Pay0016664 (gene) Melon (Payzawat) v1

Overview


Name	Pay0016664
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Reverse transcriptase
Location	chr05: 17782470 .. 17783766 (-)
RNA-Seq Expression	Pay0016664
Synteny	Pay0016664

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCACCACGTACTGGTAGACGACGTCGGCAGAATCAGAACGGGATGCAAGGTCCTACCCAAGGTCCATCTGTAGGGGAATCTAGTACCCTAGGAGTTTGAGGTGGTGCAGGAAATAGGAAGGCCAGATAGAGCAGAGCTTAGTGATCCAGAAAAGGCATACGGAATTGAACGACTGAAGAAGTTAGGAGCTACAGTGTTTGAAGGTTCCACAGATCCAGCTGATGCAGAGAACTGGCTGAATATGCTTGAAAAGTGTTTTGATGTGATGAATTGTCCTGAGGAGCGAAAGGTTAGATTGGCCACATTTTTGTTGCAAAAAGAGGCTGAAGGATGGTGGAAATCTATATTAGCAAGACGCAGTGATGCACGTGGTTTAGACTGGCAGACTTTTAGAGGCATATTCGAAGATAAGTATTATCCCAGCACATACTGCGAAGCCAAGAGGGATGAATTTCTGGGGTTGAAACAAGGATCACTTTCAGTGGCTGAGTATGAGAGGAAGTATACCGAGCTTTCACGGTATGCTGACGTTATTATAGCTTCTGAGAGTGACAGGTGCCGAAGGTTTGAAAGAGGGTTGCGTTTTGAAATACGTACCCCAGTTACAGCCATTGCTAAGTGGACGAATTTCTCTCAGTTAGTGGAGACTGCCCTTCGTGTGGAGCAGAGTATAACAGAAGAGAAATTGGCAGTGGAGCTTAGTCGTGGGACTTCAACAGCTAGTGGATTTAGAGGCCGTGAGCAGCGGAGGTTCACGCCTGGGATAAATATTTCAAGCCGTCAAGATTTTAAGAATCGCTTTGGAGGCCAAGCATCGAGGAACGTGAGTTATGGTAGTGTTTTTCAGAGACAGAGCCAGAGAATACCTAGTCAACCCATTAGATCAACAGTAAGATCGCAACCAGGTCAGGAGTCCATTGCTAGTACCGTTAGGCGAATACCATGCACGAGTTGTGGCAGGAACCATCGGGGTCAGTGTTTGGTAGGTGCCGGTGTATGTTACCAGTGCGGACAGCCAGGACATTTCAAGAAAGATTGTCCGCAGTTGAACATGACAGTTCAGAGAGATCAGGGAGTTGGGTCCCAGACAGTTGAGCAATCGAGAGTTTCAGTGGTTCCAACAGAGGGCACCAGTGGTGCAAGGCAAAAGGGAGTTGTTGGAAGACCGAGGCAACAGGGAAAAGTCTATGCTATGACTCAACAAGAAGCAGAGGACGCACCAGAAATTATTACTGGTACGATTCTTAATAGAGGACGCACCAGACGTTATTACTGGTACGATTCTTATTTGTAA

mRNA sequence

ATGCCACCACGTACTGGTAGACGACGTCGGCAGAATCAGAACGGGATGCAAGGTCCTACCCAAGGTCCATCTGTAGGGGAATCTACAGAGCTTAGTGATCCAGAAAAGGCATACGGAATTGAACGACTGAAGAAGTTAGGAGCTACAGTGTTTGAAGGTTCCACAGATCCAGCTGATGCAGAGAACTGGCTGAATATGCTTGAAAAGTGTTTTGATGTGATGAATTGTCCTGAGGAGCGAAAGGTTAGATTGGCCACATTTTTGTTGCAAAAAGAGGCTGAAGGATGGTGGAAATCTATATTAGCAAGACGCAGTGATGCACGTGGTTTAGACTGGCAGACTTTTAGAGGCATATTCGAAGATAAGTATTATCCCAGCACATACTGCGAAGCCAAGAGGGATGAATTTCTGGGGTTGAAACAAGGATCACTTTCAGTGGCTGAGTATGAGAGGAAGTATACCGAGCTTTCACGGTATGCTGACGTTATTATAGCTTCTGAGAGTGACAGGTGCCGAAGGTTTGAAAGAGGGTTGCGTTTTGAAATACGTACCCCAGTTACAGCCATTGCTAAGTGGACGAATTTCTCTCAGTTAGTGGAGACTGCCCTTCGTGTGGAGCAGAGTATAACAGAAGAGAAATTGGCAGTGGAGCTTAGTCGTGGGACTTCAACAGCTAGTGGATTTAGAGGCCGTGAGCAGCGGAGGTTCACGCCTGGGATAAATATTTCAAGCCGTCAAGATTTTAAGAATCGCTTTGGAGGCCAAGCATCGAGGAACGTGAGTTATGGTAGTGTTTTTCAGAGACAGAGCCAGAGAATACCTAGTCAACCCATTAGATCAACAGTAAGATCGCAACCAGGTCAGGAGTCCATTGCTAGTACCGTTAGGCGAATACCATGCACGAGTTGTGGCAGGAACCATCGGGGTCAGTGTTTGGTAGGTGCCGGTGTATGTTACCAGTGCGGACAGCCAGGACATTTCAAGAAAGATTGTCCGCAGTTGAACATGACAGTTCAGAGAGATCAGGGAGTTGGGTCCCAGACAGTTGAGCAATCGAGAGTTTCAGTGGTTCCAACAGAGGGCACCAGTGGTGCAAGGCAAAAGGGAGTTGTTGGAAGACCGAGGCAACAGGGAAAAGTCTATGCTATGACTCAACAAGAAGCAGAGGACGCACCAGAAATTATTACTGGTACGATTCTTAATAGAGGACGCACCAGACGTTATTACTGGTACGATTCTTATTTGTAA

Coding sequence (CDS)

ATGCCACCACGTACTGGTAGACGACGTCGGCAGAATCAGAACGGGATGCAAGGTCCTACCCAAGGTCCATCTGTAGGGGAATCTACAGAGCTTAGTGATCCAGAAAAGGCATACGGAATTGAACGACTGAAGAAGTTAGGAGCTACAGTGTTTGAAGGTTCCACAGATCCAGCTGATGCAGAGAACTGGCTGAATATGCTTGAAAAGTGTTTTGATGTGATGAATTGTCCTGAGGAGCGAAAGGTTAGATTGGCCACATTTTTGTTGCAAAAAGAGGCTGAAGGATGGTGGAAATCTATATTAGCAAGACGCAGTGATGCACGTGGTTTAGACTGGCAGACTTTTAGAGGCATATTCGAAGATAAGTATTATCCCAGCACATACTGCGAAGCCAAGAGGGATGAATTTCTGGGGTTGAAACAAGGATCACTTTCAGTGGCTGAGTATGAGAGGAAGTATACCGAGCTTTCACGGTATGCTGACGTTATTATAGCTTCTGAGAGTGACAGGTGCCGAAGGTTTGAAAGAGGGTTGCGTTTTGAAATACGTACCCCAGTTACAGCCATTGCTAAGTGGACGAATTTCTCTCAGTTAGTGGAGACTGCCCTTCGTGTGGAGCAGAGTATAACAGAAGAGAAATTGGCAGTGGAGCTTAGTCGTGGGACTTCAACAGCTAGTGGATTTAGAGGCCGTGAGCAGCGGAGGTTCACGCCTGGGATAAATATTTCAAGCCGTCAAGATTTTAAGAATCGCTTTGGAGGCCAAGCATCGAGGAACGTGAGTTATGGTAGTGTTTTTCAGAGACAGAGCCAGAGAATACCTAGTCAACCCATTAGATCAACAGTAAGATCGCAACCAGGTCAGGAGTCCATTGCTAGTACCGTTAGGCGAATACCATGCACGAGTTGTGGCAGGAACCATCGGGGTCAGTGTTTGGTAGGTGCCGGTGTATGTTACCAGTGCGGACAGCCAGGACATTTCAAGAAAGATTGTCCGCAGTTGAACATGACAGTTCAGAGAGATCAGGGAGTTGGGTCCCAGACAGTTGAGCAATCGAGAGTTTCAGTGGTTCCAACAGAGGGCACCAGTGGTGCAAGGCAAAAGGGAGTTGTTGGAAGACCGAGGCAACAGGGAAAAGTCTATGCTATGACTCAACAAGAAGCAGAGGACGCACCAGAAATTATTACTGGTACGATTCTTAATAGAGGACGCACCAGACGTTATTACTGGTACGATTCTTATTTGTAA

Protein sequence

MPPRTGRRRRQNQNGMQGPTQGPSVGESTELSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARGLDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKLAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRFGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEAEDAPEIITGTILNRGRTRRYYWYDSYL

Homology

[Close]

BLAST of Pay0016664 vs. ExPASy TrEMBL
Match: A0A5A7U2V7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00630 PE=4 SV=1)

HSP 1 Score: 768.1 bits (1982), Expect = 1.9e-218
Identity = 390/426 (91.55%), Postives = 395/426 (92.72%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQNGMQGPTQGPSVGESTEL--------------------------SDP 60
           MPPRTGRRRRQNQ+GMQGPTQGPSVGES+ L                          SDP
Sbjct: 1   MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 60

Query: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120

Query: 121 GWWKSILARRSDARGLDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDAR LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 121 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180

Query: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKL 240
           ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEK 
Sbjct: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRFGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNR GGQASRNVSYGSVFQRQSQRIP
Sbjct: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300

Query: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 360
           SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL
Sbjct: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 360

Query: 361 NMTVQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEAEDAPEI 401
           NMTVQRDQGVGSQT+EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQE EDAP++
Sbjct: 361 NMTVQRDQGVGSQTIEQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDV 420

[Close]

BLAST of Pay0016664 vs. ExPASy TrEMBL
Match: A0A5D3BS67 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold509G00050 PE=4 SV=1)

HSP 1 Score: 768.1 bits (1982), Expect = 1.9e-218
Identity = 390/426 (91.55%), Postives = 395/426 (92.72%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQNGMQGPTQGPSVGESTEL--------------------------SDP 60
           MPPRTGRRRRQNQ+GMQGPTQGPSVGES+ L                          SDP
Sbjct: 39  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 98

Query: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 99  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 158

Query: 121 GWWKSILARRSDARGLDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDAR LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 159 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 218

Query: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKL 240
           ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEK 
Sbjct: 219 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 278

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRFGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNR GGQASRNVSYGSVFQRQSQRIP
Sbjct: 279 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 338

Query: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 360
           SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL
Sbjct: 339 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 398

Query: 361 NMTVQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEAEDAPEI 401
           NMTVQRDQGVGSQT+EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQE EDAP++
Sbjct: 399 NMTVQRDQGVGSQTIEQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDV 458

[Close]

BLAST of Pay0016664 vs. ExPASy TrEMBL
Match: A0A5D3BHI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold115G00450 PE=4 SV=1)

HSP 1 Score: 768.1 bits (1982), Expect = 1.9e-218
Identity = 390/426 (91.55%), Postives = 395/426 (92.72%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQNGMQGPTQGPSVGESTEL--------------------------SDP 60
           MPPRTGRRRRQNQ+GMQGPTQGPSVGES+ L                          SDP
Sbjct: 39  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 98

Query: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 99  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 158

Query: 121 GWWKSILARRSDARGLDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDAR LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 159 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 218

Query: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKL 240
           ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEK 
Sbjct: 219 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 278

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRFGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNR GGQASRNVSYGSVFQRQSQRIP
Sbjct: 279 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 338

Query: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 360
           SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL
Sbjct: 339 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 398

Query: 361 NMTVQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEAEDAPEI 401
           NMTVQRDQGVGSQT+EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQE EDAP++
Sbjct: 399 NMTVQRDQGVGSQTIEQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDV 458

[Close]

BLAST of Pay0016664 vs. ExPASy TrEMBL
Match: A0A5A7T1Y5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00980 PE=4 SV=1)

HSP 1 Score: 768.1 bits (1982), Expect = 1.9e-218
Identity = 390/426 (91.55%), Postives = 395/426 (92.72%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQNGMQGPTQGPSVGESTEL--------------------------SDP 60
           MPPRTGRRRRQNQ+GMQGPTQGPSVGES+ L                          SDP
Sbjct: 39  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 98

Query: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 99  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 158

Query: 121 GWWKSILARRSDARGLDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDAR LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 159 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 218

Query: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKL 240
           ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEK 
Sbjct: 219 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 278

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRFGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNR GGQASRNVSYGSVFQRQSQRIP
Sbjct: 279 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 338

Query: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 360
           SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL
Sbjct: 339 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 398

Query: 361 NMTVQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEAEDAPEI 401
           NMTVQRDQGVGSQT+EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQE EDAP++
Sbjct: 399 NMTVQRDQGVGSQTIEQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDV 458

[Close]

BLAST of Pay0016664 vs. ExPASy TrEMBL
Match: A0A5A7UNA3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold73G00100 PE=4 SV=1)

HSP 1 Score: 768.1 bits (1982), Expect = 1.9e-218
Identity = 390/426 (91.55%), Postives = 395/426 (92.72%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQNGMQGPTQGPSVGESTEL--------------------------SDP 60
           MPPRTGRRRRQNQ+GMQGPTQGPSVGES+ L                          SDP
Sbjct: 250 MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 309

Query: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 310 EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 369

Query: 121 GWWKSILARRSDARGLDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDAR LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 370 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 429

Query: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKL 240
           ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEK 
Sbjct: 430 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 489

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRFGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNR GGQASRNVSYGSVFQRQSQRIP
Sbjct: 490 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 549

Query: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 360
           SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL
Sbjct: 550 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 609

Query: 361 NMTVQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEAEDAPEI 401
           NMTVQRDQGVGSQT+EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQE EDAP++
Sbjct: 610 NMTVQRDQGVGSQTIEQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDV 669

[Close]

BLAST of Pay0016664 vs. NCBI nr
Match: KAA0066849.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 768.1 bits (1982), Expect = 3.9e-218
Identity = 390/426 (91.55%), Postives = 395/426 (92.72%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQNGMQGPTQGPSVGESTEL--------------------------SDP 60
           MPPRTGRRRRQNQ+GMQGPTQGPSVGES+ L                          SDP
Sbjct: 39  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 98

Query: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 99  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 158

Query: 121 GWWKSILARRSDARGLDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDAR LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 159 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 218

Query: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKL 240
           ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEK 
Sbjct: 219 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 278

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRFGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNR GGQASRNVSYGSVFQRQSQRIP
Sbjct: 279 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 338

Query: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 360
           SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL
Sbjct: 339 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 398

Query: 361 NMTVQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEAEDAPEI 401
           NMTVQRDQGVGSQT+EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQE EDAP++
Sbjct: 399 NMTVQRDQGVGSQTIEQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDV 458

[Close]

BLAST of Pay0016664 vs. NCBI nr
Match: KAA0035455.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK01987.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK03719.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK25877.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 768.1 bits (1982), Expect = 3.9e-218
Identity = 390/426 (91.55%), Postives = 395/426 (92.72%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQNGMQGPTQGPSVGESTEL--------------------------SDP 60
           MPPRTGRRRRQNQ+GMQGPTQGPSVGES+ L                          SDP
Sbjct: 39  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 98

Query: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 99  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 158

Query: 121 GWWKSILARRSDARGLDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDAR LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 159 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 218

Query: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKL 240
           ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEK 
Sbjct: 219 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 278

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRFGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNR GGQASRNVSYGSVFQRQSQRIP
Sbjct: 279 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 338

Query: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 360
           SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL
Sbjct: 339 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 398

Query: 361 NMTVQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEAEDAPEI 401
           NMTVQRDQGVGSQT+EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQE EDAP++
Sbjct: 399 NMTVQRDQGVGSQTIEQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDV 458

[Close]

BLAST of Pay0016664 vs. NCBI nr
Match: TYK06334.1 (putative polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 768.1 bits (1982), Expect = 3.9e-218
Identity = 390/426 (91.55%), Postives = 395/426 (92.72%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQNGMQGPTQGPSVGESTEL--------------------------SDP 60
           MPPRTGRRRRQNQ+GMQGPTQGPSVGES+ L                          SDP
Sbjct: 1   MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 60

Query: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120

Query: 121 GWWKSILARRSDARGLDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDAR LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 121 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180

Query: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKL 240
           ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEK 
Sbjct: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRFGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNR GGQASRNVSYGSVFQRQSQRIP
Sbjct: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300

Query: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 360
           SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL
Sbjct: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 360

Query: 361 NMTVQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEAEDAPEI 401
           NMTVQRDQGVGSQT+EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQE EDAP++
Sbjct: 361 NMTVQRDQGVGSQTIEQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDV 420

[Close]

BLAST of Pay0016664 vs. NCBI nr
Match: TYK27507.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 768.1 bits (1982), Expect = 3.9e-218
Identity = 390/426 (91.55%), Postives = 395/426 (92.72%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQNGMQGPTQGPSVGESTEL--------------------------SDP 60
           MPPRTGRRRRQNQ+GMQGPTQGPSVGES+ L                          SDP
Sbjct: 1   MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 60

Query: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120

Query: 121 GWWKSILARRSDARGLDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDAR LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 121 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180

Query: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKL 240
           ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEK 
Sbjct: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 240

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRFGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNR GGQASRNVSYGSVFQRQSQRIP
Sbjct: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 300

Query: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 360
           SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL
Sbjct: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 360

Query: 361 NMTVQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEAEDAPEI 401
           NMTVQRDQGVGSQT+EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQE EDAP++
Sbjct: 361 NMTVQRDQGVGSQTIEQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDV 420

[Close]

BLAST of Pay0016664 vs. NCBI nr
Match: KAA0056684.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 768.1 bits (1982), Expect = 3.9e-218
Identity = 390/426 (91.55%), Postives = 395/426 (92.72%), Query Frame = 0


Query: 1   MPPRTGRRRRQNQNGMQGPTQGPSVGESTEL--------------------------SDP 60
           MPPRTGRRRRQNQ+GMQGPTQGPSVGES+ L                          SDP
Sbjct: 250 MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 309

Query: 61  EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 120
           EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE
Sbjct: 310 EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQKEAE 369

Query: 121 GWWKSILARRSDARGLDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 180
           GWWKSILARRSDAR LDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT
Sbjct: 370 GWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYT 429

Query: 181 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKL 240
           ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEK 
Sbjct: 430 ELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 489

Query: 241 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRFGGQASRNVSYGSVFQRQSQRIP 300
           AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNR GGQASRNVSYGSVFQRQSQRIP
Sbjct: 490 AVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 549

Query: 301 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 360
           SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL
Sbjct: 550 SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQL 609

Query: 361 NMTVQRDQGVGSQTVEQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEAEDAPEI 401
           NMTVQRDQGVGSQT+EQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQE EDAP++
Sbjct: 610 NMTVQRDQGVGSQTIEQSRVSVVPTEGTSGARQKGVVGRPRQQGKVYAMTQQEVEDAPDV 669

The following BLAST results are available for this feature:

BLAST of Pay0016664 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0016664 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U2V7	1.9e-218	91.55	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5D3BS67	1.9e-218	91.55	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold50...	[more]
A0A5D3BHI1	1.9e-218	91.55	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7T1Y5	1.9e-218	91.55	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold43...	[more]
A0A5A7UNA3	1.9e-218	91.55	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold73...	[more]

BLAST of Pay0016664 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0066849.1	3.9e-218	91.55	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0035455.1	3.9e-218	91.55	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1...	[more]
TYK06334.1	3.9e-218	91.55	putative polyprotein [Cucumis melo var. makuwa]	[more]
TYK27507.1	3.9e-218	91.55	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0056684.1	3.9e-218	91.55	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]

BLAST of Pay0016664 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 317..333 e-value: 8.9E-6 score: 35.2
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 317..333 e-value: 2.0E-7 score: 30.8
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 318..333 score: 11.465827
None	No IPR available	GENE3D	4.10.60.10		coord: 314..379 e-value: 7.1E-8 score: 34.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 268..290
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..28
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 54..333
None	No IPR available	PANTHER	PTHR34482:SF4	POLYMERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 54..333
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 84..179 e-value: 1.1E-13 score: 51.2
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 302..334

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0016664.1	Pay0016664.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding