Pay0016908 (gene) Melon (Payzawat) v1

Overview


Name	Pay0016908
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Reverse transcriptase
Location	chr01: 7618442 .. 7627966 (-)
RNA-Seq Expression	Pay0016908
Synteny	Pay0016908

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTGATGAACAGGGTGTTTAAGGAGTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTCATTTACTCAAAAACTGAGGCTGAGCACGAGGAGCACTTACACCAAGTTTTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCCGCAAAGATTGAAGCGGTGACCAACTGGACCCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAAGAAGGGAACCCCTTTTGTCTGGAGCCCAGCTTGCGAGAGGAGCTTTCAGGAGCTCAAACAGAAGCTAGTGACTGCACCGGTCCTGACAGTGCCCGATGGTTCGGGAAACTTTGTAATCTATAGTGACGCCTCCAAGAAGGGACTAGGTTGTGTCCTGATGCAGCAGGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATCCATGAGCAGAACTACCCTACCCATGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGATCATAAGAGCCTGAAGTACTTCTTCACCCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTTGAGTTGGTGAAAGACTACGACTGCGAGATCCTATACCACCCAGGTAAAGCGAATGTAGTGGCTGATGCGCTAAGTAGGAAAGTTGCACATTCAGCAGCGCTAATCACCAAGCAGACCCCCTTACTCAGGGACTTTGAGAGGGCAGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGGCTCAGTTGACAGTTCAGCCAACCTTGAGGCAAAAGATCATTGCTGCTCAGCTGAATGATCCTTATTTGGCAGAGAAGCGTCGCGTGGTAGAGACAGAGCAAGGTGAAGGCTTCTCCATATCCTCTGACGATGGCCTTATGTTTGAAGGACGCCTGTGTGTGCCGGAAGACAGCGCAGTTAAGACGGAGCTTTTGACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGATGTGGCAGACTTTGTCAGTAGATGCTTGGTGTGCCAGCAGGTGAAGGCACCTAGGCAGCATCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATGGATTTTATTACGGGACTGCCCAAGACCCTAAGGGGCTACACGGTGATCTGGGTCGTGGTCGACAGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGGCAGCTATATATGACAGAGATTGTGAGACTACATGGAGTACCCGTATCCATCATTTCAGACAGAGACGCCCGTTTCACATCGAAGTTCTGGAAAGGACTTCAATTGCATTAGGTACAAGGTTGGACTTCAGCACGGCATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTAGAAGACATGCTGCGAGCCTGCGTACTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCTGATGGAGTTTGCCTATAACAACAGCTACCAGGCTACTATCGGTATGGCACCGTTCGAGGCTCTGTATGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGCCCCGAATTAGTGCAGACGACCAACGCAGCCATACAGAAGATCCGAGCTCGTATGCTGACAGCCCAGAGCAGACAGAAGAGTTACGCTGATGTACGACGTAAGGACCTCGAGTTTGAAGTGGGAGATATGGTCTTTCTGAAGGTTGCACCCATGAAGGGTGTTCTGAGGTTCGCGAAGAAGGGGAAGCTGAGCCCACGCTTCGTAGGGCCGTTCGAGATATTGGAGCGGATTGGCCCCGTGGCTTACCGCTTGGCGCTACCCCCATCGTTTGCTGCAGTGCACGACGTATTCCATATCTCCATGCTGAGGAAATATGTCGCAGACCCAACACATGTGGTGGACTTCGAGCCACTGCAGGTTAGCGAGAATCTGAGCTACGAGGAGCAGCCTGTCGAGGTCCTGGCAAGGGAGGTCAAGAAGCTTCGCAGTCGAGAAATTCCACTGGTCAAAATCCTTTGGCAAAACCATGGAGTGGAAGAGGCAACGTGGGAGAAAGAAGAGGACATTAGAGCCCAGCACCCCGAGCTGTTCGAGGATTAGAACTTTCGAGGACGAAAGTTTTTTTTTAGGAGGGAAGATTGTAACGCCCAACATTTTTCGGTTTCCTTTGTTATTTTGGACCACTAATAATATTAATACTAAGTGTAGTTAATATTATCCTTATTAAACTAAAGTTGTTTCCTTTTTTATAAACTATTGAAGTTAGGGGTAAATTAGTAAATCAATGGAGTGGCAAATTAATTAATTGCCTTGGAAAGGGTCAAGGGTGGAGAGAGAGGAAAAGGGGGCTATTAAATTCTTTTTTATTTTGGGATTTCTTTTAAAAAGAGGCATTGGGAGACGTGAGACTCCTCATCTCCCCAAAGAAGAAAAGAAAAAAAAAGGGAAACCCTAGCCGCCGCCACCCTCCGCGCCGCCGCACGTCGCCGCCGCACGCCGCCGCCGCACGCCGCACGCCGCCAGCTTCGACAAGCGCCGAGCCGATCCACCGCGCGTCTGCAAGCCGAAGGGAAGCCGAGCCATCCTCCGCGCGTCTGCAGCCGAGTCCGCAGCCGCCAGCCGAGCCGGAACCCGCCGCGCCGCTTCGACCTAAGGGGGACCGCCGACGCCGCGCCGCTCCGATCAGGAGAGTAGCTGAGCCGCGCCGCGTCGCTTCGATCAAGCCGATCCGCCGAAGCTCGCAGCGCCGCGTCGATCCGAGGAGTTCCGTCAGCCGCGCCACCCGATCGAGCCGAAGGGAGCCGCTTCGCTCCGCGCCCAGCCGTCTCCCGCAGCCGCCGCTCAAAGCCGATCCGCCGCGCTTCACTCCAGCCGACGAACGAACCCGGAGCCGCTCCACCGTCCGCGCGCCCGAAGCCGAAACTGAAGCCGCGCCGCGTCCAGCCCTCCCCGCGTGTGAACCGCGTCCGCGTGGGAAGCCGCGCCGCGCGTTCCGCGTAGCCGAGCCGCATCTCCTCCCTGTTGCAAGCCGAGCCGCCCGCGTAGCTTCCTGTACCGAGCCGAGCCGCGTCTGCCCAAGCCGAGCCGGTCCTGTCTTCTTCCAGCCGAGCCGCCAGGACTAATTTGGCTCCATCCACCTAAATTTTGGTAATCTAATTAATTATTGTGGTTTTTCCGGTAAGACTCCATGCTCGGACGTTAGTTAAATTAATTTGGGTCTAAATTAAATTATTTTTCCTCAAGGGACGTCTTGGACCAAGAAATTGCTGCAGCGCGGGATTTCTTCAGTAGGGGCTCGAGCACTGCAACCTCTCTAGGGTAAGTTATTTCAATTGAGTCTTGAACCGTTAGTCGTTGGCGACCTATTTACGAATTTTGACTTATTAAACAGTTAGGACTTCGTCGCTTGGAAAGCGTACTGCCTCGCGGTTAGGACTCGACAAGTAGATCTCCAGGTAAGAGATTCTACTACTAGTTTCATGTTTGAAGTATGAGACTGTGTATGCCCTATGTTGCATATTGAGGATTTGACAGTATGATGCCTGAAATAAATGCTAGTATGATGCAAATGACGATATAGTTGTGCTATAGCCTGTTATGTGTGGCAAGATCTATTATGGTTACGACGAATGTCGGGACGGAGAGTGTAGAAATGATTTATGTGACATGTTATATGCTGATGCCATGTGTATGTTTACTGCAATTAGGGTACCTGTTAGCTTGATTTCTGTTAGAGTCGTACCTGCATGGGTGTCCTTCGGGATCACCACCTATTGAGGACTGTGTGGTCCGACGGGACGCCAGTCTAGCATGATATAGACATGACTCGAGTGACTCGACGGGGTCCTCGCATCCCGACTGTCCTAGGTGTCCCCGGGCACCGAAGACCAGAGTTACGTTCCTACGGGAGCGCATGATTGCACGTGTTCGGGAACGTGCCAGAGATTGGGTACCAGTTATCAGGACTCTAACAGGAAGTTAACAGGCACCTAGTGGGACTAGTAGTGGGTCCCTTACTGAGTATTTTTATACTCATTCTCTCCATTTTATGTTTTCAGGTAGAGGACGAGGCAAGGGCAAGGGCAAGCTGGCGAGCGACCCGAAGTGAGACCGAGGAGGGCCATAGGGACTACCGCTTCCGCTTATTTCTTATTTCAGATTTTAGCATTTGAGTTTGAGTACTTTTTATTTTTCACTATCTTTTATGTAGATAGGGCCCGAGTAGGATTTCAGAACGTTTTTACATTTTTGCATGACTACCTTGTTTATGTTTTTATAAATGAATTTCTTGAACCGTATGCTTTTAATAAAATTTTTAGACTTAAACCACTTGTTCTATATTTAGTAATGACTTCGATTCAGCATAAGGAGTTGGGTCGTTACAGTTGGTATCAGAGCACAGTGTTTTAGGTTCTGTAGACTGACCTACGATGTAAGTCATTTTTGTTTGGTTTTACTTCACCCTATGGCTATACGGTCCTTCGGCACTCGCCAGGTATGTCTAAAGCCTTGCTAATGTTAAGATTACAATTTTGCCTGAATAGTCTAAGACCTAGATATAGGGTGTTAAGTTCTTGTGGTGAAAAGTTTGTTGGTGAATTTTAGGGAGAATGCCGCCACGTAGAGGTACACGCCGAGGAGGTGGTAGGGGAGGCAGAGGAGCCGGTCGTGGCCAGCCGGAGGCGCCACCTGTTGCACCGGCAGTCGACCCAAACGCACCGGTCACCCAGGCGGATCTCGCCGCAATGGAGCAGCGTTATCAGGACATGCTGCAAGCTGCTTTGGCGCCTTTCCTTGCCGCCCAGCAGAACCAGGCCGCCCCTGTTCAGGCCGAGGCCGCCCCTGTTCAGGCCGAGGCCGCCCTGCTCAGGCCCAGGCCGCCCCTGTTCAGGCTCAGGCCGTCGCTCCTCCAGCCCCTGAGGAAGCTCAACCAGTACCAGTTCAACTGTCGGCCGAGGCGAAACACTTACGGGATTTCAGGAAGTATAATCCCAAGACCTTTGACGGATCCATGGACAACCCCACAAAGGCCCAAATGTGGTTGACGTCCATAGAGACTATTTTCCGGTACATGAAGTGCCCAGAAGACCAGAAGGTGCAGTGTGCAGTCTTCTTCTTGGAGGACAGGGGCACCGCCTGGTGGGAGACCGCGGAGAGAATGCTAGGGGGCGATGTAAGCAAAATAACATGGGAGCAGTTCAAGGAGAACTTCTATGCTAAGTTTTTCTCCGCCAATGTGAAGCACGCCAAGCTGCAAGAGTTCCTAAACTTGGAGCAAGGCGACATGACGGTGGAGCAGTACGACGCCGAGTTCGATATGCTGTCCCGCTTTGCTCCCGATATGGTAAGAGATGAGGCTGCCAGGACGGAGAAATTTGTTAGAGGACTCAGGCTAGACCTTCAGGGCATTGTCAGAGCCCTCCGCCCAGCCACGCATGCTGATGCACTACGTATAGCACTGGATTTGAGCCTGCCTGAGAGAGCCGATGCGTCTAAGGCTGCCGGCAGAGGGTCAGCCTTGGGACAGAAGAGAAAGGTTGAGACGCAGCCTGACGTAGCACCGCAGCGAACACTGAGGTCAGGAGGTGTCTTCCAGAGACACCGACGGGAGCTTGCAGCAGCCGGGAGGACTCTGAGAGAGCTACCCGCTTGTACTACCTGCGGGAGAGTCCACGGAGGTCGTTGCTTGGCTGGAAGTGGAGTCTGCTTTAGGTGCAGACAGCCGGGGCACACTGCTGATATGTGTCCTCGGAAACCCTTTGAGACGACACCGCCCCAGCCTTCTGCGGCCCAGCAGGGGAGAGTTTTCGCCACTACCCGGCAGGAGGCCGAGCGAGCTGGCACTGTGGTGACAGGTACGCTCCCAATTTTGGGGCACTATGCTTTTGTGCTATTTGACTCTGGGTCATCCCACTCGTTTATATCCTCCGTTTTCGTTCAGCATGTGGGTTTAGAGGTAGAGCCTTTGGGTAGTGTTTTGTCGGTTTCTACTCCATCTGGGGAGGTCCTGTTATCCAAAGAACAAATAAAGGCATGTCGGGTAGAGATAGCGAATCGTATGTTAGACGTGACCTTGCTAGTGTTAGACATGCAGGATTTTGATGTGATACTAGGCATGGATTGGCTATCAGCCAACCATGCAAATATAGACTGTTATGGCAAGGAAGTTGTCTTCAACCCTCCCTCCGAGGCTAGTTTCAAATTCAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGTATTTTGGCAAGCGTAGTGGATGTGAGAGAGCCGGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGAGAGTACCCCGACGTTTTTCCAGACGAACTTCCAGGACTTCCGCCTCCCAGAGAAGTAGACTTCGCTATCGAGTTAGAGCCGGGCACTGCCCCAATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAACTAAAGGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTGAAGAAGAAGGATGGGTCAATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTCAAAAACCGCTACCCCTTGCCCAGGATTGATGACCTGTTCGATCAGTTGCAGGGAGCCACCGTCTTCTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATCCCCAAGACGGCCTTTCGATCGAGGTACGGACATTACGAATTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTATTCATGGATCTGATGAACAGGGTGTTTAAGGAGTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTCATTTACTCAAAAACTGAGGCTGAGCACGAGGAGCACTTACACCAAGTTTTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCCGCAAAGATTGAAGCGGTGACCAACTGGACCCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAAGAAGGGAACCCCTTTTGTCTGGAGCCCAGCTTGCGAGAGGAGCTTTCAGGAGCTCAAACAGAAGCTAGTGACTGCACCGGTCCTGACAGTGCCCGATGGTTCGGGAAACTTTGTAATCTATAGTGACGCCTCCAAGAAGGGACTAGGTTGTGTCCTGATGCAGCAGGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATCCATGAGCAGAACTACCCTACCCATGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGATCATAAGAGCCTGAAGTACTTCTTCACCCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTTGAGTTGGTGAAAGACTACGACTGCGAGATCCTATACCACCCAGGTAAAGCGAATGTAGTGGCTGATGCGCTAAGTAGGAAAGTTGCACATTCAGCAGCGCTAATCACCAAGCAGACCCCCTTACTCAGGGACTTTGAGAGGGCAGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGGCTCAGTTGACAGTTCAGCCAACCTTGAGGCAAAAGATCATTGCTGCTCAGCTGAATGATCCTTATTTGGCAGAGAAGCGTCGCGTGGTAGAGACAGAGCAAGGTGAAGGCTTCTCCATATCCTCTGACGATGGCCTTATGTTTGAAGGACGCCTGTGTGTGCCGGAAGACAGCGCAGTTAAGACGGAGCTTTTGACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGATGTGGCAGACTTTGTCAGTAGATGCTTGGTGTGCCAGCAGGTGAAGGCACCTAGGCAGCATCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATGGATTTTATTACGGGACTGCCCAAGACCCTAAGGGGCTACACGGTGATCTGGGTCGTGGTCGACAGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGGCAGCTATATATGACAGAGATTGTGAGACTACATGGAGTACCCGTATCCATCATTTCAGACAGAGACGCCCGTTTCACATCGAAGTTCTGGAAAGGACTTCAAATTGCATTAGGTACAAGGTTGGACTTCAGCACGGCATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTAGAAGACATGCTGCGAGCCTGCGTACTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCTGATGGAGTTTGCCTATAACAACAGCTACCAGGCTACTATCGGTATGGCACCGTTCGAGGCTCTGTATGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGCCCCGAATTAGTGCAGACGACCAACGCAGCCATACAGAAGATCCGAGCTCGTATGCTGACAGCCCAGAGCAGACAGAAGAGTTACGCTGATGTACGACGTAAGGACCTCGAGTTTGAAGTGGGAGATATGGTCTTTCTGAAGGTTGCACCCATGAAGGGTGTTCTGAGGTTCGCAAAGAAGGGGAAGCTGAGCCCACGCTTCGTAGGGCCGTTCGAGATATTGGAGCGGATTGGCCCCGTGGCTTACCGCTTGGCGCTACCCCCATCGTTTGCTGCAGTGCACGACGTATTCCATATCTCCATGCTGAGGAAATATGTCGCAGACCCAACACATGTGGTGGACTTCGAGCCACTGCAGGTTAGCGAGAATCTGAGCTACGAGGAGCAGCCTGTCGAGGTCCTGGCAAGGGAGGTCAAGAAGCTTCGCAGTCGAGAAATTCCACTGGTCAAAATCCTTTGGCAAAACCATGGAGTGGAAGAGGCAACGTGGGAGAAAGAAGAGGACATTAGAGCCCAGCACCCCGAGCTGTTCGAGGATTAG

mRNA sequence

ATGGATCTGATGAACAGGGTGTTTAAGGAGTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTCATTTACTCAAAAACTGAGGCTGAGCACGAGGAGCACTTACACCAAGTTTTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCCGCAAAGATTGAAGCGGTGACCAACTGGACCCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAAGAAGGGAACCCCTTTTGTCTGGAGCCCAGCTTGCGAGAGGAGCTTTCAGGAGCTCAAACAGAAGCTAGTGACTGCACCGGTCCTGACAGTGCCCGATGGTTCGGGAAACTTTGTAATCTATAGTGACGCCTCCAAGAAGGGACTAGGTTGTGTCCTGATGCAGCAGGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATCCATGAGCAGAACTACCCTACCCATGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGATCATAAGAGCCTGAAGTACTTCTTCACCCAGAAGGACCCACGCTTCGTAGGGCCGTTCGAGATATTGGAGCGGATTGGCCCCGTGGCTTACCGCTTGGCGCTACCCCCATCGTTTGCTGCAGTGCACGACGTATTCCATATCTCCATGCTGAGGAAATATGTCGCAGACCCAACACATGTGGTGGACTTCGAGCCACTGCAGGTTAGCGAGAATCTGAGCTACGAGGAGCAGCCTGTCGAGGTCCTGGCAAGGGAGGTCAAGAAGCTTCGCAGTCGAGAAATTCCACTGGTCAAAATCCTTTGGCAAAACCATGGAGTGGAAGAGGCAACGTGGGAGAAAGAAGAGGACATTAGAGCCCAGCACCCCGAGCTGTTCGAGGATTAG

Coding sequence (CDS)

ATGGATCTGATGAACAGGGTGTTTAAGGAGTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTCATTTACTCAAAAACTGAGGCTGAGCACGAGGAGCACTTACACCAAGTTTTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCCGCAAAGATTGAAGCGGTGACCAACTGGACCCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAAGAAGGGAACCCCTTTTGTCTGGAGCCCAGCTTGCGAGAGGAGCTTTCAGGAGCTCAAACAGAAGCTAGTGACTGCACCGGTCCTGACAGTGCCCGATGGTTCGGGAAACTTTGTAATCTATAGTGACGCCTCCAAGAAGGGACTAGGTTGTGTCCTGATGCAGCAGGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATCCATGAGCAGAACTACCCTACCCATGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGATCATAAGAGCCTGAAGTACTTCTTCACCCAGAAGGACCCACGCTTCGTAGGGCCGTTCGAGATATTGGAGCGGATTGGCCCCGTGGCTTACCGCTTGGCGCTACCCCCATCGTTTGCTGCAGTGCACGACGTATTCCATATCTCCATGCTGAGGAAATATGTCGCAGACCCAACACATGTGGTGGACTTCGAGCCACTGCAGGTTAGCGAGAATCTGAGCTACGAGGAGCAGCCTGTCGAGGTCCTGGCAAGGGAGGTCAAGAAGCTTCGCAGTCGAGAAATTCCACTGGTCAAAATCCTTTGGCAAAACCATGGAGTGGAAGAGGCAACGTGGGAGAAAGAAGAGGACATTAGAGCCCAGCACCCCGAGCTGTTCGAGGATTAG

Protein sequence

MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKDPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPLQVSENLSYEEQPVEVLAREVKKLRSREIPLVKILWQNHGVEEATWEKEEDIRAQHPELFED

Homology

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BLAST of Pay0016908 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 4.5e-48
Identity = 96/241 (39.83%), Postives = 147/241 (61.00%), Query Frame = 0


Query: 4   MNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKV 63
           MN + +  L+   +V++DDI+++S +  EH + L  V E L    L  +  KCEF  ++ 
Sbjct: 349 MNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQET 408

Query: 64  TFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQ 123
           TFLGHV++ +G+  +P KIEA+  +  P+   EI++FLGL GYYR+F+ +F+ IA P+T+
Sbjct: 409 TFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMTK 468

Query: 124 LTKKGTPF-VWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQG 183
             KK       +P  + +F++LK  +   P+L VPD +  F + +DAS   LG VL Q G
Sbjct: 469 CLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGAVLSQDG 528

Query: 184 KVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKD 243
             ++Y SR L  HE NY T + EL A+V+A K +RHYL G   +I +DH+ L + +  KD
Sbjct: 529 HPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPLSWLYRMKD 588

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BLAST of Pay0016908 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.4e-44
Identity = 89/241 (36.93%), Postives = 142/241 (58.92%), Query Frame = 0


Query: 4   MNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKV 63
           MN + +  L+   +V++DDI+I+S +  EH   +  V   L    L  +  KCEF  ++ 
Sbjct: 348 MNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKCEFLKKEA 407

Query: 64  TFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQ 123
            FLGH+V+ +G+  +P K++A+ ++  P+   EIR+FLGL GYYR+F+ +++ IA P+T 
Sbjct: 408 NFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYADIAKPMTS 467

Query: 124 LTKKGTPF-VWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQG 183
             KK T           +F++LK  ++  P+L +PD    FV+ +DAS   LG VL Q G
Sbjct: 468 CLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALGAVLSQNG 527

Query: 184 KVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKD 243
             +++ SR L  HE NY   + EL A+V+A K +RHYL G +  I +DH+ L++    K+
Sbjct: 528 HPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPLRWLHNLKE 587

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BLAST of Pay0016908 vs. ExPASy Swiss-Prot
Match: P10401 (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.3e-39
Identity = 89/246 (36.18%), Postives = 141/246 (57.32%), Query Frame = 0


Query: 4   MNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKV 63
           ++ V +E +     V++DD++I+S+ E++H  H+  VL+ L    +     K  F+   V
Sbjct: 324 LDDVLREQIGKICYVYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKESV 383

Query: 64  TFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQ 123
            +LG +VS +G   DP K++A+  +  P  V ++RSFLGLA YYR F++DF+ IA P+T 
Sbjct: 384 EYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDFAAIARPITD 443

Query: 124 LTK-----------KGTPFVWSPACERSFQELKQKLVTAPV-LTVPDGSGNFVIYSDASK 183
           + K           K  P  ++     +FQ L+  L +  V L  PD    F + +DAS 
Sbjct: 444 ILKGENGSVSKHMSKKIPVEFNETQRNAFQRLRNILASEDVILKYPDFKKPFDLTTDASA 503

Query: 184 KGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEK-IQIYTD 237
            G+G VL Q+G+ +   SR LK  EQNY T++ EL A+V+AL   +++LYG + I I+TD
Sbjct: 504 SGIGAVLSQEGRPITMISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTD 563

[Close]

BLAST of Pay0016908 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.1e-37
Identity = 85/238 (35.71%), Postives = 134/238 (56.30%), Query Frame = 0


Query: 4   MNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKV 63
           +N +  E  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V
Sbjct: 549 INTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQV 608

Query: 64  TFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQ 123
            F+G+ +S +G +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  
Sbjct: 609 KFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNN 668

Query: 124 LTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK 183
           L KK   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+  
Sbjct: 669 LLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHD 728

Query: 184 -----VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSL 235
                 V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L
Sbjct: 729 DDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNL 786

[Close]

BLAST of Pay0016908 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.1e-37
Identity = 85/238 (35.71%), Postives = 134/238 (56.30%), Query Frame = 0


Query: 4   MNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKV 63
           +N +  E  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V
Sbjct: 549 INTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQV 608

Query: 64  TFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQ 123
            F+G+ +S +G +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  
Sbjct: 609 KFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNN 668

Query: 124 LTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK 183
           L KK   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+  
Sbjct: 669 LLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHD 728

Query: 184 -----VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSL 235
                 V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L
Sbjct: 729 DDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNL 786

[Close]

BLAST of Pay0016908 vs. ExPASy TrEMBL
Match: A0A5A7UUX8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1395G00080 PE=4 SV=1)

HSP 1 Score: 558.1 bits (1437), Expect = 2.6e-155
Identity = 344/708 (48.59%), Postives = 352/708 (49.72%), Query Frame = 0


Query: 1    MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL 60
            MDLMNRVFK+FLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL
Sbjct: 699  MDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL 758

Query: 61   RKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASP 120
            RKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSRIASP
Sbjct: 759  RKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASP 818

Query: 121  LTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ 180
            LTQLT+KGTPFVWSPACE SFQELKQKLVTAPVLTVPDGS NFVIYSDASKKGLGCVLMQ
Sbjct: 819  LTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSENFVIYSDASKKGLGCVLMQ 878

Query: 181  QGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQ 240
            QGKVVAYASRQLKIHEQNY THDLELAAVVFALK+WRHYLYGEKIQIYTDHKSLKYFFTQ
Sbjct: 879  QGKVVAYASRQLKIHEQNYLTHDLELAAVVFALKMWRHYLYGEKIQIYTDHKSLKYFFTQ 938

Query: 241  KD---------------------------------------------------------- 300
            K+                                                          
Sbjct: 939  KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITKQTPLLRDFERAE 998

Query: 301  ------------------------------------------------------------ 357
                                                                        
Sbjct: 999  IAVSVGEVTAQLAQLSVQPTLRQKIITAQLNDPYLVEKRRMVETGQGEDFSISSDDGLMF 1058

[Close]

BLAST of Pay0016908 vs. ExPASy TrEMBL
Match: A0A5A7TY28 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G00240 PE=4 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 7.0e-153
Identity = 349/765 (45.62%), Postives = 357/765 (46.67%), Query Frame = 0


Query: 1    MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL 60
            MDLMNRVFK+FLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL
Sbjct: 690  MDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL 749

Query: 61   RKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASP 120
            RKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASP
Sbjct: 750  RKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASP 809

Query: 121  LTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ 180
            LTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ
Sbjct: 810  LTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ 869

Query: 181  QGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQ 240
            QGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTD+KSLKYFFTQ
Sbjct: 870  QGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDYKSLKYFFTQ 929

Query: 241  KD---------------------------------------------------------- 300
            K+                                                          
Sbjct: 930  KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE 989

Query: 301  ------------------------------------------------------------ 358
                                                                        
Sbjct: 990  IVVSVEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGS 1049

[Close]

BLAST of Pay0016908 vs. ExPASy TrEMBL
Match: A0A5A7UHL7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G004390 PE=4 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 1.0e-151
Identity = 344/743 (46.30%), Postives = 353/743 (47.51%), Query Frame = 0


Query: 1    MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL 60
            MDLMNRVFK+FLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL
Sbjct: 694  MDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL 753

Query: 61   RKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASP 120
            RKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSRIASP
Sbjct: 754  RKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASP 813

Query: 121  LTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ 180
            LTQLT+KGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ
Sbjct: 814  LTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ 873

Query: 181  QGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQ 240
            QGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQ
Sbjct: 874  QGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQ 933

Query: 241  KD---------------------------------------------------------- 300
            K+                                                          
Sbjct: 934  KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE 993

Query: 301  ------------------------------------------------------------ 358
                                                                        
Sbjct: 994  IAVSLNDPYLAEKRYMVETGQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPF 1053

[Close]

BLAST of Pay0016908 vs. ExPASy TrEMBL
Match: A0A5A7V6R2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold827G00070 PE=4 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 5.0e-151
Identity = 349/772 (45.21%), Postives = 355/772 (45.98%), Query Frame = 0


Query: 1    MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL 60
            MDLMNRVFK+FLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL
Sbjct: 263  MDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL 322

Query: 61   RKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASP 120
            RKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSRIASP
Sbjct: 323  RKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASP 382

Query: 121  LTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ 180
            LTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ
Sbjct: 383  LTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ 442

Query: 181  QGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQ 240
            QGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQ
Sbjct: 443  QGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQ 502

Query: 241  KD---------------------------------------------------------- 300
            K+                                                          
Sbjct: 503  KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE 562

Query: 301  ------------------------------------------------------------ 358
                                                                        
Sbjct: 563  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEDFSISSDDGLMF 622

[Close]

BLAST of Pay0016908 vs. ExPASy TrEMBL
Match: A0A5A7V5X5 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00260 PE=4 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 5.0e-151
Identity = 349/774 (45.09%), Postives = 355/774 (45.87%), Query Frame = 0


Query: 1    MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL 60
            MDLMNRVFK+FLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL
Sbjct: 642  MDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL 701

Query: 61   RKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASP 120
            RKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSRIASP
Sbjct: 702  RKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASP 761

Query: 121  LTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ 180
            LTQLT+KG PFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ
Sbjct: 762  LTQLTRKGIPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ 821

Query: 181  QGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQ 240
            QGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQ
Sbjct: 822  QGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQ 881

Query: 241  KD---------------------------------------------------------- 300
            K+                                                          
Sbjct: 882  KELNMRQRRWLELVKDYDCEILYHPGKANLVADALSRKVAHSAALITKQTPLLRDFERAE 941

Query: 301  ------------------------------------------------------------ 358
                                                                        
Sbjct: 942  IAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQDSAVKTELLTEAHS 1001

[Close]

BLAST of Pay0016908 vs. NCBI nr
Match: KAA0059723.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 558.1 bits (1437), Expect = 5.3e-155
Identity = 344/708 (48.59%), Postives = 352/708 (49.72%), Query Frame = 0


Query: 1    MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL 60
            MDLMNRVFK+FLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL
Sbjct: 699  MDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL 758

Query: 61   RKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASP 120
            RKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSRIASP
Sbjct: 759  RKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASP 818

Query: 121  LTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ 180
            LTQLT+KGTPFVWSPACE SFQELKQKLVTAPVLTVPDGS NFVIYSDASKKGLGCVLMQ
Sbjct: 819  LTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSENFVIYSDASKKGLGCVLMQ 878

Query: 181  QGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQ 240
            QGKVVAYASRQLKIHEQNY THDLELAAVVFALK+WRHYLYGEKIQIYTDHKSLKYFFTQ
Sbjct: 879  QGKVVAYASRQLKIHEQNYLTHDLELAAVVFALKMWRHYLYGEKIQIYTDHKSLKYFFTQ 938

Query: 241  KD---------------------------------------------------------- 300
            K+                                                          
Sbjct: 939  KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITKQTPLLRDFERAE 998

Query: 301  ------------------------------------------------------------ 357
                                                                        
Sbjct: 999  IAVSVGEVTAQLAQLSVQPTLRQKIITAQLNDPYLVEKRRMVETGQGEDFSISSDDGLMF 1058

[Close]

BLAST of Pay0016908 vs. NCBI nr
Match: KAA0048442.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 550.1 bits (1416), Expect = 1.5e-152
Identity = 349/765 (45.62%), Postives = 357/765 (46.67%), Query Frame = 0


Query: 1    MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL 60
            MDLMNRVFK+FLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL
Sbjct: 690  MDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL 749

Query: 61   RKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASP 120
            RKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASP
Sbjct: 750  RKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASP 809

Query: 121  LTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ 180
            LTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ
Sbjct: 810  LTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ 869

Query: 181  QGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQ 240
            QGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTD+KSLKYFFTQ
Sbjct: 870  QGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDYKSLKYFFTQ 929

Query: 241  KD---------------------------------------------------------- 300
            K+                                                          
Sbjct: 930  KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE 989

Query: 301  ------------------------------------------------------------ 358
                                                                        
Sbjct: 990  IVVSVEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGS 1049

[Close]

BLAST of Pay0016908 vs. NCBI nr
Match: KAA0054634.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 546.2 bits (1406), Expect = 2.1e-151
Identity = 344/743 (46.30%), Postives = 353/743 (47.51%), Query Frame = 0


Query: 1    MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL 60
            MDLMNRVFK+FLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL
Sbjct: 694  MDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL 753

Query: 61   RKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASP 120
            RKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSRIASP
Sbjct: 754  RKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASP 813

Query: 121  LTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ 180
            LTQLT+KGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ
Sbjct: 814  LTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ 873

Query: 181  QGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQ 240
            QGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQ
Sbjct: 874  QGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQ 933

Query: 241  KD---------------------------------------------------------- 300
            K+                                                          
Sbjct: 934  KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE 993

Query: 301  ------------------------------------------------------------ 358
                                                                        
Sbjct: 994  IAVSLNDPYLAEKRYMVETGQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPF 1053

[Close]

BLAST of Pay0016908 vs. NCBI nr
Match: KAA0063793.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 543.9 bits (1400), Expect = 1.0e-150
Identity = 349/772 (45.21%), Postives = 355/772 (45.98%), Query Frame = 0


Query: 1    MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL 60
            MDLMNRVFK+FLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL
Sbjct: 263  MDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL 322

Query: 61   RKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASP 120
            RKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSRIASP
Sbjct: 323  RKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASP 382

Query: 121  LTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ 180
            LTQLT+KGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ
Sbjct: 383  LTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ 442

Query: 181  QGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQ 240
            QGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQ
Sbjct: 443  QGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQ 502

Query: 241  KD---------------------------------------------------------- 300
            K+                                                          
Sbjct: 503  KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAE 562

Query: 301  ------------------------------------------------------------ 358
                                                                        
Sbjct: 563  IAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGEDFSISSDDGLMF 622

[Close]

BLAST of Pay0016908 vs. NCBI nr
Match: KAA0061201.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 543.9 bits (1400), Expect = 1.0e-150
Identity = 349/774 (45.09%), Postives = 355/774 (45.87%), Query Frame = 0


Query: 1    MDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL 60
            MDLMNRVFK+FLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL
Sbjct: 642  MDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL 701

Query: 61   RKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASP 120
            RKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIRSFLGLAGYYRRFVEDFSRIASP
Sbjct: 702  RKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASP 761

Query: 121  LTQLTKKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ 180
            LTQLT+KG PFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ
Sbjct: 762  LTQLTRKGIPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ 821

Query: 181  QGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQ 240
            QGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQ
Sbjct: 822  QGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQ 881

Query: 241  KD---------------------------------------------------------- 300
            K+                                                          
Sbjct: 882  KELNMRQRRWLELVKDYDCEILYHPGKANLVADALSRKVAHSAALITKQTPLLRDFERAE 941

Query: 301  ------------------------------------------------------------ 358
                                                                        
Sbjct: 942  IAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQDSAVKTELLTEAHS 1001

[Close]

BLAST of Pay0016908 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 117.5 bits (293), Expect = 2.2e-26
Identity = 55/125 (44.00%), Postives = 78/125 (62.40%), Query Frame = 0


Query: 36  HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWTRPST 95
           HL  VL+    ++ YA   KC F   ++ +LG  H++S EGVS DPAK+EA+  W  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 96  VSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSFQELKQKLVTAPV 155
            +E+R FLGL GYYRRFV+++ +I  PLT+L KK +   W+     +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 156 LTVPD 159
           L +PD
Sbjct: 123 LALPD 126

The following BLAST results are available for this feature:

BLAST of Pay0016908 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	4.5e-48	39.83	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	1.4e-44	36.93	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P10401	1.3e-39	36.18	Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogas...	[more]
P0CT41	2.1e-37	35.71	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	2.1e-37	35.71	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Pay0016908 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UUX8	2.6e-155	48.59	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7TY28	7.0e-153	45.62	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61...	[more]
A0A5A7UHL7	1.0e-151	46.30	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24...	[more]
A0A5A7V6R2	5.0e-151	45.21	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82...	[more]
A0A5A7V5X5	5.0e-151	45.09	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00260 PE...	[more]

BLAST of Pay0016908 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0059723.1	5.3e-155	48.59	pol protein [Cucumis melo var. makuwa]	[more]
KAA0048442.1	1.5e-152	45.62	pol protein [Cucumis melo var. makuwa]	[more]
KAA0054634.1	2.1e-151	46.30	pol protein [Cucumis melo var. makuwa]	[more]
KAA0063793.1	1.0e-150	45.21	pol protein [Cucumis melo var. makuwa]	[more]
KAA0061201.1	1.0e-150	45.09	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Pay0016908 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	2.2e-26	44.00	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 4..69 e-value: 5.7E-11 score: 42.4
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 1..75 e-value: 1.5E-27 score: 98.0
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 80..171 e-value: 9.5E-33 score: 114.1
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 133..227 e-value: 5.9E-32 score: 109.7
None	No IPR available	PANTHER	PTHR24559:SF355	PROTEIN, PUTATIVE-RELATED	coord: 80..240
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 80..240
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 164..243 e-value: 2.44664E-38 score: 131.461
None	No IPR available	CDD	cd01647	RT_LTR	coord: 3..70 e-value: 3.6369E-29 score: 108.837
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..243
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 270..352

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0016908.1	Pay0016908.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity