Pay0016673 (gene) Melon (Payzawat) v1

Overview


Name	Pay0016673
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	LOW QUALITY PROTEIN: uncharacterized protein LOC111469947
Location	chr12: 3966775 .. 3968137 (-)
RNA-Seq Expression	Pay0016673
Synteny	Pay0016673

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCATTAGAGAGGGAGAAATTGTAACCGACGATAAAGCAGAAGATGAGCTTGTAAGGGACGAACATGATGAAAGTGAAAGTGACCAGAATCATGAAGAGGATCCCACTAATATAACCTTAGTCACTAGGAGAGCTTTAAACACCCATATTAAAGAGGATAGTCTATACCAACGCGAAAACTTGTTTCACACTAGATGCCTTTTTCAATCCATACCTTGTAGTGTGGTCATTGATAGTGGTAGTTGCACCAATGTTTTGAGTTCTATTTTGGTCAAGAGACTTAATTTAGAGACCAAACCACATCCTATGCCTTACAAACTTCAATGGTTGAATGATTGTGCGGAAGTTCGGGTAACTAAGCAAGCTCTTGTGTCTTTTTCTATTCACTAGAAGAAATTTGGCCTTTGATGTCGGGTGAAAAAAATGAAAAATGAGCTTTAATATCGATTTTCAAAAGGCGGATGTTTAATGTCGGTTTTAAACCGACGTTAAAGATAAAATTTTAATGTCGGTTTAAAACCAACATTAAACATCCTGCTTTCTGAGAACCGACATTAAAGCTCTTTTTTATTATTTTTTATTTTTTTATTTTTAAAAAATTAAAGCTTTTCTCTCTCTTACTTTACCCTTTTCTCAAAACCACCATGTAAATATAATGCCTCTTATAATTCCTTCGCAATTCTTTGCAATGTTCCGTGTCTCGACCTCTCCAAATTTCCTTACAAGTCTCTCATTCGCACCGTTTTTGAATCATTTCTTCAAGAATGTTATGAACAATGCCCTTAAAACCAACTTGTGGATGCCTCTACAACTACGAAGAAGGGGTACAACGACAATAGCGATCTCATTGTTTGCTGGGTTTGTGTGTTTTTTCCTGCCTCTTCTCGTTTATAGTAGCTTGTGATTGTATTTTCTTTTTTCTATTATGTTTTTTATGAAATTTGAAAATTTGGTGTTATTTGGCTCAGTTATCAATCAAGAGGAAGGTGACGATTCAGGATTTTAAAGGGAAGACTTTGGTTTTGATTATGAAGTTTTATATAAATTAGGATGGGAAAGACCTAGTTCTCAATGGATAAAGGAGATTCTGATCCAAATTTTATTTTACTTGTGTTTATGGATTTTTGTGTGTTAATATATTACTTACAGAGACTGCAAATTAGGCAAAACTCTTGTCAATTTTTTATGGTGGTTCATGTCTTGACCGTTCTCTCTTTTATTGCATTATAGGTCAAAGTTGGTGAGCTTGAGACAGAACTAGTTGAGATAAATGCAAATAATGTGAAGTTATAGTGTTCCTACAATGAACTTGTGGAGTATAAGCTTATTATGCAGAAGGGAACCCTTTGTTGTAATGTAG

mRNA sequence

ATGACCATTAGAGAGGGAGAAATTGTAACCGACGATAAAGCAGAAGATGAGCTTGTAAGGGACGAACATGATGAAAGTGAAAGTGACCAGAATCATGAAGAGGATCCCACTAATATAACCTTAGTCACTAGGAGAGCTTTAAACACCCATATTAAAGAGGATAGTCTATACCAACGCGAAAACTTGTTTCACACTAGATGCCTTTTTCAATCCATACCTTGTAGTGTGGTCATTGATAGTGGTAGTTGCACCAATGTTTTGAGTTCTATTTTGGTCAAGAGACTTAATTTAGAGACCAAACCACATCCTATGCCTTACAAACTTCAATGGTTGAATGATTGTGCGGAAGTTCGGTTATCAATCAAGAGGAAGGTGACGATTCAGGATTTTAAAGGGAAGACTTTGGTTTTGATTATGAATATAAGCTTATTATGCAGAAGGGAACCCTTTGTTGTAATGTAG

Coding sequence (CDS)

ATGACCATTAGAGAGGGAGAAATTGTAACCGACGATAAAGCAGAAGATGAGCTTGTAAGGGACGAACATGATGAAAGTGAAAGTGACCAGAATCATGAAGAGGATCCCACTAATATAACCTTAGTCACTAGGAGAGCTTTAAACACCCATATTAAAGAGGATAGTCTATACCAACGCGAAAACTTGTTTCACACTAGATGCCTTTTTCAATCCATACCTTGTAGTGTGGTCATTGATAGTGGTAGTTGCACCAATGTTTTGAGTTCTATTTTGGTCAAGAGACTTAATTTAGAGACCAAACCACATCCTATGCCTTACAAACTTCAATGGTTGAATGATTGTGCGGAAGTTCGGTTATCAATCAAGAGGAAGGTGACGATTCAGGATTTTAAAGGGAAGACTTTGGTTTTGATTATGAATATAAGCTTATTATGCAGAAGGGAACCCTTTGTTGTAATGTAG

Protein sequence

MTIREGEIVTDDKAEDELVRDEHDESESDQNHEEDPTNITLVTRRALNTHIKEDSLYQRENLFHTRCLFQSIPCSVVIDSGSCTNVLSSILVKRLNLETKPHPMPYKLQWLNDCAEVRLSIKRKVTIQDFKGKTLVLIMNISLLCRREPFVVM

Homology

[Close]

BLAST of Pay0016673 vs. ExPASy TrEMBL
Match: A0A6J1I8S0 (uncharacterized protein LOC111472489 OS=Cucurbita maxima OX=3661 GN=LOC111472489 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.8e-41
Identity = 92/120 (76.67%), Postives = 106/120 (88.33%), Query Frame = 0


Query: 1   MTIREGEIVTDDKAEDELVRDEHDESESDQNHEEDPTNITLVTRRALNTHIKEDSLYQRE 60
           MTI+EGEIVTDD+A D+ + +E DESE  +  EEDPT+I+LVTRRALNTHIKED L QRE
Sbjct: 200 MTIKEGEIVTDDEAHDD-INEETDESE--EFSEEDPTHISLVTRRALNTHIKEDGLDQRE 259

Query: 61  NLFHTRCLFQSIPCSVVIDSGSCTNVLSSILVKRLNLETKPHPMPYKLQWLNDCAEVRLS 120
           NLF TRCL QS+PCSVVIDSGSCTNV+SSILVKRLNL+T+PHP PYKLQWLNDC EVR++
Sbjct: 260 NLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQPHPRPYKLQWLNDCGEVRVT 316

[Close]

BLAST of Pay0016673 vs. ExPASy TrEMBL
Match: A0A6J1G2Q3 (uncharacterized protein LOC111450286 OS=Cucurbita moschata OX=3662 GN=LOC111450286 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.8e-41
Identity = 92/120 (76.67%), Postives = 106/120 (88.33%), Query Frame = 0


Query: 1   MTIREGEIVTDDKAEDELVRDEHDESESDQNHEEDPTNITLVTRRALNTHIKEDSLYQRE 60
           MTI+EGEIVTDD+A D+ + +E DESE  +  EEDPT+I+LVTRRALNTHIKED L QRE
Sbjct: 200 MTIKEGEIVTDDEAHDD-INEETDESE--EFSEEDPTHISLVTRRALNTHIKEDGLDQRE 259

Query: 61  NLFHTRCLFQSIPCSVVIDSGSCTNVLSSILVKRLNLETKPHPMPYKLQWLNDCAEVRLS 120
           NLF TRCL QS+PCSVVIDSGSCTNV+SSILVKRLNL+T+PHP PYKLQWLNDC EVR++
Sbjct: 260 NLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQPHPRPYKLQWLNDCGEVRVT 316

[Close]

BLAST of Pay0016673 vs. ExPASy TrEMBL
Match: A0A6J1EVV9 (uncharacterized protein LOC111436463 OS=Cucurbita moschata OX=3662 GN=LOC111436463 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.8e-41
Identity = 92/120 (76.67%), Postives = 106/120 (88.33%), Query Frame = 0


Query: 1   MTIREGEIVTDDKAEDELVRDEHDESESDQNHEEDPTNITLVTRRALNTHIKEDSLYQRE 60
           MTI+EGEIVTDD+A D+ + +E DESE  +  EEDPT+I+LVTRRALNTHIKED L QRE
Sbjct: 200 MTIKEGEIVTDDEAHDD-INEETDESE--EFSEEDPTHISLVTRRALNTHIKEDGLDQRE 259

Query: 61  NLFHTRCLFQSIPCSVVIDSGSCTNVLSSILVKRLNLETKPHPMPYKLQWLNDCAEVRLS 120
           NLF TRCL QS+PCSVVIDSGSCTNV+SSILVKRLNL+T+PHP PYKLQWLNDC EVR++
Sbjct: 260 NLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQPHPRPYKLQWLNDCGEVRVT 316

[Close]

BLAST of Pay0016673 vs. ExPASy TrEMBL
Match: A0A6J1EQJ1 (uncharacterized protein LOC111436530 OS=Cucurbita moschata OX=3662 GN=LOC111436530 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.8e-41
Identity = 92/120 (76.67%), Postives = 106/120 (88.33%), Query Frame = 0


Query: 1   MTIREGEIVTDDKAEDELVRDEHDESESDQNHEEDPTNITLVTRRALNTHIKEDSLYQRE 60
           MTI+EGEIVTDD+A D+ + +E DESE  +  EEDPT+I+LVTRRALNTHIKED L QRE
Sbjct: 200 MTIKEGEIVTDDEAHDD-INEETDESE--EFSEEDPTHISLVTRRALNTHIKEDGLDQRE 259

Query: 61  NLFHTRCLFQSIPCSVVIDSGSCTNVLSSILVKRLNLETKPHPMPYKLQWLNDCAEVRLS 120
           NLF TRCL QS+PCSVVIDSGSCTNV+SSILVKRLNL+T+PHP PYKLQWLNDC EVR++
Sbjct: 260 NLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQPHPRPYKLQWLNDCGEVRVT 316

[Close]

BLAST of Pay0016673 vs. ExPASy TrEMBL
Match: A0A6J1DWQ2 (uncharacterized protein LOC111025226 OS=Momordica charantia OX=3673 GN=LOC111025226 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 6.9e-41
Identity = 84/120 (70.00%), Postives = 107/120 (89.17%), Query Frame = 0


Query: 1   MTIREGEIVTDDKAEDELVRDEHDESESDQNHEEDPTNITLVTRRALNTHIKEDSLYQRE 60
           M +REGE+VTDD+ EDE++  E+++ +S++  EED T+++LVTRRAL+T +KEDSL QRE
Sbjct: 1   MVLREGELVTDDEEEDEVIEKENEDCDSEEYSEEDLTHMSLVTRRALSTQVKEDSLDQRE 60

Query: 61  NLFHTRCLFQSIPCSVVIDSGSCTNVLSSILVKRLNLETKPHPMPYKLQWLNDCAEVRLS 120
           NLFHTRCL QS+PCS+VIDSGSCTNV+SSILVKRLNLETKPHP P+KLQWL+DC EVR++
Sbjct: 61  NLFHTRCLVQSVPCSMVIDSGSCTNVVSSILVKRLNLETKPHPRPHKLQWLSDCGEVRVN 120

[Close]

BLAST of Pay0016673 vs. NCBI nr
Match: XP_023520282.1 (uncharacterized protein LOC111783592 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 178.7 bits (452), Expect = 3.8e-41
Identity = 92/120 (76.67%), Postives = 106/120 (88.33%), Query Frame = 0


Query: 1   MTIREGEIVTDDKAEDELVRDEHDESESDQNHEEDPTNITLVTRRALNTHIKEDSLYQRE 60
           MTI+EGEIVTDD+A D+ + +E DESE  +  EEDPT+I+LVTRRALNTHIKED L QRE
Sbjct: 362 MTIKEGEIVTDDEAHDD-INEETDESE--EFSEEDPTHISLVTRRALNTHIKEDGLDQRE 421

Query: 61  NLFHTRCLFQSIPCSVVIDSGSCTNVLSSILVKRLNLETKPHPMPYKLQWLNDCAEVRLS 120
           NLF TRCL QS+PCSVVIDSGSCTNV+SSILVKRLNL+T+PHP PYKLQWLNDC EVR++
Sbjct: 422 NLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQPHPRPYKLQWLNDCGEVRVT 478

[Close]

BLAST of Pay0016673 vs. NCBI nr
Match: XP_023530046.1 (uncharacterized protein LOC111792716 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 178.7 bits (452), Expect = 3.8e-41
Identity = 92/120 (76.67%), Postives = 106/120 (88.33%), Query Frame = 0


Query: 1   MTIREGEIVTDDKAEDELVRDEHDESESDQNHEEDPTNITLVTRRALNTHIKEDSLYQRE 60
           MTI+EGEIVTDD+A D+ + +E DESE  +  EEDPT+I+LVTRRALNTHIKED L QRE
Sbjct: 163 MTIKEGEIVTDDEAHDD-INEETDESE--EFSEEDPTHISLVTRRALNTHIKEDGLDQRE 222

Query: 61  NLFHTRCLFQSIPCSVVIDSGSCTNVLSSILVKRLNLETKPHPMPYKLQWLNDCAEVRLS 120
           NLF TRCL QS+PCSVVIDSGSCTNV+SSILVKRLNL+T+PHP PYKLQWLNDC EVR++
Sbjct: 223 NLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQPHPRPYKLQWLNDCGEVRVT 279

[Close]

BLAST of Pay0016673 vs. NCBI nr
Match: XP_022930025.1 (uncharacterized protein LOC111436463, partial [Cucurbita moschata])

HSP 1 Score: 178.7 bits (452), Expect = 3.8e-41
Identity = 92/120 (76.67%), Postives = 106/120 (88.33%), Query Frame = 0


Query: 1   MTIREGEIVTDDKAEDELVRDEHDESESDQNHEEDPTNITLVTRRALNTHIKEDSLYQRE 60
           MTI+EGEIVTDD+A D+ + +E DESE  +  EEDPT+I+LVTRRALNTHIKED L QRE
Sbjct: 200 MTIKEGEIVTDDEAHDD-INEETDESE--EFSEEDPTHISLVTRRALNTHIKEDGLDQRE 259

Query: 61  NLFHTRCLFQSIPCSVVIDSGSCTNVLSSILVKRLNLETKPHPMPYKLQWLNDCAEVRLS 120
           NLF TRCL QS+PCSVVIDSGSCTNV+SSILVKRLNL+T+PHP PYKLQWLNDC EVR++
Sbjct: 260 NLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQPHPRPYKLQWLNDCGEVRVT 316

[Close]

BLAST of Pay0016673 vs. NCBI nr
Match: XP_023520835.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111784339 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 178.7 bits (452), Expect = 3.8e-41
Identity = 92/120 (76.67%), Postives = 106/120 (88.33%), Query Frame = 0


Query: 1   MTIREGEIVTDDKAEDELVRDEHDESESDQNHEEDPTNITLVTRRALNTHIKEDSLYQRE 60
           MTI+EGEIVTDD+A D+ + +E DESE  +  EEDPT+I+LVTRRALNTHIKED L QRE
Sbjct: 362 MTIKEGEIVTDDEAHDD-INEETDESE--EFSEEDPTHISLVTRRALNTHIKEDGLDQRE 421

Query: 61  NLFHTRCLFQSIPCSVVIDSGSCTNVLSSILVKRLNLETKPHPMPYKLQWLNDCAEVRLS 120
           NLF TRCL QS+PCSVVIDSGSCTNV+SSILVKRLNL+T+PHP PYKLQWLNDC EVR++
Sbjct: 422 NLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQPHPRPYKLQWLNDCGEVRVT 478

[Close]

BLAST of Pay0016673 vs. NCBI nr
Match: XP_022946091.1 (uncharacterized protein LOC111450286, partial [Cucurbita moschata])

HSP 1 Score: 178.7 bits (452), Expect = 3.8e-41
Identity = 92/120 (76.67%), Postives = 106/120 (88.33%), Query Frame = 0


Query: 1   MTIREGEIVTDDKAEDELVRDEHDESESDQNHEEDPTNITLVTRRALNTHIKEDSLYQRE 60
           MTI+EGEIVTDD+A D+ + +E DESE  +  EEDPT+I+LVTRRALNTHIKED L QRE
Sbjct: 200 MTIKEGEIVTDDEAHDD-INEETDESE--EFSEEDPTHISLVTRRALNTHIKEDGLDQRE 259

Query: 61  NLFHTRCLFQSIPCSVVIDSGSCTNVLSSILVKRLNLETKPHPMPYKLQWLNDCAEVRLS 120
           NLF TRCL QS+PCSVVIDSGSCTNV+SSILVKRLNL+T+PHP PYKLQWLNDC EVR++
Sbjct: 260 NLFQTRCLVQSVPCSVVIDSGSCTNVVSSILVKRLNLKTQPHPRPYKLQWLNDCGEVRVT 316

The following BLAST results are available for this feature:

BLAST of Pay0016673 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0016673 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I8S0	1.8e-41	76.67	uncharacterized protein LOC111472489 OS=Cucurbita maxima OX=3661 GN=LOC111472489...	[more]
A0A6J1G2Q3	1.8e-41	76.67	uncharacterized protein LOC111450286 OS=Cucurbita moschata OX=3662 GN=LOC1114502...	[more]
A0A6J1EVV9	1.8e-41	76.67	uncharacterized protein LOC111436463 OS=Cucurbita moschata OX=3662 GN=LOC1114364...	[more]
A0A6J1EQJ1	1.8e-41	76.67	uncharacterized protein LOC111436530 OS=Cucurbita moschata OX=3662 GN=LOC1114365...	[more]
A0A6J1DWQ2	6.9e-41	70.00	uncharacterized protein LOC111025226 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of Pay0016673 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023520282.1	3.8e-41	76.67	uncharacterized protein LOC111783592 [Cucurbita pepo subsp. pepo]	[more]
XP_023530046.1	3.8e-41	76.67	uncharacterized protein LOC111792716 [Cucurbita pepo subsp. pepo]	[more]
XP_022930025.1	3.8e-41	76.67	uncharacterized protein LOC111436463, partial [Cucurbita moschata]	[more]
XP_023520835.1	3.8e-41	76.67	LOW QUALITY PROTEIN: uncharacterized protein LOC111784339 [Cucurbita pepo subsp....	[more]
XP_022946091.1	3.8e-41	76.67	uncharacterized protein LOC111450286, partial [Cucurbita moschata]	[more]

BLAST of Pay0016673 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 43..144 e-value: 1.6E-6 score: 29.8
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 59..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	PANTHER	PTHR35046	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN	coord: 4..122
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 65..136 e-value: 1.24813E-9 score: 50.4128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0016673.1	Pay0016673.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding