR 540
           RILGVVERIWSSGGDLAGLVNRDDVPLPEKPDTEDETLIKKWKWEIRSVKKENMERHSQR
Sbjct: 481 RILGVVERIWSSGGDLAGLVNRDDVPLPEKPDTEDETLIKKWKWEIRSVKKENMERHSQR 540

Query: 541 CDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLRK 600
           CDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLRK
Sbjct: 541 CDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLRK 600

Query: 601 SGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLEDIFDSADKPLGGRRWWLNAEDPFQF 660
           SGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLEDIFDSADKPLGGRRWWLNAEDPFQF
Sbjct: 601 SGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLEDIFDSADKPLGGRRWWLNAEDPFQF 660

Query: 661 LAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPAD 720
           LAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPAD
Sbjct: 661 LAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPAD 720

Query: 721 VYSGIAARVQEILRRDAQKDPETFPDAMYAKKLIDQVDRKLVKQTVMTSVYGVTYIGARD 780
           VYSGIAARVQEILRRDAQKDPETFPDAMYAKKLIDQVDRKLVKQTVMTSVYGVTYIGARD
Sbjct: 721 VYSGIAARVQEILRRDAQKDPETFPDAMYAKKLIDQVDRKLVKQTVMTSVYGVTYIGARD 780

Query: 781 QIKRRLKERAAISDDSELFGCSCYAAKMTLEALGEMFVAAREIMNWLSDCAKIIASKNES 840
           QIKRRLKERAAISDDSELFGCSCYAAKMTLEALGEMFVAAREIMNWLSDCAKIIASKNES
Sbjct: 781 QIKRRLKERAAISDDSELFGCSCYAAKMTLEALGEMFVAAREIMNWLSDCAKIIASKNES 840

Query: 841 VRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRETDKILTSRQRTAFPPNFVHSLDSSH 900
           VRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRETDKILTSRQRTAFPPNFVHSLDSSH
Sbjct: 841 VRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRETDKILTSRQRTAFPPNFVHSLDSSH 900

Query: 901 MMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRILRQKFVELYETP---KLLESFQQSF 960
           MMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRILRQKFVELYETP    LLESFQQSF
Sbjct: 901 MMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRILRQKFVELYETPILEDLLESFQQSF 960

Query: 961 PALDFPPLPERGEFDLKE 976
           PALDFPPLPERGEFDLKE
Sbjct: 961 PALDFPPLPERGEFDLKE 978

[Close]

BLAST of Pay0017264 vs. NCBI nr
Match: TYK00602.1 (DNA-directed RNA polymerase 2B [Cucumis melo var. makuwa])

HSP 1 Score: 1969.5 bits (5101), Expect = 0.0e+00
Identity = 972/983 (98.88%), Postives = 974/983 (99.08%), Query Frame = 0


Query: 1   MISTSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKF 60
           MISTSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKF
Sbjct: 1   MISTSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKF 60

Query: 61  GFFQMGVGRNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASL 120
           GFFQMGVGRNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASL
Sbjct: 61  GFFQMGVGRNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASL 120

Query: 121 DGEVQELLQEMSKEETRLKTVKGMPHSKYLMLRRRQVTVEAEAWEKAVKEYKELLEDMCK 180
           DGEVQELLQEMSKEETRLKTVKGMPHSKYLMLRRRQVTVEAEAWEKAVKEYKELLEDMCK
Sbjct: 121 DGEVQELLQEMSKEETRLKTVKGMPHSKYLMLRRRQVTVEAEAWEKAVKEYKELLEDMCK 180

Query: 181 QKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPADKMSVITMH 240
           QKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPADKMSVITMH
Sbjct: 181 QKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPADKMSVITMH 240

Query: 241 KLMGMLMKGCEHGNIKVVVAACAIGDAIEQEVRIHKFLEKKKEKKHNKNNENNYQPDSQV 300
           KLMGMLMKGCEHGNIKVVVAACAIGDAIEQEV+IHKFLEKKKEKKHNKNNENNYQPDSQV
Sbjct: 241 KLMGMLMKGCEHGNIKVVVAACAIGDAIEQEVKIHKFLEKKKEKKHNKNNENNYQPDSQV 300

Query: 301 KEQERLRKTVANLIKKKKHQAVGQIAKGTDDSRPWGREAKAKVGARLIELLIQTAYIQPP 360
           KEQERLRKTVANLIKKKKH+AV QIAKGTDDSRPWGREAKAKVGARLIELLIQTAYIQPP
Sbjct: 301 KEQERLRKTVANLIKKKKHRAVEQIAKGTDDSRPWGREAKAKVGARLIELLIQTAYIQPP 360

Query: 361 ADQLADGPPDIRPAFWHSLKTVVTDNSVGRLGVIECDPLVIKGLDRTARQIVIPYMPMLM 420
           ADQLADGPPDIRPAFWHSLKTVVTDNSVGRLGVIECDPLVIKGLDRTARQIVIPYMPMLM
Sbjct: 361 ADQLADGPPDIRPAFWHSLKTVVTDNSVGRLGVIECDPLVIKGLDRTARQIVIPYMPMLM 420

Query: 421 PPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALDTLGNTKWRINK 480
           PPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALDTLGNTKWRINK
Sbjct: 421 PPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALDTLGNTKWRINK 480

Query: 481 RILGVVERIWSSGGDLAGLVNRDDVPLPEKPDTEDETLIKKWKWEIRSVKKENMERHSQR 540
           RILGVVERIWSSGGDLAGLVNRDDVPLPEKPDTEDETLIKKWKWEIRSVKKENMERHSQR
Sbjct: 481 RILGVVERIWSSGGDLAGLVNRDDVPLPEKPDTEDETLIKKWKWEIRSVKKENMERHSQR 540

Query: 541 CDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLRK 600
           CDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLRK
Sbjct: 541 CDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLRK 600

Query: 601 SGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLEDIFDSADKPLGGRRWWLNAEDPFQF 660
           SGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLEDIFDSADKPLGGRRWWLNAEDPFQF
Sbjct: 601 SGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLEDIFDSADKPLGGRRWWLNAEDPFQF 660

Query: 661 LAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPAD 720
           LAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPAD
Sbjct: 661 LAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPAD 720

Query: 721 VYSGIAARVQEILRRDAQKDPETFPDAMYAKKLIDQVDRKLVKQTVMTSVYGVTYIGARD 780
           VYSGIAARVQEILRRDAQKDPETFPDAMYAKKLIDQVDRKLVKQTVMTSVYGVTYIGARD
Sbjct: 721 VYSGIAARVQEILRRDAQKDPETFPDAMYAKKLIDQVDRKLVKQTVMTSVYGVTYIGARD 780

Query: 781 QIKRRLKERAAISDDSELFGCSCYAAKMTLEALGEMFVAAREIMNWLSDCAKIIASKNES 840
           QIKRRLKERAAISDDSELFGCSCYAAKMTLEALGEMFVAAREIMNWLSDCAKIIASKNES
Sbjct: 781 QIKRRLKERAAISDDSELFGCSCYAAKMTLEALGEMFVAAREIMNWLSDCAKIIASKNES 840

Query: 841 VRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRETDKILTSRQRTAFPPNFVHSLDSSH 900
           VRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRETDKILTSRQRTAFPPNFVHSLDSSH
Sbjct: 841 VRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRETDKILTSRQRTAFPPNFVHSLDSSH 900

Query: 901 MMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRILRQKFVELYETP--------KLLES 960
           MMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRILRQKFVELYETP        KLLES
Sbjct: 901 MMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRILRQKFVELYETPILEDPREKKLLES 960

Query: 961 FQQSFPALDFPPLPERGEFDLKE 976
           FQQSFPALDFPPLPERGEFDLKE
Sbjct: 961 FQQSFPALDFPPLPERGEFDLKE 983

[Close]

BLAST of Pay0017264 vs. NCBI nr
Match: KAA0039415.1 (DNA-directed RNA polymerase 2B [Cucumis melo var. makuwa])

HSP 1 Score: 1955.3 bits (5064), Expect = 0.0e+00
Identity = 971/1003 (96.81%), Postives = 973/1003 (97.01%), Query Frame = 0


Query: 1    MISTSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKF 60
            MISTSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKF
Sbjct: 1    MISTSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKF 60

Query: 61   GFFQMGVGRNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASL 120
            GFFQMGVGRNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASL
Sbjct: 61   GFFQMGVGRNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASL 120

Query: 121  DGEVQELLQEMSKEETRLKTVKGMPHSKYLMLRRRQVTVEAEAWEKAVKEYKELLEDMCK 180
            DGEVQELLQEMSKEETRLKTVKGMPHSKYLMLRRRQVTVEAEAWEKAVKEYKELLEDMCK
Sbjct: 121  DGEVQELLQEMSKEETRLKTVKGMPHSKYLMLRRRQVTVEAEAWEKAVKEYKELLEDMCK 180

Query: 181  QKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPADKMSVITMH 240
            QKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPADKMSVITMH
Sbjct: 181  QKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPADKMSVITMH 240

Query: 241  KLMGMLMKGCEHGNIKVVVAACAIGDAIEQEVRIHKFLEKKKEKKHNKNNENNYQPDSQV 300
            KLMGMLMKGCEHGNIKVVVAACAIGDAIEQEV+IHKFLEKKKEKKHNKNNENNYQPDSQV
Sbjct: 241  KLMGMLMKGCEHGNIKVVVAACAIGDAIEQEVKIHKFLEKKKEKKHNKNNENNYQPDSQV 300

Query: 301  KEQERLRKTVANLIKKKKHQAVGQIAKGTDDSRPWGREAKAKVGARLIELLIQTAYIQPP 360
            KEQERLRKTVANLIKKKKH+AV QIAKGTDDSRPWGREAKAKVGARLIELLIQTAYIQPP
Sbjct: 301  KEQERLRKTVANLIKKKKHRAVEQIAKGTDDSRPWGREAKAKVGARLIELLIQTAYIQPP 360

Query: 361  ADQLADGPPDIRPAFWHSLKTVVTDNSVGRLGVIECDPLVIKGLDRTARQIVIPYMPMLM 420
            ADQLADGPPDIRPAFWHSLKTVVTDNSVGRLGVIECDPLVIKGLDRTARQIVIPYMPMLM
Sbjct: 361  ADQLADGPPDIRPAFWHSLKTVVTDNSVGRLGVIECDPLVIKGLDRTARQIVIPYMPMLM 420

Query: 421  PPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALDTLGNTKWRINK 480
            PPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALDTLGNTKWRINK
Sbjct: 421  PPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALDTLGNTKWRINK 480

Query: 481  RILGVVERIWSSGGDLAGLVNRDD-------------------------VPLPEKPDTED 540
            RILGVVERIWSSGGDLAGLVNRDD                         VPLPEKPDTED
Sbjct: 481  RILGVVERIWSSGGDLAGLVNRDDVSGFMSSFFLQLLLILILLWFFPFQVPLPEKPDTED 540

Query: 541  ETLIKKWKWEIRSVKKENMERHSQRCDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMH 600
            ETLIKKWKWEIRSVKKENMERHSQRCDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMH
Sbjct: 541  ETLIKKWKWEIRSVKKENMERHSQRCDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMH 600

Query: 601  PHLNHLGSDLCRGILEFAEGRPLRKSGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLE 660
            PHLNHLGSDLCRGILEFAEGRPLRKSGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLE
Sbjct: 601  PHLNHLGSDLCRGILEFAEGRPLRKSGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLE 660

Query: 661  DIFDSADKPLGGRRWWLNAEDPFQFLAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQ 720
            DIFDSADKPLGGRRWWLNAEDPFQFLAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQ
Sbjct: 661  DIFDSADKPLGGRRWWLNAEDPFQFLAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQ 720

Query: 721  HYAALGRDKLGAASVNLVAGEKPADVYSGIAARVQEILRRDAQKDPETFPDAMYAKKLID 780
            HYAALGRDKLGAASVNLVAGEKPADVYSGIAARVQEILRRDAQKDPETFPDAMYAKKLID
Sbjct: 721  HYAALGRDKLGAASVNLVAGEKPADVYSGIAARVQEILRRDAQKDPETFPDAMYAKKLID 780

Query: 781  QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKMTLEALGE 840
            QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKMTLEALGE
Sbjct: 781  QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKMTLEALGE 840

Query: 841  MFVAAREIMNWLSDCAKIIASKNESVRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRE 900
            MFVAAREIMNWLSDCAKIIASKNESVRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRE
Sbjct: 841  MFVAAREIMNWLSDCAKIIASKNESVRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRE 900

Query: 901  TDKILTSRQRTAFPPNFVHSLDSSHMMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRI 960
            TDKILTSRQRTAFPPNFVHSLDSSHMMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRI
Sbjct: 901  TDKILTSRQRTAFPPNFVHSLDSSHMMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRI 960

Query: 961  LRQKFVELYETP---KLLESFQQSFPALDFPPLPERGEFDLKE 976
            LRQKFVELYETP    LLESFQQSFPALDFPPLPERGEFDLKE
Sbjct: 961  LRQKFVELYETPILEDLLESFQQSFPALDFPPLPERGEFDLKE 1003

[Close]

BLAST of Pay0017264 vs. NCBI nr
Match: XP_004141596.2 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial [Cucumis sativus] >KGN52536.1 hypothetical protein Csa_008614 [Cucumis sativus])

HSP 1 Score: 1788.9 bits (4632), Expect = 0.0e+00
Identity = 881/980 (89.90%), Postives = 924/980 (94.29%), Query Frame = 0


Query: 1   MISTSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKF 60
           MISTSMWKTIAKRGICRNRQFHPDWR  SRFNGVLGRPNESLFRDKLISGN VPSSLPKF
Sbjct: 1   MISTSMWKTIAKRGICRNRQFHPDWRWLSRFNGVLGRPNESLFRDKLISGNFVPSSLPKF 60

Query: 61  GFFQMGVGRNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASL 120
           G F+MGVGR++ILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDAS+
Sbjct: 61  GSFEMGVGRSEILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASV 120

Query: 121 DGEVQELLQEMSKEETRLKTVKGMPHSKYLMLRRRQVTVEAEAWEKAVKEYKELLEDMCK 180
           DG+VQE +QEMSKEE RLK VKGM   KY MLRRRQVT+EAEAWE A KEY+ELL DMCK
Sbjct: 121 DGKVQESVQEMSKEEKRLKPVKGMGQWKYNMLRRRQVTIEAEAWENAAKEYRELLVDMCK 180

Query: 181 QKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPADKMSVITMH 240
           QKLAPNLPYVKSLFLGWFEPFQ+AI KEQELIQ+GK+ RAPYAPYF+QLPADKMSVITMH
Sbjct: 181 QKLAPNLPYVKSLFLGWFEPFQDAIIKEQELIQEGKRSRAPYAPYFLQLPADKMSVITMH 240

Query: 241 KLMGMLMKGCEHGNIKVVVAACAIGDAIEQEVRIHKFLEKKKEKKHNKNNENNYQPDSQV 300
           KLMG+LM+G EHG+++VV AACAIGDAIEQEVRIHKFLEKKKE+ HNK+NENN QPD + 
Sbjct: 241 KLMGLLMRGSEHGSVRVVQAACAIGDAIEQEVRIHKFLEKKKERTHNKDNENNDQPDIER 300

Query: 301 KEQERLRKTVANLIKKKKHQAVGQIAKGTDDSRPWGREAKAKVGARLIELLIQTAYIQPP 360
           KEQERLRK V NLIKKKKH A GQIAK  DDSRPWGRE KAKVGARLIELLIQTAYIQPP
Sbjct: 301 KEQERLRKKVTNLIKKKKHLAAGQIAKRADDSRPWGRELKAKVGARLIELLIQTAYIQPP 360

Query: 361 ADQLADGPPDIRPAFWHSLKTVVTD--NSVGRLGVIECDPLVIKGLDRTARQIVIPYMPM 420
           ADQLADGPPD RPAF HSLKT V D  N +GRLGVIECDPLV+KGLD TARQIVIPYMPM
Sbjct: 361 ADQLADGPPDPRPAFVHSLKTSVKDGTNFMGRLGVIECDPLVVKGLDWTARQIVIPYMPM 420

Query: 421 LMPPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALDTLGNTKWRI 480
           LMPPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPK+QLTPVF+ALDTLGNTKWRI
Sbjct: 421 LMPPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKQQLTPVFEALDTLGNTKWRI 480

Query: 481 NKRILGVVERIWSSGGDLAGLVNRDDVPLPEKPDTEDETLIKKWKWEIRSVKKENMERHS 540
           NKRIL VVERIW+SGG LAGLV++DDVPLPEKPDTEDETLIKKWKWE+RSVKKENMERHS
Sbjct: 481 NKRILNVVERIWTSGGHLAGLVDQDDVPLPEKPDTEDETLIKKWKWEVRSVKKENMERHS 540

Query: 541 QRCDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPL 600
           QRCDIELKL VAR MKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGILEFAEGR L
Sbjct: 541 QRCDIELKLTVARKMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRSL 600

Query: 601 RKSGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLEDIFDSADKPLGGRRWWLNAEDPF 660
           RKSGL WLKIHLANLFAGGVDKLSHDGRMTF+ENHLEDIFDSAD+PL G RWW+NAEDPF
Sbjct: 601 RKSGLIWLKIHLANLFAGGVDKLSHDGRMTFIENHLEDIFDSADRPLEGGRWWMNAEDPF 660

Query: 661 QFLAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKP 720
           QFLAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDK GAA+VNLVAGEKP
Sbjct: 661 QFLAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKSGAAAVNLVAGEKP 720

Query: 721 ADVYSGIAARVQEILRRDAQKDPETFPDAMYAKKLIDQVDRKLVKQTVMTSVYGVTYIGA 780
           ADVYSGIAARV EIL+RDAQKDPETFPDA++AK LIDQVDRKLVKQTVMTSVYGVTYIGA
Sbjct: 721 ADVYSGIAARVLEILKRDAQKDPETFPDALHAKILIDQVDRKLVKQTVMTSVYGVTYIGA 780

Query: 781 RDQIKRRLKERAAISDDSELFGCSCYAAKMTLEALGEMFVAAREIMNWLSDCAKIIASKN 840
           RDQIKRRLKERAAISDDSELFGCSCYAAK+TLEALGEMFVAAREIMNWLSDCAKIIASKN
Sbjct: 781 RDQIKRRLKERAAISDDSELFGCSCYAAKITLEALGEMFVAAREIMNWLSDCAKIIASKN 840

Query: 841 ESVRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRETDKILTSRQRTAFPPNFVHSLDS 900
           E+VRWTTPLGLPVVQPYRKLG  +IKTSLQVLTLRRETDKIL+SRQRTAFPPNFVHSLDS
Sbjct: 841 ETVRWTTPLGLPVVQPYRKLGIHAIKTSLQVLTLRRETDKILSSRQRTAFPPNFVHSLDS 900

Query: 901 SHMMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRILRQKFVELYETP---KLLESFQQ 960
           SHMMMTA+AC RAGL FAGVHDSYWTHACDVDEMNRILR+KFVELYETP    LLESF+Q
Sbjct: 901 SHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLESFEQ 960

Query: 961 SFPALDFPPLPERGEFDLKE 976
           SFPALDFPPLPERGEF+LKE
Sbjct: 961 SFPALDFPPLPERGEFNLKE 980

[Close]

BLAST of Pay0017264 vs. NCBI nr
Match: XP_038890080.1 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like isoform X1 [Benincasa hispida])

HSP 1 Score: 1638.2 bits (4241), Expect = 0.0e+00
Identity = 811/990 (81.92%), Postives = 880/990 (88.89%), Query Frame = 0


Query: 1    MISTSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKF 60
            MISTSMWKT+AK+ ICRNRQFH  W CFS  +GVLGRPNESLFR+KLISGN V SSLPKF
Sbjct: 32   MISTSMWKTLAKQAICRNRQFHLGWHCFSCSSGVLGRPNESLFREKLISGNFVLSSLPKF 91

Query: 61   GFFQMGVGRNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASL 120
            G ++MG+GRN++LSQED Y SR CFGSMGARIGLNG C KGYSSVAEAVSSTDVDEDAS+
Sbjct: 92   GSWEMGIGRNEVLSQED-YGSRLCFGSMGARIGLNGSCSKGYSSVAEAVSSTDVDEDASV 151

Query: 121  DGEVQELLQEMSKEE---------TRLKTVKGMPHSKYLMLRRRQVTVEAEAWEKAVKEY 180
            D E+QELLQEMSKEE          R+K VKGM   KY MLRRRQV +E EAWE+AVKEY
Sbjct: 152  DNEIQELLQEMSKEEKRQVTCSWRRRMKMVKGMGAGKYQMLRRRQVAIETEAWEQAVKEY 211

Query: 181  KELLEDMCKQKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPA 240
            KELL DMC+QKLAP LPY+KSLFLGWFEP  +AI+KEQELI++GK  R PYAPYF QLPA
Sbjct: 212  KELLMDMCEQKLAPTLPYMKSLFLGWFEPLCDAISKEQELIRQGKN-RTPYAPYFDQLPA 271

Query: 241  DKMSVITMHKLMGMLMKGCEHGNIKVVVAACAIGDAIEQEVRIHKFLEKKKEKKHNKNNE 300
            D MSVITMHKLMG+LM G E GN +VV AAC IGDAIEQEVRIHKFLEKKK+K H+K+NE
Sbjct: 272  DMMSVITMHKLMGLLMMGHERGNTRVVQAACVIGDAIEQEVRIHKFLEKKKKKTHDKDNE 331

Query: 301  NNYQPDSQVKEQERLRKTVANLIKKKKHQAVGQIAKGTDDSRPWGREAKAKVGARLIELL 360
            NN QPDSQ+KE E LR+ V+NLIKK+K  AV QI KGTDDSRPWG++AKAKVG+RLIELL
Sbjct: 332  NNDQPDSQMKEHEGLRQKVSNLIKKQKLPAVRQILKGTDDSRPWGQDAKAKVGSRLIELL 391

Query: 361  IQTAYIQPPADQLADGPPDIRPAFWHSLKTVV---TDNSVGRLGVIECDPLVIKGLDRTA 420
             QTAYIQPPADQLADGPPDIRPAF HSL+TV+   T NS  R GVIECDPLV+KGL+RTA
Sbjct: 392  TQTAYIQPPADQLADGPPDIRPAFRHSLRTVMKKATKNSGRRYGVIECDPLVVKGLERTA 451

Query: 421  RQIVIPYMPMLMPPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQAL 480
            R IVIPYMPML+PPV W GYDKGGHI LPSF MRTHGAKQQR+A KR PK+QL PVF+AL
Sbjct: 452  RHIVIPYMPMLVPPVNWTGYDKGGHIFLPSFVMRTHGAKQQREAVKRAPKQQLAPVFEAL 511

Query: 481  DTLGNTKWRINKRILGVVERIWSSGGDLAGLVNRDDVPLPEKPDTEDETLIKKWKWEIRS 540
            DTLG+TKWRIN +IL VV+RIW+SGG LA LV+RDDVP PEKPD+EDE L++KWKW+++S
Sbjct: 512  DTLGSTKWRINVKILSVVDRIWTSGGRLADLVDRDDVPFPEKPDSEDEVLLRKWKWKVKS 571

Query: 541  VKKENMERHSQRCDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRG 600
            VKKENMERHSQRCDIELKLAVA  MKDEEGFYYPHN+DFRGRAYPMHP+LNHLGSDLCRG
Sbjct: 572  VKKENMERHSQRCDIELKLAVAGKMKDEEGFYYPHNIDFRGRAYPMHPYLNHLGSDLCRG 631

Query: 601  ILEFAEGRPLRKSGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLEDIFDSADKPLGGR 660
            ILEFAEGRPLRKSGL WLKIHLANLFAGGVDKLSHDGRMTF+ENHLEDIFDSAD+PL GR
Sbjct: 632  ILEFAEGRPLRKSGLGWLKIHLANLFAGGVDKLSHDGRMTFIENHLEDIFDSADRPLEGR 691

Query: 661  RWWLNAEDPFQFLAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKLGAA 720
            RWWLNAEDPFQFLA CMNLTEALRSSSPET+ISHIPIHQDGSCNGLQHYAALGRDKLGAA
Sbjct: 692  RWWLNAEDPFQFLAACMNLTEALRSSSPETFISHIPIHQDGSCNGLQHYAALGRDKLGAA 751

Query: 721  SVNLVAGEKPADVYSGIAARVQEILRRDAQKDPETFPDAMYAKKLIDQVDRKLVKQTVMT 780
            +VNLVAGEKPADVY GIAARV EI+RRDAQKDP TFPDA+ AK LIDQVDRKLVKQTVMT
Sbjct: 752  AVNLVAGEKPADVYLGIAARVLEIMRRDAQKDPATFPDALRAKTLIDQVDRKLVKQTVMT 811

Query: 781  SVYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKMTLEALGEMFVAAREIMNWLS 840
            SVYGVTYIGARDQIKRRLKERAAISDDS+LFGCSCYAAK T+ ALGEMF AAR IMNWL 
Sbjct: 812  SVYGVTYIGARDQIKRRLKERAAISDDSDLFGCSCYAAKTTMTALGEMFEAARGIMNWLG 871

Query: 841  DCAKIIASKNESVRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRETDKILTSRQRTAF 900
            DCAKIIAS+N+ VRWTTP+GLPVVQPYRKLG   IKTSLQVLTLRRETDK+LT RQRTAF
Sbjct: 872  DCAKIIASENQPVRWTTPIGLPVVQPYRKLGEHHIKTSLQVLTLRRETDKVLTRRQRTAF 931

Query: 901  PPNFVHSLDSSHMMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRILRQKFVELYETP- 960
            PPNFVHSLD SHMMMTA+AC +AGL FAGVHDSYWTHACDVDEMNRILR+KFVELYETP 
Sbjct: 932  PPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPI 991

Query: 961  --KLLESFQQSFPALDFPPLPERGEFDLKE 976
               LLE FQ+SFP L FPPLPE GEFDLKE
Sbjct: 992  LENLLEGFQRSFPGLVFPPLPELGEFDLKE 1019

[Close]

BLAST of Pay0017264 vs. TAIR 10
Match: AT5G15700.2 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 1230.3 bits (3182), Expect = 0.0e+00
Identity = 628/999 (62.86%), Postives = 762/999 (76.28%), Query Frame = 0


Query: 3    STSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKFGF 62
            S  MW+ IAK+ I R+          S+  G+L    ES+F   L          P  G 
Sbjct: 37   SFPMWRNIAKQAISRSA---ARLNVSSQTRGLLVSSPESIFSKNL------SFRFPVLGS 96

Query: 63   FQMGVG---RNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVA-EAVSSTDVDEDA 122
               G G    + I  +E++ +S  C         L+G   +GY+SVA E V STDV+E+ 
Sbjct: 97   PCHGKGFRCLSGITRREEFSKSERC---------LSGTLARGYTSVAEEEVLSTDVEEEP 156

Query: 123  SLDGEVQELLQEMSKEETRLKTVK-----GMPHSKYLMLRRRQVTVEAEAWEKAVKEYKE 182
             +D  ++E+ +E  +E  R   +K     GM  +K+  L RRQV +E E WE+A  EY E
Sbjct: 157  EVDELLKEMKKEKKRESHRSWRMKKQDQFGMGRTKFQNLWRRQVKIETEEWERAAAEYME 216

Query: 183  LLEDMCKQKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPADK 242
            LL DMC+QKLAPNLPYVKSLFLGWFEP ++AI K+QEL + GK  +A YA Y  QLPADK
Sbjct: 217  LLTDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAKDQELYRLGKS-KATYAHYLDQLPADK 276

Query: 243  MSVITMHKLMGMLMKGCEHGNIKVVVAACAIGDAIEQEVRIHKFLEKKKEKKHNKNNENN 302
            +SVITMHKLMG LM G ++G +KVV AAC +GDAIEQE+RI  FL+KKK+   N+ +   
Sbjct: 277  ISVITMHKLMGHLMTGGDNGCVKVVHAACTVGDAIEQEIRICTFLDKKKKGDDNEES-GG 336

Query: 303  YQPDSQVKEQERLRKTVANLIKKKKHQAVGQIAKGTDDSRPWGREAKAKVGARLIELLIQ 362
             + ++ +KEQ++LRK V  LIKK+K  AV +I +  D ++PW  + +AKVG+RLIELL++
Sbjct: 337  VENETSMKEQDKLRKKVNELIKKQKLSAVRKILQSHDYTKPWIADVRAKVGSRLIELLVR 396

Query: 363  TAYIQPPADQLADGPPDIRPAFWHSLKTVVTDNSVGR-LGVIECDPLVIKGLDRTARQIV 422
            TAYIQ PADQ  +  PD+RPAF H+ K      + GR  GVIECDPLV KGL+++ R  V
Sbjct: 397  TAYIQSPADQQDNDLPDVRPAFVHTFKVAKGSMNSGRKYGVIECDPLVRKGLEKSGRYAV 456

Query: 423  IPYMPMLMPPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALDTLG 482
            +PYMPML+PP+KW GYDKG ++ L S+ M+THGAKQQR+A K  PK QL PVF+ALDTLG
Sbjct: 457  MPYMPMLVPPLKWSGYDKGAYLFLTSYIMKTHGAKQQREALKSAPKGQLQPVFEALDTLG 516

Query: 483  NTKWRINKRILGVVERIWSSGGDLAGLVNRDDVPLPEKPDTEDETLIKKWKWEIRSVKKE 542
            +TKWR+NKR+L VV+RIWSSGG +A +V+R DVPLPEKPDTEDE ++KKWKWE++S KK 
Sbjct: 517  STKWRVNKRVLTVVDRIWSSGGCVADMVDRSDVPLPEKPDTEDEGILKKWKWEVKSAKKV 576

Query: 543  NMERHSQRCDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGILEF 602
            N ERHSQRCD ELKL+VAR MKDEE FYYPHN+DFRGRAYPM PHLNHLGSDLCRG+LEF
Sbjct: 577  NSERHSQRCDTELKLSVARKMKDEEAFYYPHNMDFRGRAYPMPPHLNHLGSDLCRGVLEF 636

Query: 603  AEGRPLRKSGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLEDIFDSADKPLGGRRWWL 662
            AEGRP+  SGL WLKIHLANL+AGGVDKLS DGR+ F ENHL+DIFDSAD+PL G RWWL
Sbjct: 637  AEGRPMGISGLRWLKIHLANLYAGGVDKLSLDGRLAFTENHLDDIFDSADRPLEGSRWWL 696

Query: 663  NAEDPFQFLAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKLGAASVNL 722
             AEDPFQ LA C++LTEALRS SPET +SHIPIHQDGSCNGLQHYAALGRD LGA +VNL
Sbjct: 697  QAEDPFQCLAVCISLTEALRSPSPETVLSHIPIHQDGSCNGLQHYAALGRDTLGAEAVNL 756

Query: 723  VAGEKPADVYSGIAARVQEILRRDAQKDPETFPDAMYAKKLIDQVDRKLVKQTVMTSVYG 782
            VAGEKPADVYSGIA RV +I+RRDA +DPE FP+A+ A+KL++QVDRKLVKQTVMTSVYG
Sbjct: 757  VAGEKPADVYSGIATRVLDIMRRDADRDPEVFPEALRARKLLNQVDRKLVKQTVMTSVYG 816

Query: 783  VTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKMTLEALGEMFVAAREIMNWLSDCAK 842
            VTYIGARDQIKRRLKER+   D+ E+FG +CYAAK+TL A+ EMF AAR IM W  +CAK
Sbjct: 817  VTYIGARDQIKRRLKERSDFGDEKEVFGAACYAAKVTLAAIDEMFQAARAIMRWFGECAK 876

Query: 843  IIASKNESVRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRETDKILTSRQRTAFPPNF 902
            IIAS+NE+VRWTTPLGLPVVQPY ++G   +KTSLQ L+L+ ETD+++  RQRTAFPPNF
Sbjct: 877  IIASENETVRWTTPLGLPVVQPYHQMGTKLVKTSLQTLSLQHETDQVIVRRQRTAFPPNF 936

Query: 903  VHSLDSSHMMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRILRQKFVELYETP---KL 962
            +HSLD SHMMMTA+AC RAG+ FAGVHDS+WTHACDVD++N ILR+KFVELY  P    L
Sbjct: 937  IHSLDGSHMMMTAVACKRAGVCFAGVHDSFWTHACDVDKLNIILREKFVELYSQPILENL 996

Query: 963  LESFQQSFPALDFPPLPERGEFDLK----ETHRVESFVL 985
            LESF+QSFP LDFPPLPERG+ DLK     T R+E +VL
Sbjct: 997  LESFEQSFPHLDFPPLPERGDLDLKVNIVSTPRLELYVL 1015

[Close]

BLAST of Pay0017264 vs. TAIR 10
Match: AT5G15700.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 1226.5 bits (3172), Expect = 0.0e+00
Identity = 623/985 (63.25%), Postives = 755/985 (76.65%), Query Frame = 0


Query: 3    STSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKFGF 62
            S  MW+ IAK+ I R+          S+  G+L    ES+F   L          P  G 
Sbjct: 37   SFPMWRNIAKQAISRSA---ARLNVSSQTRGLLVSSPESIFSKNL------SFRFPVLGS 96

Query: 63   FQMGVG---RNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVA-EAVSSTDVDEDA 122
               G G    + I  +E++ +S  C         L+G   +GY+SVA E V STDV+E+ 
Sbjct: 97   PCHGKGFRCLSGITRREEFSKSERC---------LSGTLARGYTSVAEEEVLSTDVEEEP 156

Query: 123  SLDGEVQELLQEMSKEETRLKTVK-----GMPHSKYLMLRRRQVTVEAEAWEKAVKEYKE 182
             +D  ++E+ +E  +E  R   +K     GM  +K+  L RRQV +E E WE+A  EY E
Sbjct: 157  EVDELLKEMKKEKKRESHRSWRMKKQDQFGMGRTKFQNLWRRQVKIETEEWERAAAEYME 216

Query: 183  LLEDMCKQKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPADK 242
            LL DMC+QKLAPNLPYVKSLFLGWFEP ++AI K+QEL + GK  +A YA Y  QLPADK
Sbjct: 217  LLTDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAKDQELYRLGKS-KATYAHYLDQLPADK 276

Query: 243  MSVITMHKLMGMLMKGCEHGNIKVVVAACAIGDAIEQEVRIHKFLEKKKEKKHNKNNENN 302
            +SVITMHKLMG LM G ++G +KVV AAC +GDAIEQE+RI  FL+KKK+   N+ +   
Sbjct: 277  ISVITMHKLMGHLMTGGDNGCVKVVHAACTVGDAIEQEIRICTFLDKKKKGDDNEES-GG 336

Query: 303  YQPDSQVKEQERLRKTVANLIKKKKHQAVGQIAKGTDDSRPWGREAKAKVGARLIELLIQ 362
             + ++ +KEQ++LRK V  LIKK+K  AV +I +  D ++PW  + +AKVG+RLIELL++
Sbjct: 337  VENETSMKEQDKLRKKVNELIKKQKLSAVRKILQSHDYTKPWIADVRAKVGSRLIELLVR 396

Query: 363  TAYIQPPADQLADGPPDIRPAFWHSLKTVVTDNSVGR-LGVIECDPLVIKGLDRTARQIV 422
            TAYIQ PADQ  +  PD+RPAF H+ K      + GR  GVIECDPLV KGL+++ R  V
Sbjct: 397  TAYIQSPADQQDNDLPDVRPAFVHTFKVAKGSMNSGRKYGVIECDPLVRKGLEKSGRYAV 456

Query: 423  IPYMPMLMPPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALDTLG 482
            +PYMPML+PP+KW GYDKG ++ L S+ M+THGAKQQR+A K  PK QL PVF+ALDTLG
Sbjct: 457  MPYMPMLVPPLKWSGYDKGAYLFLTSYIMKTHGAKQQREALKSAPKGQLQPVFEALDTLG 516

Query: 483  NTKWRINKRILGVVERIWSSGGDLAGLVNRDDVPLPEKPDTEDETLIKKWKWEIRSVKKE 542
            +TKWR+NKR+L VV+RIWSSGG +A +V+R DVPLPEKPDTEDE ++KKWKWE++S KK 
Sbjct: 517  STKWRVNKRVLTVVDRIWSSGGCVADMVDRSDVPLPEKPDTEDEGILKKWKWEVKSAKKV 576

Query: 543  NMERHSQRCDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGILEF 602
            N ERHSQRCD ELKL+VAR MKDEE FYYPHN+DFRGRAYPM PHLNHLGSDLCRG+LEF
Sbjct: 577  NSERHSQRCDTELKLSVARKMKDEEAFYYPHNMDFRGRAYPMPPHLNHLGSDLCRGVLEF 636

Query: 603  AEGRPLRKSGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLEDIFDSADKPLGGRRWWL 662
            AEGRP+  SGL WLKIHLANL+AGGVDKLS DGR+ F ENHL+DIFDSAD+PL G RWWL
Sbjct: 637  AEGRPMGISGLRWLKIHLANLYAGGVDKLSLDGRLAFTENHLDDIFDSADRPLEGSRWWL 696

Query: 663  NAEDPFQFLAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKLGAASVNL 722
             AEDPFQ LA C++LTEALRS SPET +SHIPIHQDGSCNGLQHYAALGRD LGA +VNL
Sbjct: 697  QAEDPFQCLAVCISLTEALRSPSPETVLSHIPIHQDGSCNGLQHYAALGRDTLGAEAVNL 756

Query: 723  VAGEKPADVYSGIAARVQEILRRDAQKDPETFPDAMYAKKLIDQVDRKLVKQTVMTSVYG 782
            VAGEKPADVYSGIA RV +I+RRDA +DPE FP+A+ A+KL++QVDRKLVKQTVMTSVYG
Sbjct: 757  VAGEKPADVYSGIATRVLDIMRRDADRDPEVFPEALRARKLLNQVDRKLVKQTVMTSVYG 816

Query: 783  VTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKMTLEALGEMFVAAREIMNWLSDCAK 842
            VTYIGARDQIKRRLKER+   D+ E+FG +CYAAK+TL A+ EMF AAR IM W  +CAK
Sbjct: 817  VTYIGARDQIKRRLKERSDFGDEKEVFGAACYAAKVTLAAIDEMFQAARAIMRWFGECAK 876

Query: 843  IIASKNESVRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRETDKILTSRQRTAFPPNF 902
            IIAS+NE+VRWTTPLGLPVVQPY ++G   +KTSLQ L+L+ ETD+++  RQRTAFPPNF
Sbjct: 877  IIASENETVRWTTPLGLPVVQPYHQMGTKLVKTSLQTLSLQHETDQVIVRRQRTAFPPNF 936

Query: 903  VHSLDSSHMMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRILRQKFVELYETP---KL 962
            +HSLD SHMMMTA+AC RAG+ FAGVHDS+WTHACDVD++N ILR+KFVELY  P    L
Sbjct: 937  IHSLDGSHMMMTAVACKRAGVCFAGVHDSFWTHACDVDKLNIILREKFVELYSQPILENL 996

Query: 963  LESFQQSFPALDFPPLPERGEFDLK 975
            LESF+QSFP LDFPPLPERG+ DLK
Sbjct: 997  LESFEQSFPHLDFPPLPERGDLDLK 1001

[Close]

BLAST of Pay0017264 vs. TAIR 10
Match: AT1G68990.1 (male gametophyte defective 3 )

HSP 1 Score: 1190.3 bits (3078), Expect = 0.0e+00
Identity = 581/898 (64.70%), Postives = 710/898 (79.06%), Query Frame = 0


Query: 100 KGYSSVAEAVSSTDVDEDASLDGEVQELLQEMSKEETRL------------KTVKGMPHS 159
           +GY++ A+A+ STD ++++S   EV EL+ EM KE  R+            + + GM   
Sbjct: 71  EGYATAAQAIDSTDPEDESSGSDEVNELITEMEKETERIRKKARLAAIPPKRVIAGMGAQ 130

Query: 160 KYLMLRRRQVTVEAEAWEKAVKEYKELLEDMCKQKLAPNLPYVKSLFLGWFEPFQEAINK 219
           K+ ML++RQV +E E WE+A +E +E+L DMC+QKLAPNLPY+KSLFLGWFEP + AI  
Sbjct: 131 KFYMLKQRQVKMETEEWERAARECREILADMCEQKLAPNLPYMKSLFLGWFEPVRNAIQD 190

Query: 220 EQELIQKGKKPRAPYAPYFVQLPADKMSVITMHKLMGMLMKGCEH-GNIKVVVAACAIGD 279
           + +   K KK + PYAP+  QLPADKM+VITMHK+MG+LM   E  G +K+V AA  IG+
Sbjct: 191 DLDTF-KIKKGKIPYAPFMEQLPADKMAVITMHKMMGLLMTNAEGVGIVKLVNAATQIGE 250

Query: 280 AIEQEVRIHKFLEKKKEKKHNKNNEN----NYQPDSQVKEQERLRKTVANLIKKKKHQAV 339
           A+EQEVRI+ FL+KK +K       N    N   +   KE E+ RK V  L++K K + V
Sbjct: 251 AVEQEVRINSFLQKKNKKNATDKTINTEAENVSEEIVAKETEKARKQVTVLMEKNKLRQV 310

Query: 340 GQIAKGTDDSRPWGREAKAKVGARLIELLIQTAYIQPPADQLADGPPDIRPAFWHSLKTV 399
             + +  D  +PWG+EA+ KVGARLI+LL++ AYIQPPA+Q  DGPPDIRPAF  + +TV
Sbjct: 311 KALVRKHDSFKPWGQEAQVKVGARLIQLLMENAYIQPPAEQFDDGPPDIRPAFKQNFRTV 370

Query: 400 VTDN--SVGRLGVIECDPLVIKGLDRTARQIVIPYMPMLMPPVKWRGYDKGGHILLPSFA 459
             +N  +  R G IECDPLV+KGLD++AR +VIPY+PML+PP  W GYD+G H  LPS+ 
Sbjct: 371 TLENTKTSRRYGCIECDPLVLKGLDKSARHMVIPYLPMLIPPQNWTGYDQGAHFFLPSYV 430

Query: 460 MRTHGAKQQRDAFKRTPKEQLTPVFQALDTLGNTKWRINKRILGVVERIWSSGGDLAGLV 519
           MRTHGAKQQR   KRTPKEQL PV++ALDTLGNTKW+INK++L +V+RIW++GG + GLV
Sbjct: 431 MRTHGAKQQRTVMKRTPKEQLEPVYEALDTLGNTKWKINKKVLSLVDRIWANGGRIGGLV 490

Query: 520 NRDDVPLPEKPDTEDETLIKKWKWEIRSVKKENMERHSQRCDIELKLAVARNMKDEEGFY 579
           +R+DVP+PE+P+ ED+   K W+WE +   K+N ERHSQRCDIELKL VAR MKDEEGFY
Sbjct: 491 DREDVPIPEEPEREDQEKFKNWRWESKKAIKQNNERHSQRCDIELKLEVARKMKDEEGFY 550

Query: 580 YPHNVDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLRKSGLSWLKIHLANLFAGGVDK 639
           YPHNVDFRGRAYP+HP+LNHLGSDLCRGILEF EG+PL KSGL WLKIH+ANL+AGGVDK
Sbjct: 551 YPHNVDFRGRAYPIHPYLNHLGSDLCRGILEFCEGKPLGKSGLRWLKIHIANLYAGGVDK 610

Query: 640 LSHDGRMTFVENHLEDIFDSADKPLGGRRWWLNAEDPFQFLAGCMNLTEALRSSSPETYI 699
           L+++ R+ F E+HLEDIFDS+D+PL G+RWWLNAEDPFQ LA C+NL+EALRS  PE  I
Sbjct: 611 LAYEDRIAFTESHLEDIFDSSDRPLEGKRWWLNAEDPFQCLAACINLSEALRSPFPEAAI 670

Query: 700 SHIPIHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIAARVQEILRRDAQKD 759
           SHIPIHQDGSCNGLQHYAALGRDKLGA +VNLV GEKPADVY+ IAARV +I+++DA++D
Sbjct: 671 SHIPIHQDGSCNGLQHYAALGRDKLGADAVNLVTGEKPADVYTEIAARVLKIMQQDAEED 730

Query: 760 PETFPDAMYAKKLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSELFG 819
           PETFP+A YAK ++DQVDRKLVKQTVMTSVYGVTY GARDQIK+RLKER    DDS  F 
Sbjct: 731 PETFPNATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKERGTFEDDSLTFH 790

Query: 820 CSCYAAKMTLEALGEMFVAAREIMNWLSDCAKIIASKNESVRWTTPLGLPVVQPYRKLGA 879
            SCYAAK+TL+AL EMF AAR I +W  DCAKIIAS+N +V WTTPLGLPVVQPYRK G 
Sbjct: 791 ASCYAAKITLKALEEMFEAARAIKSWFGDCAKIIASENNAVCWTTPLGLPVVQPYRKPGR 850

Query: 880 LSIKTSLQVLTLRRETDKILTSRQRTAFPPNFVHSLDSSHMMMTAIACNRAGLTFAGVHD 939
             +KT+LQVLTL RETDK++  RQ TAF PNF+HSLD SHMMMTA+ACNRAGL+FAGVHD
Sbjct: 851 HLVKTTLQVLTLSRETDKVMARRQMTAFAPNFIHSLDGSHMMMTAVACNRAGLSFAGVHD 910

Query: 940 SYWTHACDVDEMNRILRQKFVELYETP---KLLESFQQSFPALDFPPLPERGEFDLKE 976
           S+WTHACDVD MN ILR+KFVELYE P    LLESFQ+SFP + FPPLPERG+FDL++
Sbjct: 911 SFWTHACDVDVMNTILREKFVELYEKPILENLLESFQKSFPDISFPPLPERGDFDLRK 967

[Close]

BLAST of Pay0017264 vs. TAIR 10
Match: AT1G68990.2 (male gametophyte defective 3 )

HSP 1 Score: 1183.3 bits (3060), Expect = 0.0e+00
Identity = 581/905 (64.20%), Postives = 710/905 (78.45%), Query Frame = 0


Query: 100 KGYSSVAEAVSSTDVDEDASLDGEVQELLQEMSKEETRL------------KTVKGMPHS 159
           +GY++ A+A+ STD ++++S   EV EL+ EM KE  R+            + + GM   
Sbjct: 71  EGYATAAQAIDSTDPEDESSGSDEVNELITEMEKETERIRKKARLAAIPPKRVIAGMGAQ 130

Query: 160 KYLMLRRRQVTVEAEAWEKAVKEYKELLEDMCKQKLAPNLPYVKSLFLGWFEPFQEAINK 219
           K+ ML++RQV +E E WE+A +E +E+L DMC+QKLAPNLPY+KSLFLGWFEP + AI  
Sbjct: 131 KFYMLKQRQVKMETEEWERAARECREILADMCEQKLAPNLPYMKSLFLGWFEPVRNAIQD 190

Query: 220 EQELIQKGKKPRAPYAPYFVQLPADKMSVITMHKLMGMLMKGCEH-GNIKVVVAACAIGD 279
           + +   K KK + PYAP+  QLPADKM+VITMHK+MG+LM   E  G +K+V AA  IG+
Sbjct: 191 DLDTF-KIKKGKIPYAPFMEQLPADKMAVITMHKMMGLLMTNAEGVGIVKLVNAATQIGE 250

Query: 280 AIEQEVRIHKFLEKKKEKKHNKNNEN----NYQPDSQVKEQERLRKTVANLIKKKKHQAV 339
           A+EQEVRI+ FL+KK +K       N    N   +   KE E+ RK V  L++K K + V
Sbjct: 251 AVEQEVRINSFLQKKNKKNATDKTINTEAENVSEEIVAKETEKARKQVTVLMEKNKLRQV 310

Query: 340 GQIAKGTDDSRPWGREAKAKVGARLIELLIQTAYIQPPADQLADGPPDIRPAFWHSLKTV 399
             + +  D  +PWG+EA+ KVGARLI+LL++ AYIQPPA+Q  DGPPDIRPAF  + +TV
Sbjct: 311 KALVRKHDSFKPWGQEAQVKVGARLIQLLMENAYIQPPAEQFDDGPPDIRPAFKQNFRTV 370

Query: 400 VTDN--SVGRLGVIECDPLVIKGLDRT-------ARQIVIPYMPMLMPPVKWRGYDKGGH 459
             +N  +  R G IECDPLV+KGLD++       AR +VIPY+PML+PP  W GYD+G H
Sbjct: 371 TLENTKTSRRYGCIECDPLVLKGLDKSVSRIVDYARHMVIPYLPMLIPPQNWTGYDQGAH 430

Query: 460 ILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALDTLGNTKWRINKRILGVVERIWSSG 519
             LPS+ MRTHGAKQQR   KRTPKEQL PV++ALDTLGNTKW+INK++L +V+RIW++G
Sbjct: 431 FFLPSYVMRTHGAKQQRTVMKRTPKEQLEPVYEALDTLGNTKWKINKKVLSLVDRIWANG 490

Query: 520 GDLAGLVNRDDVPLPEKPDTEDETLIKKWKWEIRSVKKENMERHSQRCDIELKLAVARNM 579
           G + GLV+R+DVP+PE+P+ ED+   K W+WE +   K+N ERHSQRCDIELKL VAR M
Sbjct: 491 GRIGGLVDREDVPIPEEPEREDQEKFKNWRWESKKAIKQNNERHSQRCDIELKLEVARKM 550

Query: 580 KDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLRKSGLSWLKIHLANL 639
           KDEEGFYYPHNVDFRGRAYP+HP+LNHLGSDLCRGILEF EG+PL KSGL WLKIH+ANL
Sbjct: 551 KDEEGFYYPHNVDFRGRAYPIHPYLNHLGSDLCRGILEFCEGKPLGKSGLRWLKIHIANL 610

Query: 640 FAGGVDKLSHDGRMTFVENHLEDIFDSADKPLGGRRWWLNAEDPFQFLAGCMNLTEALRS 699
           +AGGVDKL+++ R+ F E+HLEDIFDS+D+PL G+RWWLNAEDPFQ LA C+NL+EALRS
Sbjct: 611 YAGGVDKLAYEDRIAFTESHLEDIFDSSDRPLEGKRWWLNAEDPFQCLAACINLSEALRS 670

Query: 700 SSPETYISHIPIHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIAARVQEIL 759
             PE  ISHIPIHQDGSCNGLQHYAALGRDKLGA +VNLV GEKPADVY+ IAARV +I+
Sbjct: 671 PFPEAAISHIPIHQDGSCNGLQHYAALGRDKLGADAVNLVTGEKPADVYTEIAARVLKIM 730

Query: 760 RRDAQKDPETFPDAMYAKKLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAIS 819
           ++DA++DPETFP+A YAK ++DQVDRKLVKQTVMTSVYGVTY GARDQIK+RLKER    
Sbjct: 731 QQDAEEDPETFPNATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKERGTFE 790

Query: 820 DDSELFGCSCYAAKMTLEALGEMFVAAREIMNWLSDCAKIIASKNESVRWTTPLGLPVVQ 879
           DDS  F  SCYAAK+TL+AL EMF AAR I +W  DCAKIIAS+N +V WTTPLGLPVVQ
Sbjct: 791 DDSLTFHASCYAAKITLKALEEMFEAARAIKSWFGDCAKIIASENNAVCWTTPLGLPVVQ 850

Query: 880 PYRKLGALSIKTSLQVLTLRRETDKILTSRQRTAFPPNFVHSLDSSHMMMTAIACNRAGL 939
           PYRK G   +KT+LQVLTL RETDK++  RQ TAF PNF+HSLD SHMMMTA+ACNRAGL
Sbjct: 851 PYRKPGRHLVKTTLQVLTLSRETDKVMARRQMTAFAPNFIHSLDGSHMMMTAVACNRAGL 910

Query: 940 TFAGVHDSYWTHACDVDEMNRILRQKFVELYETP---KLLESFQQSFPALDFPPLPERGE 976
           +FAGVHDS+WTHACDVD MN ILR+KFVELYE P    LLESFQ+SFP + FPPLPERG+
Sbjct: 911 SFAGVHDSFWTHACDVDVMNTILREKFVELYEKPILENLLESFQKSFPDISFPPLPERGD 970

[Close]

BLAST of Pay0017264 vs. TAIR 10
Match: AT2G24120.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 1100.1 bits (2844), Expect = 0.0e+00
Identity = 538/848 (63.44%), Postives = 664/848 (78.30%), Query Frame = 0


Query: 142 KGMPHSKYLMLRRRQVTVEAEAWEKAVKEYKELLEDMCKQKLAPNLPYVKSLFLGWFEPF 201
           K +   K+  LRRRQV  E EAWE+ V EY++L ++MC++ LAPNLPYVK +FLGWF+P 
Sbjct: 152 KDIDKRKFDSLRRRQVKEETEAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLGWFQPL 211

Query: 202 QEAINKEQELIQ-KGKKPRAPYAPYFVQLPADKMSVITMHKLMGMLMKGCEHGNIKVVVA 261
           ++ I +EQ+L + K KK RA YAP+   LPADKM+VI MHK+MG++M G E G I+VV A
Sbjct: 212 KDVIEREQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHEDGCIQVVQA 271

Query: 262 ACAIGDAIEQEVRIHKFLEKKKEKKHNKNNENNYQPDSQVKEQERLRKTVANLIKKKKHQ 321
           A +IG AIEQEVRIH FL     K+  KNN  + Q   ++KE++ LRK V +LI++K+  
Sbjct: 272 AVSIGIAIEQEVRIHNFL-----KRTRKNNAGDSQ--EELKEKQLLRKRVNSLIRRKRII 331

