Pay0016747 (gene) Melon (Payzawat) v1

Overview
NamePay0016747
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionEukaryotic translation initiation factor 3 subunit M
Locationchr01: 4004201 .. 4005943 (-)
RNA-Seq ExpressionPay0016747
SyntenyPay0016747
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTGCTGTAGGGCAACTGGAGAAGGATGCCAAATATTCATTGGTTTATCAGCTTCTGAAGATTTTTTTGACCCAGAGATTGGATGCTTACATGGAATTTCAAGCTGCAAATTCTTCTTTATTGAAAAGCTATGGTAAAATTCTCCACTTTAGTAATAACTTTAATAATTTCTAATTAGAGCTAAATTCTCCACTTTAGTAATAACTTTAATAATTTCTATTGAAAAGCTGCAAATTCCTGGATCTGGTGTAGGTCTCGTCCATGAAGATTGCATTGCAAAGATGAGGTTATTATCATTGGTAGATCTTGGCTCAAATGAATCTGCCCGTATTCCATATGCTCTCATCAAGGGTGTTACTTGTGTGTTACTTGTGCTTCAGATCAATGATGATGAGGTCGAACTGTGGGTCGTGAAGGCCATTACGTCCAAATTGATTGACTGCAAAATGGACCAGATGAACGAAGTTGTGATTGTGAGGTTTGTGCTATTCTCTATCTAGACCGCCACATTACACTTCTTTGGTTAGGCATAGCTTATTCTATACTAATATAATAACTCTTTTGATGTTCATGTTCCTTTACTTTTGTGTTTATTTTATTTGTGATTAAAAACCATTAAAAAGTCTATCAAGCTCGCATCAAAGAAATTGTTGCCTCTGCAGTTCGTGGATTCAATGTTGCCTCTGCAGTTCGCATCAAAGAAATTTACTTTTGTGGAAGGGGTTCTTTAGCAGGTTTCCCATCCTATCCCCCCAATTGAAGATAACTTGATCATTAACAGGTTTCTTTATTTTCTATCTTAATTTTTTATGGTTGTTCGCATAGGGAGTCTTGGACATCACCACCACAGAGGTCGCAGACTACTTAATTGGAGGTGTCATGACTTGAAGTGGATATTTTTATGGTTCTCTTCCCTTGAACAATATTTTAAATCTCTATGTTTCTCTCATCTCACAGGGTTCTCCTTTTTGCAAACTTGTTCGTGAAGTGCTTGTAGAGTTGGAGTTACCACATTTAGTACGTTGGTAAAGTCTCTTATACCGTTCATTTTTCAAGGCACACTATTATTAATTACATACACTCACTTATTAATATCGTCTAGGATCTTTGGATATAAATCTTTGTCAATATGGCAATGGCCTTTTAGGTGGTGTAAGCGGTAGAAGGAAAAAAGATTACTGAGTGTGAATATTGAGTATTAGTAAGAAAATATAGGCCTATACGAAAATGTTGCCATTTATATCTTATAGATGTACATTATCACTTCTTATTTTTTCTTAGTTCACTCTTAAGGCAATCGGACCACATATTCTCAACAGTTTGAGGAATTGTATTAAGTTTTTTTGGGATTTTTGAAGTTTGAGGAATTTTCTTAGTTTTTTTGAGGAATTTTCTTAGTTTTTTTGAAGTTTAGCATTTGAATTCGCAGGCTTTAAGGAATTGTATTAAGTTTTCTACGAGATTCTGGATTTTCATTTCCACTCTGTTTGGGATTTTTGGATGCTGTCGATTGGGTTTGCGGGATTGTTAGCTACTGGCTTTGCAGATTTGGAGGAATATATATTGGATGGGAGAAGAAGCATTTTCGAGACCTTTAAAATGTCGTGATCTTTGAATTTATATAATTCTGTTTGGTTGCAGTTAATTTTACAAGCGTGTTTTCATTGTTGGTGGAATCAGACTTGAATAATATGGGATTTATGTGCTTTAAGATATGAATGGGATTTATTGTTGCTTTAA

mRNA sequence

ATGCCTGCTGTAGGGCAACTGGAGAAGGATGCCAAATATTCATTGGTTTATCAGCTTCTGAAGATTTTTTTGACCCAGAGATTGGATGCTTACATGGAATTTCAAGCTGCAAATTCTTCTTTATTGAAAAGCTATGGTCTCGTCCATGAAGATTGCATTGCAAAGATGAGGTTATTATCATTGGTAGATCTTGGCTCAAATGAATCTGCCCGTATTCCATATGCTCTCATCAAGGGTGTTACTTGTGTGTTACTTGTGCTTCAGATCAATGATGATGAGGTCGAACTGTGGGTCGTGAAGGCCATTACGTCCAAATTGATTGACTGCAAAATGGACCAGATGAACGAAGTTGTGATTGTGAGATATGAATGGGATTTATTGTTGCTTTAA

Coding sequence (CDS)

ATGCCTGCTGTAGGGCAACTGGAGAAGGATGCCAAATATTCATTGGTTTATCAGCTTCTGAAGATTTTTTTGACCCAGAGATTGGATGCTTACATGGAATTTCAAGCTGCAAATTCTTCTTTATTGAAAAGCTATGGTCTCGTCCATGAAGATTGCATTGCAAAGATGAGGTTATTATCATTGGTAGATCTTGGCTCAAATGAATCTGCCCGTATTCCATATGCTCTCATCAAGGGTGTTACTTGTGTGTTACTTGTGCTTCAGATCAATGATGATGAGGTCGAACTGTGGGTCGTGAAGGCCATTACGTCCAAATTGATTGACTGCAAAATGGACCAGATGAACGAAGTTGTGATTGTGAGATATGAATGGGATTTATTGTTGCTTTAA

Protein sequence

MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIVRYEWDLLLL
Homology
[Close]
BLAST of Pay0016747 vs. ExPASy Swiss-Prot
Match: Q54KZ8 (Eukaryotic translation initiation factor 3 subunit M OS=Dictyostelium discoideum OX=44689 GN=eif3m PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.5e-20
Identity = 52/122 (42.62%), Postives = 85/122 (69.67%), Query Frame = 0 

Query: 1   MPAVGQLEKD--AKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRL 60
           +PAV  LE    +  SL Y+L+KIF T++LD++++FQ  N + L + GL ++DC+ K+RL
Sbjct: 237 LPAVQYLEGSTVSANSLTYELMKIFATEQLDSFLQFQQKNPNFLSTIGLSNDDCLQKIRL 296

Query: 61  LSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVV 120
           LSL  L ++E +++PY+LI        +LQI+++EVE+WV+ A+   L+D K+DQ+N +V
Sbjct: 297 LSLATL-TSEQSKVPYSLIS------KMLQIDENEVEMWVINAMEGDLLDAKLDQLNRIV 351

[Close]
BLAST of Pay0016747 vs. ExPASy Swiss-Prot
Match: Q7JVI3 (Eukaryotic translation initiation factor 3 subunit M OS=Drosophila melanogaster OX=7227 GN=eIF3m PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.3e-10
Identity = 37/104 (35.58%), Postives = 61/104 (58.65%), Query Frame = 0 

Query: 15  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPY 74
           L++ LL IF++++L AY++F   +   + S GL HE  + KMRLL+ + L  +       
Sbjct: 237 LIHDLLSIFVSEKLPAYVQFYEDHREFVNSQGLNHEQNMKKMRLLTFMQLAESSPEMTFE 296

Query: 75  ALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVV 119
            L K        LQIN+DEVE +V++ + +KL+  ++DQ N+ V
Sbjct: 297 TLTK-------ELQINEDEVEPFVIEVLKTKLVRARLDQANQKV 333

[Close]
BLAST of Pay0016747 vs. ExPASy Swiss-Prot
Match: B4HR14 (Eukaryotic translation initiation factor 3 subunit M OS=Drosophila sechellia OX=7238 GN=Tango7 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.3e-10
Identity = 37/104 (35.58%), Postives = 61/104 (58.65%), Query Frame = 0 

Query: 15  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPY 74
           L++ LL IF++++L AY++F   +   + S GL HE  + KMRLL+ + L  +       
Sbjct: 237 LIHDLLSIFVSEKLPAYVQFYEDHREFVNSQGLNHEQNMKKMRLLTFMQLAESSPEMTFE 296

Query: 75  ALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVV 119
            L K        LQIN+DEVE +V++ + +KL+  ++DQ N+ V
Sbjct: 297 TLTK-------ELQINEDEVEPFVIEVLKTKLVRARLDQANQKV 333

[Close]
BLAST of Pay0016747 vs. ExPASy Swiss-Prot
Match: B4QFD2 (Eukaryotic translation initiation factor 3 subunit M OS=Drosophila simulans OX=7240 GN=Tango7 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.3e-10
Identity = 37/104 (35.58%), Postives = 61/104 (58.65%), Query Frame = 0 

Query: 15  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPY 74
           L++ LL IF++++L AY++F   +   + S GL HE  + KMRLL+ + L  +       
Sbjct: 237 LIHDLLSIFVSEKLPAYVQFYEDHREFVNSQGLNHEQNMKKMRLLTFMQLAESSPEMTFE 296

Query: 75  ALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVV 119
            L K        LQIN+DEVE +V++ + +KL+  ++DQ N+ V
Sbjct: 297 TLTK-------ELQINEDEVEPFVIEVLKTKLVRARLDQANQKV 333

[Close]
BLAST of Pay0016747 vs. ExPASy Swiss-Prot
Match: B3NRC6 (Eukaryotic translation initiation factor 3 subunit M OS=Drosophila erecta OX=7220 GN=Tango7 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.9e-10
Identity = 37/104 (35.58%), Postives = 60/104 (57.69%), Query Frame = 0 

Query: 15  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPY 74
           L++ LL IF++++L AY++F   +   + S GL HE  + KMRLL+ + L  +       
Sbjct: 237 LIHDLLSIFVSEKLPAYVQFYEDHREFVNSQGLNHEQNMKKMRLLTFMQLAESSPEMTFE 296

Query: 75  ALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVV 119
            L K        LQIN+DEVE +V++ + +KL+  ++DQ N  V
Sbjct: 297 TLTK-------ELQINEDEVEPFVIEVLKTKLVRARLDQANHKV 333

[Close]
BLAST of Pay0016747 vs. ExPASy TrEMBL
Match: A0A1S4E653 (eukaryotic translation initiation factor 3 subunit M-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504517 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 8.1e-59
Identity = 121/122 (99.18%), Postives = 122/122 (100.00%), Query Frame = 0 

Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV
Sbjct: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120

Query: 121 RY 123
           R+
Sbjct: 121 RF 122

[Close]
BLAST of Pay0016747 vs. ExPASy TrEMBL
Match: A0A5A7UE08 (Eukaryotic translation initiation factor 3 subunit M-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G001100 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 9.0e-58
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 93  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 152

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV
Sbjct: 153 LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 212

[Close]
BLAST of Pay0016747 vs. ExPASy TrEMBL
Match: A0A1S3CSW1 (eukaryotic translation initiation factor 3 subunit M-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504517 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 9.0e-58
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV
Sbjct: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120

[Close]
BLAST of Pay0016747 vs. ExPASy TrEMBL
Match: A0A5A7TCS8 (Eukaryotic translation initiation factor 3 subunit M OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G002380 PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 9.6e-52
Identity = 120/156 (76.92%), Postives = 124/156 (79.49%), Query Frame = 0 

Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 244 MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 303

Query: 61  LVDLGSNESARIPYALIKGV---------TC-----------VLLVLQINDDEVELWVVK 120
           LVDLGSNESARIPYALIK           TC           VLLVLQINDDEVELWVVK
Sbjct: 304 LVDLGSNESARIPYALIKDTLQVKRNFRFTCFSFCVFFFLMWVLLVLQINDDEVELWVVK 363

Query: 121 AITSKLIDCKMDQMNEVVIV---------RYEWDLL 128
           AITSKLIDCKMDQMNEVVIV         +++W+ L
Sbjct: 364 AITSKLIDCKMDQMNEVVIVSRCTDRVFGQHQWETL 399

[Close]
BLAST of Pay0016747 vs. ExPASy TrEMBL
Match: A0A5D3BNN4 (Eukaryotic translation initiation factor 3 subunit M OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002400 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.1e-51
Identity = 114/136 (83.82%), Postives = 118/136 (86.76%), Query Frame = 0 

Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 244 MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 303

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDLGSNESARIPYALIK        LQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV
Sbjct: 304 LVDLGSNESARIPYALIKD------TLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 363

Query: 121 ---------RYEWDLL 128
                    +++W+ L
Sbjct: 364 SRCTDRVFGQHQWETL 373

[Close]
BLAST of Pay0016747 vs. NCBI nr
Match: XP_016903699.1 (PREDICTED: eukaryotic translation initiation factor 3 subunit M-like isoform X1 [Cucumis melo])

HSP 1 Score: 236.1 bits (601), Expect = 1.7e-58
Identity = 121/122 (99.18%), Postives = 122/122 (100.00%), Query Frame = 0 

Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV
Sbjct: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120

Query: 121 RY 123
           R+
Sbjct: 121 RF 122

[Close]
BLAST of Pay0016747 vs. NCBI nr
Match: KAA0053298.1 (eukaryotic translation initiation factor 3 subunit M-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 232.6 bits (592), Expect = 1.9e-57
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 93  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 152

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV
Sbjct: 153 LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 212

[Close]
BLAST of Pay0016747 vs. NCBI nr
Match: XP_008467080.1 (PREDICTED: eukaryotic translation initiation factor 3 subunit M-like isoform X2 [Cucumis melo])

HSP 1 Score: 232.6 bits (592), Expect = 1.9e-57
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV
Sbjct: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120

[Close]
BLAST of Pay0016747 vs. NCBI nr
Match: KAA0039431.1 (eukaryotic translation initiation factor 3 subunit M [Cucumis melo var. makuwa])

HSP 1 Score: 212.6 bits (540), Expect = 2.0e-51
Identity = 120/156 (76.92%), Postives = 124/156 (79.49%), Query Frame = 0 

Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 244 MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 303

Query: 61  LVDLGSNESARIPYALIKGV---------TC-----------VLLVLQINDDEVELWVVK 120
           LVDLGSNESARIPYALIK           TC           VLLVLQINDDEVELWVVK
Sbjct: 304 LVDLGSNESARIPYALIKDTLQVKRNFRFTCFSFCVFFFLMWVLLVLQINDDEVELWVVK 363

Query: 121 AITSKLIDCKMDQMNEVVIV---------RYEWDLL 128
           AITSKLIDCKMDQMNEVVIV         +++W+ L
Sbjct: 364 AITSKLIDCKMDQMNEVVIVSRCTDRVFGQHQWETL 399

[Close]
BLAST of Pay0016747 vs. NCBI nr
Match: TYK00620.1 (eukaryotic translation initiation factor 3 subunit M [Cucumis melo var. makuwa])

HSP 1 Score: 211.5 bits (537), Expect = 4.4e-51
Identity = 114/136 (83.82%), Postives = 118/136 (86.76%), Query Frame = 0 

Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS
Sbjct: 244 MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 303

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDLGSNESARIPYALIK        LQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV
Sbjct: 304 LVDLGSNESARIPYALIKD------TLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 363

Query: 121 ---------RYEWDLL 128
                    +++W+ L
Sbjct: 364 SRCTDRVFGQHQWETL 373

[Close]
BLAST of Pay0016747 vs. TAIR 10
Match: AT5G15610.1 (Proteasome component (PCI) domain protein )

HSP 1 Score: 171.0 bits (432), Expect = 6.2e-43
Identity = 90/127 (70.87%), Postives = 103/127 (81.10%), Query Frame = 0 

Query: 2   PAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSL 61
           PAV QLEKD   + VYQLLKIFLTQRLDAYMEFQ ANS  L++YGLV EDC+AKMRLLSL
Sbjct: 245 PAVAQLEKDPNNAPVYQLLKIFLTQRLDAYMEFQNANSGFLQTYGLVEEDCVAKMRLLSL 304

Query: 62  VDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIVR 121
           VDL S++S +IPYA IK        LQ+ND+EVELWVVKAIT+KL+ CKMDQMN+VVIVR
Sbjct: 305 VDLASDDSGKIPYASIKN------TLQVNDEEVELWVVKAITAKLVACKMDQMNQVVIVR 364

Query: 122 YEWDLLL 129
              +LLL
Sbjct: 365 QVSNLLL 365

[Close]
BLAST of Pay0016747 vs. TAIR 10
Match: AT3G02200.1 (Proteasome component (PCI) domain protein )

HSP 1 Score: 166.4 bits (420), Expect = 1.5e-41
Identity = 84/121 (69.42%), Postives = 100/121 (82.64%), Query Frame = 0 

Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           +PAV QLEKDAKY+ VYQLLKIFLTQRL+AY EFQ ANS  L+SYGL +EDC+ KMRLLS
Sbjct: 244 LPAVAQLEKDAKYAPVYQLLKIFLTQRLNAYTEFQNANSGFLQSYGLSNEDCVTKMRLLS 303

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDL S+ES +IPY  IK        LQ+N+ +VELW+VKAIT+KLI+CKMDQMN+V+IV
Sbjct: 304 LVDLASDESGKIPYTSIKD------TLQVNEQDVELWIVKAITAKLIECKMDQMNQVLIV 358

Query: 121 R 122
           R
Sbjct: 364 R 358

[Close]
BLAST of Pay0016747 vs. TAIR 10
Match: AT5G15610.2 (Proteasome component (PCI) domain protein )

HSP 1 Score: 166.4 bits (420), Expect = 1.5e-41
Identity = 86/119 (72.27%), Postives = 98/119 (82.35%), Query Frame = 0 

Query: 2   PAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSL 61
           PAV QLEKD   + VYQLLKIFLTQRLDAYMEFQ ANS  L++YGLV EDC+AKMRLLSL
Sbjct: 245 PAVAQLEKDPNNAPVYQLLKIFLTQRLDAYMEFQNANSGFLQTYGLVEEDCVAKMRLLSL 304

Query: 62  VDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 121
           VDL S++S +IPYA IK        LQ+ND+EVELWVVKAIT+KL+ CKMDQMN+VVIV
Sbjct: 305 VDLASDDSGKIPYASIKN------TLQVNDEEVELWVVKAITAKLVACKMDQMNQVVIV 357

[Close]
BLAST of Pay0016747 vs. TAIR 10
Match: AT3G02200.2 (Proteasome component (PCI) domain protein )

HSP 1 Score: 164.1 bits (414), Expect = 7.6e-41
Identity = 83/120 (69.17%), Postives = 99/120 (82.50%), Query Frame = 0 

Query: 1   MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLS 60
           +PAV QLEKDAKY+ VYQLLKIFLTQRL+AY EFQ ANS  L+SYGL +EDC+ KMRLLS
Sbjct: 244 LPAVAQLEKDAKYAPVYQLLKIFLTQRLNAYTEFQNANSGFLQSYGLSNEDCVTKMRLLS 303

Query: 61  LVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 120
           LVDL S+ES +IPY  IK        LQ+N+ +VELW+VKAIT+KLI+CKMDQMN+V+IV
Sbjct: 304 LVDLASDESGKIPYTSIKD------TLQVNEQDVELWIVKAITAKLIECKMDQMNQVLIV 357

The following BLAST results are available for this feature:
BLAST of Pay0016747 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q54KZ82.5e-2042.62Eukaryotic translation initiation factor 3 subunit M OS=Dictyostelium discoideum... [more]
Q7JVI32.3e-1035.58Eukaryotic translation initiation factor 3 subunit M OS=Drosophila melanogaster ... [more]
B4HR142.3e-1035.58Eukaryotic translation initiation factor 3 subunit M OS=Drosophila sechellia OX=... [more]
B4QFD22.3e-1035.58Eukaryotic translation initiation factor 3 subunit M OS=Drosophila simulans OX=7... [more]
B3NRC63.9e-1035.58Eukaryotic translation initiation factor 3 subunit M OS=Drosophila erecta OX=722... [more]
BLAST of Pay0016747 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4E6538.1e-5999.18eukaryotic translation initiation factor 3 subunit M-like isoform X1 OS=Cucumis ... [more]
A0A5A7UE089.0e-58100.00Eukaryotic translation initiation factor 3 subunit M-like isoform X2 OS=Cucumis ... [more]
A0A1S3CSW19.0e-58100.00eukaryotic translation initiation factor 3 subunit M-like isoform X2 OS=Cucumis ... [more]
A0A5A7TCS89.6e-5276.92Eukaryotic translation initiation factor 3 subunit M OS=Cucumis melo var. makuwa... [more]
A0A5D3BNN42.1e-5183.82Eukaryotic translation initiation factor 3 subunit M OS=Cucumis melo var. makuwa... [more]
BLAST of Pay0016747 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016903699.11.7e-5899.18PREDICTED: eukaryotic translation initiation factor 3 subunit M-like isoform X1 ... [more]
KAA0053298.11.9e-57100.00eukaryotic translation initiation factor 3 subunit M-like isoform X2 [Cucumis me... [more]
XP_008467080.11.9e-57100.00PREDICTED: eukaryotic translation initiation factor 3 subunit M-like isoform X2 ... [more]
KAA0039431.12.0e-5176.92eukaryotic translation initiation factor 3 subunit M [Cucumis melo var. makuwa][more]
TYK00620.14.4e-5183.82eukaryotic translation initiation factor 3 subunit M [Cucumis melo var. makuwa][more]
BLAST of Pay0016747 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G15610.16.2e-4370.87Proteasome component (PCI) domain protein [more]
AT3G02200.11.5e-4169.42Proteasome component (PCI) domain protein [more]
AT5G15610.21.5e-4172.27Proteasome component (PCI) domain protein [more]
AT3G02200.27.6e-4169.17Proteasome component (PCI) domain protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000717Proteasome component (PCI) domainPFAMPF01399PCIcoord: 17..120
e-value: 2.2E-9
score: 37.8
IPR000717Proteasome component (PCI) domainPROSITEPS50250PCIcoord: 1..125
score: 13.661217
NoneNo IPR availablePANTHERPTHR15350COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17coord: 1..121
NoneNo IPR availablePANTHERPTHR15350:SF2EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Mcoord: 1..121

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0016747.1Pay0016747.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001732 formation of cytoplasmic translation initiation complex
cellular_component GO:0016282 eukaryotic 43S preinitiation complex
cellular_component GO:0033290 eukaryotic 48S preinitiation complex
cellular_component GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003743 translation initiation factor activity