Pay0017033 (gene) Melon (Payzawat) v1

Overview


Name	Pay0017033
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Protein ELF4-LIKE 3-like
Location	chr05: 3693961 .. 3696496 (-)
RNA-Seq Expression	Pay0017033
Synteny	Pay0017033

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTCTTCTCTCTCTCTCTGCATCTCGTTCTCTTCTCTCTCTCTATCCTGTTTATTATTGTTTATTATTATTATTTAGTTTAATTAGTTTATTTATTTGTCCATCTCTTTCTCTTACTCTCTATCTAGATTTCTCAGAAGAGGTGTCTGTTCCGGAGATTCGATTTAATCGGCGATCTTTTTCCACTGCTCCTCGTGAATCAGACTCCTCTTCCTCCTTCTCTCCCTACAATATAATGTTCCAGATTTTCAAGGTACATCTTTTCTTTTTTAACGCATAATTTTCTTTTATTTTCACACCTTTCAAATTTTGCAATTATTACATAATAATCAAACTAAACAAACACCATTTTTTTTCTTCCCCTTTCCTTAGAAAATTAAAAAAAAAAAAAAAAACAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAGAAAAAGAAAACAATTGATTAATTTTGGTGTCCCCAGGTAGCGCCTGCAGTCATTAAATTATCTTCCCCTTTTAGTCCCTTAATATTCTGAAAAGAATTTGAGATTGTTCTTTGATTATTTCTTCTGCTTTGTCTGAATTTGAATTAATACAGTACCCATTCATATTTTGCTTAAATTAAATGGGGGATTCTCCCTCTTTTTATTCTTTTTAAATAAACATAGTAGTTTGTTTATATGTTTACGAATTTCAAATATTTTTAATTAGAAATATAGAATATTAGATGATAATGGTGTGGGTGTTGTTGCCTTGGCTTCTCTGCATCATTGACTGGGTTCTTTAGTACTGTTTGAAGAGATTCTGAGCTCTAGAAGGGTATTCTCTCAGTACATTAAGAAAAAAAAAAGTTCCTTTTTATGGAAATGAGAATGGGATCTGCTTTTTCTCTCTACTTCTCATTATCGAGTAATAATAAAAAAAAAAAAATTGTTTGTTTACATTAATAATAATTTCTCTCCTCTCATCATCCATGGAAATGGAGGTGATGATTTCTGCTACAGTTCTTGTCTCATGTGCAGAAACCCGTTTTCTTTTTTTTAGTTTTTTCCCCCTCTGTTTGGGGGTCATGTTAGTGAAAGATTGTACAGATAAAGAAGATATGATTATGGTCGTTCATTATTATTATTTTTTTTTTAAAAAAAAAAGAAACATGCATGTGTTGAATTAAATTATGCAAATTGTAACTAAAAAACTCATCTTTTTTTTATTTATTTAAAAAAGGATTATTATTGGGGAAGTGATTGAGTGAAGAAATAATATGGACGGGGAGACATTGTCAAGAGGAGAAATTGATGGGAAAATGGTACAGAGATTTCAAACGAATTTCGTTCAAGTACAGAACATTTTAGAGCAAAACAGAATGTTGATCAATGAAATAAACCAAAATCAGGAGTCGAGAATGGCGGGTAAAGTGAGCAGAAACGTGGGTCTGATTCGAGAGCTGAACAACAACATCAGAAGAGTTGTTGATTTATATGCTGATCTCTCCACTTCCTTCACCAACTCCATCGAACATGGAGACTCCGCGGCCAAGCCTGGCTACAAGCACAACCGCCCGTAGCAGCTATTACCCCCTTATCCTTTCTCATCTCATTCTTTCCCTTACTACAGCCAATAACTTAAATTATTCTAAAACCAAAATTTTCTTTTGTTGGGGGAAATATATTGTGAAGTAATTAGGCAGTGTGTGTGCCCGCTGTGCAGTGTAGGTACTACTCAACTCTATTCACTCTTCTCCTATGAACTCAAATTTAAACCTCCTTTTGTTCCTCTGCTTTTTTTTCCTCACAAAACTTACTGTTTCATCATTTTATTTTCACTGCTTAATTAATTTTGTCCATTTCTCTTTGTAGAAATTATTGTATCGTTATCTTATCTCTTTTAAAGAAAAAAAGAAGGTAAATTGTTTGTTGCAAAGACATTTCTCATCTTGGTGTTTGCGAAGATGCTGTGGGTTGAATGAATGATGGCACCTTTGGAGGGTCTTTTTGGCTCACAGCCACACACCCACCACAACATCAGAATCTCAGATAAGGGATAATGGTCTTTTTTGACCCTACCATTCCTCTTACTATTATTTTTATTTCTCAAATTTTTTACCAATGTGCCATCCCTTCCCTACCATTAATTATTACTTTGTTTCTAAAATCACCATACTATTTACAAATTCTTCCGCTTCCTCAATATAGCAGTAGTTATATTGTGACAGTTTTATCGACTAATGTTGTTAAAAAGACAGAAGCAGCAGGAGTACAGTTGTATATTAAGATAAGAGACAGAGAAGTAAAACAGTGACACCCAACAATATGACACAGGGACCCAAACCTTCACTCACTTTTGGCTTAGATTTGGAACAACTCAGCTTCTCCATGCTTATCCCTTCCCTCTTCTTAGCTTCTCTTTAACTTATTTAACATCATGTGATAAATAAGGTTCAAATCATAACAGTATAATTTCCTCTGTTATTCACGTCCACATGTTTAGTCTATAATAATTTG

mRNA sequence

TCTCTCTTCTCTCTCTCTCTGCATCTCGTTCTCTTCTCTCTCTCTATCCTGTTTATTATTGTTTATTATTATTATTTAGTTTAATTAGTTTATTTATTTGTCCATCTCTTTCTCTTACTCTCTATCTAGATTTCTCAGAAGAGGTGTCTGTTCCGGAGATTCGATTTAATCGGCGATCTTTTTCCACTGCTCCTCGTGAATCAGACTCCTCTTCCTCCTTCTCTCCCTACAATATAATGTTCCAGATTTTCAAGGATTATTATTGGGGAAGTGATTGAGTGAAGAAATAATATGGACGGGGAGACATTGTCAAGAGGAGAAATTGATGGGAAAATGGTACAGAGATTTCAAACGAATTTCGTTCAAGTACAGAACATTTTAGAGCAAAACAGAATGTTGATCAATGAAATAAACCAAAATCAGGAGTCGAGAATGGCGGGTAAAGTGAGCAGAAACGTGGGTCTGATTCGAGAGCTGAACAACAACATCAGAAGAGTTGTTGATTTATATGCTGATCTCTCCACTTCCTTCACCAACTCCATCGAACATGGAGACTCCGCGGCCAAGCCTGGCTACAAGCACAACCGCCCGTAGCAGCTATTACCCCCTTATCCTTTCTCATCTCATTCTTTCCCTTACTACAGCCAATAACTTAAATTATTCTAAAACCAAAATTTTCTTTTGTTGGGGGAAATATATTGTGAAGTAATTAGGCAGTGTGTGTGCCCGCTGTGCAGTGTAGGTACTACTCAACTCTATTCACTCTTCTCCTATGAACTCAAATTTAAACCTCCTTTTGTTCCTCTGCTTTTTTTTCCTCACAAAACTTACTGTTTCATCATTTTATTTTCACTGCTTAATTAATTTTGTCCATTTCTCTTTGTAGAAATTATTGTATCGTTATCTTATCTCTTTTAAAGAAAAAAAGAAGGTAAATTGTTTGTTGCAAAGACATTTCTCATCTTGGTGTTTGCGAAGATGCTGTGGGTTGAATGAATGATGGCACCTTTGGAGGGTCTTTTTGGCTCACAGCCACACACCCACCACAACATCAGAATCTCAGATAAGGGATAATGGTCTTTTTTGACCCTACCATTCCTCTTACTATTATTTTTATTTCTCAAATTTTTTACCAATGTGCCATCCCTTCCCTACCATTAATTATTACTTTGTTTCTAAAATCACCATACTATTTACAAATTCTTCCGCTTCCTCAATATAGCAGTAGTTATATTGTGACAGTTTTATCGACTAATGTTGTTAAAAAGACAGAAGCAGCAGGAGTACAGTTGTATATTAAGATAAGAGACAGAGAAGTAAAACAGTGACACCCAACAATATGACACAGGGACCCAAACCTTCACTCACTTTTGGCTTAGATTTGGAACAACTCAGCTTCTCCATGCTTATCCCTTCCCTCTTCTTAGCTTCTCTTTAACTTATTTAACATCATGTGATAAATAAGGTTCAAATCATAACAGTATAATTTCCTCTGTTATTCACGTCCACATGTTTAGTCTATAATAATTTG

Coding sequence (CDS)

ATGGACGGGGAGACATTGTCAAGAGGAGAAATTGATGGGAAAATGGTACAGAGATTTCAAACGAATTTCGTTCAAGTACAGAACATTTTAGAGCAAAACAGAATGTTGATCAATGAAATAAACCAAAATCAGGAGTCGAGAATGGCGGGTAAAGTGAGCAGAAACGTGGGTCTGATTCGAGAGCTGAACAACAACATCAGAAGAGTTGTTGATTTATATGCTGATCTCTCCACTTCCTTCACCAACTCCATCGAACATGGAGACTCCGCGGCCAAGCCTGGCTACAAGCACAACCGCCCGTAG

Protein sequence

MDGETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPGYKHNRP

Homology

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BLAST of Pay0017033 vs. ExPASy Swiss-Prot
Match: Q8S8F5 (Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.4e-23
Identity = 59/108 (54.63%), Postives = 79/108 (73.15%), Query Frame = 0


Query: 1   MDGETLSR-----GEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRN 60
           M+G+T+SR      ++DGK++Q F+ +FVQVQNIL+ NR+LINEINQN ES++   + RN
Sbjct: 1   MEGDTISRMMGSGVQMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRN 60

Query: 61  VGLIRELNNNIRRVVDLYADLSTSFTNSIE---HGDSAAKPGYKHNRP 101
           VGLIRELNNN+RRV  LY DLS +F+ S+E    GDS+   G +  RP
Sbjct: 61  VGLIRELNNNVRRVAHLYVDLSNNFSKSMEASSEGDSSEGRGNRRIRP 108

[Close]

BLAST of Pay0017033 vs. ExPASy Swiss-Prot
Match: Q94BS8 (Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.0e-21
Identity = 55/98 (56.12%), Postives = 69/98 (70.41%), Query Frame = 0


Query: 1   MDGETLS----RGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNV 60
           M+G+  S    R ++DGK++Q FQ +FVQVQ+IL+QNR+LINEINQN ES+ A  + RNV
Sbjct: 5   MEGDVYSGFGERYQMDGKLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHLGRNV 64

Query: 61  GLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPG 95
           GLIRELNNNIR V  LY DLS SF  S++        G
Sbjct: 65  GLIRELNNNIRTVASLYGDLSHSFARSVDASSEGESTG 102

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BLAST of Pay0017033 vs. ExPASy Swiss-Prot
Match: Q570U6 (Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.3e-21
Identity = 54/98 (55.10%), Postives = 68/98 (69.39%), Query Frame = 0


Query: 1  MDGETLS----RGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNV 60
          M+G+ LS    R  +DGK++Q FQ +FV VQ+IL+QNR+LINEINQN ES+    + RNV
Sbjct: 1  MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60

Query: 61 GLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPG 95
          GLI+ELNNNIRRV  LY DLS SF  S++        G
Sbjct: 61 GLIKELNNNIRRVASLYGDLSHSFARSVDASSEGESSG 98

[Close]

BLAST of Pay0017033 vs. ExPASy Swiss-Prot
Match: O04211 (Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 5.9e-14
Identity = 41/91 (45.05%), Postives = 61/91 (67.03%), Query Frame = 0


Query: 4   ETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELN 63
           E   +GE D  M +    NF QVQ++L++NR LI ++N N +SRMA  +S+NV LI+ELN
Sbjct: 15  EEAEQGE-DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELN 74

Query: 64  NNIRRVVDLYADLSTSFTNSIEHGDSAAKPG 95
            NI +VV++Y+DL+TSF++    G +    G
Sbjct: 75  GNISKVVNMYSDLNTSFSSGFHGGKNGHDGG 104

[Close]

BLAST of Pay0017033 vs. ExPASy Swiss-Prot
Match: O80877 (Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-09
Identity = 37/95 (38.95%), Postives = 53/95 (55.79%), Query Frame = 0


Query: 2   DGETL--SRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLI 61
           DGE +  S    D ++       F + Q  L+QNR LI  +N+N  SR+   VSRNVGLI
Sbjct: 22  DGEDVAASAAVEDVEVWDTLSNGFKRAQLYLDQNRDLIQRVNENHMSRIPDNVSRNVGLI 81

Query: 62  RELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPG 95
            E+N NI +V+++Y+DLS +F    +      K G
Sbjct: 82  NEINGNISQVMEIYSDLSLNFAKKFDQRRRTTKDG 116

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BLAST of Pay0017033 vs. ExPASy TrEMBL
Match: A0A5D3CFW0 (Protein ELF4-LIKE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001190 PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 4.7e-46
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MDGETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIR 60
           MDGETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIR
Sbjct: 1   MDGETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIR 60

Query: 61  ELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPGYKHNRP 101
           ELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPGYK NRP
Sbjct: 61  ELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPGYKRNRP 100

[Close]

BLAST of Pay0017033 vs. ExPASy TrEMBL
Match: A0A0A0LIL2 (Elf4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000210 PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 8.3e-43
Identity = 94/100 (94.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 1   MDGETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIR 60
           M+GETLSRGEIDGKMVQRFQ NFVQVQNILEQNRMLINEINQNQESRMAG VSRNVGLIR
Sbjct: 1   MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIR 60

Query: 61  ELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPGYKHNRP 101
           ELNNNIRRVVDLYADLSTSFT S EHGDSAAKPGYK NRP
Sbjct: 61  ELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP 100

[Close]

BLAST of Pay0017033 vs. ExPASy TrEMBL
Match: A0A6J1KJ14 (protein ELF4-LIKE 3-like OS=Cucurbita maxima OX=3661 GN=LOC111493668 PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 6.1e-30
Identity = 76/109 (69.72%), Postives = 87/109 (79.82%), Query Frame = 0


Query: 1   MDGETLSRG------EIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSR 60
           M+GETLS G      ++DGKM Q FQ NFVQVQNIL+QNR+LINEINQN ES+M   ++R
Sbjct: 1   MEGETLSSGGMGNGRQMDGKMAQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLAR 60

Query: 61  NVGLIRELNNNIRRVVDLYADLSTSFTNSIE---HGDSAAKPGYKHNRP 101
           NVGLIRELNNNIRRVVDLYA LS SFT S+E    G+SAAKPG+K NRP
Sbjct: 61  NVGLIRELNNNIRRVVDLYAHLSASFTKSMEASSEGNSAAKPGHKRNRP 109

[Close]

BLAST of Pay0017033 vs. ExPASy TrEMBL
Match: A0A6J1G4K6 (protein ELF4-LIKE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111450723 PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 6.1e-30
Identity = 76/109 (69.72%), Postives = 87/109 (79.82%), Query Frame = 0


Query: 1   MDGETLSRG------EIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSR 60
           M+GETLS G      ++DGKM Q FQ NFVQVQNIL+QNR+LINEINQN ES+M   ++R
Sbjct: 1   MEGETLSSGGMGNGRQMDGKMAQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLAR 60

Query: 61  NVGLIRELNNNIRRVVDLYADLSTSFTNSIE---HGDSAAKPGYKHNRP 101
           NVGLIRELNNNIRRVVDLYA LS SFT S+E    G+SAAKPG+K NRP
Sbjct: 61  NVGLIRELNNNIRRVVDLYAHLSASFTKSMEASSEGNSAAKPGHKRNRP 109

[Close]

BLAST of Pay0017033 vs. ExPASy TrEMBL
Match: A0A1U7WX74 (protein ELF4-LIKE 3-like OS=Nicotiana sylvestris OX=4096 GN=LOC104232936 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.4e-28
Identity = 70/104 (67.31%), Postives = 84/104 (80.77%), Query Frame = 0


Query: 1   MDGETLSR----GEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNV 60
           M+G+TLS      +IDGK+VQ FQ NFVQVQNIL+QNR+LINEINQNQES++   +SRNV
Sbjct: 1   MEGDTLSGLGNVTQIDGKVVQTFQKNFVQVQNILDQNRLLINEINQNQESKIPDNLSRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPGYKHNRP 101
           GLIRELNNNIRRVVDLYADLSTSFT S+++       G+K +RP
Sbjct: 61  GLIRELNNNIRRVVDLYADLSTSFTKSVDNSSEGDSSGHKRSRP 104

[Close]

BLAST of Pay0017033 vs. NCBI nr
Match: KAA0061471.1 (protein ELF4-LIKE 3-like [Cucumis melo var. makuwa] >TYK10803.1 protein ELF4-LIKE 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 193.4 bits (490), Expect = 9.7e-46
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MDGETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIR 60
           MDGETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIR
Sbjct: 1   MDGETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIR 60

Query: 61  ELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPGYKHNRP 101
           ELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPGYK NRP
Sbjct: 61  ELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPGYKRNRP 100

[Close]

BLAST of Pay0017033 vs. NCBI nr
Match: KGN60512.1 (hypothetical protein Csa_019281 [Cucumis sativus])

HSP 1 Score: 182.6 bits (462), Expect = 1.7e-42
Identity = 94/100 (94.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 1   MDGETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIR 60
           M+GETLSRGEIDGKMVQRFQ NFVQVQNILEQNRMLINEINQNQESRMAG VSRNVGLIR
Sbjct: 1   MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIR 60

Query: 61  ELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPGYKHNRP 101
           ELNNNIRRVVDLYADLSTSFT S EHGDSAAKPGYK NRP
Sbjct: 61  ELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP 100

[Close]

BLAST of Pay0017033 vs. NCBI nr
Match: XP_038890489.1 (protein ELF4-LIKE 3-like [Benincasa hispida])

HSP 1 Score: 150.6 bits (379), Expect = 7.2e-33
Identity = 79/107 (73.83%), Postives = 89/107 (83.18%), Query Frame = 0


Query: 1   MDGETLSRG-------EIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVS 60
           M+GETLS G       E+DGKMVQ FQ NFVQV+NIL+QNR+LINEINQN ES+M   ++
Sbjct: 1   MEGETLSSGGIGKGIREMDGKMVQTFQKNFVQVENILDQNRLLINEINQNHESKMPHNLT 60

Query: 61  RNVGLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPGYKHNRP 101
           RNVGLIRELNNNIRRVVDLYADLSTSFT SI+ GDSA KPG+K NRP
Sbjct: 61  RNVGLIRELNNNIRRVVDLYADLSTSFTKSIDDGDSAVKPGHKRNRP 107

[Close]

BLAST of Pay0017033 vs. NCBI nr
Match: XP_022946747.1 (protein ELF4-LIKE 3-like [Cucurbita moschata] >XP_022946748.1 protein ELF4-LIKE 3-like [Cucurbita moschata] >XP_022999232.1 protein ELF4-LIKE 3-like [Cucurbita maxima] >XP_022999233.1 protein ELF4-LIKE 3-like [Cucurbita maxima] >XP_022999234.1 protein ELF4-LIKE 3-like [Cucurbita maxima] >XP_022999235.1 protein ELF4-LIKE 3-like [Cucurbita maxima] >KAG7030507.1 Protein ELF4-LIKE 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 139.8 bits (351), Expect = 1.3e-29
Identity = 76/109 (69.72%), Postives = 87/109 (79.82%), Query Frame = 0


Query: 1   MDGETLSRG------EIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSR 60
           M+GETLS G      ++DGKM Q FQ NFVQVQNIL+QNR+LINEINQN ES+M   ++R
Sbjct: 1   MEGETLSSGGMGNGRQMDGKMAQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLAR 60

Query: 61  NVGLIRELNNNIRRVVDLYADLSTSFTNSIE---HGDSAAKPGYKHNRP 101
           NVGLIRELNNNIRRVVDLYA LS SFT S+E    G+SAAKPG+K NRP
Sbjct: 61  NVGLIRELNNNIRRVVDLYAHLSASFTKSMEASSEGNSAAKPGHKRNRP 109

[Close]

BLAST of Pay0017033 vs. NCBI nr
Match: XP_023521403.1 (protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023521404.1 protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023546933.1 protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023546934.1 protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 137.9 bits (346), Expect = 4.8e-29
Identity = 75/109 (68.81%), Postives = 86/109 (78.90%), Query Frame = 0


Query: 1   MDGETLSRG------EIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSR 60
           M+GETLS G      ++DGKM   FQ NFVQVQNIL+QNR+LINEINQN ES+M   ++R
Sbjct: 1   MEGETLSSGGMGNGRQMDGKMAHTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLAR 60

Query: 61  NVGLIRELNNNIRRVVDLYADLSTSFTNSIE---HGDSAAKPGYKHNRP 101
           NVGLIRELNNNIRRVVDLYA LS SFT S+E    G+SAAKPG+K NRP
Sbjct: 61  NVGLIRELNNNIRRVVDLYAHLSASFTKSMEASSEGNSAAKPGHKRNRP 109

[Close]

BLAST of Pay0017033 vs. TAIR 10
Match: AT2G06255.1 (ELF4-like 3 )

HSP 1 Score: 109.4 bits (272), Expect = 1.7e-24
Identity = 59/108 (54.63%), Postives = 79/108 (73.15%), Query Frame = 0


Query: 1   MDGETLSR-----GEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRN 60
           M+G+T+SR      ++DGK++Q F+ +FVQVQNIL+ NR+LINEINQN ES++   + RN
Sbjct: 1   MEGDTISRMMGSGVQMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRN 60

Query: 61  VGLIRELNNNIRRVVDLYADLSTSFTNSIE---HGDSAAKPGYKHNRP 101
           VGLIRELNNN+RRV  LY DLS +F+ S+E    GDS+   G +  RP
Sbjct: 61  VGLIRELNNNVRRVAHLYVDLSNNFSKSMEASSEGDSSEGRGNRRIRP 108

[Close]

BLAST of Pay0017033 vs. TAIR 10
Match: AT1G72630.1 (ELF4-like 2 )

HSP 1 Score: 104.0 bits (258), Expect = 7.2e-23
Identity = 55/98 (56.12%), Postives = 69/98 (70.41%), Query Frame = 0


Query: 1   MDGETLS----RGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNV 60
           M+G+  S    R ++DGK++Q FQ +FVQVQ+IL+QNR+LINEINQN ES+ A  + RNV
Sbjct: 5   MEGDVYSGFGERYQMDGKLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHLGRNV 64

Query: 61  GLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPG 95
           GLIRELNNNIR V  LY DLS SF  S++        G
Sbjct: 65  GLIRELNNNIRTVASLYGDLSHSFARSVDASSEGESTG 102

[Close]

BLAST of Pay0017033 vs. TAIR 10
Match: AT1G17455.1 (ELF4-like 4 )

HSP 1 Score: 102.8 bits (255), Expect = 1.6e-22
Identity = 54/98 (55.10%), Postives = 68/98 (69.39%), Query Frame = 0


Query: 1  MDGETLS----RGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNV 60
          M+G+ LS    R  +DGK++Q FQ +FV VQ+IL+QNR+LINEINQN ES+    + RNV
Sbjct: 1  MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60

Query: 61 GLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPG 95
          GLI+ELNNNIRRV  LY DLS SF  S++        G
Sbjct: 61 GLIKELNNNIRRVASLYGDLSHSFARSVDASSEGESSG 98

[Close]

BLAST of Pay0017033 vs. TAIR 10
Match: AT1G17455.2 (ELF4-like 4 )

HSP 1 Score: 102.8 bits (255), Expect = 1.6e-22
Identity = 54/98 (55.10%), Postives = 68/98 (69.39%), Query Frame = 0


Query: 1  MDGETLS----RGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNV 60
          M+G+ LS    R  +DGK++Q FQ +FV VQ+IL+QNR+LINEINQN ES+    + RNV
Sbjct: 1  MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60

Query: 61 GLIRELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPG 95
          GLI+ELNNNIRRV  LY DLS SF  S++        G
Sbjct: 61 GLIKELNNNIRRVASLYGDLSHSFARSVDASSEGESSG 98

[Close]

BLAST of Pay0017033 vs. TAIR 10
Match: AT2G40080.1 (Protein of unknown function (DUF1313) )

HSP 1 Score: 78.2 bits (191), Expect = 4.2e-15
Identity = 41/91 (45.05%), Postives = 61/91 (67.03%), Query Frame = 0


Query: 4   ETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIRELN 63
           E   +GE D  M +    NF QVQ++L++NR LI ++N N +SRMA  +S+NV LI+ELN
Sbjct: 15  EEAEQGE-DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELN 74

Query: 64  NNIRRVVDLYADLSTSFTNSIEHGDSAAKPG 95
            NI +VV++Y+DL+TSF++    G +    G
Sbjct: 75  GNISKVVNMYSDLNTSFSSGFHGGKNGHDGG 104

The following BLAST results are available for this feature:

BLAST of Pay0017033 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8F5	2.4e-23	54.63	Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1	[more]
Q94BS8	1.0e-21	56.12	Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1	[more]
Q570U6	2.3e-21	55.10	Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1	[more]
O04211	5.9e-14	45.05	Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1	[more]
O80877	1.5e-09	38.95	Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1	[more]

BLAST of Pay0017033 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CFW0	4.7e-46	99.00	Protein ELF4-LIKE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A0A0LIL2	8.3e-43	94.00	Elf4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000210 PE=3 S...	[more]
A0A6J1KJ14	6.1e-30	69.72	protein ELF4-LIKE 3-like OS=Cucurbita maxima OX=3661 GN=LOC111493668 PE=3 SV=1	[more]
A0A6J1G4K6	6.1e-30	69.72	protein ELF4-LIKE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111450723 PE=3 SV=1	[more]
A0A1U7WX74	4.4e-28	67.31	protein ELF4-LIKE 3-like OS=Nicotiana sylvestris OX=4096 GN=LOC104232936 PE=3 SV...	[more]

BLAST of Pay0017033 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061471.1	9.7e-46	99.00	protein ELF4-LIKE 3-like [Cucumis melo var. makuwa] >TYK10803.1 protein ELF4-LIK...	[more]
KGN60512.1	1.7e-42	94.00	hypothetical protein Csa_019281 [Cucumis sativus]	[more]
XP_038890489.1	7.2e-33	73.83	protein ELF4-LIKE 3-like [Benincasa hispida]	[more]
XP_022946747.1	1.3e-29	69.72	protein ELF4-LIKE 3-like [Cucurbita moschata] >XP_022946748.1 protein ELF4-LIKE ...	[more]
XP_023521403.1	4.8e-29	68.81	protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023521404.1...	[more]

BLAST of Pay0017033 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G06255.1	1.7e-24	54.63	ELF4-like 3	[more]
AT1G72630.1	7.2e-23	56.12	ELF4-like 2	[more]
AT1G17455.1	1.6e-22	55.10	ELF4-like 4	[more]
AT1G17455.2	1.6e-22	55.10	ELF4-like 4	[more]
AT2G40080.1	4.2e-15	45.05	Protein of unknown function (DUF1313)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009741	Protein EARLY FLOWERING 4 domain	PFAM	PF07011	Elf4	coord: 11..89 e-value: 3.6E-36 score: 122.9
IPR040462	Protein EARLY FLOWERING 4	PANTHER	PTHR33469	PROTEIN ELF4-LIKE 4	coord: 1..100
None	No IPR available	PANTHER	PTHR33469:SF17	PROTEIN ELF4-LIKE 3-LIKE	coord: 1..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0017033.1	Pay0017033.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009649	entrainment of circadian clock
biological_process	GO:0042753	positive regulation of circadian rhythm
cellular_component	GO:0005634	nucleus