Query: 322 AVGQIAKGTDDSRPWGREAKAKVGARLIELLIQTAYIQPPADQLADGPPDIRPAFWHSLK 381
              ++ K ++ ++PWGR  +AK+G+RL+ELLI+ AY+QPP  Q  D  P+ RPAF H  K
Sbjct: 332 DALKVVK-SEGTKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEFRPAFRHRFK 391

Query: 382 TVVT---DNSVGRLGVIECDPLVIKGLDRTARQIVIPYMPMLMPPVKWRGYDKGGHILLP 441
           TV        V R GVIECD L++ GLD++A+ ++IPY+PML+PP +W+GYDKGG++ LP
Sbjct: 392 TVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWKGYDKGGYLFLP 451

Query: 442 SFAMRTHGAKQQRDAFKRTPKEQLTPVFQALDTLGNTKWRINKRILGVVERIWSSGGDLA 501
           S+ MRTHG+K+Q+DA K    +    VF+ALDTLGNTKWR+N+ IL VVER+W+ GG++A
Sbjct: 452 SYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRNILDVVERLWADGGNIA 511

Query: 502 GLVNRDDVPLPEKPDTEDETLIKKWKWEIRSVKKENMERHSQRCDIELKLAVARNMKDEE 561
           GLVNR+DVP+PEKP +ED   ++ WKW  R   K N ERHS RCD+ELKL+VAR MKDEE
Sbjct: 512 GLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCDVELKLSVARKMKDEE 571

Query: 562 GFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLRKSGLSWLKIHLANLFAGG 621
           GFYYPHN+DFRGRAYPMHPHLNHL SDLCRG LEFAEGRPL KSGL WLKIHLANL+AGG
Sbjct: 572 GFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYAGG 631

Query: 622 VDKLSHDGRMTFVENHLEDIFDSADKPLGGRRWWLNAEDPFQFLAGCMNLTEALRSSSPE 681
           V+KLSHD R+ FVENHL+DI DSA+ P+ G+RWWL AEDPFQ LA C+ LT+AL+S SP 
Sbjct: 632 VEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKSPSPY 691

Query: 682 TYISHIPIHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIAARVQEILRRDA 741
           + ISH+PIHQDGSCNGLQHYAALGRD   AA+VNLVAGEKPADVYS I+ RV EI+++D+
Sbjct: 692 SVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIMKKDS 751

Query: 742 QKDPETFPDAMYAKKLIDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERAAISDDSE 801
            KDPE+ P A  AK LI QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRL+E+  I+D+  
Sbjct: 752 SKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVITDERM 811

Query: 802 LFGCSCYAAKMTLEALGEMFVAAREIMNWLSDCAKIIASKNESVRWTTPLGLPVVQPYRK 861
           LF  +CY+AK+TL ALGE+F AAR IM+WL DCAKIIAS N  VRW TPLGLPVVQPY +
Sbjct: 812 LFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQPYCR 871

Query: 862 LGALSIKTSLQVLTLRRETDKILTSRQRTAFPPNFVHSLDSSHMMMTAIACNRAGLTFAG 921
                I+TSLQVL L+RE + +   +QRTAFPPNFVHSLD +HMMMTA+AC  AGL FAG
Sbjct: 872 SERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFAG 931

Query: 922 VHDSYWTHACDVDEMNRILRQKFVELYETP---KLLESFQQSFPALDFPPLPERGEFDLK 981
           VHDSYWTHACDVD MNRILR+KFVELY TP    LL+SFQ+S+P L FPP+P+RG+FDLK
Sbjct: 932 VHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKRGDFDLK 991

Query: 982 ETHRVESF 983
           E  + + F
Sbjct: 992 EVLKSQYF 991

The following BLAST results are available for this feature:

BLAST of Pay0017264 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VWF8	0.0e+00	67.61	DNA-directed RNA polymerase 2, chloroplastic/mitochondrial OS=Nicotiana sylvestr...	[more]
Q8L6J3	0.0e+00	67.71	DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial OS=Nicotiana tabacum...	[more]
Q8L6J5	0.0e+00	70.50	DNA-directed RNA polymerase 1B, mitochondrial OS=Nicotiana tabacum OX=4097 GN=RP...	[more]
Q93Y94	0.0e+00	70.05	DNA-directed RNA polymerase 1, mitochondrial OS=Nicotiana sylvestris OX=4096 GN=...	[more]
Q9LFV6	0.0e+00	63.25	DNA-directed RNA polymerase 2, chloroplastic/mitochondrial OS=Arabidopsis thalia...	[more]

BLAST of Pay0017264 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CBC4	0.0e+00	99.59	DNA-directed RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103498556 PE=3 SV=1	[more]
A0A5D3BPC9	0.0e+00	98.88	DNA-directed RNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5A7TDA0	0.0e+00	96.81	DNA-directed RNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A0A0KXM5	0.0e+00	89.90	DNA-directed RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_5G642180 PE=3 SV=1	[more]
A0A6J1JUF5	0.0e+00	79.47	DNA-directed RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111489816 PE=3 SV=...	[more]

BLAST of Pay0017264 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459412.1	0.0e+00	99.59	PREDICTED: DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial [Cucumis ...	[more]
TYK00602.1	0.0e+00	98.88	DNA-directed RNA polymerase 2B [Cucumis melo var. makuwa]	[more]
KAA0039415.1	0.0e+00	96.81	DNA-directed RNA polymerase 2B [Cucumis melo var. makuwa]	[more]
XP_004141596.2	0.0e+00	89.90	DNA-directed RNA polymerase 2, chloroplastic/mitochondrial [Cucumis sativus] >KG...	[more]
XP_038890080.1	0.0e+00	81.92	DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like isoform X1 [Beni...	[more]

BLAST of Pay0017264 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15700.2	0.0e+00	62.86	DNA/RNA polymerases superfamily protein	[more]
AT5G15700.1	0.0e+00	63.25	DNA/RNA polymerases superfamily protein	[more]
AT1G68990.1	0.0e+00	64.70	male gametophyte defective 3	[more]
AT1G68990.2	0.0e+00	64.20	male gametophyte defective 3	[more]
AT2G24120.1	0.0e+00	63.44	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 154..181
None	No IPR available	COILS	Coil	Coil	coord: 124..144
None	No IPR available	GENE3D	1.10.287.280		coord: 596..674 e-value: 1.3E-25 score: 90.9
None	No IPR available	GENE3D	1.10.150.20		coord: 705..894 e-value: 4.8E-64 score: 218.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..301
None	No IPR available	PANTHER	PTHR10102:SF7	DNA-DIRECTED RNA POLYMERASE	coord: 61..978
IPR029262	DNA-directed RNA polymerase, N-terminal	SMART	SM01311	RPOL_N_2	coord: 154..473 e-value: 7.9E-120 score: 414.1
IPR029262	DNA-directed RNA polymerase, N-terminal	PFAM	PF14700	RPOL_N	coord: 155..473 e-value: 2.9E-81 score: 273.5
IPR024075	DNA-directed RNA polymerase, helix hairpin domain superfamily	GENE3D	1.10.287.260		coord: 474..556 e-value: 5.5E-12 score: 47.9
IPR002092	DNA-directed RNA polymerase, phage-type	PFAM	PF00940	RNA_pol	coord: 596..957 e-value: 1.5E-150 score: 501.8
IPR002092	DNA-directed RNA polymerase, phage-type	PANTHER	PTHR10102	DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL	coord: 61..978
IPR002092	DNA-directed RNA polymerase, phage-type	PROSITE	PS00900	RNA_POL_PHAGE_1	coord: 684..695
IPR002092	DNA-directed RNA polymerase, phage-type	PROSITE	PS00489	RNA_POL_PHAGE_2	coord: 757..771
IPR037159	DNA-directed RNA polymerase, N-terminal domain superfamily	GENE3D	1.10.1320.10		coord: 130..473 e-value: 1.0E-75 score: 256.9
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 136..975

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0017264.1	Pay0017264.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006390	mitochondrial transcription
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0034245	mitochondrial DNA-directed RNA polymerase complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity