Pay0017214 (gene) Melon (Payzawat) v1

Overview
NamePay0017214
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionCyclin-dependent kinase F-4-like
Locationchr06: 35298909 .. 35300332 (-)
RNA-Seq ExpressionPay0017214
SyntenyPay0017214
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATAAGTTAATATAAAGGGGGACCAATCGCTAGCTGGCAAGTGGCACTAACCAACAAATCAAAGAGGTCTAAATCCGGGTGCAGGTTAAGAACCGGTGGGCCTGGACGTAGACAATGGAAACCTTGGTTGTATAAATAGCCATCGGTGTGGGTCATGATGGGAAATTAGGTATCTTTACCTTGGTTGGCACGCAGCAAAGATCTCGTGTTTTTTTGGGAATCCGTCTAGTTTTCTTTGTGGCTTTGAGAAGATTTGAGGGAAGAAGAGGAAGAAGAGGAAGAAGAAGAAGAAGAAGAGGTTGTGGGAAGCTCTGGATCCCTATTCTTCCCGTTCTTGGCGACGGAGGTTATGCTTCTTCATTTATCGGTATCGATTTTTTCCGATTTCTTTTTATGGTATTGTGAAAACTGTGTCTGGGTCATCTTGATGTGGTCTGATTGACGGATTAATTGATTGAATTGAGTGTTAGGGTTATTGGGTTTATTTATCTTTTGATTTATGTTTGTATATGTTTTTGTGGTTAATTAATGATTCGATACCGGATGACGGAGATATTGTTGCGGTTTTGTTTGGCCATTGATTGAAGAAATTATCGTTGGGTGGAAGTTTGTAGCGAGGGTGATGTTCGTTTATTTGCCTGTTTGTGAATTTGAAGATTTGTTGACTAGTCGGTTGGTGAATTGGTGAATTGGTGAATTAGGGTTTGTTCAGATTCGATGTCGGATATATTGTGAGATTTTGTTTGCTCACTGATTGTAAGGAATCTCGTTGGTTTGGAGTTTTGGGGCATTGCTGTTTGCTTCGCTTGCTTATTTGTGAATAGGAATTTTTGTCGACTAGTTGGTTGGTGGATTAGGGTTTTAATTGGATGAGCTCGGGATGTCTATCATCTTATTGGTTATTGATTGGGGTTTTCATTAATATGGAATTAATCCTTGTTTGAATTGGCATTTGCATTATGTTTCTTCTCTAATTAGTTTTGTCTCTTGCTTTTATTGTGTCAATAATTTGAATATTATGATCAGATTTGGGTATCTGGTACTTGGTGAATGATCTTTAGTATCTGATAAATTGAAGGCTTGTGTGAATTATGTCATTTATGACATCGACTTTTCTAAATTATACTGACCTTTATTTTTTATATCATCCATGAGTATGAGTCTAATGATTTGGTGGTATTTTGAACTATCAGGTCTTTGAGGGCTTGGATATAAAGGGATTTCTATATTTTCTCGAGATATGGAGCCTGCTTCTATTTGGACAAATTCCTTCCAGCATCAAGTTTGTTCTTTCCAGGAAGTGCTTGATTGGCGTTTCCTCGTTCTTGGAGATTTTCTTTTGGTTTCCTTTGTCAATTGCACTTAGTGGTCAAGTTCTCCTAAATGATCAGCACAGGAGGCGTAATGAAATTACTTTATAA

mRNA sequence

ATGAATAAGGAAGAAGAGGAAGAAGAGGAAGAAGAAGAAGAAGAAGAGGTTGTGGGAAGCTCTGGATCCCTATTCTTCCCGTTCTTGGCGACGGAGGTCTTTGAGGGCTTGGATATAAAGGGATTTCTATATTTTCTCGAGATATGGAGCCTGCTTCTATTTGGACAAATTCCTTCCAGCATCAAGTTTGTTCTTTCCAGGAAGTGCTTGATTGGCGTTTCCTCGTTCTTGGAGATTTTCTTTTGGTTTCCTTTGTCAATTGCACTTAGTGGTCAAGTTCTCCTAAATGATCAGCACAGGAGGCGTAATGAAATTACTTTATAA

Coding sequence (CDS)

ATGAATAAGGAAGAAGAGGAAGAAGAGGAAGAAGAAGAAGAAGAAGAGGTTGTGGGAAGCTCTGGATCCCTATTCTTCCCGTTCTTGGCGACGGAGGTCTTTGAGGGCTTGGATATAAAGGGATTTCTATATTTTCTCGAGATATGGAGCCTGCTTCTATTTGGACAAATTCCTTCCAGCATCAAGTTTGTTCTTTCCAGGAAGTGCTTGATTGGCGTTTCCTCGTTCTTGGAGATTTTCTTTTGGTTTCCTTTGTCAATTGCACTTAGTGGTCAAGTTCTCCTAAATGATCAGCACAGGAGGCGTAATGAAATTACTTTATAA

Protein sequence

MNKEEEEEEEEEEEEEVVGSSGSLFFPFLATEVFEGLDIKGFLYFLEIWSLLLFGQIPSSIKFVLSRKCLIGVSSFLEIFFWFPLSIALSGQVLLNDQHRRRNEITL
Homology
BLAST of Pay0017214 vs. ExPASy TrEMBL
Match: A0A0A0L3S6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G005575 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 5.8e-18
Identity = 50/54 (92.59%), Postives = 51/54 (94.44%), Query Frame = 0

Query: 29 LATEVFEGLDIKGFLYFLEIWSLLLFGQIPSSIKFVLSRKCLIGVSSFLEIFFW 83
          L   VFEGLDIKGFLYFLEIWSLLLFGQIPSSI+FVLSRKCLIGVSSFLEIFFW
Sbjct: 3  LHLSVFEGLDIKGFLYFLEIWSLLLFGQIPSSIEFVLSRKCLIGVSSFLEIFFW 56

BLAST of Pay0017214 vs. ExPASy TrEMBL
Match: A0A5E4EQ40 (PREDICTED: Cyclin-dependent OS=Prunus dulcis OX=3755 GN=ALMOND_2B006871 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.9e-14
Identity = 51/93 (54.84%), Postives = 59/93 (63.44%), Query Frame = 0

Query: 18  VGSSGSLFFPFLAT-------EVFEGLDIKGFLYFLEIWSLLLFGQIPSSIKFVLSRKCL 77
           +G+SG   FP LAT       +V  GLD+K F  FL+ WS    GQI +S    LSRKCL
Sbjct: 9   IGNSGFHLFPSLATVVMPLGFQVVPGLDLKSFDIFLKTWSRCASGQIATSTGSFLSRKCL 68

Query: 78  IGVSSFLEIFFWFPLSIALSGQVLLNDQHRRRN 104
            G    LEIFFWFPL IALSGQ LLNDQ+ RR+
Sbjct: 69  TGDFLSLEIFFWFPLLIALSGQFLLNDQYGRRD 101

BLAST of Pay0017214 vs. ExPASy TrEMBL
Match: A0A251P2F2 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G021200 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 4.7e-12
Identity = 44/75 (58.67%), Postives = 51/75 (68.00%), Query Frame = 0

Query: 29  LATEVFEGLDIKGFLYFLEIWSLLLFGQIPSSIKFVLSRKCLIGVSSFLEIFFWFPLSIA 88
           L  +V  GLD+K F  FL+ WS    GQI +S    LSRKCL G    LEIFFWFPL IA
Sbjct: 3   LGFQVVPGLDLKSFDIFLKTWSRCASGQIVTSTGSFLSRKCLTGDFLSLEIFFWFPLLIA 62

Query: 89  LSGQVLLNDQHRRRN 104
           LSGQ+LLNDQ+ RR+
Sbjct: 63  LSGQLLLNDQYGRRD 77

BLAST of Pay0017214 vs. ExPASy TrEMBL
Match: A0A6J5UR28 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS31007 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.4e-11
Identity = 43/75 (57.33%), Postives = 50/75 (66.67%), Query Frame = 0

Query: 29  LATEVFEGLDIKGFLYFLEIWSLLLFGQIPSSIKFVLSRKCLIGVSSFLEIFFWFPLSIA 88
           L  +V  GLD+K F  FL+ WS    GQI +S    LSRKCL G    LEIFFWFPL IA
Sbjct: 3   LGFQVVPGLDLKSFDIFLKTWSRCASGQIATSTGSFLSRKCLTGDFLSLEIFFWFPLLIA 62

Query: 89  LSGQVLLNDQHRRRN 104
           LSGQ L+NDQ+ RR+
Sbjct: 63  LSGQFLVNDQYGRRD 77

BLAST of Pay0017214 vs. ExPASy TrEMBL
Match: A0A2P2MHM0 (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.9e-09
Identity = 38/75 (50.67%), Postives = 47/75 (62.67%), Query Frame = 0

Query: 29  LATEVFEGLDIKGFLYFLEIWSLLLFGQIPSSIKFVLSRKCLIGVSSFLEIFFWFPLSIA 88
           L  +V   LD+ GF+ F EIW     GQ  +S+ F   +KC  G  S LEIFFWFPLSIA
Sbjct: 3   LGFQVVLDLDLNGFISFREIWRECSSGQTATSLWFFHCKKCSTGGFSSLEIFFWFPLSIA 62

Query: 89  LSGQVLLNDQHRRRN 104
           LSG  L ++ HRRR+
Sbjct: 63  LSGLFLFDEHHRRRD 77

BLAST of Pay0017214 vs. NCBI nr
Match: KAG6577751.1 (hypothetical protein SDJN03_25325, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 91.3 bits (225), Expect = 5.5e-15
Identity = 51/70 (72.86%), Postives = 56/70 (80.00%), Query Frame = 0

Query: 19 GSSGSLFFPFLATEVFEGLDIKGFLYFLEIWSLLLFGQIPSSIKFVLSR------KCL-- 78
          GSSGS FFPFL TEVFEGLDIKGFLYFL+IWSLLLFGQIPSSI+F LSR      K L  
Sbjct: 13 GSSGSQFFPFLPTEVFEGLDIKGFLYFLKIWSLLLFGQIPSSIEFALSRNTRGVMKLLYE 72

Query: 79 IGVSSFLEIF 81
          IGV S +++F
Sbjct: 73 IGVGSLVQLF 82

BLAST of Pay0017214 vs. NCBI nr
Match: KAG6596696.1 (hypothetical protein SDJN03_09876, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 89.7 bits (221), Expect = 1.6e-14
Identity = 44/50 (88.00%), Postives = 47/50 (94.00%), Query Frame = 0

Query: 32 EVFEGLDIKGFLYFLEIWSLLLFGQIPSSIKFVLSRKCLIGVSSFLEIFF 82
          ++FEGLDIKGFLYFL+IWSLLLFGQIPS IKFVLSRKCL GVS FLEIFF
Sbjct: 8  QIFEGLDIKGFLYFLKIWSLLLFGQIPSGIKFVLSRKCLTGVSLFLEIFF 57

BLAST of Pay0017214 vs. NCBI nr
Match: VVA17210.1 (PREDICTED: Cyclin-dependent [Prunus dulcis])

HSP 1 Score: 87.4 bits (215), Expect = 8.0e-14
Identity = 51/93 (54.84%), Postives = 59/93 (63.44%), Query Frame = 0

Query: 18  VGSSGSLFFPFLAT-------EVFEGLDIKGFLYFLEIWSLLLFGQIPSSIKFVLSRKCL 77
           +G+SG   FP LAT       +V  GLD+K F  FL+ WS    GQI +S    LSRKCL
Sbjct: 9   IGNSGFHLFPSLATVVMPLGFQVVPGLDLKSFDIFLKTWSRCASGQIATSTGSFLSRKCL 68

Query: 78  IGVSSFLEIFFWFPLSIALSGQVLLNDQHRRRN 104
            G    LEIFFWFPL IALSGQ LLNDQ+ RR+
Sbjct: 69  TGDFLSLEIFFWFPLLIALSGQFLLNDQYGRRD 101

BLAST of Pay0017214 vs. NCBI nr
Match: ONI05722.1 (hypothetical protein PRUPE_5G021200 [Prunus persica])

HSP 1 Score: 80.5 bits (197), Expect = 9.8e-12
Identity = 44/75 (58.67%), Postives = 51/75 (68.00%), Query Frame = 0

Query: 29  LATEVFEGLDIKGFLYFLEIWSLLLFGQIPSSIKFVLSRKCLIGVSSFLEIFFWFPLSIA 88
           L  +V  GLD+K F  FL+ WS    GQI +S    LSRKCL G    LEIFFWFPL IA
Sbjct: 3   LGFQVVPGLDLKSFDIFLKTWSRCASGQIVTSTGSFLSRKCLTGDFLSLEIFFWFPLLIA 62

Query: 89  LSGQVLLNDQHRRRN 104
           LSGQ+LLNDQ+ RR+
Sbjct: 63  LSGQLLLNDQYGRRD 77

BLAST of Pay0017214 vs. NCBI nr
Match: CAB4279010.1 (unnamed protein product [Prunus armeniaca] >CAB4309470.1 unnamed protein product [Prunus armeniaca])

HSP 1 Score: 79.0 bits (193), Expect = 2.8e-11
Identity = 43/75 (57.33%), Postives = 50/75 (66.67%), Query Frame = 0

Query: 29  LATEVFEGLDIKGFLYFLEIWSLLLFGQIPSSIKFVLSRKCLIGVSSFLEIFFWFPLSIA 88
           L  +V  GLD+K F  FL+ WS    GQI +S    LSRKCL G    LEIFFWFPL IA
Sbjct: 3   LGFQVVPGLDLKSFDIFLKTWSRCASGQIATSTGSFLSRKCLTGDFLSLEIFFWFPLLIA 62

Query: 89  LSGQVLLNDQHRRRN 104
           LSGQ L+NDQ+ RR+
Sbjct: 63  LSGQFLVNDQYGRRD 77

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L3S65.8e-1892.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G005575 PE=4 SV=1[more]
A0A5E4EQ403.9e-1454.84PREDICTED: Cyclin-dependent OS=Prunus dulcis OX=3755 GN=ALMOND_2B006871 PE=4 SV=... [more]
A0A251P2F24.7e-1258.67Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G021200 PE=4 SV=1[more]
A0A6J5UR281.4e-1157.33Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS31007 PE=4 S... [more]
A0A2P2MHM02.9e-0950.67Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAG6577751.15.5e-1572.86hypothetical protein SDJN03_25325, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6596696.11.6e-1488.00hypothetical protein SDJN03_09876, partial [Cucurbita argyrosperma subsp. sorori... [more]
VVA17210.18.0e-1454.84PREDICTED: Cyclin-dependent [Prunus dulcis][more]
ONI05722.19.8e-1258.67hypothetical protein PRUPE_5G021200 [Prunus persica][more]
CAB4279010.12.8e-1157.33unnamed protein product [Prunus armeniaca] >CAB4309470.1 unnamed protein product... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0017214.1Pay0017214.1mRNA